Psyllid ID: psy7798

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-
Protein Sequence
MALPEEQAEQYYENYKSKSYKDEEFEQFEKKVDNISRLIANFSNKDKNIAAAAMREAKLLLEDNQHEDKEARVTHELVSKNTDKLVIRNLCHIMISLPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFEKR
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHccccccHHHHHHHccccccccEEEEEcccccccHHHHHHcccccccccccccHHHHHHHHHHcccccccEEEEcccccccccccEEEEEHHHHcccccccEEEEEEEccccccEEEEEEEEEEcccccHHHHccccccccccccccccccEEEEEEcccccccccccEEEEEccccccccccccccccccccHHccccccccccEEcccccccEEEccccccccEEEEEccccEEEEEEcccEEcc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHcccccccHHHHHHHHHHHHccHHHEEEcccccHHHHHHHHHHHHHHHcccccccHHccHHHHHHccccccEEEEccHHHHHcccccEEEEEEEEcccccccEEEEEEEccccccEEEEEEEEEEEcHHHHHHHHcccccccccEccccEEEEEEEEEcccccccccccEEEEcccccccccHHHHccccccccccHHHHcccccccEcccccEEEEEcccEEEEcccccEEEEEEEEEEEEEcHccc
Coil and Loop (DISEMBL)
MALPEEQAEQYYENyksksykdeEFEQFEKKVDNISRLIANFSNKDKNIAAAAMREAKLLLEDNQHEDKEARVTHELVSKNTDKLVIRNLCHIMISLPQVIECKAAvawepkkplsletiqvappkageVRIKIVSTAichtdaytldgldsegkfpcvlghegsgivesvgegvtsvapgdhviplyipqcneckfckssktnlctkirttqlfltsnvtisdfnmgysmtgslergskrdnsfqTTHFAVIkrrdfekr
Flexible Loop (DISEMBL)
malpeeqaeqyyenyksksykdEEFEQFEKKVDNISRLIANFSNKDKNIAAAAMREAKLLLEDNQHEDKEArvthelvskntdkLVIRNLCHIMISLPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRttqlfltsnvtisdfNMGYSMTGSlergskrdnsfqtthfavikrrdfekr
Low Complexity Region (SEG)
MALPEEQAEQYYENYKSKSYKDEEFEQFEKKVDNISRLIANFSNKDKNIAAAAMREAKLLLEDNQHEDKEARVTHELVSKNTDKLVIRNLCHIMISLPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHegsgivesvgegvtsvAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFEKR
Disordered region (IsUnstruct)
*********************************NISRLIANF*********************************ELVSKNTDKLVIRNLCHIMISLPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSM******************************
Disordered Region (DISOPRED)
************************FEQFEKKVDNISRLIANFSNKDKNIAAAAMREAKLLLEDNQHEDKEARVTHELVSKNTDKLVIRNLCHIMISLPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFEKR
Disordered Region (DISEMBL)
********EQYYENYKSKSYKDEEFEQFEKKVDNISRLIANFSNKDKNIAAAAMREAKLLLEDNQHEDKEARVTHELVSKNTDKLVIRNLCHIMISLPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFEKR
Disordered Region (DISPRO)
*ALPEEQAEQYYENYKSKSYKDEEFEQFEKKVDNISRLIANFSNKDKNIAAAAMREAKLLLEDNQHEDKEARVTHELVSKNTDKLVIRNLCHIMISLPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFE**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALPEEQAEQYYENYKSKSYKDEExxxxxxxxxxxxxxxxxxxxxDKNIAAAAMREAKLLLEDNQHEDKEARVTHELVSKNTDKLVIRNLCHIMISLPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFEKR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	261	2.2.26 [Sep-21-2011]
Q17335	384	Alcohol dehydrogenase cla	yes	N/A	0.440	0.299	0.773	1e-49
P80360	376	Alcohol dehydrogenase cla	N/A	N/A	0.440	0.305	0.773	1e-48
P81600	375	Alcohol dehydrogenase cla	N/A	N/A	0.440	0.306	0.739	1e-47
P46415	379	Alcohol dehydrogenase cla	yes	N/A	0.440	0.303	0.765	1e-47
P80467	373	Alcohol dehydrogenase cla	N/A	N/A	0.436	0.305	0.754	2e-47
P28474	374	Alcohol dehydrogenase cla	yes	N/A	0.440	0.307	0.756	6e-47
P81601	375	Alcohol dehydrogenase cla	N/A	N/A	0.452	0.314	0.720	8e-47
P81431	378	Alcohol dehydrogenase cla	N/A	N/A	0.432	0.298	0.725	8e-47
Q3ZC42	374	Alcohol dehydrogenase cla	yes	N/A	0.440	0.307	0.739	9e-47
P12711	374	Alcohol dehydrogenase cla	yes	N/A	0.440	0.307	0.747	1e-46

>sp|Q17335|ADHX_CAEEL Alcohol dehydrogenase class-3 OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1

 Score =  196 bits (499), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 89/115 (77%), Positives = 99/115 (86%)

Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           QVI CKAAVAW  K PLS+ETIQVAPPKA EVR+KI+ TA+CHTDAYTLDG D EG FP 
Sbjct: 7   QVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEGLFPV 66

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           VLGHEGSGIVESVGEGVT  APGDHV+PLY+PQC EC++CK+ KTNLC KIR +Q
Sbjct: 67  VLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQ 121

Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione.
Caenorhabditis elegans (taxid: 6239)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 8EC: 4

>sp|P80360|ADHX_MYXGL Alcohol dehydrogenase class-3 OS=Myxine glutinosa PE=1 SV=1

 Score =  193 bits (490), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 89/115 (77%), Positives = 98/115 (85%)

Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           QVI CKAAVAWE KKPLSLE I+VAPPKA EVR+K+++TA+CHTDAYTL G+D EG FP 
Sbjct: 6   QVIHCKAAVAWEAKKPLSLEEIEVAPPKAHEVRMKVLATAVCHTDAYTLSGVDPEGSFPV 65

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           VLGHEG+GIVESVGEGVT   PGD VIPLYIPQC ECKFC + KTNLC KIR TQ
Sbjct: 66  VLGHEGAGIVESVGEGVTKFKPGDSVIPLYIPQCGECKFCLNPKTNLCQKIRVTQ 120

Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione.

Myxine glutinosa (taxid: 7769)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|P81600|ADHH_GADMO Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1

 Score =  190 bits (482), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 85/115 (73%), Positives = 97/115 (84%)

Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           QVI+CKAAVAWE  KPLSLE ++VAPP+AGEVRIK+V+T +CHTDAYTL G D EG FP 
Sbjct: 5   QVIKCKAAVAWEAGKPLSLEEVEVAPPRAGEVRIKVVATGVCHTDAYTLSGSDPEGAFPV 64

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           +LGHEG+G+VESVGEGVT    GD VIPLY+PQC ECKFCK+ KTNLC KIR TQ
Sbjct: 65  ILGHEGAGLVESVGEGVTKFKAGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQ 119

Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione.

Gadus morhua (taxid: 8049)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|P46415|ADHX_DROME Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3

 Score =  190 bits (482), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 88/115 (76%), Positives = 96/115 (83%)

Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI CKAAVAWE KKPL +E I+VAPPKA EVRIKI +T +CHTDA+TL G D EG FP 
Sbjct: 7   KVITCKAAVAWEAKKPLVIEDIEVAPPKAHEVRIKITATGVCHTDAFTLSGADPEGLFPV 66

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           VLGHEG+GIVESVGEGVT+   GDHVI LYIPQCNECKFCKS KTNLC KIR TQ
Sbjct: 67  VLGHEGAGIVESVGEGVTNFKAGDHVIALYIPQCNECKFCKSGKTNLCQKIRLTQ 121

Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione.

Drosophila melanogaster (taxid: 7227)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|P80467|ADHX_UROHA Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1

 Score =  189 bits (479), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 86/114 (75%), Positives = 96/114 (84%)

Query: 100 VIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCV 159
           VI+CKAAVAWE  KPLS+E I+VAPPKA EVR+KI++TA+CHTDAYTL G D EG FP +
Sbjct: 4   VIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRVKIIATAVCHTDAYTLSGADPEGSFPVI 63

Query: 160 LGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           LGHEG+GIVESVGEGVT   PGD VIPLYIPQC ECKFC + KTNLC KIR TQ
Sbjct: 64  LGHEGAGIVESVGEGVTKFKPGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQ 117

Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione.

Uromastyx hardwickii (taxid: 40250)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|P28474|ADHX_MOUSE Alcohol dehydrogenase class-3 OS=Mus musculus GN=Adh5 PE=1 SV=3

 Score =  187 bits (475), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 87/115 (75%), Positives = 96/115 (83%)

Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           QVI CKAAVAWE  KPLS+E I+VAPPKA EVRIKI++TA+CHTDAYTL G D EG FP 
Sbjct: 4   QVIRCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKILATAVCHTDAYTLSGADPEGCFPV 63

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           +LGHEG+GIVESVGEGVT +  GD VIPLYIPQC ECKFC + KTNLC KIR TQ
Sbjct: 64  ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQ 118

Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|P81601|ADHL_GADMO Alcohol dehydrogenase class-3 chain L OS=Gadus morhua PE=1 SV=1

 Score =  187 bits (474), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 85/118 (72%), Positives = 97/118 (82%)

Query: 96  SLPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGK 155
           ++ + I C+AAVAWE  KPLS+E ++VAPP+AGEVRIKIV+T ICHTDAYTL G D EG 
Sbjct: 2   TVGKTIRCRAAVAWEAGKPLSMEEVEVAPPQAGEVRIKIVATGICHTDAYTLSGSDPEGV 61

Query: 156 FPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           FP VLGHEG+GIVESVGEGVT    GD VIPLY+PQC ECKFCK+ KTNLC KIR TQ
Sbjct: 62  FPSVLGHEGAGIVESVGEGVTKFKSGDAVIPLYVPQCGECKFCKNPKTNLCQKIRLTQ 119

Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione.

Gadus morhua (taxid: 8049)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|P81431|ADHX_OCTVU Alcohol dehydrogenase class-3 OS=Octopus vulgaris PE=1 SV=1

 Score =  187 bits (474), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 82/113 (72%), Positives = 98/113 (86%)

Query: 101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVL 160
           I+C AA+AWE KKPLS+E ++VAPPK+GEVRIKI+ + +CHTDAYTL+G+D EG FP +L
Sbjct: 8   IKCMAAIAWEAKKPLSIEEVEVAPPKSGEVRIKILHSGVCHTDAYTLEGIDPEGIFPVIL 67

Query: 161 GHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           GHEG+GIVES+GEGVTSV PGD VIPLY+PQC ECKFC + KTNLC KIR TQ
Sbjct: 68  GHEGAGIVESIGEGVTSVKPGDTVIPLYVPQCYECKFCLNPKTNLCQKIRVTQ 120

Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione.

Octopus vulgaris (taxid: 6645)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|Q3ZC42|ADHX_BOVIN Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH5 PE=2 SV=1

 Score =  187 bits (474), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 85/115 (73%), Positives = 97/115 (84%)

Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           QVI+CKAAVAWE  KPLS+E ++VAPPKA EVRIKI++TA+CHTDAYTL G D EG +P 
Sbjct: 4   QVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGNYPV 63

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           +LGHEG+GIVESVGEGVT +  GD VIPLYIPQC ECKFC + KTNLC KIR TQ
Sbjct: 64  ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQ 118

Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|P12711|ADHX_RAT Alcohol dehydrogenase class-3 OS=Rattus norvegicus GN=Adh5 PE=1 SV=2

 Score =  186 bits (473), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 86/115 (74%), Positives = 96/115 (83%)

Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           QVI CKAAVAWE  KPLS+E I+VAPP+A EVRIKI++TA+CHTDAYTL G D EG FP 
Sbjct: 4   QVIRCKAAVAWEAGKPLSIEEIEVAPPQAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 63

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           +LGHEG+GIVESVGEGVT +  GD VIPLYIPQC ECKFC + KTNLC KIR TQ
Sbjct: 64  ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQ 118

Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	261
383855065	377	PREDICTED: alcohol dehydrogenase class-3	0.440	0.305	0.808	3e-50
321471995	377	hypothetical protein DAPPUDRAFT_230717 [	0.452	0.312	0.771	9e-50
158293133	351	AGAP010499-PA [Anopheles gambiae str. PE	0.429	0.319	0.794	2e-49
332018981	377	Alcohol dehydrogenase class-3 [Acromyrme	0.440	0.305	0.791	2e-49
405972460	373	Alcohol dehydrogenase class-3 [Crassostr	0.440	0.308	0.765	3e-49
157113462	375	alcohol dehydrogenase [Aedes aegypti] gi	0.440	0.306	0.782	5e-49
126697482	271	alcohol dehydrogenase [Haliotis discus d	0.452	0.435	0.745	5e-49
380015521	377	PREDICTED: alcohol dehydrogenase class-3	0.440	0.305	0.791	1e-48
8132343	377	alcohol dehydrogenase class 3 [Branchios	0.432	0.299	0.769	2e-48
170045704	377	alcohol dehydrogenase class 3 [Culex qui	0.440	0.305	0.773	2e-48

>gi|383855065|ref|XP_003703039.1| PREDICTED: alcohol dehydrogenase class-3-like [Megachile rotundata]

 Score =  204 bits (519), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 93/115 (80%), Positives = 102/115 (88%)

Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAVAWE KKPLSLE ++VAPPKA EVRIK+VS A+CHTDAYTLDGLD EG FPC
Sbjct: 7   KVIKCKAAVAWEAKKPLSLEEVEVAPPKAHEVRIKVVSVALCHTDAYTLDGLDPEGVFPC 66

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           +LGHEGSGIVESVGEGVT   PGDHVIPLYIPQC +CKFC S KTNLC+KIR TQ
Sbjct: 67  ILGHEGSGIVESVGEGVTEFQPGDHVIPLYIPQCGDCKFCNSPKTNLCSKIRATQ 121

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321471995|gb|EFX82966.1| hypothetical protein DAPPUDRAFT_230717 [Daphnia pulex]

 Score =  202 bits (515), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 91/118 (77%), Positives = 103/118 (87%)

Query: 96  SLPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGK 155
           ++ + I C+AAVAW  K+PLSLETI+VAPP+AGEVRIKIV+T +CHTDAYTLDG D EG 
Sbjct: 4   TIGKTITCRAAVAWAAKEPLSLETIEVAPPQAGEVRIKIVATGVCHTDAYTLDGHDPEGI 63

Query: 156 FPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           FPC+LGHEG GIVESVGEGVTSV+PGDHVIPLY PQC +CKFCKS KTNLC KIR TQ
Sbjct: 64  FPCILGHEGGGIVESVGEGVTSVSPGDHVIPLYTPQCYDCKFCKSPKTNLCVKIRATQ 121

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158293133|ref|XP_314472.4| AGAP010499-PA [Anopheles gambiae str. PEST] gi|157016812|gb|EAA09898.4| AGAP010499-PA [Anopheles gambiae str. PEST]

 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 89/112 (79%), Positives = 101/112 (90%)

Query: 98  PQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFP 157
           PQVI+CKAAVAWEPK+PLS+ETI+VAPPKAGEVRIK+ ++ +CHTDAYTL GLDSEG FP
Sbjct: 3   PQVIKCKAAVAWEPKQPLSIETIEVAPPKAGEVRIKVTASGVCHTDAYTLGGLDSEGVFP 62

Query: 158 CVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKI 209
            +LGHEG+G+VESVGEGVT   PGDHVIPLYIPQC EC+FCKS KTNLC KI
Sbjct: 63  VILGHEGAGVVESVGEGVTKFQPGDHVIPLYIPQCFECRFCKSPKTNLCPKI 114

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332018981|gb|EGI59520.1| Alcohol dehydrogenase class-3 [Acromyrmex echinatior]

 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 91/115 (79%), Positives = 103/115 (89%)

Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAVAW+ K+PLSLE I+VAPPKA EVRIK+V+ A+CHTDAYTLDGLD EG FPC
Sbjct: 7   KVIKCKAAVAWKQKEPLSLEEIEVAPPKAHEVRIKVVAVALCHTDAYTLDGLDPEGAFPC 66

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           +LGHEGSGIVESVGEGVT   PGDHV+PLYIPQC +CKFCKS KTNLC+KIR TQ
Sbjct: 67  ILGHEGSGIVESVGEGVTEFQPGDHVVPLYIPQCGDCKFCKSPKTNLCSKIRETQ 121

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|405972460|gb|EKC37227.1| Alcohol dehydrogenase class-3 [Crassostrea gigas]

 Score =  201 bits (510), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 88/115 (76%), Positives = 100/115 (86%)

Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI C+AAVAWE KKPL+LET++V PP+AGEVRIK++ T +CHTDAY LDG D EG FP 
Sbjct: 7   KVITCQAAVAWEAKKPLTLETVEVEPPRAGEVRIKVLYTGVCHTDAYLLDGFDPEGAFPI 66

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           ++GHEG G+VESVGEGVTSV PGDHVIPLYIPQCNECKFCKS KTNLC KIR TQ
Sbjct: 67  IMGHEGGGVVESVGEGVTSVQPGDHVIPLYIPQCNECKFCKSPKTNLCGKIRATQ 121

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|157113462|ref|XP_001657840.1| alcohol dehydrogenase [Aedes aegypti] gi|108877727|gb|EAT41952.1| AAEL006458-PA [Aedes aegypti]

 Score =  200 bits (509), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 90/115 (78%), Positives = 101/115 (87%)

Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI CKAAVAWE KKPLS+ET++VAPPKAGEVR+KI ++ +CHTDAYTLDG DSEG FP 
Sbjct: 5   EVISCKAAVAWEAKKPLSIETVEVAPPKAGEVRVKITASGVCHTDAYTLDGHDSEGIFPV 64

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           +LGHEG+GIVESVGEGVT   PGDHVIPLYIPQC ECK+CKS KTNLC KIR TQ
Sbjct: 65  ILGHEGAGIVESVGEGVTKFKPGDHVIPLYIPQCFECKYCKSPKTNLCPKIRATQ 119

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|126697482|gb|ABO26698.1| alcohol dehydrogenase [Haliotis discus discus]

 Score =  200 bits (508), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 88/118 (74%), Positives = 104/118 (88%)

Query: 96  SLPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGK 155
           ++ + I CKAAVAWE KKPL++ETI+VAPPKAGEVR+K+++T +CHTDAYTLDG D EG 
Sbjct: 4   TVGKTITCKAAVAWEAKKPLTMETIEVAPPKAGEVRVKVLATGVCHTDAYTLDGFDPEGL 63

Query: 156 FPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           FP VLGHEG GIVESVGEGVT+V PGDHVIP YIPQC +CKFCKS+K NLC+KIR+TQ
Sbjct: 64  FPVVLGHEGGGIVESVGEGVTTVKPGDHVIPCYIPQCYDCKFCKSTKINLCSKIRSTQ 121

Source: Haliotis discus discus

Species: Haliotis discus

Genus: Haliotis

Family: Haliotidae

Class: Gastropoda

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|380015521|ref|XP_003691749.1| PREDICTED: alcohol dehydrogenase class-3-like [Apis florea]

 Score =  199 bits (505), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 91/115 (79%), Positives = 102/115 (88%)

Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAVAW+ K+PLSLE I+VAPPKA EVRIKI+  A+CHTDAYTLDGLD EG FPC
Sbjct: 7   KVIKCKAAVAWKEKQPLSLEEIEVAPPKAHEVRIKIIFVALCHTDAYTLDGLDPEGIFPC 66

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           +LGHEGSGIVESVGE VT   PGDHVIPLY+PQC +CKFCKS KTNLC+KIRTTQ
Sbjct: 67  ILGHEGSGIVESVGEEVTEFQPGDHVIPLYVPQCGDCKFCKSPKTNLCSKIRTTQ 121

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|8132343|gb|AAF73255.1|AF156708_1 alcohol dehydrogenase class 3 [Branchiostoma lanceolatum]

 Score =  198 bits (503), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 87/113 (76%), Positives = 98/113 (86%)

Query: 101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVL 160
           I C+AAVAWE KKPL +ETI+VAPP+A EVRIK+++T +CHTDAYTLDG DSEGKFP VL
Sbjct: 9   ITCRAAVAWEAKKPLVIETIEVAPPRAHEVRIKVLATGVCHTDAYTLDGFDSEGKFPVVL 68

Query: 161 GHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           GHEG G+VESVGEGV+   PGDHVIPLY+PQC ECKFCKS KTNLC KIR TQ
Sbjct: 69  GHEGGGVVESVGEGVSGFKPGDHVIPLYVPQCKECKFCKSPKTNLCQKIRVTQ 121

Source: Branchiostoma lanceolatum

Species: Branchiostoma lanceolatum

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|170045704|ref|XP_001850438.1| alcohol dehydrogenase class 3 [Culex quinquefasciatus] gi|167868648|gb|EDS32031.1| alcohol dehydrogenase class 3 [Culex quinquefasciatus]

 Score =  198 bits (503), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 89/115 (77%), Positives = 101/115 (87%)

Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI C+AAVAWEPKKPLS+ETI+VAPP +GEVRIK+V++ +CHTDAYTLDG D+EG FP 
Sbjct: 7   KVISCRAAVAWEPKKPLSIETIEVAPPNSGEVRIKVVASGVCHTDAYTLDGHDAEGVFPV 66

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           +LGHEG+GIVESVGEGVT    GDHVIPLYIPQC ECKFCKS KTNLC KIR TQ
Sbjct: 67  ILGHEGAGIVESVGEGVTKFREGDHVIPLYIPQCFECKFCKSPKTNLCPKIRATQ 121

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	261
WB|WBGene00019240	384	H24K24.3 [Caenorhabditis elega	0.440	0.299	0.652	2.6e-38
UNIPROTKB|Q17335	384	H24K24.3 "Alcohol dehydrogenas	0.440	0.299	0.652	2.6e-38
UNIPROTKB|F1NKS5	374	ADH5 "Uncharacterized protein"	0.436	0.304	0.649	8e-37
FB|FBgn0011768	379	Fdh "Formaldehyde dehydrogenas	0.440	0.303	0.652	1.3e-36
UNIPROTKB|F1NI89	370	ADH5 "Uncharacterized protein"	0.436	0.308	0.649	1.3e-36
UNIPROTKB|F1NKS6	362	ADH5 "Uncharacterized protein"	0.436	0.314	0.649	1.3e-36
UNIPROTKB|F1S0C1	374	ADH5 "Uncharacterized protein"	0.440	0.307	0.643	1.7e-36
UNIPROTKB|F1PLM5	376	F1PLM5 "Uncharacterized protei	0.440	0.305	0.634	2.1e-36
UNIPROTKB|J9PA83	374	ADH5 "Uncharacterized protein"	0.440	0.307	0.634	2.1e-36
UNIPROTKB|Q3ZC42	374	ADH5 "Alcohol dehydrogenase cl	0.440	0.307	0.626	4.4e-36

WB|WBGene00019240 H24K24.3 [Caenorhabditis elegans (taxid:6239)]

 Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
 Identities = 75/115 (65%), Positives = 85/115 (73%)

Query:    99 QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
             QVI CKAAVAW  K PLS+ETIQVAPPKA EVR+KI+ TA+CHTDAYTLDG D EG FP 
Sbjct:     7 QVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEGLFPV 66

Query:   159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
             VLGH                APGDHV+PLY+PQC EC++CK+ KTNLC KIR +Q
Sbjct:    67 VLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQ 121

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

UNIPROTKB|Q17335 H24K24.3 "Alcohol dehydrogenase class-3" [Caenorhabditis elegans (taxid:6239)]

 Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
 Identities = 75/115 (65%), Positives = 85/115 (73%)

Query:    99 QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
             QVI CKAAVAW  K PLS+ETIQVAPPKA EVR+KI+ TA+CHTDAYTLDG D EG FP 
Sbjct:     7 QVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEGLFPV 66

Query:   159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
             VLGH                APGDHV+PLY+PQC EC++CK+ KTNLC KIR +Q
Sbjct:    67 VLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQ 121

GO:0005737 "cytoplasm" evidence=NAS

GO:0006066 "alcohol metabolic process" evidence=NAS

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=NAS

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=NAS

UNIPROTKB|F1NKS5 ADH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
 Identities = 74/114 (64%), Positives = 83/114 (72%)

Query:   100 VIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCV 159
             VI+CKAAVAWE  KPLS+E ++VAPPKA EVRIKIV+TA+CHTDAYTL G D EG FP +
Sbjct:     5 VIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIVATALCHTDAYTLSGADPEGCFPVI 64

Query:   160 LGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
             LGH                 PGD VIPLYIPQC ECK+CK+ KTNLC KIR TQ
Sbjct:    65 LGHEGAGIVESVGEGVTKVKPGDTVIPLYIPQCGECKYCKNPKTNLCQKIRVTQ 118

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0051775 "response to redox state" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

FB|FBgn0011768 Fdh "Formaldehyde dehydrogenase" [Drosophila melanogaster (taxid:7227)]

 Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 75/115 (65%), Positives = 81/115 (70%)

Query:    99 QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
             +VI CKAAVAWE KKPL +E I+VAPPKA EVRIKI +T +CHTDA+TL G D EG FP 
Sbjct:     7 KVITCKAAVAWEAKKPLVIEDIEVAPPKAHEVRIKITATGVCHTDAFTLSGADPEGLFPV 66

Query:   159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
             VLGH                  GDHVI LYIPQCNECKFCKS KTNLC KIR TQ
Sbjct:    67 VLGHEGAGIVESVGEGVTNFKAGDHVIALYIPQCNECKFCKSGKTNLCQKIRLTQ 121

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IDA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IDA

GO:0004552 "octanol dehydrogenase activity" evidence=IDA

GO:0006066 "alcohol metabolic process" evidence=IC

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0080164 "regulation of nitric oxide metabolic process" evidence=IC

GO:0008542 "visual learning" evidence=IMP

GO:0080007 "S-nitrosoglutathione reductase activity" evidence=IMP

GO:2000169 "regulation of peptidyl-cysteine S-nitrosylation" evidence=IMP

UNIPROTKB|F1NI89 ADH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 74/114 (64%), Positives = 83/114 (72%)

Query:   100 VIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCV 159
             VI+CKAAVAWE  KPLS+E ++VAPPKA EVRIKIV+TA+CHTDAYTL G D EG FP +
Sbjct:     1 VIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIVATALCHTDAYTLSGADPEGCFPVI 60

Query:   160 LGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
             LGH                 PGD VIPLYIPQC ECK+CK+ KTNLC KIR TQ
Sbjct:    61 LGHEGAGIVESVGEGVTKVKPGDTVIPLYIPQCGECKYCKNPKTNLCQKIRFTQ 114

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

UNIPROTKB|F1NKS6 ADH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 74/114 (64%), Positives = 83/114 (72%)

Query:   100 VIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCV 159
             VI+CKAAVAWE  KPLS+E ++VAPPKA EVRIKIV+TA+CHTDAYTL G D EG FP +
Sbjct:     1 VIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIVATALCHTDAYTLSGADPEGCFPVI 60

Query:   160 LGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
             LGH                 PGD VIPLYIPQC ECK+CK+ KTNLC KIR TQ
Sbjct:    61 LGHEGAGIVESVGEGVTKVKPGDTVIPLYIPQCGECKYCKNPKTNLCQKIRFTQ 114

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

UNIPROTKB|F1S0C1 ADH5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 74/115 (64%), Positives = 82/115 (71%)

Query:    99 QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
             QVI+CKAAVAWE  KPLS+E I+VAPPKA EVRIKI++TA+CHTDAYTL G D EG FP 
Sbjct:     4 QVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 63

Query:   159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
             +LGH                  GD VIPLYIPQC ECKFC + KTNLC KIR TQ
Sbjct:    64 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQ 118

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0051775 "response to redox state" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1PLM5 F1PLM5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 73/115 (63%), Positives = 82/115 (71%)

Query:    99 QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
             QVI+CKAAVAWE  KPLS+E ++VAPPKA EVRIKI++TA+CHTDAYTL G D EG FP 
Sbjct:     6 QVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 65

Query:   159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
             +LGH                  GD VIPLYIPQC ECKFC + KTNLC KIR TQ
Sbjct:    66 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQ 120

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|J9PA83 ADH5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 73/115 (63%), Positives = 82/115 (71%)

Query:    99 QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
             QVI+CKAAVAWE  KPLS+E ++VAPPKA EVRIKI++TA+CHTDAYTL G D EG FP 
Sbjct:     4 QVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 63

Query:   159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
             +LGH                  GD VIPLYIPQC ECKFC + KTNLC KIR TQ
Sbjct:    64 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQ 118

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q3ZC42 ADH5 "Alcohol dehydrogenase class-3" [Bos taurus (taxid:9913)]

 Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
 Identities = 72/115 (62%), Positives = 82/115 (71%)

Query:    99 QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
             QVI+CKAAVAWE  KPLS+E ++VAPPKA EVRIKI++TA+CHTDAYTL G D EG +P 
Sbjct:     4 QVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGNYPV 63

Query:   159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
             +LGH                  GD VIPLYIPQC ECKFC + KTNLC KIR TQ
Sbjct:    64 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQ 118

GO:0051775 "response to redox state" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q96533	ADHX_ARATH	1, ., 1, ., 1, ., 2, 8, 4	0.7033	0.4521	0.3113	yes	N/A
P19854	ADHX_HORSE	1, ., 1, ., 1, ., 2, 8, 4	0.7304	0.4406	0.3074	yes	N/A
P12711	ADHX_RAT	1, ., 1, ., 1, ., 2, 8, 4	0.7478	0.4406	0.3074	yes	N/A
O74685	FADH_PICPA	1, ., 1, ., 1, ., -	0.65	0.4597	0.3166	yes	N/A
P78870	FADH1_SCHPO	1, ., 1, ., 1, ., -	0.7130	0.4406	0.3042	yes	N/A
Q0DWH1	ADHX_ORYSJ	1, ., 1, ., 1, ., 2, 8, 4	0.7053	0.4291	0.2939	yes	N/A
O19053	ADHX_RABIT	1, ., 1, ., 1, ., 2, 8, 4	0.7478	0.4406	0.3074	yes	N/A
Q17335	ADHX_CAEEL	1, ., 1, ., 1, ., 2, 8, 4	0.7739	0.4406	0.2994	yes	N/A
Q3ZC42	ADHX_BOVIN	1, ., 1, ., 1, ., 2, 8, 4	0.7391	0.4406	0.3074	yes	N/A
P46415	ADHX_DROME	1, ., 1, ., 1, ., 2, 8, 4	0.7652	0.4406	0.3034	yes	N/A
P11766	ADHX_HUMAN	1, ., 1, ., 1, ., 2, 8, 4	0.7478	0.4406	0.3074	yes	N/A
P32771	FADH_YEAST	1, ., 1, ., 1, ., -	0.6814	0.4329	0.2927	yes	N/A
P28474	ADHX_MOUSE	1, ., 1, ., 1, ., 2, 8, 4	0.7565	0.4406	0.3074	yes	N/A
Q54TC2	ADHX_DICDI	1, ., 1, ., 1, ., 2, 8, 4	0.7304	0.4406	0.3034	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	261
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	6e-86
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	2e-66
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	2e-62
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	3e-59
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	2e-58
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	7e-57
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	5e-56
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	5e-46
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	3e-44
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	3e-38
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	4e-38
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	5e-35
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	1e-33
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	7e-31
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	1e-30
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	3e-29
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	5e-29
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	7e-26
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	4e-25
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	6e-25
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	3e-24
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	4e-24
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	5e-24
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	1e-23
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	4e-23
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	4e-22
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	4e-22
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	1e-21
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	2e-21
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	3e-21
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	4e-21
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	5e-21
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	1e-20
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	7e-20
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	1e-19
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	2e-19
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	2e-18
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	9e-18
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	9e-18
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	4e-17
cd05281	341	cd05281, TDH, Threonine dehydrogenase	5e-17
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	1e-16
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	1e-16
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	2e-16
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	2e-16
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	3e-16
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	8e-16
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	9e-16
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	1e-15
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	5e-15
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	6e-15
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	8e-15
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	4e-14
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	5e-14
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	6e-14
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	7e-14
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	1e-13
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	1e-13
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	2e-13
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	2e-13
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	7e-13
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	2e-12
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	2e-12
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	3e-12
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	5e-12
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	7e-11
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	7e-11
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	3e-10
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	8e-10
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	1e-09
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	1e-09
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	2e-09
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	2e-09
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	3e-09
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	4e-09
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	4e-09
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	5e-09
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	5e-09
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	6e-09
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	8e-09
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	1e-08
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	2e-08
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	2e-08
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	3e-08
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	3e-08
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	4e-08
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	1e-07
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	3e-07
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	9e-07
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	1e-06
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	3e-06
smart00829	287	smart00829, PKS_ER, Enoylreductase	4e-06
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	7e-06
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	1e-05
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	2e-05
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	3e-05
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	4e-05
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	2e-04
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	0.001
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	0.002
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	0.003
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	0.004

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score =  260 bits (666), Expect = 6e-86
 Identities = 88/113 (77%), Positives = 97/113 (85%)

Query: 101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVL 160
           I CKAAVAWE  KPLS+E ++VAPPKAGEVRIKI++T +CHTDAYTL G D EG FP +L
Sbjct: 1   ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVIL 60

Query: 161 GHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           GHEG+GIVESVGEGVTSV PGDHVIPLY P+C ECKFCKS KTNLC KIR TQ
Sbjct: 61  GHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQ 113

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  210 bits (536), Expect = 2e-66
 Identities = 70/114 (61%), Positives = 87/114 (76%), Gaps = 1/114 (0%)

Query: 101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVL 160
           ++ +AAVA E  KPL +E + + PP+AGEV ++I +T +CHTDA+TL G D EG FP VL
Sbjct: 1   MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVL 59

Query: 161 GHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQL 214
           GHEG+GIVE+VGEGVTSV PGDHVI L+ P+C +CKFC S K NLC  IR TQ 
Sbjct: 60  GHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQG 113

Length = 366

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score =  200 bits (510), Expect = 2e-62
 Identities = 68/112 (60%), Positives = 86/112 (76%), Gaps = 1/112 (0%)

Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAV WEPKKP S+E I+VAPPKA EVRIKIV+T IC +D + + G      FP 
Sbjct: 4   KVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGK-LVTPFPV 62

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIR 210
           +LGHE +GIVESVGEGVT+V PGD VIPL++PQC +C+ C + ++NLC K  
Sbjct: 63  ILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKND 114

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  191 bits (488), Expect = 3e-59
 Identities = 70/112 (62%), Positives = 87/112 (77%), Gaps = 1/112 (0%)

Query: 101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVL 160
           I+CKAAVAWE  KPL +E I+VAPPKA EVRIK+++T++CHTD   ++G  +   FP +L
Sbjct: 1   IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVIL 59

Query: 161 GHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTT 212
           GHEG+GIVESVGEGVT++ PGD VIPL+I QC EC  C+S KTNLC K R  
Sbjct: 60  GHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRAN 111

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score =  189 bits (482), Expect = 2e-58
 Identities = 69/110 (62%), Positives = 84/110 (76%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHE 163
           +AAVAW   +PL +E + V  P+ GEV ++IV+T +CHTDA+TL G D EG FP +LGHE
Sbjct: 3   RAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHE 62

Query: 164 GSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           G+GIVE+VGEGVTSV  GDHVIPLY  +C ECKFC S KTNLC  +R TQ
Sbjct: 63  GAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQ 112

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score =  185 bits (472), Expect = 7e-57
 Identities = 66/124 (53%), Positives = 86/124 (69%), Gaps = 3/124 (2%)

Query: 101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVL 160
           I CKAAVAWE  KPL +E ++VAPP+A EVRIKI+ T++CHTD Y  +       FP +L
Sbjct: 1   ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRIL 60

Query: 161 GHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNV 220
           GHE +GIVESVGEGVT + PGDHV+P++  +C EC+ CKS K+N+C  +R         V
Sbjct: 61  GHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTD---RGV 117

Query: 221 TISD 224
            I+D
Sbjct: 118 MIND 121

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score =  183 bits (466), Expect = 5e-56
 Identities = 67/111 (60%), Positives = 84/111 (75%), Gaps = 1/111 (0%)

Query: 103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGH 162
           CKAAV WE  KPLS+E I+VAPPKAGEVRIK+V+T +CHTD + +DG       P +LGH
Sbjct: 1   CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDG-KLPTPLPVILGH 59

Query: 163 EGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           EG+GIVES+G GVT++ PGD VIPL+ PQC +CK C + + NLC+K R T 
Sbjct: 60  EGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTN 110

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score =  157 bits (399), Expect = 5e-46
 Identities = 65/136 (47%), Positives = 89/136 (65%), Gaps = 4/136 (2%)

Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL-DSEGKFP 157
           +VI CKAAVAW P +PL +E I+V PP+  EVRIKI+ T+ICHTD     G  +++  +P
Sbjct: 7   KVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYP 66

Query: 158 CVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLT 217
            +LGHE +GIVESVGEGV  +  GDHVIP++  +C +C++CK  KTNLC   R       
Sbjct: 67  RILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPF--- 123

Query: 218 SNVTISDFNMGYSMTG 233
            +V ++D    +S  G
Sbjct: 124 KSVMVNDGKTRFSTKG 139

Length = 381

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  152 bits (386), Expect = 3e-44
 Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 1/103 (0%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHE 163
           +AAV  E  KPL +E +++  P  GEV ++I +  +CH+D + + G D     P VLGHE
Sbjct: 2   RAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTG-DLPAPLPAVLGHE 60

Query: 164 GSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLC 206
           G+G+VE VG GVT V PGDHV+  +IP C  C++C   + NLC
Sbjct: 61  GAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLC 103

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score =  137 bits (346), Expect = 3e-38
 Identities = 54/115 (46%), Positives = 78/115 (67%), Gaps = 3/115 (2%)

Query: 95  ISLPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEG 154
           IS P VI C+AAVAW   + L +E ++V+PP+  E+RIK+VST++C +D   L   +S+ 
Sbjct: 5   ISQPNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSD---LSAWESQA 61

Query: 155 KFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKI 209
            FP + GHE SGIVES+GEGVT    GDHV+ ++  +C  C+ C S K+N+C  +
Sbjct: 62  LFPRIFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVL 116

Length = 378

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  136 bits (345), Expect = 4e-38
 Identities = 47/108 (43%), Positives = 61/108 (56%), Gaps = 2/108 (1%)

Query: 101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVL 160
           ++  AAV  EP  P  LE +++  P+  EV ++IV+T ICHTD    DG       P VL
Sbjct: 1   MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGL-PTPLPAVL 59

Query: 161 GHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
           GHEG+G+VE+VG  VT + PGDHV+ L    C EC  C S     C  
Sbjct: 60  GHEGAGVVEAVGSAVTGLKPGDHVV-LSFASCGECANCLSGHPAYCEN 106

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score =  128 bits (324), Expect = 5e-35
 Identities = 47/103 (45%), Positives = 69/103 (66%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHE 163
           KAAV W P +P  +E I++  PKAGEV +K+V++ +CH+D + + G     ++P + GHE
Sbjct: 3   KAAVLWGPGQPWEVEEIELDDPKAGEVLVKLVASGLCHSDEHLVTGDLPMPRYPILGGHE 62

Query: 164 GSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLC 206
           G+G+V  VG GVT V PGDHV+  +IP C  C++C +   NLC
Sbjct: 63  GAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLC 105

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  123 bits (312), Expect = 1e-33
 Identities = 46/111 (41%), Positives = 60/111 (54%), Gaps = 3/111 (2%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHE 163
           KAAV  +  +PL +E + V  P  GEV IK+ +  +CHTD +   G     K P + GHE
Sbjct: 5   KAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHE 64

Query: 164 GSGIVESVGEGVTSVAPGDHVI--PLYIPQCNECKFCKSSKTNLCTKIRTT 212
             G V  VGEGVT +  GD V    L I  C EC++C+S   NLC   + T
Sbjct: 65  IVGTVVEVGEGVTGLKVGDRVGVGWLVIS-CGECEYCRSGNENLCPNQKIT 114

Length = 339

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  117 bits (295), Expect = 7e-31
 Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 1/95 (1%)

Query: 113 KPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVG 172
           +PL +E +++ PP  GEV +KI +  +CH+D   ++G D     P  LGHE +G+V  VG
Sbjct: 19  RPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVING-DRPRPLPMALGHEAAGVVVEVG 77

Query: 173 EGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCT 207
           EGVT +  GDHV+ +++P C  C+ C   +  LC 
Sbjct: 78  EGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCE 112

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  116 bits (292), Expect = 1e-30
 Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 20/148 (13%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHE 163
           KAAV   P  PL++E I V  PK GE+ I++ +  +CH+D + L G +     P VLGHE
Sbjct: 2   KAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKG-ELPFPPPFVLGHE 60

Query: 164 GSGIVESVGEGVTS---VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKI----------- 209
            SG V  VG  V +   ++ GD V+  +I  C +C++C   K NLC              
Sbjct: 61  ISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLY 120

Query: 210 -RTTQLFLTSNVTISDFNMG----YSMT 232
             TT+LF      +  ++MG    Y++ 
Sbjct: 121 DGTTRLFRLDGGPVYMYSMGGLAEYAVV 148

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score =  106 bits (266), Expect = 3e-29
 Identities = 32/85 (37%), Positives = 47/85 (55%)

Query: 127 AGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIP 186
            GEV +++ +  IC +D +   G     K P +LGHEG+GIVE VG GVT +  GD V+ 
Sbjct: 1   PGEVLVRVKAAGICGSDLHIYRGEPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVV 60

Query: 187 LYIPQCNECKFCKSSKTNLCTKIRT 211
             +  C +C  C+  + NLC   + 
Sbjct: 61  YPLIPCGKCAACREGRENLCPNGKF 85

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  111 bits (280), Expect = 5e-29
 Identities = 45/107 (42%), Positives = 59/107 (55%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHE 163
           KAA+  +P KPL +E +    P  GEV IK+ +  +C+ D     G    GK+P +LGHE
Sbjct: 2   KAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHE 61

Query: 164 GSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIR 210
             G VE VGEGV    PGD VI  Y   C +C++C S + NLC    
Sbjct: 62  IVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRA 108

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  103 bits (258), Expect = 7e-26
 Identities = 43/110 (39%), Positives = 54/110 (49%), Gaps = 1/110 (0%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHE 163
           KAAV      PL  E + V  P  GEV IKI +  +CHTD +  +G     K+P V GHE
Sbjct: 1   KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHE 60

Query: 164 GSGIVESVGEGVTSVAPGDHV-IPLYIPQCNECKFCKSSKTNLCTKIRTT 212
             G V  VG GV     GD V +   +  C  C++C+    NLC K   T
Sbjct: 61  IVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNT 110

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  101 bits (253), Expect = 4e-25
 Identities = 40/107 (37%), Positives = 60/107 (56%), Gaps = 5/107 (4%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL--DSEG-KFPCVL 160
           KAA  +E  KPL LE + V  P  G+V +++    +CH+D + +DG+       K P  L
Sbjct: 2   KAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTL 61

Query: 161 GHEGSGIVESVGEGVTSVAPGDHVIPLYIPQ-CNECKFCKSSKTNLC 206
           GHE +G VE VG GV  +  GD V+ ++ P  C  C++C+  + N C
Sbjct: 62  GHENAGWVEEVGSGVDGLKEGDPVV-VHPPWGCGTCRYCRRGEENYC 107

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score =  101 bits (252), Expect = 6e-25
 Identities = 45/106 (42%), Positives = 63/106 (59%), Gaps = 3/106 (2%)

Query: 102 ECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTD-AYTLDGLDSEGKFPCVL 160
             +  +A     P+ LETI V  P  GEV + I +  +CHTD  Y   G++ E  FP +L
Sbjct: 1   TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGINDE--FPFLL 58

Query: 161 GHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLC 206
           GHE +G+VE+VGEGVT VAPGD+V+  +   C +C+ CK  +   C
Sbjct: 59  GHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYC 104

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score = 98.8 bits (247), Expect = 3e-24
 Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 12/108 (11%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHE 163
           KA V +E    L +E + V  P   EV IK+ +  IC TD +  +G +     P V GHE
Sbjct: 2   KALV-YEGPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEG-EFGAAPPLVPGHE 59

Query: 164 GSGIVESVGEGVTSVAPGDHV-----IPLYIPQCNECKFCKSSKTNLC 206
            +G+V +VG  VT    GD V     I      C EC +C+  + NLC
Sbjct: 60  FAGVVVAVGSKVTGFKVGDRVAVDPNIY-----CGECFYCRRGRPNLC 102

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 98.6 bits (246), Expect = 4e-24
 Identities = 37/104 (35%), Positives = 50/104 (48%), Gaps = 2/104 (1%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHE 163
           KA +    K+   +E +    P   EV IK+    +C+ D   L G     K+P +LGHE
Sbjct: 2   KAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHE 61

Query: 164 GSGIVESVGEGVTSVAPGDHVIPL-YIPQCNECKFCKSSKTNLC 206
             G VE VGE V    PGD V  L Y P    C++C+S +   C
Sbjct: 62  VVGTVEEVGENVKGFKPGDRVASLLYAP-DGTCEYCRSGEEAYC 104

Length = 334

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score = 98.5 bits (246), Expect = 5e-24
 Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 6/110 (5%)

Query: 103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGH 162
            +AAV   P KPL +  + +   + G V +++    +C +D +T+ G       P +LGH
Sbjct: 1   ARAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGH 60

Query: 163 EGSGIVESVGEGVTS------VAPGDHVIPLYIPQCNECKFCKSSKTNLC 206
           EG G V ++G GVT+      +  GD V       C  C  C       C
Sbjct: 61  EGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKC 110

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score = 97.3 bits (243), Expect = 1e-23
 Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 6/103 (5%)

Query: 113 KPLSLETIQVAPP--KAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVES 170
           KP  LE + +  P   AGEV +++    IC +D +   G +    +P +LGHE SG V  
Sbjct: 8   KPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVE 67

Query: 171 VGEGVTSVAPGDHV--IPLYIPQCNECKFCKSSKTNLCTKIRT 211
           VGEGV  +  GD V   P YI  C EC  C+  + N C  ++ 
Sbjct: 68  VGEGVAGLKVGDRVVVDP-YIS-CGECYACRKGRPNCCENLQV 108

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 94.7 bits (236), Expect = 4e-23
 Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 1/79 (1%)

Query: 129 EVRIKIVSTAICHTDAYTLDGLDSEG-KFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPL 187
           EV +++ +  +C TD +   G      K P +LGHEG+G+V  VG GVT V  GD V+ L
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVL 60

Query: 188 YIPQCNECKFCKSSKTNLC 206
               C  C+ C+       
Sbjct: 61  PNLGCGTCELCRELCPGGG 79

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 93.0 bits (232), Expect = 4e-22
 Identities = 43/108 (39%), Positives = 59/108 (54%), Gaps = 5/108 (4%)

Query: 104 KAAVAWEPKK----PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCV 159
           KA V  +P      PL L  + V  P  GEV IK+ +  +C TD + ++G     K P +
Sbjct: 2   KAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLI 61

Query: 160 LGHEGSGIVESVGEGVTSVAPGDHV-IPLYIPQCNECKFCKSSKTNLC 206
            GHE  G VE+VG GVT  + GD V +P     C EC++C+S + NLC
Sbjct: 62  PGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLC 109

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 92.9 bits (232), Expect = 4e-22
 Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 1/110 (0%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHE 163
           K   A +    L   T +  P    +V IKI    +CH+D +TL       K+P V GHE
Sbjct: 1   KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHE 60

Query: 164 GSGIVESVGEGVTSVAPGDHV-IPLYIPQCNECKFCKSSKTNLCTKIRTT 212
             GIV +VG  VT    GD V +   +  C  C+ CKS +   C K   T
Sbjct: 61  IVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVT 110

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score = 91.9 bits (229), Expect = 1e-21
 Identities = 43/109 (39%), Positives = 56/109 (51%), Gaps = 10/109 (9%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGK--FPCVLG 161
           KA V   P   L  E I    P  GEV +K+ +  IC +D   +      G    P VLG
Sbjct: 2   KALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSD---IPRYLGTGAYHPPLVLG 57

Query: 162 HEGSGIVESVGEGVTSVAPGDHV--IPLYIPQCNECKFCKSSKTNLCTK 208
           HE SG VE VG GV  +A GD V   PL +P C +C++CK  + +LC+ 
Sbjct: 58  HEFSGTVEEVGSGVDDLAVGDRVAVNPL-LP-CGKCEYCKKGEYSLCSN 104

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score = 91.4 bits (228), Expect = 2e-21
 Identities = 41/118 (34%), Positives = 54/118 (45%), Gaps = 17/118 (14%)

Query: 106 AVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTD--AYTLDG----------LDSE 153
           A  +  +K + +E +   P K GEV+IK+    IC +D   Y LDG            + 
Sbjct: 3   AARYHGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEY-LDGPIFIPTEGHPHLTG 61

Query: 154 GKFPCVLGHEGSGIVESVGEGVTSVAPGDHVI--PLYIPQCNECKFCKSSKTNLCTKI 209
              P  LGHE SG+V  VG GVT    GD V+  P    +C  C  CK    NLC  +
Sbjct: 62  ETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTI--KCGTCGACKRGLYNLCDSL 117

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score = 90.8 bits (226), Expect = 3e-21
 Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 1/100 (1%)

Query: 112 KKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDG-LDSEGKFPCVLGHEGSGIVES 170
           K  L LE + V  P  GEV +K+ +  +CH+D + LDG + +  K P  LGHE +G V  
Sbjct: 11  KGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVE 70

Query: 171 VGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIR 210
           VG GVT+   GD V    +  C  C  C+  + NLC    
Sbjct: 71  VGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQG 110

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 90.3 bits (225), Expect = 4e-21
 Identities = 40/114 (35%), Positives = 64/114 (56%), Gaps = 5/114 (4%)

Query: 103 CKAAVAWEP-KKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDG-LDSEGKFPCVL 160
            KAAV  E  +KP  ++ + V  P  GEV +K+ ++ +CHTD +   G    + K P + 
Sbjct: 1   MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIG 60

Query: 161 GHEGSGIVESVGEGVTSVAPGDHV--IPLYIPQCNECKFCKSSKTNLCTKIRTT 212
           GHEG+G+V +VG GV+ +  GD V    LY   C +C++C++    LC   + +
Sbjct: 61  GHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDA-CGKCEYCRTGDETLCPNQKNS 113

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score = 89.9 bits (224), Expect = 5e-21
 Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 17/109 (15%)

Query: 112 KKPLSLETIQVAPPKAGEVRIKIVSTAICHTDA-YTLDGLDSEGKF----PCVLGHEGSG 166
              L LE   +  P  GEV +++ +  IC +D  Y   G    G F    P VLGHE +G
Sbjct: 7   PGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHG--RIGDFVVKEPMVLGHESAG 64

Query: 167 IVESVGEGVTSVAPGDHV-----IPLYIPQCNECKFCKSSKTNLCTKIR 210
            V +VG GVT +  GD V     +P     C  C+FCKS + NLC  +R
Sbjct: 65  TVVAVGSGVTHLKVGDRVAIEPGVP-----CRTCEFCKSGRYNLCPDMR 108

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 89.4 bits (222), Expect = 1e-20
 Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 6/128 (4%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFP-CVLGH 162
           KAAV +     + LE      P  G+V I++ +T IC +D +   G +        +LGH
Sbjct: 2   KAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGH 61

Query: 163 EGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTI 222
           E  G V  VG  V     GD V+      C  C++C++ + NLC        F       
Sbjct: 62  EFVGEVVEVGV-VRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPG----FYGYAGLG 116

Query: 223 SDFNMGYS 230
              + G++
Sbjct: 117 GGIDGGFA 124

Length = 350

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 86.2 bits (214), Expect = 7e-20
 Identities = 37/107 (34%), Positives = 50/107 (46%), Gaps = 4/107 (3%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAG--EVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLG 161
           KA V   P  P ++E  +V  P+ G  EV IK+ +  IC +D +   G     + P VLG
Sbjct: 2   KALVKTGPG-PGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLG 60

Query: 162 HEGSGIVESVGEGVTSVAPGDHVIPLYIPQ-CNECKFCKSSKTNLCT 207
           HE SG +  VG  V     GD V+       C  C +C+    NLC 
Sbjct: 61  HEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCP 107

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score = 86.1 bits (214), Expect = 1e-19
 Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 11/113 (9%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHE 163
           KAAV       + LE + V  P  GEV +K+ +  IC TD   + G  ++ K P +LGHE
Sbjct: 2   KAAV-LHGPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHE 60

Query: 164 GSGIVESVGEGVTSVAPGD-----HVIPLYIPQCNECKFCKSSKTNLCTKIRT 211
            +G +  VG+GVT    GD       +P     C EC +C     N+C   + 
Sbjct: 61  IAGEIVEVGDGVTGFKVGDRVFVAPHVP-----CGECHYCLRGNENMCPNYKK 108

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score = 85.4 bits (212), Expect = 2e-19
 Identities = 47/121 (38%), Positives = 57/121 (47%), Gaps = 16/121 (13%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDG-----------LDS 152
           KAA   EP KPL    I    P   EV +K+ +  +CH+D +  DG           LD 
Sbjct: 2   KAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDD 61

Query: 153 EG-KFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIP--QCNECKFCKSSKTNLCTKI 209
            G K P VLGHE  G V +VG     V  GD V+ +Y P   C EC  C +   NLC K 
Sbjct: 62  RGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVL-VY-PWIGCGECPVCLAGDENLCAKG 119

Query: 210 R 210
           R
Sbjct: 120 R 120

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 83.1 bits (206), Expect = 2e-18
 Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 13/107 (12%)

Query: 112 KKPLSLETIQVAPPKAGEVRIKIVSTAICHTD-AYTLDGL--DSEGKFPCVLGHEGSGIV 168
              L +E      P  GEVR+++ +  IC +D  Y   G       + P VLGHE SG+V
Sbjct: 6   AGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVV 65

Query: 169 ESVGEGVTSVAPGDHVI-----PLYIPQCNECKFCKSSKTNLCTKIR 210
           E+VG GVT +APG  V      P     C  C +C++ + NLC  +R
Sbjct: 66  EAVGPGVTGLAPGQRVAVNPSRP-----CGTCDYCRAGRPNLCLNMR 107

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score = 81.2 bits (201), Expect = 9e-18
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 1/94 (1%)

Query: 115 LSLETIQVAPPKAGEVRIKIVSTAICHTD-AYTLDGLDSEGKFPCVLGHEGSGIVESVGE 173
           + L    V  P  GEV +++ ++ +C +D  Y   G  +      + GHE +G+V +VG 
Sbjct: 12  VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGP 71

Query: 174 GVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCT 207
           GVT    GD V+  +   C  C+ C+     LCT
Sbjct: 72  GVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCT 105

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score = 81.1 bits (201), Expect = 9e-18
 Identities = 31/103 (30%), Positives = 53/103 (51%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHE 163
           +AAV  E  +PL +  +    P    V +++ +  +C +D +   G D +   P V GHE
Sbjct: 2   RAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHE 61

Query: 164 GSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLC 206
            +G+V  VGE V+    GD V   ++  C  C +C++  +N+C
Sbjct: 62  FAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVC 104

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score = 79.5 bits (197), Expect = 4e-17
 Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 5/104 (4%)

Query: 106 AVAWEPKKPLSLETIQVAPPK---AGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGH 162
           A+ W  K  + +E   V  PK     +  +++ +TAIC +D +   G     K   +LGH
Sbjct: 3   ALVWHGKGDVRVEE--VPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGH 60

Query: 163 EGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLC 206
           E  G+VE VG  V ++  GD V+  +   C EC +CK    + C
Sbjct: 61  EFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQC 104

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score = 78.8 bits (195), Expect = 5e-17
 Identities = 43/116 (37%), Positives = 57/116 (49%), Gaps = 15/116 (12%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDA--YTLDGL-DSEGKFPCVL 160
           KA V  +      L  + V  P  GEV IK+++ +IC TD   Y  D    S  K P + 
Sbjct: 2   KAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIF 61

Query: 161 GHEGSGIVESVGEGVTSVAPGDHV-----IPLYIPQCNECKFCKSSKTNLC--TKI 209
           GHE +G V  VGEGVT V  GD+V     I      C +C  C++   ++C  TKI
Sbjct: 62  GHEFAGEVVEVGEGVTRVKVGDYVSAETHIV-----CGKCYQCRTGNYHVCQNTKI 112

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 78.1 bits (193), Expect = 1e-16
 Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 5/99 (5%)

Query: 115 LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLD-SEGKFPCVLGHEGSGIVESVGE 173
           L    +    P   EV +++ + A+ H D +   G+   +   P +LG +G+G+VE+VG 
Sbjct: 15  LEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGP 74

Query: 174 GVTSVAPGDHVI--PLYIPQCNECKFCKSSKTNLCTKIR 210
           GVT+V PG  V+  P     C  C++C + + NLC +  
Sbjct: 75  GVTNVKPGQRVVIYPGI--SCGRCEYCLAGRENLCAQYG 111

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 77.7 bits (192), Expect = 1e-16
 Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 1/110 (0%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHE 163
           KA    EP  PL L    V  P  GEV IK+ +  +CH+DA+  +G      +P V GHE
Sbjct: 2   KAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHE 61

Query: 164 GSGIVESVGEGVTSVAPGDHV-IPLYIPQCNECKFCKSSKTNLCTKIRTT 212
             G +++VGEGV+    GD V +  +   C  C  C+      C   + T
Sbjct: 62  VVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVT 111

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 77.7 bits (192), Expect = 2e-16
 Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 6/108 (5%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPK---AGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVL 160
           KA V   P K   +   +V  PK     +  +++ +T+IC +D +   G     K   +L
Sbjct: 2   KALVYLGPGK---IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMIL 58

Query: 161 GHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
           GHE  G V  VG  V  + PGD V    I  C  C+FC+      C  
Sbjct: 59  GHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCEN 106

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 76.8 bits (190), Expect = 2e-16
 Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 5/87 (5%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKA--GEVRIKIVSTAICHTDAYTLDGLDSEG---KFPC 158
           KA    E   P  LE   V  P+   GEV +K+ +  +   D    +GL         P 
Sbjct: 2   KAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPL 61

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVI 185
           + GH+ +G+V +VG GVT    GD V 
Sbjct: 62  IPGHDVAGVVVAVGPGVTGFKVGDEVF 88

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score = 76.6 bits (189), Expect = 3e-16
 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 3/90 (3%)

Query: 104 KAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDS-EGKFPCVL 160
           KA V  E   P  L +  +    P  GEV +++ +  +   D     GL       P + 
Sbjct: 2   KAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIP 61

Query: 161 GHEGSGIVESVGEGVTSVAPGDHVIPLYIP 190
           G E +G+V +VG GVT    GD V  L   
Sbjct: 62  GSEAAGVVVAVGSGVTGFKVGDRVAALGGV 91

Length = 326

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 75.5 bits (186), Expect = 8e-16
 Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 17/133 (12%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHE 163
           KAAV  +      +    + P K GE  +K+    +CHTD +  +G D   K   +LGHE
Sbjct: 2   KAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANG-DFGDKTGRILGHE 60

Query: 164 GSGIVESVGEGVTSVAPGDHV-IPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTI 222
           G GIV+ VG GVTS+  GD V I  +   C  C++C + +  LC  ++            
Sbjct: 61  GIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVK------------ 108

Query: 223 SDFNMGYSMTGSL 235
              N GY++ G +
Sbjct: 109 ---NAGYTVDGGM 118

Length = 338

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 75.7 bits (187), Expect = 9e-16
 Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 11/108 (10%)

Query: 106 AVAWEPKKPLSLETIQVAPPK---AGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGH 162
                   P ++    V  PK     +  ++I +TAIC +D +   G     +   VLGH
Sbjct: 2   KAVVY-GGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGA-EPGLVLGH 59

Query: 163 EGSGIVESVGEGVTSVAPGDHVIPLYIP---QCNECKFCKSSKTNLCT 207
           E  G VE VG  V S+  GD V+   +P    C  C+ CK   T +C 
Sbjct: 60  EAMGEVEEVGSAVESLKVGDRVV---VPFNVACGRCRNCKRGLTGVCL 104

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 74.9 bits (184), Expect = 1e-15
 Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 2/98 (2%)

Query: 110 EPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTD-AYTLDGLDSEGKFPCVLGHEGSGIV 168
           EP KP+    +++    AG+V +K+    +CHTD +Y   G+ +    P  LGHE SG V
Sbjct: 6   EPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRV 65

Query: 169 ESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLC 206
              G G  S      ++P  IP C EC+ CK+ +  +C
Sbjct: 66  IQAGAGAASWIGKAVIVPAVIP-CGECELCKTGRGTIC 102

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 72.9 bits (180), Expect = 5e-15
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 13/90 (14%)

Query: 104 KAAVAWEPKKPLSLETIQVAP-PKA-GEVRIKIVSTAICHTDAYTLDGLDSEGKF----- 156
           KA V  E   P  L   +V P P A GEVRI++ +  +        D L  +GK+     
Sbjct: 2   KAVVCKELGGPEDLVLEEVPPEPGAPGEVRIRVEAAGVNF-----PDLLMIQGKYQVKPP 56

Query: 157 -PCVLGHEGSGIVESVGEGVTSVAPGDHVI 185
            P V G E +G+VE+VGEGVT    GD V+
Sbjct: 57  LPFVPGSEVAGVVEAVGEGVTGFKVGDRVV 86

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score = 73.1 bits (180), Expect = 6e-15
 Identities = 28/76 (36%), Positives = 39/76 (51%)

Query: 132 IKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQ 191
           +K++ T IC TD + L G         +LGHEG G+VE VG  VT+   GD V+   I  
Sbjct: 30  VKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCISS 89

Query: 192 CNECKFCKSSKTNLCT 207
           C  C +C+    + C 
Sbjct: 90  CGTCGYCRKGLYSHCE 105

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 72.6 bits (179), Expect = 8e-15
 Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 2/83 (2%)

Query: 104 KAAVAWEPK-KPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGH 162
           KAAV   P    L +  + V  P   EV +K+ + A+   D    D       +P +LG 
Sbjct: 2   KAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQD-YGFIPSYPAILGC 60

Query: 163 EGSGIVESVGEGVTSVAPGDHVI 185
           + +G V  VG GVT    GD V 
Sbjct: 61  DFAGTVVEVGSGVTRFKVGDRVA 83

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 70.4 bits (173), Expect = 4e-14
 Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 3/80 (3%)

Query: 111 PKKPLSLETIQVA--PPKAGEVRIKIVSTAICHTDAYTLDGL-DSEGKFPCVLGHEGSGI 167
              PL LE + +   PP  GEV +++++  I  +D  T+ G   S    P V G+EG G+
Sbjct: 8   EPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGV 67

Query: 168 VESVGEGVTSVAPGDHVIPL 187
           V  VG GV+ +  G  V+PL
Sbjct: 68  VVEVGSGVSGLLVGQRVLPL 87

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 70.2 bits (172), Expect = 5e-14
 Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 3/98 (3%)

Query: 112 KKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL---DSEGKFPCVLGHEGSGIV 168
              L ++  ++ P    +VR+++ +  IC +D + L  +   D   K P V+GHE +GI+
Sbjct: 26  VNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGII 85

Query: 169 ESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLC 206
           E VG  V  +  GD V       C  C  CK  + NLC
Sbjct: 86  EEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLC 123

Length = 364

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 69.9 bits (172), Expect = 6e-14
 Identities = 39/117 (33%), Positives = 52/117 (44%), Gaps = 17/117 (14%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDA--YTLDGL-DSEGKFPCVL 160
           KA V  + +  L L  + V  P   +V IK+  TAIC TD   Y  D         P V+
Sbjct: 2   KALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVV 61

Query: 161 GHEGSGIVESVGEGVTSVAPGD------HVIPLYIPQCNECKFCKSSKTNLC--TKI 209
           GHE  G V  VG  VT    GD      H++      C  C+ C++ + +LC  TK 
Sbjct: 62  GHEFVGEVVEVGSEVTGFKVGDRVSGEGHIV------CGHCRNCRAGRRHLCRNTKG 112

Length = 341

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 69.8 bits (171), Expect = 7e-14
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 1/106 (0%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHE 163
           K+ V  +P   L++E   +  P AGEVR+K+    IC +D++   G +   K+P V+GHE
Sbjct: 2   KSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHE 60

Query: 164 GSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKI 209
             G++++VGEGV +   G+ V    +  C  C  C   K N+CT +
Sbjct: 61  FFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSL 106

Length = 339

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 69.0 bits (170), Expect = 1e-13
 Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 115 LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEG 174
           L  E + V  P  GEV ++  +  +   D Y   GL      P VLG EG+G+VE+VG G
Sbjct: 14  LEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGL-YPLPLPFVLGVEGAGVVEAVGPG 72

Query: 175 VTSVAPGDHV 184
           VT    GD V
Sbjct: 73  VTGFKVGDRV 82

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 68.8 bits (169), Expect = 1e-13
 Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 1/71 (1%)

Query: 115 LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGE 173
           L +E + V  P AGEV I++ +  +   DA    G   E    P  LG+E +G+VE+VG 
Sbjct: 15  LRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGA 74

Query: 174 GVTSVAPGDHV 184
           GVT  A GD V
Sbjct: 75  GVTGFAVGDRV 85

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 69.1 bits (169), Expect = 2e-13
 Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 9/103 (8%)

Query: 115 LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEG--------KFPCVLGHEGSG 166
           L +E + V   K  E+ I++ +  IC +D +  +  D +G        +FP V+GHE SG
Sbjct: 39  LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYET-DKDGYILYPGLTEFPVVIGHEFSG 97

Query: 167 IVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKI 209
           +VE  G+ V +   GD V    +  C  C+ C+S   N C  +
Sbjct: 98  VVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNL 140

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score = 68.4 bits (168), Expect = 2e-13
 Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 17/119 (14%)

Query: 106 AVAWEPKKPLSLETIQV-APPKAGEVRIKIVSTAICHTD--AYTLDGLDSEGKFPC---- 158
           AV ++    + +E + +       +  +K+ + AIC +D   Y        G  P     
Sbjct: 3   AVVFKGPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIY-------RGHIPSTPGF 55

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLT 217
           VLGHE  G V  VG  V ++  GD V+  +   C EC +C+  ++  C K     LF  
Sbjct: 56  VLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAK---GGLFGY 111

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score = 66.9 bits (164), Expect = 7e-13
 Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 1/75 (1%)

Query: 132 IKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQ 191
           I++V+T +C +D +   G  S  + P  +GHE  G+VE VG  VTSV PGD VI  +   
Sbjct: 30  IRVVATCVCGSDLWPYRG-VSPTRAPAPIGHEFVGVVEEVGSEVTSVKPGDFVIAPFAIS 88

Query: 192 CNECKFCKSSKTNLC 206
              C FC++  T  C
Sbjct: 89  DGTCPFCRAGFTTSC 103

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 65.6 bits (160), Expect = 2e-12
 Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 3/94 (3%)

Query: 117 LETIQVAPPKAGEVRIKIVSTAICHTDA--YTLDGL-DSEGKFPCVLGHEGSGIVESVGE 173
           L  + V  P  GEV IK+++T+IC TD   Y  D    S  K P V+GHE +G V  +G 
Sbjct: 13  LTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGP 72

Query: 174 GVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCT 207
           GV  +  GD+V       C +C  C+  + ++C 
Sbjct: 73  GVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQ 106

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 65.7 bits (161), Expect = 2e-12
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 13/89 (14%)

Query: 104 KAAVAWEPKKPLSLETIQVA--PPKAGEVRIKIVSTAICHTDAYTLD------GLDSEGK 155
           KA V      P   E  +V    P  G+V +++ ++ +       LD      G  +   
Sbjct: 2   KALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGV-----NPLDTKIRRGGAAARPP 56

Query: 156 FPCVLGHEGSGIVESVGEGVTSVAPGDHV 184
            P +LG + +G+VE+VGEGVT    GD V
Sbjct: 57  LPAILGCDVAGVVEAVGEGVTRFRVGDEV 85

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 64.9 bits (159), Expect = 3e-12
 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 1/72 (1%)

Query: 115 LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL-DSEGKFPCVLGHEGSGIVESVGE 173
           L +E   +  P +GEVR+++ +  +   D     GL DS  K P V G E +G VE+VGE
Sbjct: 14  LKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGE 73

Query: 174 GVTSVAPGDHVI 185
           GV     GD V+
Sbjct: 74  GVKDFKVGDRVM 85

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 64.5 bits (158), Expect = 5e-12
 Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 6/85 (7%)

Query: 109 WEPKKPLSLETIQVAPPKA-GEVRIKIVSTAICHTDAYTLDG-----LDSEGKFPCVLGH 162
            EPK+ L LE+ ++ PP    EV +K+++  I   D   + G       +  + P V G+
Sbjct: 10  GEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGN 69

Query: 163 EGSGIVESVGEGVTSVAPGDHVIPL 187
           EG G V  VG GV S+ PGD VIPL
Sbjct: 70  EGVGEVVKVGSGVKSLKPGDWVIPL 94

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 61.2 bits (149), Expect = 7e-11
 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 1/93 (1%)

Query: 115 LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEG 174
           L +E ++   P  GEV I++    +   D   ++ +  +   P + G E +G+VE VG+ 
Sbjct: 14  LKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVKPM-PHIPGAEFAGVVEEVGDH 72

Query: 175 VTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCT 207
           V  V  GD V+         C  C S    LC 
Sbjct: 73  VKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCR 105

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score = 61.3 bits (149), Expect = 7e-11
 Identities = 38/116 (32%), Positives = 50/116 (43%), Gaps = 12/116 (10%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDS----EG----- 154
           +A V   P+    LE + V  P  GE+ +K+ +  IC  D     G  S    E      
Sbjct: 2   RAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYV 60

Query: 155 KFPCVLGHEGSGIVESVGEGVTS--VAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
           K P + GHE  G V  +GEG     V  GD VI   I  C  C+FC   +  +C K
Sbjct: 61  KPPMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQK 116

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 59.2 bits (144), Expect = 3e-10
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 3/73 (4%)

Query: 115 LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDG---LDSEGKFPCVLGHEGSGIVESV 171
           L    + +  PK GEV +K+ + ++   D     G   L     FP + G + +G V +V
Sbjct: 14  LLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAV 73

Query: 172 GEGVTSVAPGDHV 184
           G GVT    GD V
Sbjct: 74  GSGVTRFKVGDEV 86

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 57.9 bits (141), Expect = 8e-10
 Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 18/95 (18%)

Query: 108 AWEPKKP-----LSLETIQVAPPKAGEVRIKI--VS-----TAICHTDAYTLDGLDSEGK 155
           AW          L L    V  P  GEV +++  VS       I +   Y         K
Sbjct: 3   AWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILN-GRYPP-----PVK 56

Query: 156 FPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIP 190
            P +   +G+G V +VGEGVT    GD V+P + P
Sbjct: 57  DPLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFP 91

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 57.4 bits (139), Expect = 1e-09
 Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 121 QVAPPKAGEVRIKIVSTAICHTDAYTLDGL-DSEGKFPCVLGHEGSGIVESVGEGVTSVA 179
           +VAPP  GEVRI++ + ++   D   + GL  +   +P   G E SG+V +VG  VT +A
Sbjct: 1   EVAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLA 60

Query: 180 PGDHVI 185
            GD VI
Sbjct: 61  VGDEVI 66

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 57.0 bits (138), Expect = 1e-09
 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 3/76 (3%)

Query: 115 LSLETIQVAPPKAGEVRIKIVSTAICHTD-AYTLDGL--DSEGKFPCVLGHEGSGIVESV 171
             +E      P  G+V +++    +C +D      G         P   GHEG G V ++
Sbjct: 7   FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVAL 66

Query: 172 GEGVTSVAPGDHVIPL 187
           G GV  +A GD V  L
Sbjct: 67  GPGVRGLAVGDRVAGL 82

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 56.9 bits (138), Expect = 2e-09
 Identities = 31/110 (28%), Positives = 43/110 (39%), Gaps = 11/110 (10%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHE 163
           KA V  +    L +E +    P  GE  ++++   IC+TD     G      FP V GHE
Sbjct: 2   KALV-LDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGY---YPFPGVPGHE 57

Query: 164 GSGIVESVGEG--VTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT 211
             GIVE   E   V     G+  I      C  C++C+      C     
Sbjct: 58  FVGIVEEGPEAELVGKRVVGEINIA-----CGRCEYCRRGLYTHCPNRTV 102

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 56.7 bits (137), Expect = 2e-09
 Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 4/109 (3%)

Query: 104 KAAVAWEPKKP---LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVL 160
           K    W  + P   LS  T  +      +V IK++   ICHTD + +        +P V 
Sbjct: 8   KKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVP 67

Query: 161 GHEGSGIVESVGEGVTSVAPGDHV-IPLYIPQCNECKFCKSSKTNLCTK 208
           GHE  G V  VG  V+    GD V + + +  C EC  CKS     C K
Sbjct: 68  GHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNK 116

Length = 357

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 56.1 bits (136), Expect = 3e-09
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 5/82 (6%)

Query: 108 AWEPKKP-----LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGH 162
           AW   KP     L+LE I++  P AGEV +K+ +  +   D   +        +P V G 
Sbjct: 3   AWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGV 62

Query: 163 EGSGIVESVGEGVTSVAPGDHV 184
           +G+G+V +VG  VT    GD V
Sbjct: 63  DGAGVVVAVGAKVTGWKVGDRV 84

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 56.1 bits (136), Expect = 4e-09
 Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 113 KPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL-DSEGKFPCVLGHEGSGIVESV 171
           K LSL   +V  P  GEV IK+ +  I  +D   L G   S    P   G EGSG V + 
Sbjct: 16  KELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAA 75

Query: 172 GEGV 175
           G G 
Sbjct: 76  GGGP 79

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 56.0 bits (135), Expect = 4e-09
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 5/82 (6%)

Query: 129 EVRIKIVSTAICHTDAYTLDGLDSEGK--FPCVLGHEGSGIVESVGEGVTSVAPGDHVIP 186
           +V +K+ S+ +C +D   +  +   G   +P  LGHE SG VE+VG GV  + PGD V  
Sbjct: 27  DVLVKVASSGLCGSD---IPRIFKNGAHYYPITLGHEFSGYVEAVGSGVDDLHPGDAVAC 83

Query: 187 LYIPQCNECKFCKSSKTNLCTK 208
           + +  C  C  C     +LC K
Sbjct: 84  VPLLPCFTCPECLRGFYSLCAK 105

Length = 347

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 55.8 bits (134), Expect = 5e-09
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)

Query: 129 EVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHV-IPL 187
           +V +KI+   +CH+D +T+       ++P + GHE  GI   VG+ VT    GD V + +
Sbjct: 33  DVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGV 92

Query: 188 YIPQCNECKFCKSSKTNLCTKI 209
            I  C  C+ C     N C K+
Sbjct: 93  IIGSCQSCESCNQDLENYCPKV 114

Length = 375

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 55.7 bits (134), Expect = 5e-09
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 1/85 (1%)

Query: 129 EVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHV-IPL 187
           +V +KI+   +CH+D +T+       ++P V GHE  GIV  +G+ V     GD V + +
Sbjct: 39  DVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGV 98

Query: 188 YIPQCNECKFCKSSKTNLCTKIRTT 212
            +  C  C+ C     N C K+  T
Sbjct: 99  IVGSCKSCESCDQDLENYCPKMIFT 123

Length = 360

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 55.3 bits (134), Expect = 6e-09
 Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 8/108 (7%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFP-----C 158
           KA      K  + +  I    P  GEV ++ +   +C TD   + G    G  P      
Sbjct: 2   KAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAG--EYGTAPPGEDFL 59

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLC 206
           VLGHE  G+VE VG+G + ++PGD V+P       +C  C+  + + C
Sbjct: 60  VLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFC 106

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score = 54.9 bits (132), Expect = 8e-09
 Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 14/116 (12%)

Query: 108 AWEPKKP-------LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDG---LDSEGKFP 157
           AWE ++P       L      V  P  GE+ +++ +  +C TD +  +G   +      P
Sbjct: 1   AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTP 60

Query: 158 CVLGHEGSGIVESVGEGVTSVAPGDHV-IPLYIPQCNECKFCKSSKTNLCTKIRTT 212
              GHE  G V   G      A GD V I      C  C++C+    NLC   R T
Sbjct: 61  ---GHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYT 113

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 54.5 bits (132), Expect = 1e-08
 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 128 GEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHVI 185
            EV +++ +  +   D     GL         LG E SGIV  VG GVT +  GD V+
Sbjct: 1   DEVEVEVKAAGLNFRDVLVALGLLPGD--ETPLGLECSGIVTRVGSGVTGLKVGDRVM 56

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 54.1 bits (131), Expect = 2e-08
 Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 115 LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL-DSEGKFPCVLGHEGSGIVESVGE 173
           L L  + V  P  GEV +++ ++ +   D Y   G        P V G +G+G+VE+VGE
Sbjct: 15  LRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGE 74

Query: 174 GVTSVAPGDHV 184
           GV  +  GD V
Sbjct: 75  GVDGLKVGDRV 85

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score = 53.8 bits (130), Expect = 2e-08
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 8/66 (12%)

Query: 125 PKAG--EVRIKIVSTAICHTDAYTLDG---LDSEGKFPCVLGHEGSGIVESVGEGVTSVA 179
           P  G  +  ++  + A C +D +T+ G    +  G    +LGHE  G+VE VG  V    
Sbjct: 20  PVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGM---ILGHEAVGVVEEVGSEVKDFK 76

Query: 180 PGDHVI 185
           PGD VI
Sbjct: 77  PGDRVI 82

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 53.0 bits (128), Expect = 3e-08
 Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 4/84 (4%)

Query: 104 KAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLG 161
           KA V  +P  P  L L  I +  PK G V I++ +  +  ++ +T  G     KFP VLG
Sbjct: 2   KAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLG 61

Query: 162 HEGSGIVESVGEGVTSVAPGDHVI 185
            E  G VE    G  +  PG  V 
Sbjct: 62  IEAVGEVEEAPGG--TFTPGQRVA 83

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 53.2 bits (128), Expect = 3e-08
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)

Query: 114 PLSLETIQVAP--PKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESV 171
           P  L+ ++  P  P   EV+++  +  I + D Y   GL      P  LG E +G+V  V
Sbjct: 13  PEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKV 72

Query: 172 GEGVTSVAPGDHVI 185
           G GV  +  GD V+
Sbjct: 73  GSGVKHIKVGDRVV 86

Length = 327

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 52.9 bits (128), Expect = 4e-08
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 104 KAAVAWEPKK---PLSLETIQVAPPKAG--EVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           KA    +P     P SL  I++  P  G  ++ +++ + ++   D     G       P 
Sbjct: 2   KAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPK 61

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHV 184
           +LG + SG+VE+VG  VT    GD V
Sbjct: 62  ILGWDASGVVEAVGSEVTLFKVGDEV 87

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 51.2 bits (123), Expect = 1e-07
 Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)

Query: 117 LETIQVAP--PKAGEVRIKIVSTAICHTDAYTLDG-LDSEGKFPCVLGHEGSGIVESVGE 173
           LE  +V    P AGEV ++   + I + D +T+ G    + + P + G E  G+V++VGE
Sbjct: 16  LEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGE 75

Query: 174 GVTSVAPGDHV 184
           GV  +  G  V
Sbjct: 76  GVKGLQVGQRV 86

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 50.1 bits (121), Expect = 3e-07
 Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 13/89 (14%)

Query: 104 KAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC--- 158
           KA V  EP  P  L L  +    P  GEV I++ +  +   D      L  +G +P    
Sbjct: 2   KAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADL-----LQRQGLYPPPPG 56

Query: 159 ---VLGHEGSGIVESVGEGVTSVAPGDHV 184
              +LG E +G+V +VG GVT    GD V
Sbjct: 57  ASDILGLEVAGVVVAVGPGVTGWKVGDRV 85

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 49.1 bits (117), Expect = 9e-07
 Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 130 VRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHV-IPLY 188
           V +K+V+T IC +D + + G  +      VLGHE +G V   G  V  +  GD V +P  
Sbjct: 36  VILKVVTTNICGSDQHMVRG-RTTAPTGLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFN 94

Query: 189 IPQCNECKFCKSSKTNLC 206
           I  C  C+ CK   T +C
Sbjct: 95  I-ACGRCRNCKEGHTGVC 111

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 48.4 bits (116), Expect = 1e-06
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%)

Query: 115 LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL-DSEGKFPCVLGHEGSGIVESVGE 173
           L +    +  P AGEV +K+ ++ +   D     GL   +   P   G++  G V+++G 
Sbjct: 15  LKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGS 74

Query: 174 GVTSVAPGDHVIPLYI 189
           GVT    GD V  L  
Sbjct: 75  GVTGFEVGDRVAALTR 90

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 47.4 bits (113), Expect = 3e-06
 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 10/86 (11%)

Query: 110 EPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYT-----LDGLDSEGKFPC-----V 159
           +P + + LE + V     GEV + +++  + + + +      +    +  +        +
Sbjct: 25  DPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHI 84

Query: 160 LGHEGSGIVESVGEGVTSVAPGDHVI 185
            G + SGIV +VGEGV +   GD V+
Sbjct: 85  GGSDASGIVWAVGEGVKNWKVGDEVV 110

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 46.6 bits (112), Expect = 4e-06
 Identities = 15/29 (51%), Positives = 19/29 (65%)

Query: 157 PCVLGHEGSGIVESVGEGVTSVAPGDHVI 185
             VLG E +G+V  VG GVT +A GD V+
Sbjct: 23  EAVLGGECAGVVTRVGPGVTGLAVGDRVM 51

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 46.3 bits (110), Expect = 7e-06
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 11/87 (12%)

Query: 110 EPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAY--------TLDGLDSEGKFPC--- 158
           +P++ + LE + V     GEV + +++  + + + +        T   L   GK      
Sbjct: 20  DPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGKLDLPFH 79

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVI 185
           ++G + SG+V  VG GVT    GD V+
Sbjct: 80  IIGSDASGVVWRVGPGVTRWKVGDEVV 106

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 45.3 bits (108), Expect = 1e-05
 Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 13/92 (14%)

Query: 104 KAAVAWEPKKPLSLETIQVAPP--KAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC--- 158
           KA    EP  P  L  ++V  P  KAGEV I++ +  +   D      L   GK+P    
Sbjct: 2   KAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDL-----LQRAGKYPPPPG 56

Query: 159 ---VLGHEGSGIVESVGEGVTSVAPGDHVIPL 187
              +LG E +G V +VGEGV+    GD V  L
Sbjct: 57  ASDILGLEVAGEVVAVGEGVSRWKVGDRVCAL 88

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 1/70 (1%)

Query: 116 SLETIQVAPPKAGEVRIKIVSTAICHTDA-YTLDGLDSEGKFPCVLGHEGSGIVESVGEG 174
           S+  + V  P  GEV +K     I  +D  +T    D   K P   G EG G V +VGEG
Sbjct: 19  SIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEG 78

Query: 175 VTSVAPGDHV 184
           VT    GD V
Sbjct: 79  VTDFKVGDAV 88

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 44.3 bits (105), Expect = 3e-05
 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 11/79 (13%)

Query: 115 LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC------VLGHEGSGIV 168
           L +       PK  +V IK+ +  +   D      L  +GK+P       +LG E +G V
Sbjct: 16  LKIGESPKPAPKRNDVLIKVSAAGVNRADT-----LQRQGKYPPPPGSSEILGLEVAGYV 70

Query: 169 ESVGEGVTSVAPGDHVIPL 187
           E VG  V     GD V+ L
Sbjct: 71  EDVGSDVKRFKEGDRVMAL 89

Length = 334

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 43.9 bits (104), Expect = 4e-05
 Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 25/122 (20%)

Query: 101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDA-YTLDGL--DSEGKFP 157
           ++ ++ V    KK +++   ++     G   ++I    IC +D  Y  +G   +   K P
Sbjct: 3   VKTQSCVV-AGKKDVAVTEQEIEWNNNG-TLVQITRGGICGSDLHYYQEGKVGNFVIKAP 60

Query: 158 CVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQ---------CNECKFCKSSKTNLCTK 208
            VLGHE  G +      V S + G     L   Q         C  CK+C S   N CT 
Sbjct: 61  MVLGHEVIGKI------VHSDSSG-----LKEGQTVAINPSKPCGHCKYCLSHNENQCTT 109

Query: 209 IR 210
           +R
Sbjct: 110 MR 111

Length = 343

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 26/98 (26%), Positives = 37/98 (37%), Gaps = 15/98 (15%)

Query: 114 PLSLETIQVAPPKAGEVRIKIVSTAICHTD---------AYTLDGLDSEGKFPC--VLGH 162
           PL +  +    P  G+V +K+++  IC +D              G  S        VLGH
Sbjct: 10  PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGH 69

Query: 163 EGSGIVESVGEGVTS-VAPGDHV--IPLYI-PQCNECK 196
           E  G V   G G    +  G  V  +PL +  Q   C 
Sbjct: 70  EFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCG 107

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 3/51 (5%)

Query: 145 YTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHV---IPLYIPQC 192
                  S  +FP  LG + SG+V  +G GV S   GD V   +P +    
Sbjct: 62  KPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGT 112

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 10/87 (11%)

Query: 106 AVAWEPKKPL----SLETIQVAPPKAGE----VRIKIVSTAICHTDAYTLDGLDSEGKFP 157
           AV ++   P+    +L  I +  PK G     V +K +S  +   D      +  E   P
Sbjct: 2   AVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAIS--VNPVDTKVRARMAPEAGQP 59

Query: 158 CVLGHEGSGIVESVGEGVTSVAPGDHV 184
            +LG + +G+V +VG+ VT   PGD V
Sbjct: 60  KILGWDAAGVVVAVGDEVTLFKPGDEV 86

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 37.9 bits (88), Expect = 0.003
 Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 6/58 (10%)

Query: 159 VLGHEGSGIVESVGEGVTS------VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIR 210
           VLGHE  G V ++  G T       +  G  V+      C  C  C+      C  +R
Sbjct: 1   VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLR 58

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 37.5 bits (88), Expect = 0.004
 Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 9/73 (12%)

Query: 117 LETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGK----FPCVLGHEGSGIVESVG 172
           L T+ +     G+V I++  +++ + DA    G    G     +P   G + +G V S  
Sbjct: 17  LRTLPLDDLPEGDVLIRVHYSSLNYKDALAATG---NGGVTRNYPHTPGIDAAGTVVSS- 72

Query: 173 EGVTSVAPGDHVI 185
                   GD V+
Sbjct: 73  -DDPRFREGDEVL 84

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	261
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
KOG0023|consensus	360		99.96
KOG0024|consensus	354		99.95
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	99.95
PLN02740	381	Alcohol dehydrogenase-like	99.95
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	99.94
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	99.94
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	99.94
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	99.93
PLN02586	360	probable cinnamyl alcohol dehydrogenase	99.93
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	99.93
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	99.93
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	99.93
PLN02827	378	Alcohol dehydrogenase-like	99.93
KOG0022|consensus	375		99.93
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	99.92
PLN02514	357	cinnamyl-alcohol dehydrogenase	99.92
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	99.92
PLN02178	375	cinnamyl-alcohol dehydrogenase	99.91
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	99.91
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	99.91
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	99.9
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	99.9
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	99.89
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	99.89
KOG1197|consensus	336		99.89
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	99.89
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	99.89
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	99.88
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	99.88
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	99.88
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	99.88
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	99.88
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	99.88
PRK13771	334	putative alcohol dehydrogenase; Provisional	99.87
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	99.87
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	99.87
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	99.87
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	99.87
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	99.87
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	99.86
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	99.86
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	99.86
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	99.86
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	99.86
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	99.86
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	99.86
PRK10083	339	putative oxidoreductase; Provisional	99.86
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	99.85
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	99.85
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	99.85
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	99.85
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.85
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	99.84
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	99.84
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	99.83
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	99.83
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	99.83
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	99.83
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	99.83
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	99.82
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	99.82
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	99.81
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	99.81
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	99.81
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	99.81
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	99.81
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	99.81
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	99.81
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	99.81
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	99.8
PLN02702	364	L-idonate 5-dehydrogenase	99.8
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	99.8
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	99.8
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	99.8
KOG0025|consensus	354		99.79
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	99.79
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	99.79
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	99.78
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	99.77
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	99.77
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	99.77
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	99.76
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	99.76
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	99.76
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	99.75
PTZ00354	334	alcohol dehydrogenase; Provisional	99.75
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	99.75
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	99.74
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	99.74
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	99.73
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.73
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	99.73
cd08252	336	AL_MDR Arginate lyase and other MDR family members	99.72
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.72
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.72
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.72
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.71
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	99.71
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	99.71
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	99.7
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	99.7
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	99.69
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	99.68
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	99.68
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	99.68
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	99.67
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.67
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.66
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.66
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	99.66
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.65
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.63
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	99.63
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.63
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.62
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.6
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	99.6
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.57
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.53
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.51
KOG1198|consensus	347		99.48
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.42
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	98.93
COG2130	340	Putative NADP-dependent oxidoreductases [General f	98.9
KOG1202|consensus	2376		98.85
KOG1196|consensus	343		96.4
PTZ00414	100	10 kDa heat shock protein; Provisional	86.1
cd00320	93	cpn10 Chaperonin 10 Kd subunit (cpn10 or GroES); C	86.02
PRK00364	95	groES co-chaperonin GroES; Reviewed	84.37
PRK14533	91	groES co-chaperonin GroES; Provisional	80.36

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=1.5e-33  Score=248.45  Aligned_cols=159  Identities=31%  Similarity=0.433  Sum_probs=143.7

Q ss_pred             eeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCC
Q psy7798         101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAP  180 (261)
Q Consensus       101 ~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~v  180 (261)
                      ++|+++++.++++++++.+++.|.|+++||+|+|+|||+|++|+|.+.|.++...+|.++|||.+|+|++||++|++||+
T Consensus         2 ~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k~   81 (339)
T COG1064           2 MTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLKV   81 (339)
T ss_pred             cceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCCC
Confidence            57999999999999999999999999999999999999999999999999998889999999999999999999999999


Q ss_pred             CCEEEE-eeccCCCCCcccccCccccccccccc-----cceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhc
Q psy7798         181 GDHVIP-LYIPQCNECKFCKSSKTNLCTKIRTT-----QLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIK  254 (261)
Q Consensus       181 GDrV~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~  254 (261)
                      ||||.. +...+|++|.+|..+.+++|+.....     |||+.+.++...+.+++|+++++++||.+.+++.|.|.+|.+
T Consensus        82 GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~alk~  161 (339)
T COG1064          82 GDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKK  161 (339)
T ss_pred             CCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeehhh
Confidence            999976 77789999999999999999975433     445455555558899999999999999999999999999965


Q ss_pred             ccCccc
Q psy7798         255 RRDFEK  260 (261)
Q Consensus       255 ~a~L~~  260 (261)
                       +++++
T Consensus       162 -~~~~p  166 (339)
T COG1064         162 -ANVKP  166 (339)
T ss_pred             -cCCCC
Confidence             77654

>KOG0023|consensus

Probab=99.96  E-value=1.1e-28  Score=212.19  Aligned_cols=161  Identities=25%  Similarity=0.324  Sum_probs=141.3

Q ss_pred             CCcceeeeEEEEecCCC--CcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCC
Q psy7798          97 LPQVIECKAAVAWEPKK--PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEG  174 (261)
Q Consensus        97 ~~~~~~~~~~~~~~~g~--~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~  174 (261)
                      ...|.+.+++.+..+++  ++++.++++|+|+++||+|+|++||+|++|++.+.|.++...+|.++|||.+|+|++||++
T Consensus         4 ~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~   83 (360)
T KOG0023|consen    4 MSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSN   83 (360)
T ss_pred             ccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCC
Confidence            34566788899888887  5777999999999999999999999999999999999998889999999999999999999


Q ss_pred             CCCCCCCCEE-EEeeccCCCCCcccccCccccccc--ccc----------ccceeeeeeeecccccccCCCCChhhhccc
Q psy7798         175 VTSVAPGDHV-IPLYIPQCNECKFCKSSKTNLCTK--IRT----------TQLFLTSNVTISDFNMGYSMTGSLERGSKR  241 (261)
Q Consensus       175 v~~~~vGDrV-~~~~~~~~~~~~~~~~~~~~~~~~--~~~----------~~g~~~~~~~~~~~~~~~~~~~s~~eaA~l  241 (261)
                      |++||+|||| ++....+|..|++|..+.++.|++  ...          .|||+.+.++...+..++|+++..++||-+
T Consensus        84 V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPl  163 (360)
T KOG0023|consen   84 VTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPL  163 (360)
T ss_pred             cccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccch
Confidence            9999999999 667778999999999999999993  221          145666666666889999999999999999


Q ss_pred             cchHHHHHHHHhcccCc
Q psy7798         242 DNSFQTTHFAVIKRRDF  258 (261)
Q Consensus       242 p~~~~TA~~aL~~~a~L  258 (261)
                      .++..|+|.+|. ..++
T Consensus       164 LCaGITvYspLk-~~g~  179 (360)
T KOG0023|consen  164 LCAGITVYSPLK-RSGL  179 (360)
T ss_pred             hhcceEEeehhH-HcCC
Confidence            999999999995 4444

>KOG0024|consensus

Probab=99.95  E-value=7.6e-28  Score=207.48  Aligned_cols=156  Identities=28%  Similarity=0.389  Sum_probs=137.6

Q ss_pred             eeeEEEEecCCCCcEEEEeeCCCC-CCCeEEEEEEEEEcChhhHHHHcCCCCC---CCCCcccccceEEEEEEeCCCCCC
Q psy7798         102 ECKAAVAWEPKKPLSLETIQVAPP-KAGEVRIKIVSTAICHTDAYTLDGLDSE---GKFPCVLGHEGSGIVESVGEGVTS  177 (261)
Q Consensus       102 ~~~~~~~~~~g~~l~~~~~~~p~~-~~~eVlVkV~a~gln~~Dv~~~~g~~~~---~~~p~~lG~E~~G~V~~vG~~v~~  177 (261)
                      +|+++++.++++ +++.+.|.|++ +|+||+|+++++|||.+|+|.+......   .+.|.++|||.+|+|.+||+.|++
T Consensus         4 ~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~   82 (354)
T KOG0024|consen    4 DNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKH   82 (354)
T ss_pred             ccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccccc
Confidence            588999998887 89999999887 9999999999999999999998754332   347899999999999999999999


Q ss_pred             CCCCCEEEEeeccCCCCCcccccCccccccccccc------cceeeeeeeecccccccCCCCChhhhccccchHHHHHHH
Q psy7798         178 VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTT------QLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFA  251 (261)
Q Consensus       178 ~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~a  251 (261)
                      +||||||+.-+..+|+.|.+|+.|++|.|+.....      |++..+++...+.++++|++++|+++|-+- .+.++|+|
T Consensus        83 LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~e-PLsV~~HA  161 (354)
T KOG0024|consen   83 LKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIE-PLSVGVHA  161 (354)
T ss_pred             cccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhccccc-chhhhhhh
Confidence            99999999999999999999999999999976544      677777788779999999999999999664 59999999


Q ss_pred             HhcccCccc
Q psy7798         252 VIKRRDFEK  260 (261)
Q Consensus       252 L~~~a~L~~  260 (261)
                      . .++++++
T Consensus       162 c-r~~~vk~  169 (354)
T KOG0024|consen  162 C-RRAGVKK  169 (354)
T ss_pred             h-hhcCccc
Confidence            8 6777764

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=99.95  E-value=1.8e-27  Score=206.73  Aligned_cols=159  Identities=48%  Similarity=0.784  Sum_probs=142.9

Q ss_pred             eeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCC
Q psy7798         101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAP  180 (261)
Q Consensus       101 ~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~v  180 (261)
                      |.+++++..++++||+++++..++|++|||+||+.|+|+|++|.++..|..|.. +|.++|||++|+|.+||++|+++|+
T Consensus         1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp   79 (366)
T COG1062           1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP   79 (366)
T ss_pred             CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence            357899999999999999999999999999999999999999999999999976 9999999999999999999999999


Q ss_pred             CCEEEEeeccCCCCCcccccCccccccccccc--------------------------cceeeeeeeecccccccCCCCC
Q psy7798         181 GDHVIPLYIPQCNECKFCKSSKTNLCTKIRTT--------------------------QLFLTSNVTISDFNMGYSMTGS  234 (261)
Q Consensus       181 GDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~g~~~~~~~~~~~~~~~~~~~s  234 (261)
                      ||.|+..+...||+|..|..+..++|.....+                          +.|.++.++....+.+++++..
T Consensus        80 GDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p  159 (366)
T COG1062          80 GDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAP  159 (366)
T ss_pred             CCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCCC
Confidence            99999998889999999999999999843211                          1344455555577889999999


Q ss_pred             hhhhccccchHHHHHHHHhcccCccc
Q psy7798         235 LERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       235 ~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      ++.++-+.++..|.+-+.++.+++++
T Consensus       160 ~~~a~llGCgV~TG~Gav~nta~v~~  185 (366)
T COG1062         160 LEKACLLGCGVTTGIGAVVNTAKVEP  185 (366)
T ss_pred             ccceEEEeeeeccChHHhhhcccCCC
Confidence            99999999999999999999998874

>PLN02740 Alcohol dehydrogenase-like

Probab=99.95  E-value=9.6e-27  Score=212.27  Aligned_cols=164  Identities=42%  Similarity=0.704  Sum_probs=141.9

Q ss_pred             CCcceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCC
Q psy7798          97 LPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGV  175 (261)
Q Consensus        97 ~~~~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v  175 (261)
                      .+.+++|+++++.++++++.+++++.|.|+++||+|||+++|||++|++.+.|.++. ..+|.++|||++|+|+++|++|
T Consensus         5 ~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v   84 (381)
T PLN02740          5 QGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGV   84 (381)
T ss_pred             cccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCC
Confidence            345678999999998877899999999999999999999999999999999987642 3468899999999999999999


Q ss_pred             CCCCCCCEEEEeeccCCCCCcccccCcccccccccc-----------------------------ccceeeeeeeecccc
Q psy7798         176 TSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT-----------------------------TQLFLTSNVTISDFN  226 (261)
Q Consensus       176 ~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~g~~~~~~~~~~~~  226 (261)
                      ++|++||||++.+..+|+.|.+|..+..+.|.....                             .|++.++..+.....
T Consensus        85 ~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~  164 (381)
T PLN02740         85 EDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACV  164 (381)
T ss_pred             CcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHe
Confidence            999999999998888999999999999999986431                             244445555555778


Q ss_pred             cccCCCCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         227 MGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       227 ~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      .++|++++++++|.+++++.|||+++.+.+++++
T Consensus       165 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~  198 (381)
T PLN02740        165 VKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQA  198 (381)
T ss_pred             EECCCCCCHHHhhhhcccchhhHHHHHhccCCCC
Confidence            8999999999999999999999999988787764

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=99.94  E-value=1.5e-26  Score=210.06  Aligned_cols=158  Identities=47%  Similarity=0.778  Sum_probs=137.8

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGD  182 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGD  182 (261)
                      |+++++...++.+++++++.|.|+++||+|||+++|+|++|++...|.++...+|.++|||++|+|+++|++|++|++||
T Consensus         2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd   81 (368)
T TIGR02818         2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD   81 (368)
T ss_pred             ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence            78888888888899999999999999999999999999999999999876556789999999999999999999999999


Q ss_pred             EEEEeeccCCCCCcccccCcccccccccc--------------------------ccceeeeeeeecccccccCCCCChh
Q psy7798         183 HVIPLYIPQCNECKFCKSSKTNLCTKIRT--------------------------TQLFLTSNVTISDFNMGYSMTGSLE  236 (261)
Q Consensus       183 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~g~~~~~~~~~~~~~~~~~~~s~~  236 (261)
                      ||++.+..+|+.|.+|..+..+.|.....                          .|++.++..++.....++|++++++
T Consensus        82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~~  161 (368)
T TIGR02818        82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLE  161 (368)
T ss_pred             EEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCCCHH
Confidence            99988878999999999999999976321                          1344444455557788999999999


Q ss_pred             hhccccchHHHHHHHHhcccCccc
Q psy7798         237 RGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       237 eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      ++|.+++++.|||+++.+++++++
T Consensus       162 ~aa~l~~~~~ta~~a~~~~~~~~~  185 (368)
T TIGR02818       162 EVCLLGCGVTTGIGAVLNTAKVEE  185 (368)
T ss_pred             HhhhhcchhHHHHHHHHHhcCCCC
Confidence            999999999999999988777753

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=99.94  E-value=2.6e-26  Score=208.40  Aligned_cols=159  Identities=43%  Similarity=0.726  Sum_probs=139.3

Q ss_pred             eeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCC
Q psy7798         102 ECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       102 ~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      +|+++++.++++++++++++.|+|+++||+|||.++|||++|++...|..+...+|.++|||++|+|+++|++|++|++|
T Consensus         2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   81 (369)
T cd08301           2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKPG   81 (369)
T ss_pred             ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCccccC
Confidence            68999999888889999999999999999999999999999999999877655678999999999999999999999999


Q ss_pred             CEEEEeeccCCCCCcccccCcccccccccc--------------------------c-cceeeeeeeecccccccCCCCC
Q psy7798         182 DHVIPLYIPQCNECKFCKSSKTNLCTKIRT--------------------------T-QLFLTSNVTISDFNMGYSMTGS  234 (261)
Q Consensus       182 DrV~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~-~g~~~~~~~~~~~~~~~~~~~s  234 (261)
                      |||++.+...|+.|.+|..+..+.|.....                          . |++.++..+......++|++++
T Consensus        82 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~  161 (369)
T cd08301          82 DHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAP  161 (369)
T ss_pred             CEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCCC
Confidence            999998888999999999999999977521                          1 3344444555577889999999


Q ss_pred             hhhhccccchHHHHHHHHhcccCccc
Q psy7798         235 LERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       235 ~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      ++++|.+++++.|||+++.+.+++++
T Consensus       162 ~~~aa~~~~~~~ta~~~~~~~~~~~~  187 (369)
T cd08301         162 LDKVCLLSCGVSTGLGAAWNVAKVKK  187 (369)
T ss_pred             HHHhhhhcchhhHHHHHHHhhcCCCC
Confidence            99999999999999999988777754

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=99.94  E-value=8e-26  Score=205.22  Aligned_cols=159  Identities=58%  Similarity=0.937  Sum_probs=138.3

Q ss_pred             eeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCC
Q psy7798         102 ECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       102 ~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      +|+++++...++++++++.+.|.|+++||+|||+++|||++|++...|.++...+|.++|||++|+|+++|++|++|++|
T Consensus         2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG   81 (368)
T cd08300           2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG   81 (368)
T ss_pred             cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence            57888888888889999999999999999999999999999999999987655678999999999999999999999999


Q ss_pred             CEEEEeeccCCCCCcccccCcccccccccc--------------------------ccceeeeeeeecccccccCCCCCh
Q psy7798         182 DHVIPLYIPQCNECKFCKSSKTNLCTKIRT--------------------------TQLFLTSNVTISDFNMGYSMTGSL  235 (261)
Q Consensus       182 DrV~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~g~~~~~~~~~~~~~~~~~~~s~  235 (261)
                      |||++.+...|+.|.+|..+..+.|.....                          .|++.++..+......++|+++++
T Consensus        82 drV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~  161 (368)
T cd08300          82 DHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPL  161 (368)
T ss_pred             CEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCCCh
Confidence            999988878999999999999999975421                          124444445555778899999999


Q ss_pred             hhhccccchHHHHHHHHhcccCccc
Q psy7798         236 ERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       236 ~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      ++++.++.+++|||+++.+.+++++
T Consensus       162 ~~aa~l~~~~~ta~~a~~~~~~~~~  186 (368)
T cd08300         162 DKVCLLGCGVTTGYGAVLNTAKVEP  186 (368)
T ss_pred             hhhhhhccchhhhHHHHHHhcCCCC
Confidence            9999999999999999988777753

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=99.93  E-value=1.4e-25  Score=203.92  Aligned_cols=157  Identities=31%  Similarity=0.544  Sum_probs=134.0

Q ss_pred             eeEEEEecCC--------CCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCC
Q psy7798         103 CKAAVAWEPK--------KPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEG  174 (261)
Q Consensus       103 ~~~~~~~~~g--------~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~  174 (261)
                      ||++++.++|        +.+++++.+.|.|+++||+|||.++|||++|++...|.++ ..+|.++|||++|+|+++|++
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~   79 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG   79 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence            6778877765        3489999999999999999999999999999999998765 346889999999999999999


Q ss_pred             CCCCCCCCEEEEeeccCCCCCcccccCcccccccccc--------------------------ccceeeeeeeecccccc
Q psy7798         175 VTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT--------------------------TQLFLTSNVTISDFNMG  228 (261)
Q Consensus       175 v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~g~~~~~~~~~~~~~~  228 (261)
                      |++|++||||++.+...|+.|..|..+..+.|.....                          .|++.++..+......+
T Consensus        80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~  159 (371)
T cd08281          80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVK  159 (371)
T ss_pred             CCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceEE
Confidence            9999999999987767899999999999999976421                          13444444555577889


Q ss_pred             cCCCCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         229 YSMTGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       229 ~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      +|+++++++||.++++++|||+++.+.+++++
T Consensus       160 lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~  191 (371)
T cd08281         160 IDKDVPLEIAALFGCAVLTGVGAVVNTAGVRP  191 (371)
T ss_pred             CCCCCChHHhhhhcchHHHHHHHHHhccCCCC
Confidence            99999999999999999999999988887764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=99.93  E-value=1.4e-25  Score=203.28  Aligned_cols=160  Identities=22%  Similarity=0.252  Sum_probs=134.1

Q ss_pred             cceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCC
Q psy7798          99 QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSV  178 (261)
Q Consensus        99 ~~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~  178 (261)
                      .|+.++++...+..+.+++.+++.|.|+++||+|||.++|||++|++.+.|.++...+|.++|||++|+|+++|++|++|
T Consensus         9 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~   88 (360)
T PLN02586          9 HPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKF   88 (360)
T ss_pred             chhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCcc
Confidence            45667777777776778888999999999999999999999999999998876544568899999999999999999999


Q ss_pred             CCCCEEEEee-ccCCCCCcccccCcccccccccc------------ccceeeeeeeecccccccCCCCChhhhccccchH
Q psy7798         179 APGDHVIPLY-IPQCNECKFCKSSKTNLCTKIRT------------TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSF  245 (261)
Q Consensus       179 ~vGDrV~~~~-~~~~~~~~~~~~~~~~~~~~~~~------------~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~  245 (261)
                      ++||||++.+ ..+|+.|.+|..+..+.|.....            .|++.++.++......++|+++++++||.+++++
T Consensus        89 ~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~  168 (360)
T PLN02586         89 KEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAG  168 (360)
T ss_pred             CCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcch
Confidence            9999998543 35799999999999999986421            2445455555557788999999999999999999


Q ss_pred             HHHHHHHhcccCc
Q psy7798         246 QTTHFAVIKRRDF  258 (261)
Q Consensus       246 ~TA~~aL~~~a~L  258 (261)
                      +|||+++...+.+
T Consensus       169 ~ta~~al~~~~~~  181 (360)
T PLN02586        169 ITVYSPMKYYGMT  181 (360)
T ss_pred             HHHHHHHHHhccc
Confidence            9999999765544

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=99.93  E-value=1.5e-25  Score=200.07  Aligned_cols=139  Identities=24%  Similarity=0.297  Sum_probs=118.6

Q ss_pred             eeEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCC-CCCCCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         103 CKAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL-DSEGKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       103 ~~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~-~~~~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      |+++.+...+++  +++.+++.|.|++|||+|||+|+|||+.|++...|. .+...+|+++|.|++|+|+++|++|+.|+
T Consensus         1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~   80 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK   80 (326)
T ss_pred             CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence            577888877755  889999999999999999999999999999999997 34456899999999999999999999999


Q ss_pred             CCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCcc
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFE  259 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~  259 (261)
                      +||||+... ..|                  ..|+++++..++.....++|+++|+++||++|++++|||++|+..++|+
T Consensus        81 ~GdrV~~~~-~~~------------------~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~  141 (326)
T COG0604          81 VGDRVAALG-GVG------------------RDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLK  141 (326)
T ss_pred             CCCEEEEcc-CCC------------------CCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            999999864 110                  1144555555555788999999999999999999999999999988887


Q ss_pred             c
Q psy7798         260 K  260 (261)
Q Consensus       260 ~  260 (261)
                      +
T Consensus       142 ~  142 (326)
T COG0604         142 P  142 (326)
T ss_pred             C
Confidence            4

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=99.93  E-value=2.4e-25  Score=201.32  Aligned_cols=158  Identities=28%  Similarity=0.472  Sum_probs=137.7

Q ss_pred             eeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCC
Q psy7798         102 ECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       102 ~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      +||++++.++++++++++.+.|.|+++||+|||.++|+|++|++...|.++ ..+|.++|||++|+|+++|++|++|++|
T Consensus         1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G   79 (358)
T TIGR03451         1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPG   79 (358)
T ss_pred             CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCC
Confidence            589999999998899999999999999999999999999999999988764 3467899999999999999999999999


Q ss_pred             CEEEEeeccCCCCCcccccCccccccccc------------------cccceeeeeeeecccccccCCCCChhhhccccc
Q psy7798         182 DHVIPLYIPQCNECKFCKSSKTNLCTKIR------------------TTQLFLTSNVTISDFNMGYSMTGSLERGSKRDN  243 (261)
Q Consensus       182 DrV~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~  243 (261)
                      |||++.+..+|+.|..|..+..+.|....                  ..|++.++..+......++|+++++++||.+++
T Consensus        80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~  159 (358)
T TIGR03451        80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGC  159 (358)
T ss_pred             CEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhhcc
Confidence            99998888899999999999999997421                  124455555555577889999999999999999


Q ss_pred             hHHHHHHHHhcccCccc
Q psy7798         244 SFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       244 ~~~TA~~aL~~~a~L~~  260 (261)
                      +++|||+++.+.+++++
T Consensus       160 ~~~ta~~~~~~~~~~~~  176 (358)
T TIGR03451       160 GVMAGLGAAVNTGGVKR  176 (358)
T ss_pred             cchhhHHHHHhccCCCC
Confidence            99999999988777653

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=99.93  E-value=3.6e-25  Score=200.74  Aligned_cols=158  Identities=49%  Similarity=0.827  Sum_probs=137.9

Q ss_pred             eeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCC
Q psy7798         102 ECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       102 ~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      .|+++++.+.+++++++++|.|.|+++||+|||.++|+|++|++...|.++ ..+|.++|||++|+|+++|++|++|++|
T Consensus         2 ~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G   80 (365)
T cd08277           2 KCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKPG   80 (365)
T ss_pred             ccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCCC
Confidence            478888888887799999999999999999999999999999999998765 4567899999999999999999999999


Q ss_pred             CEEEEeeccCCCCCcccccCcccccccccc-------------------------ccceeeeeeeecccccccCCCCChh
Q psy7798         182 DHVIPLYIPQCNECKFCKSSKTNLCTKIRT-------------------------TQLFLTSNVTISDFNMGYSMTGSLE  236 (261)
Q Consensus       182 DrV~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~g~~~~~~~~~~~~~~~~~~~s~~  236 (261)
                      |||++.+..+|++|.+|..+..+.|.....                         .|++.++........+++|++++++
T Consensus        81 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~  160 (365)
T cd08277          81 DKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLE  160 (365)
T ss_pred             CEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCCHH
Confidence            999998888999999999999999975421                         2344455555557888999999999


Q ss_pred             hhccccchHHHHHHHHhcccCccc
Q psy7798         237 RGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       237 eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      ++|.++++++|||+++.+.+++++
T Consensus       161 ~aa~l~~~~~ta~~~~~~~~~~~~  184 (365)
T cd08277         161 HVCLLGCGFSTGYGAAWNTAKVEP  184 (365)
T ss_pred             HhhHhcchhHHHHHHHHhhcCCCC
Confidence            999999999999999988877764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PLN02827 Alcohol dehydrogenase-like

Probab=99.93  E-value=5.7e-25  Score=200.49  Aligned_cols=160  Identities=36%  Similarity=0.632  Sum_probs=136.2

Q ss_pred             CcceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCC
Q psy7798          98 PQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTS  177 (261)
Q Consensus        98 ~~~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~  177 (261)
                      +....|+++++.++++.+++.+.+.|.|+++||+|||.++|||++|++...|..   .+|.++|||++|+|+++|++|++
T Consensus         8 ~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~   84 (378)
T PLN02827          8 PNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTE   84 (378)
T ss_pred             cccceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcc
Confidence            344569999998888779999999999999999999999999999999987742   34689999999999999999999


Q ss_pred             CCCCCEEEEeeccCCCCCcccccCcccccccccc--------------------------ccceeeeeeeecccccccCC
Q psy7798         178 VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT--------------------------TQLFLTSNVTISDFNMGYSM  231 (261)
Q Consensus       178 ~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~g~~~~~~~~~~~~~~~~~  231 (261)
                      |++||||++.+..+|++|.+|..+..+.|.....                          .|++.++..+......++|+
T Consensus        85 ~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~  164 (378)
T PLN02827         85 FEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDP  164 (378)
T ss_pred             cCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCC
Confidence            9999999998888999999999999999976321                          13444444555577889999


Q ss_pred             CCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         232 TGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       232 ~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      +++++++|.+++++.|||+++.+.+++++
T Consensus       165 ~l~~~~aa~l~~~~~~a~~~~~~~~~~~~  193 (378)
T PLN02827        165 LAPLHKICLLSCGVAAGLGAAWNVADVSK  193 (378)
T ss_pred             CCCHHHhhhhcchhHhhHHHHHhhcCCCC
Confidence            99999999999999999998877777653

>KOG0022|consensus

Probab=99.93  E-value=2.8e-25  Score=190.62  Aligned_cols=163  Identities=53%  Similarity=0.846  Sum_probs=146.5

Q ss_pred             CcceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCC
Q psy7798          98 PQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTS  177 (261)
Q Consensus        98 ~~~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~  177 (261)
                      ..+.++|+++.+++++||.++++..++|+.+||+||+.++|+|++|.+.+.|..+...+|.++|||++|+|..||++|++
T Consensus         3 gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~   82 (375)
T KOG0022|consen    3 GKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTT   82 (375)
T ss_pred             CCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccc
Confidence            35578999999999999999999999999999999999999999999999998888889999999999999999999999


Q ss_pred             CCCCCEEEEeeccCCCCCcccccCcccccccccccc--------------------------ceeeeeeeec-ccccccC
Q psy7798         178 VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ--------------------------LFLTSNVTIS-DFNMGYS  230 (261)
Q Consensus       178 ~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------g~~~~~~~~~-~~~~~~~  230 (261)
                      +++||+|+......|+.|.+|..+..|.|...+...                          .++++|.+++ ...++++
T Consensus        83 vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId  162 (375)
T KOG0022|consen   83 VKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKID  162 (375)
T ss_pred             cCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecC
Confidence            999999999998999999999999999997653221                          1445565555 6678888


Q ss_pred             CCCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         231 MTGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       231 ~~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      +...++.++-+.+++.|.|-|..+.|++++
T Consensus       163 ~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~  192 (375)
T KOG0022|consen  163 PSAPLEKVCLLGCGVSTGYGAAWNTAKVEP  192 (375)
T ss_pred             CCCChhheeEeeccccccchhhhhhcccCC
Confidence            999999999999999999999999999875

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=99.92  E-value=1.3e-24  Score=194.82  Aligned_cols=155  Identities=23%  Similarity=0.298  Sum_probs=131.9

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      |+++++.+++ .+++++++.|.|+++||+|||.++|+|++|++...|.++. ...|.++|||++|+|+++|++|++|++|
T Consensus         1 mka~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   79 (339)
T cd08239           1 MRGAVFPGDR-TVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG   79 (339)
T ss_pred             CeEEEEecCC-ceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence            6788887665 4899999999999999999999999999999998776432 2347899999999999999999999999


Q ss_pred             CEEEEeeccCCCCCcccccCcccccccccc------ccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcc
Q psy7798         182 DHVIPLYIPQCNECKFCKSSKTNLCTKIRT------TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKR  255 (261)
Q Consensus       182 DrV~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~  255 (261)
                      |||+..+...|+.|..|..+..+.|.....      .|++.++..+......++|+++++++|++++.+++|||++|. .
T Consensus        80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~-~  158 (339)
T cd08239          80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHALR-R  158 (339)
T ss_pred             CEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHH-h
Confidence            999998888999999999999999986542      244555555555788999999999999999999999999984 4


Q ss_pred             cCcc
Q psy7798         256 RDFE  259 (261)
Q Consensus       256 a~L~  259 (261)
                      ++++
T Consensus       159 ~~~~  162 (339)
T cd08239         159 VGVS  162 (339)
T ss_pred             cCCC
Confidence            5554

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=99.92  E-value=1.8e-24  Score=195.69  Aligned_cols=159  Identities=25%  Similarity=0.243  Sum_probs=135.9

Q ss_pred             ceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         100 VIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       100 ~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      ...+++++...+++++.+.+++.|.|+++||+|||.++|||++|++...|.++...+|.++|||++|+|+++|++|++|+
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~   86 (357)
T PLN02514          7 EKKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFT   86 (357)
T ss_pred             CceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCccccc
Confidence            34588999999999899999999999999999999999999999999988765445678999999999999999999999


Q ss_pred             CCCEEEEee-ccCCCCCcccccCccccccccc------------cccceeeeeeeecccccccCCCCChhhhccccchHH
Q psy7798         180 PGDHVIPLY-IPQCNECKFCKSSKTNLCTKIR------------TTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQ  246 (261)
Q Consensus       180 vGDrV~~~~-~~~~~~~~~~~~~~~~~~~~~~------------~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~  246 (261)
                      +||+|+..+ ...|++|..|..+..+.|....            ..|++.++.++......++|++++++++|+++.++.
T Consensus        87 ~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~  166 (357)
T PLN02514         87 VGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGV  166 (357)
T ss_pred             CCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHH
Confidence            999997543 3479999999999999997631            124555555555577889999999999999999999


Q ss_pred             HHHHHHhcccCc
Q psy7798         247 TTHFAVIKRRDF  258 (261)
Q Consensus       247 TA~~aL~~~a~L  258 (261)
                      |||++|...+.+
T Consensus       167 ta~~al~~~~~~  178 (357)
T PLN02514        167 TVYSPLSHFGLK  178 (357)
T ss_pred             HHHHHHHHcccC
Confidence            999999766544

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=99.92  E-value=1.7e-24  Score=198.27  Aligned_cols=155  Identities=21%  Similarity=0.293  Sum_probs=127.9

Q ss_pred             eeeEEEEecCCCCcEEEEeeCCCCC-------CCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCC
Q psy7798         102 ECKAAVAWEPKKPLSLETIQVAPPK-------AGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEG  174 (261)
Q Consensus       102 ~~~~~~~~~~g~~l~~~~~~~p~~~-------~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~  174 (261)
                      .|+++++.+++. +++++++.|.|+       +|||+|||.++|||++|++.+.|.++ ..+|.++|||++|+|+++|++
T Consensus         2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~   79 (393)
T TIGR02819         2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRD   79 (393)
T ss_pred             CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCc
Confidence            478898888775 889999988874       68999999999999999999998754 346899999999999999999


Q ss_pred             CCCCCCCCEEEEeeccCCCCCcccccCcccccccccc--------------ccceeeeeeeecc---cccccCCCCCh--
Q psy7798         175 VTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT--------------TQLFLTSNVTISD---FNMGYSMTGSL--  235 (261)
Q Consensus       175 v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~g~~~~~~~~~~---~~~~~~~~~s~--  235 (261)
                      |++|++||||++.+...|+.|.+|..+..+.|.....              ..|.+++|+.++.   ..+++|++++.  
T Consensus        80 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~~~  159 (393)
T TIGR02819        80 VEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQALE  159 (393)
T ss_pred             cccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCcccccc
Confidence            9999999999988878899999999999999986320              1255566666663   47889987653  


Q ss_pred             --hhhccccchHHHHHHHHhcccCcc
Q psy7798         236 --ERGSKRDNSFQTTHFAVIKRRDFE  259 (261)
Q Consensus       236 --~eaA~lp~~~~TA~~aL~~~a~L~  259 (261)
                        ++++++...++|||+++. +++++
T Consensus       160 ~~~~~a~l~~~~~ta~~a~~-~~~~~  184 (393)
T TIGR02819       160 KIRDLTMLSDIFPTGYHGAV-TAGVG  184 (393)
T ss_pred             cccceeeeccHHHHHHHHHH-hcCCC
Confidence              457888889999999984 56554

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=99.91  E-value=7.3e-24  Score=193.02  Aligned_cols=152  Identities=22%  Similarity=0.253  Sum_probs=126.7

Q ss_pred             EEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCEE
Q psy7798         105 AAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHV  184 (261)
Q Consensus       105 ~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGDrV  184 (261)
                      ++...+.++.+.+.+++.|.|+++||+|||.++|||++|++...|.++...+|.++|||++|+|+++|++|++|++||||
T Consensus         9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV   88 (375)
T PLN02178          9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV   88 (375)
T ss_pred             EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence            44455555668888889999999999999999999999999999876444567899999999999999999999999999


Q ss_pred             EEeec-cCCCCCcccccCcccccccccc------------ccceeeeeeeecccccccCCCCChhhhccccchHHHHHHH
Q psy7798         185 IPLYI-PQCNECKFCKSSKTNLCTKIRT------------TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFA  251 (261)
Q Consensus       185 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~------------~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~a  251 (261)
                      +..+. ..|+.|.+|..+..+.|+....            .|++.++..+......++|+++++++||.++++++|||++
T Consensus        89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~a  168 (375)
T PLN02178         89 GVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSP  168 (375)
T ss_pred             EEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHH
Confidence            85443 3699999999999999986531            2445555555557788999999999999999999999999


Q ss_pred             Hhccc
Q psy7798         252 VIKRR  256 (261)
Q Consensus       252 L~~~a  256 (261)
                      +...+
T Consensus       169 l~~~~  173 (375)
T PLN02178        169 MKYYG  173 (375)
T ss_pred             HHHhC
Confidence            86543

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=99.91  E-value=1.9e-23  Score=190.17  Aligned_cols=159  Identities=47%  Similarity=0.761  Sum_probs=137.9

Q ss_pred             eeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCC
Q psy7798         101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAP  180 (261)
Q Consensus       101 ~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~v  180 (261)
                      ..|+++++..+++++++++.|.|.|.++||+|||.++|+|++|++...|.++ ..+|.++|||++|+|+++|++|+.|++
T Consensus         6 ~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~   84 (373)
T cd08299           6 IKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVKP   84 (373)
T ss_pred             ceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccCCC
Confidence            3588999888887899999999999999999999999999999999988764 346789999999999999999999999


Q ss_pred             CCEEEEeeccCCCCCcccccCcccccccccc--------------------------ccceeeeeeeecccccccCCCCC
Q psy7798         181 GDHVIPLYIPQCNECKFCKSSKTNLCTKIRT--------------------------TQLFLTSNVTISDFNMGYSMTGS  234 (261)
Q Consensus       181 GDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~g~~~~~~~~~~~~~~~~~~~s  234 (261)
                      ||+|++++..+|+.|.+|..+..+.|.....                          .|++.++..+......++|++++
T Consensus        85 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l~  164 (373)
T cd08299          85 GDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAP  164 (373)
T ss_pred             CCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCCC
Confidence            9999988888999999999999999975431                          23444555555577889999999


Q ss_pred             hhhhccccchHHHHHHHHhcccCccc
Q psy7798         235 LERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       235 ~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      +++++.++++++|||+++...+++++
T Consensus       165 ~~~aa~~~~~~~ta~~~~~~~~~~~~  190 (373)
T cd08299         165 LEKVCLIGCGFSTGYGAAVNTAKVTP  190 (373)
T ss_pred             hHHhheeccchHHHHHHHHhccCCCC
Confidence            99999999999999999988887764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=99.91  E-value=1.2e-23  Score=188.23  Aligned_cols=146  Identities=21%  Similarity=0.277  Sum_probs=124.6

Q ss_pred             CcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCEEEEee-ccCC
Q psy7798         114 PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLY-IPQC  192 (261)
Q Consensus       114 ~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGDrV~~~~-~~~~  192 (261)
                      .++++++|.|.|+++||+|||.++|+|++|++...|.++...+|.++|||++|+|+++|++|++|++||||+..+ ...|
T Consensus        14 ~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c   93 (329)
T TIGR02822        14 PLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTC   93 (329)
T ss_pred             CceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCCCEEEEcCccCcC
Confidence            488999999999999999999999999999999999776444578999999999999999999999999997654 3479


Q ss_pred             CCCcccccCcccccccccc-----ccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         193 NECKFCKSSKTNLCTKIRT-----TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      +.|.+|..+..+.|+....     .|++..+..++.....++|+++++++++.++.+++|||+++. .+++++
T Consensus        94 ~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~-~~~~~~  165 (329)
T TIGR02822        94 GVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALL-RASLPP  165 (329)
T ss_pred             CCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHH-hcCCCC
Confidence            9999999999999986432     244555555555788999999999999999999999999995 566653

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=99.90  E-value=5.1e-23  Score=185.87  Aligned_cols=147  Identities=23%  Similarity=0.355  Sum_probs=117.8

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC---CCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE---GKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~---~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      |+++++...+..+++.++|.|+|+++||+|||+++|||++|++.+.|.++.   ...|.++|||++|+|+++|++ ++|+
T Consensus         1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~   79 (355)
T cd08230           1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS   79 (355)
T ss_pred             CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence            567777654444999999999999999999999999999999999987542   235789999999999999999 9999


Q ss_pred             CCCEEEEeeccCCCCCcccccCcccccccccc--------ccceeeeeeeecccccccCCCCChhhhccccchHHHHHHH
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT--------TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFA  251 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~a  251 (261)
                      +||||++.+...|+.|.+|..+..+.|.....        .|++.++.++....++++|++++  +++++..++.+++.+
T Consensus        80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~--~~a~~~~p~~~~~~a  157 (355)
T cd08230          80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA--DVGVLLEPLSVVEKA  157 (355)
T ss_pred             CCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC--cceeecchHHHHHHH
Confidence            99999988878899999999999999975321        24455555666688899999998  445555555555444


Q ss_pred             H
Q psy7798         252 V  252 (261)
Q Consensus       252 L  252 (261)
                      +
T Consensus       158 ~  158 (355)
T cd08230         158 I  158 (355)
T ss_pred             H
Confidence            4

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=99.90  E-value=1.1e-22  Score=183.90  Aligned_cols=155  Identities=23%  Similarity=0.347  Sum_probs=133.6

Q ss_pred             eEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCC------
Q psy7798         104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTS------  177 (261)
Q Consensus       104 ~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~------  177 (261)
                      |++++.++++.+++.+.+.|.|+++||+|+|.++|+|+.|++...|.++...+|.++|+|++|+|+++|++|++      
T Consensus         2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~   81 (361)
T cd08231           2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP   81 (361)
T ss_pred             eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence            57888888877999999999999999999999999999999999997753456789999999999999999986      


Q ss_pred             CCCCCEEEEeeccCCCCCcccccCcccccccccc-----------ccceeeeeeeecc--cccccCCCCChhhhccccch
Q psy7798         178 VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT-----------TQLFLTSNVTISD--FNMGYSMTGSLERGSKRDNS  244 (261)
Q Consensus       178 ~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~g~~~~~~~~~~--~~~~~~~~~s~~eaA~lp~~  244 (261)
                      |++||+|++.+..+|+.|.+|..+..+.|.....           ..|.+++++.++.  ...++|+++++++++.++.+
T Consensus        82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~  161 (361)
T cd08231          82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCA  161 (361)
T ss_pred             cCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHhcCH
Confidence            9999999999888999999999999999975422           1244556655553  58899999999999999999


Q ss_pred             HHHHHHHHhcccCc
Q psy7798         245 FQTTHFAVIKRRDF  258 (261)
Q Consensus       245 ~~TA~~aL~~~a~L  258 (261)
                      ++|||++|.+.+.+
T Consensus       162 ~~ta~~al~~~~~~  175 (361)
T cd08231         162 LATVLAALDRAGPV  175 (361)
T ss_pred             HHHHHHHHHhccCC
Confidence            99999999776655

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=99.89  E-value=1.3e-22  Score=183.99  Aligned_cols=158  Identities=35%  Similarity=0.528  Sum_probs=135.1

Q ss_pred             eeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCC
Q psy7798         101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAP  180 (261)
Q Consensus       101 ~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~v  180 (261)
                      |+|+++++.++++++++.+.+.|.++++||+|||.++|+|++|++...|.++ ...|.++|+|++|+|+++|+++.+|++
T Consensus         1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~   79 (365)
T cd08278           1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP   79 (365)
T ss_pred             CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence            4689999988777789999999999999999999999999999999998765 345789999999999999999999999


Q ss_pred             CCEEEEeeccCCCCCcccccCcccccccccc----------------------------ccceeeeeeeecccccccCCC
Q psy7798         181 GDHVIPLYIPQCNECKFCKSSKTNLCTKIRT----------------------------TQLFLTSNVTISDFNMGYSMT  232 (261)
Q Consensus       181 GDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~g~~~~~~~~~~~~~~~~~~  232 (261)
                      ||+|++.. ..|+.|.+|..+..+.|.....                            .|++.++.........++|++
T Consensus        80 Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~  158 (365)
T cd08278          80 GDHVVLSF-ASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD  158 (365)
T ss_pred             CCEEEEcc-cCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence            99999866 4899999999999999864321                            133444444555778899999


Q ss_pred             CChhhhccccchHHHHHHHHhcccCccc
Q psy7798         233 GSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       233 ~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      +++++++.++++++|||+++++.+++++
T Consensus       159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~  186 (365)
T cd08278         159 VPLELLAPLGCGIQTGAGAVLNVLKPRP  186 (365)
T ss_pred             CCHHHhhhhcchhhhhhHHHhhhcCCCC
Confidence            9999999999999999999988887764

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=99.89  E-value=9.5e-23  Score=183.32  Aligned_cols=150  Identities=20%  Similarity=0.263  Sum_probs=121.7

Q ss_pred             eeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHc-CCCC--CCCCCcccccceEEEEEEeCCCCCCC
Q psy7798         102 ECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLD-GLDS--EGKFPCVLGHEGSGIVESVGEGVTSV  178 (261)
Q Consensus       102 ~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~-g~~~--~~~~p~~lG~E~~G~V~~vG~~v~~~  178 (261)
                      .++++++.+++. +++++.+.| ++++||+|||.++|||++|++... |.++  ...+|.++|||++|+|+++  +|++|
T Consensus         4 ~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~~   79 (343)
T PRK09880          4 KTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGL   79 (343)
T ss_pred             cceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCccC
Confidence            467888887766 889998886 689999999999999999999875 4432  2346899999999999999  78999


Q ss_pred             CCCCEEEEeeccCCCCCcccccCcccccccccc----------ccceeeeeeeecccccccCCCCChhhhccccchHHHH
Q psy7798         179 APGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT----------TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTT  248 (261)
Q Consensus       179 ~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA  248 (261)
                      ++||||+..+..+|+.|.+|..+..+.|.....          .|++.++.++.....+++|+++++++++ +...++||
T Consensus        80 ~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~~~~a  158 (343)
T PRK09880         80 KEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEPLAVA  158 (343)
T ss_pred             CCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcHHHHH
Confidence            999999988888999999999999999986321          2444444455557788999999997655 66788999


Q ss_pred             HHHHhccc
Q psy7798         249 HFAVIKRR  256 (261)
Q Consensus       249 ~~aL~~~a  256 (261)
                      |++|...+
T Consensus       159 ~~al~~~~  166 (343)
T PRK09880        159 IHAAHQAG  166 (343)
T ss_pred             HHHHHhcC
Confidence            99996543

>KOG1197|consensus

Probab=99.89  E-value=7.3e-23  Score=171.16  Aligned_cols=140  Identities=25%  Similarity=0.221  Sum_probs=123.2

Q ss_pred             cceeeeEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCC
Q psy7798          99 QVIECKAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVT  176 (261)
Q Consensus        99 ~~~~~~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~  176 (261)
                      .|+..+.+++++.|++  +++++.|.|+|.++|+.||.+|+|||+.|++...|.|...+.|.++|.|++|+|++||++|+
T Consensus         5 ~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gvt   84 (336)
T KOG1197|consen    5 SPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGVT   84 (336)
T ss_pred             CCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCcc
Confidence            4556788889888865  89999999999999999999999999999999999996677899999999999999999999


Q ss_pred             CCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhccc
Q psy7798         177 SVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRR  256 (261)
Q Consensus       177 ~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a  256 (261)
                      ++++||||+-..+                      .|.++.+...+....+++|+.+++.+||++.+.++|||.-|++..
T Consensus        85 drkvGDrVayl~~----------------------~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y  142 (336)
T KOG1197|consen   85 DRKVGDRVAYLNP----------------------FGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAY  142 (336)
T ss_pred             ccccccEEEEecc----------------------chhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999987642                      144555555555888999999999999999999999999999988


Q ss_pred             Cccc
Q psy7798         257 DFEK  260 (261)
Q Consensus       257 ~L~~  260 (261)
                      ++++
T Consensus       143 ~vkp  146 (336)
T KOG1197|consen  143 NVKP  146 (336)
T ss_pred             CCCC
Confidence            8875

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=99.89  E-value=2.9e-22  Score=181.50  Aligned_cols=157  Identities=32%  Similarity=0.552  Sum_probs=137.0

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGD  182 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGD  182 (261)
                      |+++++.++++++++.+++.|.+++++|+|+|.++++|+.|++...|.++ ..+|.++|+|++|+|+++|+++..|++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd   79 (363)
T cd08279           1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD   79 (363)
T ss_pred             CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence            68899998888899999999999999999999999999999999988766 34567899999999999999999999999


Q ss_pred             EEEEeeccCCCCCcccccCccccccccc------------------------cccceeeeee-eecccccccCCCCChhh
Q psy7798         183 HVIPLYIPQCNECKFCKSSKTNLCTKIR------------------------TTQLFLTSNV-TISDFNMGYSMTGSLER  237 (261)
Q Consensus       183 rV~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~g~~~~~~-~~~~~~~~~~~~~s~~e  237 (261)
                      +|++.+..+|++|.+|..+..+.|....                        ...|.+++++ ........+|+++++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~  159 (363)
T cd08279          80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDR  159 (363)
T ss_pred             EEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHH
Confidence            9999988899999999999999997542                        1124444554 44478889999999999


Q ss_pred             hccccchHHHHHHHHhcccCccc
Q psy7798         238 GSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       238 aA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      ++.++++++|||+++++.+++++
T Consensus       160 aa~~~~~~~ta~~~~~~~~~~~~  182 (363)
T cd08279         160 AALLGCGVTTGVGAVVNTARVRP  182 (363)
T ss_pred             eehhcchhHHHHHHHHhccCCCC
Confidence            99999999999999988887754

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=99.89  E-value=3.1e-22  Score=182.93  Aligned_cols=156  Identities=22%  Similarity=0.274  Sum_probs=133.9

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCC-CCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPP-KAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~-~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      |+++++.+++ .+++.+++.|.| ++++|+|++.++++|++|++...|.++...+|.++|+|++|+|+++|++|++|++|
T Consensus         1 m~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   79 (386)
T cd08283           1 MKALVWHGKG-DVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG   79 (386)
T ss_pred             CeeEEEecCC-CceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence            6788887664 489999999988 49999999999999999999999987655567899999999999999999999999


Q ss_pred             CEEEEeeccCCCCCcccccCccccccccccc------------------------cceeeeeeeec-c--cccccCCCCC
Q psy7798         182 DHVIPLYIPQCNECKFCKSSKTNLCTKIRTT------------------------QLFLTSNVTIS-D--FNMGYSMTGS  234 (261)
Q Consensus       182 DrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~g~~~~~~~~~-~--~~~~~~~~~s  234 (261)
                      |+|++.+...|++|.+|..+..+.|......                        .+.+++++.++ .  ...++|++++
T Consensus        80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~  159 (386)
T cd08283          80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLS  159 (386)
T ss_pred             CEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCCCC
Confidence            9999988778999999999999999753211                        24556666665 4  6789999999


Q ss_pred             hhhhccccchHHHHHHHHhcccCccc
Q psy7798         235 LERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       235 ~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      +++|++++..++|||++| ..+++++
T Consensus       160 ~~~aa~l~~~~~ta~~~l-~~~~~~~  184 (386)
T cd08283         160 DEKALFLSDILPTGYHAA-ELAEVKP  184 (386)
T ss_pred             HHHHhhhccchhhhHHHH-hhccCCC
Confidence            999999999999999999 7777754

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=99.88  E-value=4.1e-22  Score=179.60  Aligned_cols=152  Identities=26%  Similarity=0.356  Sum_probs=126.0

Q ss_pred             EEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCC-CCCCCCCcccccceEEEEEEeCCCCCCCCCCCEE
Q psy7798         106 AVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL-DSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHV  184 (261)
Q Consensus       106 ~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~-~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGDrV  184 (261)
                      +++.++++++++++.|.|.|+++||+|||.++|+|++|++...+. .+...+|.++|||++|+|+++|++|+.+ +||||
T Consensus         2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV   80 (349)
T TIGR03201         2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV   80 (349)
T ss_pred             ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence            345667777899999999999999999999999999999987443 3334567899999999999999999887 99999


Q ss_pred             EEeeccCCCCCcccccCcccccccccc-----ccceeeeeeeecccccccCC------CCChhhhccccchHHHHHHHHh
Q psy7798         185 IPLYIPQCNECKFCKSSKTNLCTKIRT-----TQLFLTSNVTISDFNMGYSM------TGSLERGSKRDNSFQTTHFAVI  253 (261)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~------~~s~~eaA~lp~~~~TA~~aL~  253 (261)
                      ++.+..+|+.|..|..+..+.|.....     .|++.++..+......++|+      +++++++++++.++.|||+++.
T Consensus        81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~  160 (349)
T TIGR03201        81 IVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAV  160 (349)
T ss_pred             EECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHH
Confidence            998888999999999999999975432     24455555555577888888      8999999999999999999985


Q ss_pred             cccCcc
Q psy7798         254 KRRDFE  259 (261)
Q Consensus       254 ~~a~L~  259 (261)
                       .++++
T Consensus       161 -~~~~~  165 (349)
T TIGR03201       161 -QAGLK  165 (349)
T ss_pred             -hcCCC
Confidence             45554

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=99.88  E-value=7e-22  Score=179.20  Aligned_cols=156  Identities=47%  Similarity=0.749  Sum_probs=135.0

Q ss_pred             eEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCE
Q psy7798         104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDH  183 (261)
Q Consensus       104 ~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGDr  183 (261)
                      +++++.+.++++++.+.+.|.+++++|+|+|.++++|+.|++...|.++ ...|.++|||++|+|+++|++|+.+++||+
T Consensus         2 ~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~   80 (365)
T cd05279           2 KAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGDK   80 (365)
T ss_pred             ceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCCE
Confidence            5677888777799999999999999999999999999999999988765 345679999999999999999999999999


Q ss_pred             EEEeeccCCCCCcccccCccccccccccc--------------------------cceeeeeeeecccccccCCCCChhh
Q psy7798         184 VIPLYIPQCNECKFCKSSKTNLCTKIRTT--------------------------QLFLTSNVTISDFNMGYSMTGSLER  237 (261)
Q Consensus       184 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~g~~~~~~~~~~~~~~~~~~~s~~e  237 (261)
                      |++.+...|++|.+|..+..+.|......                          +++.++..+..+.+.++|+++++++
T Consensus        81 Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~  160 (365)
T cd05279          81 VIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEK  160 (365)
T ss_pred             EEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHHH
Confidence            99988788999999999999999754321                          3444555555578899999999999


Q ss_pred             hccccchHHHHHHHHhcccCccc
Q psy7798         238 GSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       238 aA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      ++.++++++|||++|.+.+++++
T Consensus       161 a~~~~~~~~ta~~al~~~~~~~~  183 (365)
T cd05279         161 VCLIGCGFSTGYGAAVNTAKVTP  183 (365)
T ss_pred             hhHhccchhHHHHHHHhccCCCC
Confidence            99999999999999988887764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=99.88  E-value=9.5e-22  Score=174.68  Aligned_cols=157  Identities=32%  Similarity=0.507  Sum_probs=134.5

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGD  182 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGD  182 (261)
                      |+++++..+++.+.+.+.+.|.+.+++|+|+|+++++|+.|++...|.++....|.++|+|++|+|+.+|+++++|++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd   80 (332)
T cd08259           1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD   80 (332)
T ss_pred             CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence            57888877666799999999999999999999999999999999998776555678999999999999999999999999


Q ss_pred             EEEEeeccCCCCCcccccCcccccccccc-----ccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccC
Q psy7798         183 HVIPLYIPQCNECKFCKSSKTNLCTKIRT-----TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRD  257 (261)
Q Consensus       183 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~  257 (261)
                      +|+++....|+.|.+|..+..+.|.....     .|++.++..+.......+|++++++++++++.+++|||++|.. ++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~-~~  159 (332)
T cd08259          81 RVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR-AG  159 (332)
T ss_pred             EEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH-hC
Confidence            99998888899999999999999976422     1334445555557788999999999999999999999999976 66


Q ss_pred             ccc
Q psy7798         258 FEK  260 (261)
Q Consensus       258 L~~  260 (261)
                      +++
T Consensus       160 ~~~  162 (332)
T cd08259         160 VKK  162 (332)
T ss_pred             CCC
Confidence            653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=99.88  E-value=5.1e-22  Score=178.02  Aligned_cols=156  Identities=22%  Similarity=0.274  Sum_probs=134.4

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCC-CCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPP-KAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~-~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      |+++++.+++. +.+.+.+.|.| .++||+|||.++|+|+.|++...|.++...+|.++|+|++|+|+++|++|++|++|
T Consensus         1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G   79 (347)
T cd05278           1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG   79 (347)
T ss_pred             CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence            56788877665 88889999999 99999999999999999999999988766668899999999999999999999999


Q ss_pred             CEEEEeeccCCCCCcccccCccccccccc-------cccceeeeeeeecc---cccccCCCCChhhhccccchHHHHHHH
Q psy7798         182 DHVIPLYIPQCNECKFCKSSKTNLCTKIR-------TTQLFLTSNVTISD---FNMGYSMTGSLERGSKRDNSFQTTHFA  251 (261)
Q Consensus       182 DrV~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~g~~~~~~~~~~---~~~~~~~~~s~~eaA~lp~~~~TA~~a  251 (261)
                      |+|++.+...|+.|.+|..+....|....       ...|.+++++.++.   ...++|++++++++++++.+++|||++
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~  159 (347)
T cd05278          80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHG  159 (347)
T ss_pred             CEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheeeh
Confidence            99999888899999999999998887543       12355666666663   678999999999999999999999999


Q ss_pred             HhcccCccc
Q psy7798         252 VIKRRDFEK  260 (261)
Q Consensus       252 L~~~a~L~~  260 (261)
                      + ..+++++
T Consensus       160 ~-~~~~~~~  167 (347)
T cd05278         160 A-ELAGIKP  167 (347)
T ss_pred             h-hhcCCCC
Confidence            8 6677653

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=99.88  E-value=5.2e-22  Score=179.21  Aligned_cols=148  Identities=26%  Similarity=0.346  Sum_probs=121.1

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCc-ccccceEEEEEEeCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC-VLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~-~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      |+++....+++..++++.+.|.++++||+|||.++|||.+|++.+.|..+....+. ++|||++|+|+++| .++.|++|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G   79 (350)
T COG1063           1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG   79 (350)
T ss_pred             CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence            45666666665444666666678999999999999999999999999766555555 99999999999999 77889999


Q ss_pred             CEEEEeeccCCCCCcccccCccccccccc---------cccceeeeeeeec-cccccc-CCCCChhhhccccchHHHHHH
Q psy7798         182 DHVIPLYIPQCNECKFCKSSKTNLCTKIR---------TTQLFLTSNVTIS-DFNMGY-SMTGSLERGSKRDNSFQTTHF  250 (261)
Q Consensus       182 DrV~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~g~~~~~~~~~-~~~~~~-~~~~s~~eaA~lp~~~~TA~~  250 (261)
                      |||++.+..+|+.|.+|..+.++.|....         ..+|++++|+.++ +.+..+ |+++ ..++|++.-.+.|||+
T Consensus        80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~~  158 (350)
T COG1063          80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAYH  158 (350)
T ss_pred             CEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhhh
Confidence            99999999999999999999999999432         1246777887777 566655 6877 7777788899999977


Q ss_pred             HH
Q psy7798         251 AV  252 (261)
Q Consensus       251 aL  252 (261)
                      +.
T Consensus       159 ~~  160 (350)
T COG1063         159 GH  160 (350)
T ss_pred             hh
Confidence            73

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.88  E-value=1.2e-21  Score=175.36  Aligned_cols=156  Identities=26%  Similarity=0.331  Sum_probs=132.3

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGD  182 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGD  182 (261)
                      |+++++.++++.+++++++.|.++++||+|+|.++|+|+.|++...|.++....|.++|||++|+|+++|+++++|++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd   80 (333)
T cd08296           1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD   80 (333)
T ss_pred             CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence            68899988876799999999999999999999999999999999988765445678999999999999999999999999


Q ss_pred             EEEEee-ccCCCCCcccccCccccccccccc----cceeeeeeee-cccccccCCCCChhhhccccchHHHHHHHHhccc
Q psy7798         183 HVIPLY-IPQCNECKFCKSSKTNLCTKIRTT----QLFLTSNVTI-SDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRR  256 (261)
Q Consensus       183 rV~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~~~~-~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a  256 (261)
                      +|++.+ ...|+.|..|..+..+.|......    .+.+++++.+ .....++|+++++++++.++.+++|||+++... 
T Consensus        81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~-  159 (333)
T cd08296          81 RVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRNS-  159 (333)
T ss_pred             EEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHHhc-
Confidence            998754 468999999999999999865422    2444455444 477889999999999999999999999998543 


Q ss_pred             Ccc
Q psy7798         257 DFE  259 (261)
Q Consensus       257 ~L~  259 (261)
                      +++
T Consensus       160 ~~~  162 (333)
T cd08296         160 GAK  162 (333)
T ss_pred             CCC
Confidence            554

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=99.87  E-value=2.2e-21  Score=173.16  Aligned_cols=156  Identities=24%  Similarity=0.331  Sum_probs=134.8

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGD  182 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGD  182 (261)
                      |+++++.++++++++++.+.|.++++||+|++.++|+|+.|++...|.++...+|.++|+|++|+|+++|++++.+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~   80 (334)
T PRK13771          1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD   80 (334)
T ss_pred             CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence            67888888888899999999999999999999999999999999998776556678899999999999999999999999


Q ss_pred             EEEEeeccCCCCCcccccCcccccccccc-----ccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccC
Q psy7798         183 HVIPLYIPQCNECKFCKSSKTNLCTKIRT-----TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRD  257 (261)
Q Consensus       183 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~  257 (261)
                      +|++.....|+.|.+|..+..+.|+....     .|++.++.........++|+++++.+++.++.+++|||+++... +
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~-~  159 (334)
T PRK13771         81 RVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRA-G  159 (334)
T ss_pred             EEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhc-C
Confidence            99998778999999999999999977543     23344444555577889999999999999999999999998654 5


Q ss_pred             cc
Q psy7798         258 FE  259 (261)
Q Consensus       258 L~  259 (261)
                      ++
T Consensus       160 ~~  161 (334)
T PRK13771        160 VK  161 (334)
T ss_pred             CC
Confidence            54

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=99.87  E-value=1.4e-21  Score=175.97  Aligned_cols=155  Identities=30%  Similarity=0.383  Sum_probs=127.5

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCC-C--CC--------CCCCcccccceEEEEEEe
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL-D--SE--------GKFPCVLGHEGSGIVESV  171 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~-~--~~--------~~~p~~lG~E~~G~V~~v  171 (261)
                      |+++++.+++. +++++++.|+|+++||+||+.++|+|+.|++...+. +  +.        ...|.++|+|++|+|+++
T Consensus         1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   79 (351)
T cd08233           1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV   79 (351)
T ss_pred             CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence            67888877664 999999999999999999999999999999876542 1  10        125789999999999999


Q ss_pred             CCCCCCCCCCCEEEEeeccCCCCCcccccCcccccccccc------ccceeeeeeeecccccccCCCCChhhhccccchH
Q psy7798         172 GEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT------TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSF  245 (261)
Q Consensus       172 G~~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~  245 (261)
                      |++|++|++||+|++.....|+.|.+|..+..+.|.....      .|++.++.........++|+++++++++.+ ..+
T Consensus        80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~~~  158 (351)
T cd08233          80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-EPL  158 (351)
T ss_pred             CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-cHH
Confidence            9999999999999998888999999999999999976432      244445555555788999999999999876 678


Q ss_pred             HHHHHHHhcccCccc
Q psy7798         246 QTTHFAVIKRRDFEK  260 (261)
Q Consensus       246 ~TA~~aL~~~a~L~~  260 (261)
                      .|||++| ..+++++
T Consensus       159 ~ta~~~l-~~~~~~~  172 (351)
T cd08233         159 AVAWHAV-RRSGFKP  172 (351)
T ss_pred             HHHHHHH-HhcCCCC
Confidence            9999999 6776653

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=99.87  E-value=2.2e-21  Score=175.89  Aligned_cols=157  Identities=30%  Similarity=0.431  Sum_probs=135.9

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCC---CC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTS---VA  179 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~---~~  179 (261)
                      |+++++..++.++.+.+.+.|.++++||+|+|.++|+|+.|+....|.++. .+|.++|+|++|+|+.+|+++++   |+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~   79 (367)
T cd08263           1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS   79 (367)
T ss_pred             CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence            678899888777899999999999999999999999999999999887764 55789999999999999999988   99


Q ss_pred             CCCEEEEeeccCCCCCcccccCccccccccc--------------------------cccceeeeeeee-cccccccCCC
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIR--------------------------TTQLFLTSNVTI-SDFNMGYSMT  232 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~g~~~~~~~~-~~~~~~~~~~  232 (261)
                      +||+|++.+..+|+.|.+|..+..+.|....                          ...+++++++.+ .....++|++
T Consensus        80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~  159 (367)
T cd08263          80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPES  159 (367)
T ss_pred             CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEECCCC
Confidence            9999999877899999999999999988653                          123455555555 4788999999


Q ss_pred             CChhhhccccchHHHHHHHHhcccCccc
Q psy7798         233 GSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       233 ~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      ++++++|++++.++|||++|.+.+++++
T Consensus       160 is~~~aa~l~~~~~tA~~~l~~~~~~~~  187 (367)
T cd08263         160 LDYTESAVLGCAGFTAYGALKHAADVRP  187 (367)
T ss_pred             CCHHHHhHhcchHHHHHHHHHhcccCCC
Confidence            9999999999999999999988777653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=99.87  E-value=2.7e-21  Score=174.15  Aligned_cols=156  Identities=17%  Similarity=0.153  Sum_probs=132.9

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGD  182 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGD  182 (261)
                      |+++++.+++. +.+.+.+.|.+.++||+|||.++|+|++|++...|.++....|.++|||++|+|+++|+++++|++||
T Consensus         1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd   79 (351)
T cd08285           1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD   79 (351)
T ss_pred             CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence            67888888775 88888888889999999999999999999999888765445678999999999999999999999999


Q ss_pred             EEEEeeccCCCCCcccccCcccccccccc-------ccceeeeeeeecc---cccccCCCCChhhhccccchHHHHHHHH
Q psy7798         183 HVIPLYIPQCNECKFCKSSKTNLCTKIRT-------TQLFLTSNVTISD---FNMGYSMTGSLERGSKRDNSFQTTHFAV  252 (261)
Q Consensus       183 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~---~~~~~~~~~s~~eaA~lp~~~~TA~~aL  252 (261)
                      +|++.+..+|+.|..|..+..+.|.....       ..|.+++++.++.   ...++|+++++++++.++..++|||+++
T Consensus        80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~~  159 (351)
T cd08285          80 RVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHGA  159 (351)
T ss_pred             EEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHHHH
Confidence            99997767899999999999999976310       1345566666653   6889999999999999999999999996


Q ss_pred             hcccCccc
Q psy7798         253 IKRRDFEK  260 (261)
Q Consensus       253 ~~~a~L~~  260 (261)
                       +.+++++
T Consensus       160 -~~~~~~~  166 (351)
T cd08285         160 -ELANIKL  166 (351)
T ss_pred             -HccCCCC
Confidence             6777764

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=99.87  E-value=4e-21  Score=172.43  Aligned_cols=158  Identities=22%  Similarity=0.381  Sum_probs=136.9

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGD  182 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGD  182 (261)
                      ||++++.+++.++++++.+.|.+.+++|+|++.++++|+.|+....|.++...+|.++|+|++|+|+.+|+++++|++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd   80 (345)
T cd08260           1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD   80 (345)
T ss_pred             CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence            68899988887899999999999999999999999999999999998766445578999999999999999999999999


Q ss_pred             EEEEeeccCCCCCcccccCcccccccccc----ccceeeeeeeecc---cccccCCCCChhhhccccchHHHHHHHHhcc
Q psy7798         183 HVIPLYIPQCNECKFCKSSKTNLCTKIRT----TQLFLTSNVTISD---FNMGYSMTGSLERGSKRDNSFQTTHFAVIKR  255 (261)
Q Consensus       183 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~---~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~  255 (261)
                      +|++.....|++|.+|..+..+.|.....    ..+.++.++.++.   ...++|++++++++++++..++|||++|.+.
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~  160 (345)
T cd08260          81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQ  160 (345)
T ss_pred             EEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHHHHc
Confidence            99886667899999999999999987531    1355666666653   7889999999999999999999999999877


Q ss_pred             cCccc
Q psy7798         256 RDFEK  260 (261)
Q Consensus       256 a~L~~  260 (261)
                      +++++
T Consensus       161 ~~~~~  165 (345)
T cd08260         161 ARVKP  165 (345)
T ss_pred             cCCCC
Confidence            77654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=99.87  E-value=2.9e-21  Score=172.83  Aligned_cols=157  Identities=29%  Similarity=0.432  Sum_probs=132.8

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC---CCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE---GKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~---~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      |+++++..+++++.+.+.+.|.+.+++|+|+|.++|+|+.|++...|.++.   ..+|.++|+|++|+|+++|++|.+|+
T Consensus         1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~   80 (340)
T cd05284           1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK   80 (340)
T ss_pred             CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence            578888888777999999999999999999999999999999999887642   34568899999999999999999999


Q ss_pred             CCCEEEEeeccCCCCCcccccCccccccccccc----cceeeee-eeecccccccCCCCChhhhccccchHHHHHHHHhc
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTT----QLFLTSN-VTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIK  254 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~-~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~  254 (261)
                      +||+|+++....|+.|..|..+..+.|......    .|.++++ .+......++|++++++++++++..++|||++|..
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~  160 (340)
T cd05284          81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKK  160 (340)
T ss_pred             CCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHH
Confidence            999999988888999999999999888654322    2444454 44457888999999999999999999999999976


Q ss_pred             c-cCcc
Q psy7798         255 R-RDFE  259 (261)
Q Consensus       255 ~-a~L~  259 (261)
                      . .+++
T Consensus       161 ~~~~~~  166 (340)
T cd05284         161 ALPYLD  166 (340)
T ss_pred             hcccCC
Confidence            5 3443

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=99.86  E-value=4.1e-21  Score=172.90  Aligned_cols=155  Identities=26%  Similarity=0.387  Sum_probs=130.6

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCC---------CCCCCcccccceEEEEEEeCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDS---------EGKFPCVLGHEGSGIVESVGE  173 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~---------~~~~p~~lG~E~~G~V~~vG~  173 (261)
                      ||++++.+++. +++++.+.|+++++||+|++.++|+|+.|++...|...         ....|.++|+|++|+|+++|+
T Consensus         1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~   79 (350)
T cd08256           1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE   79 (350)
T ss_pred             CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence            67888887765 89999999999999999999999999999999888531         013567899999999999999


Q ss_pred             CCC--CCCCCCEEEEeeccCCCCCcccccCcccccccccc------ccceeeeeeeec-c-cccccCCCCChhhhccccc
Q psy7798         174 GVT--SVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT------TQLFLTSNVTIS-D-FNMGYSMTGSLERGSKRDN  243 (261)
Q Consensus       174 ~v~--~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~-~-~~~~~~~~~s~~eaA~lp~  243 (261)
                      +|+  +|++||+|++.+..+|+.|.+|..+..+.|.....      ..|++++++.++ + .+.++|+++++++++.+ .
T Consensus        80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~  158 (350)
T cd08256          80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI-E  158 (350)
T ss_pred             CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhh-h
Confidence            999  99999999998889999999999999999976431      234556666655 4 45799999999999998 8


Q ss_pred             hHHHHHHHHhcccCccc
Q psy7798         244 SFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       244 ~~~TA~~aL~~~a~L~~  260 (261)
                      .++|||+++ +.+++++
T Consensus       159 ~~~ta~~a~-~~~~~~~  174 (350)
T cd08256         159 PLACALHAV-DRANIKF  174 (350)
T ss_pred             HHHHHHHHH-HhcCCCC
Confidence            999999998 7777653

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=99.86  E-value=5.7e-21  Score=171.86  Aligned_cols=157  Identities=31%  Similarity=0.343  Sum_probs=132.6

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCC------------CCCCCcccccceEEEEEE
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDS------------EGKFPCVLGHEGSGIVES  170 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~------------~~~~p~~lG~E~~G~V~~  170 (261)
                      ||++++..++.++++.+.+.|+++++||+|+|.++|+|++|++...|.++            ....|.++|+|++|+|++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~   80 (350)
T cd08240           1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA   80 (350)
T ss_pred             CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence            67888877887799999999999999999999999999999999988654            123457899999999999


Q ss_pred             eCCCCCCCCCCCEEEEeeccCCCCCcccccCcccccccccc----ccceeeeeeee-cccccccCCCCChhhhccccchH
Q psy7798         171 VGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT----TQLFLTSNVTI-SDFNMGYSMTGSLERGSKRDNSF  245 (261)
Q Consensus       171 vG~~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~~-~~~~~~~~~~~s~~eaA~lp~~~  245 (261)
                      +|++++++++||+|++++...|+.|..|..+..+.|.....    ..+.++.++.+ ......+|+++++.+++++++.+
T Consensus        81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~~  160 (350)
T cd08240          81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSG  160 (350)
T ss_pred             eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhhchh
Confidence            99999999999999998888999999999999999966422    22344444444 46778999999999999999999


Q ss_pred             HHHHHHHhcccCcc
Q psy7798         246 QTTHFAVIKRRDFE  259 (261)
Q Consensus       246 ~TA~~aL~~~a~L~  259 (261)
                      +|||+++...+.++
T Consensus       161 ~tA~~~~~~~~~~~  174 (350)
T cd08240         161 LTAYSAVKKLMPLV  174 (350)
T ss_pred             hhHHHHHHhcccCC
Confidence            99999998776653

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=99.86  E-value=6.7e-21  Score=171.37  Aligned_cols=153  Identities=22%  Similarity=0.269  Sum_probs=122.7

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCC-CCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPP-KAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~-~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      ||++++.+++. +++.+.+.|.| +++||+|||.++|+|++|++...+.. ....|.++|||++|+|+++|++|++|++|
T Consensus         1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~vG   78 (347)
T PRK10309          1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLHPG   78 (347)
T ss_pred             CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-CCCCCcccccceEEEEEEeCCCCCCCCCC
Confidence            67888887764 88999999987 69999999999999999997643211 12346899999999999999999999999


Q ss_pred             CEEEEeeccCCCCCcccccCcccccccccc-----ccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhccc
Q psy7798         182 DHVIPLYIPQCNECKFCKSSKTNLCTKIRT-----TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRR  256 (261)
Q Consensus       182 DrV~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a  256 (261)
                      |||++.+...|+.|.+|..+..+.|.....     .|++.++..+......++|+++++++||.+. .+.++|+++ +.+
T Consensus        79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~-~~~  156 (347)
T PRK10309         79 DAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAF-HLA  156 (347)
T ss_pred             CEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHHH-Hhc
Confidence            999998888999999999999999976432     2445555555557788999999999999874 456688875 455


Q ss_pred             Ccc
Q psy7798         257 DFE  259 (261)
Q Consensus       257 ~L~  259 (261)
                      +++
T Consensus       157 ~~~  159 (347)
T PRK10309        157 QGC  159 (347)
T ss_pred             CCC
Confidence            544

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=99.86  E-value=9.8e-21  Score=168.34  Aligned_cols=156  Identities=22%  Similarity=0.244  Sum_probs=129.9

Q ss_pred             eeEEEEecCC-CCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCC
Q psy7798         103 CKAAVAWEPK-KPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       103 ~~~~~~~~~g-~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      |+++++.+++ ..+++.+.+.|+++++||+|++.++|+|++|++...+. +...+|.++|||++|+|+++|++|++|++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G   79 (325)
T cd08264           1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVKPMPHIPGAEFAGVVEEVGDHVKGVKKG   79 (325)
T ss_pred             CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCCCCCeecccceeEEEEEECCCCCCCCCC
Confidence            5677776666 45888888888899999999999999999999988752 222346789999999999999999999999


Q ss_pred             CEEEEeeccCCCCCcccccCccccccccc-----cccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhccc
Q psy7798         182 DHVIPLYIPQCNECKFCKSSKTNLCTKIR-----TTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRR  256 (261)
Q Consensus       182 DrV~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a  256 (261)
                      |+|++.....|+.|.+|..+..+.|....     ..+++.++.........++|+++++++++.++.+++|||+++.. +
T Consensus        80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~-~  158 (325)
T cd08264          80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKT-A  158 (325)
T ss_pred             CEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh-c
Confidence            99999887799999999999999997531     12455556666667889999999999999999999999999854 7


Q ss_pred             Cccc
Q psy7798         257 DFEK  260 (261)
Q Consensus       257 ~L~~  260 (261)
                      ++++
T Consensus       159 ~~~~  162 (325)
T cd08264         159 GLGP  162 (325)
T ss_pred             CCCC
Confidence            6653

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=99.86  E-value=4.1e-21  Score=172.71  Aligned_cols=145  Identities=19%  Similarity=0.132  Sum_probs=111.2

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC----CCCCcccccceEEEEEEeCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE----GKFPCVLGHEGSGIVESVGEGVTSV  178 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~----~~~p~~lG~E~~G~V~~vG~~v~~~  178 (261)
                      .+++++.++++ +++++.+.|+ +++||+|||+++|||++|++.+.|.++.    ..+|.++|||++|+|+++|.+  +|
T Consensus         3 ~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~   78 (341)
T cd08237           3 NQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TY   78 (341)
T ss_pred             ccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--cc
Confidence            46777877775 8899999885 9999999999999999999999987532    346899999999999998864  79


Q ss_pred             CCCCEEEEeeccCCCCCcccccCcccccccccc----ccceeeee-eeecccccccCCCCChhhhccccchHHHHHHHHh
Q psy7798         179 APGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT----TQLFLTSN-VTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVI  253 (261)
Q Consensus       179 ~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~-~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~  253 (261)
                      ++||||+..+...|+.| .|  +..+.|.....    .+|++++| +++...++++|+++++++|| ++..++|||+++.
T Consensus        79 ~vGdrV~~~~~~~~~~~-~~--~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa-~~~~~~~a~~a~~  154 (341)
T cd08237          79 KVGTKVVMVPNTPVEKD-EI--IPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAA-FTELVSVGVHAIS  154 (341)
T ss_pred             CCCCEEEECCCCCchhc-cc--chhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhh-hhchHHHHHHHHH
Confidence            99999998765556633 34  34456654321    12444555 45557889999999998876 5568999999986


Q ss_pred             cc
Q psy7798         254 KR  255 (261)
Q Consensus       254 ~~  255 (261)
                      ..
T Consensus       155 ~~  156 (341)
T cd08237         155 RF  156 (341)
T ss_pred             HH
Confidence            43

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=99.86  E-value=9.2e-21  Score=169.79  Aligned_cols=154  Identities=23%  Similarity=0.309  Sum_probs=129.8

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCC-CCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPK-AGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~-~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      |+++++..++ .+++++.+.|.|. ++||+|+|.++|+|+.|++...|.++ ...|.++|+|++|+|+++|++|+++++|
T Consensus         1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G   78 (344)
T cd08284           1 MKAVVFKGPG-DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG   78 (344)
T ss_pred             CeeEEEecCC-CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence            5677776654 5899999999885 99999999999999999999988765 3346789999999999999999999999


Q ss_pred             CEEEEeeccCCCCCcccccCccccccccccc--------cceeeeeeeec---ccccccCCCCChhhhccccchHHHHHH
Q psy7798         182 DHVIPLYIPQCNECKFCKSSKTNLCTKIRTT--------QLFLTSNVTIS---DFNMGYSMTGSLERGSKRDNSFQTTHF  250 (261)
Q Consensus       182 DrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~g~~~~~~~~~---~~~~~~~~~~s~~eaA~lp~~~~TA~~  250 (261)
                      |+|++.+...|+.|.+|..+....|......        .+.++.+..++   ....++|++++++++++++.+++|||+
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~~  158 (344)
T cd08284          79 DRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYF  158 (344)
T ss_pred             CEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHHh
Confidence            9999988788999999999999988654332        24556666655   388899999999999999999999999


Q ss_pred             HHhcccCcc
Q psy7798         251 AVIKRRDFE  259 (261)
Q Consensus       251 aL~~~a~L~  259 (261)
                      ++.. ++++
T Consensus       159 ~~~~-~~~~  166 (344)
T cd08284         159 GAKR-AQVR  166 (344)
T ss_pred             hhHh-cCCc
Confidence            9954 6654

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=99.86  E-value=1.1e-20  Score=168.84  Aligned_cols=156  Identities=28%  Similarity=0.420  Sum_probs=128.8

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGD  182 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGD  182 (261)
                      ||++++.+++....+++.+.|+|+++||+|+|.++++|++|++...|.++. ..|.++|+|++|+|+++|+++++|++||
T Consensus         1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd   79 (338)
T PRK09422          1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD   79 (338)
T ss_pred             CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence            678888887765448899999999999999999999999999999887653 2357899999999999999999999999


Q ss_pred             EEEEee-ccCCCCCcccccCccccccccccc----cceeeeeeee-cccccccCCCCChhhhccccchHHHHHHHHhccc
Q psy7798         183 HVIPLY-IPQCNECKFCKSSKTNLCTKIRTT----QLFLTSNVTI-SDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRR  256 (261)
Q Consensus       183 rV~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~~~~-~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a  256 (261)
                      +|++.+ ...|+.|.+|..+..+.|......    .|.+++++.+ .....++|++++++++++++..++|||+++ +.+
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~-~~~  158 (338)
T PRK09422         80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-KVS  158 (338)
T ss_pred             EEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-Hhc
Confidence            998754 367999999988888888654321    2444455444 467789999999999999999999999998 677


Q ss_pred             Cccc
Q psy7798         257 DFEK  260 (261)
Q Consensus       257 ~L~~  260 (261)
                      ++++
T Consensus       159 ~~~~  162 (338)
T PRK09422        159 GIKP  162 (338)
T ss_pred             CCCC
Confidence            7653

>PRK10083 putative oxidoreductase; Provisional

Probab=99.86  E-value=1e-20  Score=169.35  Aligned_cols=155  Identities=27%  Similarity=0.407  Sum_probs=128.5

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGD  182 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGD  182 (261)
                      |+++++.+++ .+++.+.+.|.|+++||+||+.++|+|++|++...|.++...+|.++|||++|+|+++|++|+.|++||
T Consensus         1 m~a~~~~~~~-~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   79 (339)
T PRK10083          1 MKSIVIEKPN-SLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE   79 (339)
T ss_pred             CeEEEEecCC-eeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence            5778888766 488999999999999999999999999999999988776545688999999999999999999999999


Q ss_pred             EEEEeeccCCCCCcccccCcccccccccc-----ccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccC
Q psy7798         183 HVIPLYIPQCNECKFCKSSKTNLCTKIRT-----TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRD  257 (261)
Q Consensus       183 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~  257 (261)
                      +|+..+...|+.|.+|..+..+.|.....     .|++.++.........++|+++++++++ +...+.|||+ +.+.++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~-~~~~~~  157 (339)
T PRK10083         80 RVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAAN-VTGRTG  157 (339)
T ss_pred             EEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHH-HHHhcC
Confidence            99988878899999999999999975421     1344444555557788999999998876 6678888885 556676


Q ss_pred             ccc
Q psy7798         258 FEK  260 (261)
Q Consensus       258 L~~  260 (261)
                      +++
T Consensus       158 ~~~  160 (339)
T PRK10083        158 PTE  160 (339)
T ss_pred             CCC
Confidence            654

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=99.85  E-value=1.3e-20  Score=169.05  Aligned_cols=157  Identities=25%  Similarity=0.294  Sum_probs=132.5

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCC-CCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPP-KAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~-~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      |+++++.+++. +++.+.+.|+| .++||+|+|.++++|+.|+....|.++...+|.++|+|++|+|+++|++++++++|
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G   79 (345)
T cd08286           1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG   79 (345)
T ss_pred             CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence            57788877765 88999998886 89999999999999999999999987654557899999999999999999999999


Q ss_pred             CEEEEeeccCCCCCcccccCcccccccccc-----ccceeeeeeeecc---cccccCCCCChhhhccccchHHHHHHHHh
Q psy7798         182 DHVIPLYIPQCNECKFCKSSKTNLCTKIRT-----TQLFLTSNVTISD---FNMGYSMTGSLERGSKRDNSFQTTHFAVI  253 (261)
Q Consensus       182 DrV~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~---~~~~~~~~~s~~eaA~lp~~~~TA~~aL~  253 (261)
                      |+|++.+...|+.|.+|..+....|.....     .+|.+++++.++.   ...++|+++++++++.++..++|||+++.
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~  159 (345)
T cd08286          80 DRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGV  159 (345)
T ss_pred             CEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHHHH
Confidence            999998877899999999888877765311     1356666666663   68899999999999999999999999887


Q ss_pred             cccCccc
Q psy7798         254 KRRDFEK  260 (261)
Q Consensus       254 ~~a~L~~  260 (261)
                      +.+++++
T Consensus       160 ~~~~~~~  166 (345)
T cd08286         160 LNGKVKP  166 (345)
T ss_pred             hhcCCCC
Confidence            7777654

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.85  E-value=1.7e-20  Score=168.12  Aligned_cols=151  Identities=26%  Similarity=0.294  Sum_probs=127.6

Q ss_pred             EEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCEE
Q psy7798         105 AAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHV  184 (261)
Q Consensus       105 ~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGDrV  184 (261)
                      ++.....+..+++.+.+.|.|+++||+|||.++|+|+.|++...|.++...+|.++|||++|+|+++|+++++|++||+|
T Consensus         2 ~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V   81 (337)
T cd05283           2 GYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDRV   81 (337)
T ss_pred             ceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCEE
Confidence            45666777779999999999999999999999999999999999877555567899999999999999999999999999


Q ss_pred             E-EeeccCCCCCcccccCccccccccc------------cccceeeeeeeecccccccCCCCChhhhccccchHHHHHHH
Q psy7798         185 I-PLYIPQCNECKFCKSSKTNLCTKIR------------TTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFA  251 (261)
Q Consensus       185 ~-~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~a  251 (261)
                      + +.....|++|.+|..+..+.|+...            ..|++.++.........++|+++++++++.+++.+.|||++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~  161 (337)
T cd05283          82 GVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSP  161 (337)
T ss_pred             EEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHH
Confidence            7 5455689999999999999997542            12344444444457788999999999999999999999999


Q ss_pred             Hhcc
Q psy7798         252 VIKR  255 (261)
Q Consensus       252 L~~~  255 (261)
                      +...
T Consensus       162 ~~~~  165 (337)
T cd05283         162 LKRN  165 (337)
T ss_pred             HHhc
Confidence            8554

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=99.85  E-value=2e-20  Score=170.21  Aligned_cols=155  Identities=23%  Similarity=0.312  Sum_probs=130.7

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCC-CCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPP-KAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~-~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      |+++++.+++ ++++++++.|.+ +++||+|||.++|+|+.|++...|.++ ...|.++|||++|+|+++|++++.|++|
T Consensus         1 m~~~~~~~~~-~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G   78 (375)
T cd08282           1 MKAVVYGGPG-NVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG   78 (375)
T ss_pred             CceEEEecCC-ceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence            4677777765 589999999986 899999999999999999999998776 3457899999999999999999999999


Q ss_pred             CEEEEeeccCCCCCcccccCcccccccccc--------------ccceeeeeeeecc---cccccCCCCChh---hhccc
Q psy7798         182 DHVIPLYIPQCNECKFCKSSKTNLCTKIRT--------------TQLFLTSNVTISD---FNMGYSMTGSLE---RGSKR  241 (261)
Q Consensus       182 DrV~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~g~~~~~~~~~~---~~~~~~~~~s~~---eaA~l  241 (261)
                      |+|++.+...|+.|..|..+..+.|.....              ..|.+++++.++.   .+.++|++++++   +++.+
T Consensus        79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~  158 (375)
T cd08282          79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLML  158 (375)
T ss_pred             CEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhheeee
Confidence            999988888899999999999988865321              1255666666663   788999999999   57889


Q ss_pred             cchHHHHHHHHhcccCccc
Q psy7798         242 DNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       242 p~~~~TA~~aL~~~a~L~~  260 (261)
                      +..++|||+++ ..+++++
T Consensus       159 ~~~~~ta~~a~-~~~~~~~  176 (375)
T cd08282         159 SDIFPTGWHGL-ELAGVQP  176 (375)
T ss_pred             cchHHHHHHHH-HhcCCCC
Confidence            99999999998 7777654

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=99.85  E-value=2.3e-20  Score=165.86  Aligned_cols=157  Identities=24%  Similarity=0.410  Sum_probs=131.2

Q ss_pred             eeEEEEecCCC--CcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         103 CKAAVAWEPKK--PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       103 ~~~~~~~~~g~--~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      |+++++...+.  .+.+.+.+.|.+.+++|+|++.++|+|+.|++...|.++. ...|.++|||++|+|+.+|+++++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (342)
T cd08266           1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK   80 (342)
T ss_pred             CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence            56777764442  3778888888889999999999999999999999886542 23467899999999999999999999


Q ss_pred             CCCEEEEeeccCCCCCcccccCcccccccccc-----ccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhc
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT-----TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIK  254 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~  254 (261)
                      +||+|++.+...|+.|.+|..+..+.|.....     .+++.++..+......++|+++++++++.++.+++|||++|.+
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~  160 (342)
T cd08266          81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVT  160 (342)
T ss_pred             CCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHH
Confidence            99999999888999999999999999987532     2344455555557788999999999999999999999999987


Q ss_pred             ccCcc
Q psy7798         255 RRDFE  259 (261)
Q Consensus       255 ~a~L~  259 (261)
                      .++++
T Consensus       161 ~~~~~  165 (342)
T cd08266         161 RARLR  165 (342)
T ss_pred             hcCCC
Confidence            77664

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.85  E-value=6.4e-21  Score=143.98  Aligned_cols=84  Identities=40%  Similarity=0.742  Sum_probs=74.1

Q ss_pred             CCeEEEEEEEEEcChhhHHHHcCC-CCCCCCCcccccceEEEEEEeCCCCCCCCCCCEEEEeeccCCCCCcccccCcccc
Q psy7798         127 AGEVRIKIVSTAICHTDAYTLDGL-DSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNL  205 (261)
Q Consensus       127 ~~eVlVkV~a~gln~~Dv~~~~g~-~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~  205 (261)
                      |+||+|||+++|||++|++.+.|. .+....|.++|||++|+|+++|++|++|++||||++.+...|+.|..|..+..+.
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~   80 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL   80 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence            689999999999999999999994 4446788999999999999999999999999999998877899999999999999


Q ss_pred             ccccc
Q psy7798         206 CTKIR  210 (261)
Q Consensus       206 ~~~~~  210 (261)
                      |....
T Consensus        81 c~~~~   85 (109)
T PF08240_consen   81 CPNPE   85 (109)
T ss_dssp             TTTBE
T ss_pred             CCCCC
Confidence            97653

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.84  E-value=3.8e-20  Score=164.83  Aligned_cols=157  Identities=31%  Similarity=0.426  Sum_probs=131.7

Q ss_pred             eeEEEEecCCC----CcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCC
Q psy7798         103 CKAAVAWEPKK----PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSV  178 (261)
Q Consensus       103 ~~~~~~~~~g~----~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~  178 (261)
                      |+++++.++++    ++++.+.+.|.++++||+||+.++|+|+.|++...|.++....|.++|+|++|+|+++|+++.+|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF   80 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence            56777877773    58888888888999999999999999999999999987655567899999999999999999999


Q ss_pred             CCCCEEEEee-ccCCCCCcccccCccccccccccc-----cceeeeeeeecccccccCCCCChhhhccccchHHHHHHHH
Q psy7798         179 APGDHVIPLY-IPQCNECKFCKSSKTNLCTKIRTT-----QLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAV  252 (261)
Q Consensus       179 ~vGDrV~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL  252 (261)
                      ++||+|++.+ ..+|+.|.+|..+..+.|+.....     |++.++.........++|+++++.++++++..++|||+++
T Consensus        81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~  160 (329)
T cd08298          81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL  160 (329)
T ss_pred             cCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH
Confidence            9999998754 357889999999999999765321     3344444444577889999999999999999999999999


Q ss_pred             hcccCccc
Q psy7798         253 IKRRDFEK  260 (261)
Q Consensus       253 ~~~a~L~~  260 (261)
                       +.+++++
T Consensus       161 -~~~~~~~  167 (329)
T cd08298         161 -KLAGLKP  167 (329)
T ss_pred             -HhhCCCC
Confidence             8888764

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=99.84  E-value=3.4e-20  Score=169.59  Aligned_cols=162  Identities=17%  Similarity=0.069  Sum_probs=129.7

Q ss_pred             cceeeeEEEEe--cCCC---CcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCC----------CCCCCcccccc
Q psy7798          99 QVIECKAAVAW--EPKK---PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDS----------EGKFPCVLGHE  163 (261)
Q Consensus        99 ~~~~~~~~~~~--~~g~---~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~----------~~~~p~~lG~E  163 (261)
                      .|.+|+++++.  ..+.   .+++.+.+.|.++++||+|+|.++|+|++|++...|...          ....+.++|||
T Consensus         9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e   88 (393)
T cd08246           9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD   88 (393)
T ss_pred             CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence            34568888774  2332   378889999999999999999999999999998877511          01122588999


Q ss_pred             eEEEEEEeCCCCCCCCCCCEEEEeeccCCCCCcccccCccccccccccc------cceeeeeeeecccccccCCCCChhh
Q psy7798         164 GSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTT------QLFLTSNVTISDFNMGYSMTGSLER  237 (261)
Q Consensus       164 ~~G~V~~vG~~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~s~~e  237 (261)
                      ++|+|+++|++|+.|++||+|++++...|+.|..|..+..+.|......      |++.++..+......++|+++++++
T Consensus        89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~  168 (393)
T cd08246          89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEE  168 (393)
T ss_pred             eEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHH
Confidence            9999999999999999999999988788999999999999999743222      4444555555578889999999999


Q ss_pred             hccccchHHHHHHHHhcc--cCccc
Q psy7798         238 GSKRDNSFQTTHFAVIKR--RDFEK  260 (261)
Q Consensus       238 aA~lp~~~~TA~~aL~~~--a~L~~  260 (261)
                      ++.++.+++|||++|...  +++++
T Consensus       169 aa~l~~~~~tA~~al~~~~~~~~~~  193 (393)
T cd08246         169 AAAYMLVGATAYRMLFGWNPNTVKP  193 (393)
T ss_pred             HhhhcccHHHHHHHHhhcccccCCC
Confidence            999999999999999755  56553

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=99.83  E-value=8.1e-20  Score=162.82  Aligned_cols=158  Identities=28%  Similarity=0.401  Sum_probs=132.0

Q ss_pred             eeEEEEecCCCC-cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCC-CCCCCcccccceEEEEEEeCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKP-LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDS-EGKFPCVLGHEGSGIVESVGEGVTSVAP  180 (261)
Q Consensus       103 ~~~~~~~~~g~~-l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~-~~~~p~~lG~E~~G~V~~vG~~v~~~~v  180 (261)
                      |+++.+..++++ +.+.+.+.|.+++++|+|+|.++++|+.|+....|.++ ....|.++|+|++|+|+.+|+++++|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~   80 (338)
T cd08254           1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV   80 (338)
T ss_pred             CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence            678888888877 67778888889999999999999999999999998775 2344678999999999999999999999


Q ss_pred             CCEEEEeeccCCCCCcccccCccccccccc----cccceeeee-eeecccccccCCCCChhhhccccchHHHHHHHHhcc
Q psy7798         181 GDHVIPLYIPQCNECKFCKSSKTNLCTKIR----TTQLFLTSN-VTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKR  255 (261)
Q Consensus       181 GDrV~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~-~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~  255 (261)
                      ||+|++.+..+|+.|..|..+....|....    ..++.++.+ ........++|++++++++++++..++|||++|.+.
T Consensus        81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~  160 (338)
T cd08254          81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRA  160 (338)
T ss_pred             CCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhc
Confidence            999999888899999999999888874221    112444444 444477889999999999999999999999999887


Q ss_pred             cCccc
Q psy7798         256 RDFEK  260 (261)
Q Consensus       256 a~L~~  260 (261)
                      +++++
T Consensus       161 ~~~~~  165 (338)
T cd08254         161 GEVKP  165 (338)
T ss_pred             cCCCC
Confidence            77653

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=99.83  E-value=7.9e-20  Score=167.63  Aligned_cols=160  Identities=17%  Similarity=0.142  Sum_probs=129.4

Q ss_pred             ceeeeEEEEec--CCC---CcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCC----------CCCCC-cccccc
Q psy7798         100 VIECKAAVAWE--PKK---PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDS----------EGKFP-CVLGHE  163 (261)
Q Consensus       100 ~~~~~~~~~~~--~g~---~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~----------~~~~p-~~lG~E  163 (261)
                      +.+|+++++..  .++   .+++.+.+.|.|+++||+|++.++|+|+.|++...|...          ....| .++|||
T Consensus         5 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e   84 (398)
T TIGR01751         5 PETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSD   84 (398)
T ss_pred             chhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccc
Confidence            45689998854  453   388999999999999999999999999999988766421          00123 379999


Q ss_pred             eEEEEEEeCCCCCCCCCCCEEEEeeccCCCCCcccccCccccccccccc-----cceeeee-eeecccccccCCCCChhh
Q psy7798         164 GSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTT-----QLFLTSN-VTISDFNMGYSMTGSLER  237 (261)
Q Consensus       164 ~~G~V~~vG~~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~-~~~~~~~~~~~~~~s~~e  237 (261)
                      ++|+|+++|++++.|++||+|++.+...|++|.+|..+....|......     .|.++++ .+......++|+++++++
T Consensus        85 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~  164 (398)
T TIGR01751        85 ASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEE  164 (398)
T ss_pred             eEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHHH
Confidence            9999999999999999999999998889999999999999988654322     2444444 444477889999999999


Q ss_pred             hccccchHHHHHHHHhc--ccCcc
Q psy7798         238 GSKRDNSFQTTHFAVIK--RRDFE  259 (261)
Q Consensus       238 aA~lp~~~~TA~~aL~~--~a~L~  259 (261)
                      ++.++.+++|||++|..  .++++
T Consensus       165 aa~~~~~~~ta~~al~~~~~~~~~  188 (398)
T TIGR01751       165 AACPGLTGATAYRQLVGWNPATVK  188 (398)
T ss_pred             HhhccchHHHHHHHHhhhhccCCC
Confidence            99999999999999865  45554

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=99.83  E-value=1.5e-19  Score=161.69  Aligned_cols=154  Identities=29%  Similarity=0.436  Sum_probs=127.1

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGD  182 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGD  182 (261)
                      |+++.+..++ .+++.+.+.|.++++||+|+|.++++|+.|+....|.++...+|.++|+|++|+|+++|++++.|++||
T Consensus         1 ~~a~~~~~~~-~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd   79 (337)
T cd08261           1 MKALVCEKPG-RLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD   79 (337)
T ss_pred             CeEEEEeCCC-ceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence            5677777665 488899999999999999999999999999999988776545578899999999999999999999999


Q ss_pred             EEEEeeccCCCCCcccccCcccccccc-----ccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccC
Q psy7798         183 HVIPLYIPQCNECKFCKSSKTNLCTKI-----RTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRD  257 (261)
Q Consensus       183 rV~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~  257 (261)
                      +|++.+..+|+.|..|..+..+.|...     ...|.+.++..+... ..++|+++++++++++ ..++||+++| +.++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~  156 (337)
T cd08261          80 RVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAG  156 (337)
T ss_pred             EEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcC
Confidence            999887778999999999999888432     112344444444446 8899999999999987 6789999988 7777


Q ss_pred             ccc
Q psy7798         258 FEK  260 (261)
Q Consensus       258 L~~  260 (261)
                      +++
T Consensus       157 l~~  159 (337)
T cd08261         157 VTA  159 (337)
T ss_pred             CCC
Confidence            754

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=99.83  E-value=7.3e-20  Score=163.37  Aligned_cols=137  Identities=17%  Similarity=0.148  Sum_probs=112.1

Q ss_pred             EEEEecC---CC--CcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         105 AAVAWEP---KK--PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       105 ~~~~~~~---g~--~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      ++++..+   ++  .++..+.|.|+|+++||+|||+++++|+.|++...|..+...+|.++|+|++|+|+++|++|+.|+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~   81 (336)
T TIGR02817         2 AVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLFK   81 (336)
T ss_pred             ceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCCC
Confidence            4556554   43  377888899999999999999999999999999888765455678999999999999999999999


Q ss_pred             CCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCcc
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFE  259 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~  259 (261)
                      +||+|+++..                   ....|++.++..+....+.++|++++++++|++|++++|||++|...++++
T Consensus        82 ~Gd~V~~~~~-------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~  142 (336)
T TIGR02817        82 PGDEVWYAGD-------------------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGIN  142 (336)
T ss_pred             CCCEEEEcCC-------------------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCC
Confidence            9999987531                   001144555555555788899999999999999999999999998888876


Q ss_pred             c
Q psy7798         260 K  260 (261)
Q Consensus       260 ~  260 (261)
                      +
T Consensus       143 ~  143 (336)
T TIGR02817       143 D  143 (336)
T ss_pred             C
Confidence            3

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=99.83  E-value=1.8e-19  Score=159.55  Aligned_cols=157  Identities=27%  Similarity=0.388  Sum_probs=129.4

Q ss_pred             eeEEEEecCC-CCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCC
Q psy7798         103 CKAAVAWEPK-KPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       103 ~~~~~~~~~g-~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      |++++..+.+ ..+++++++.|.++++||+|+|.++++|+.|++...|.+.....|.++|+|++|+|+++|++++.|++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   80 (306)
T cd08258           1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG   80 (306)
T ss_pred             CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence            4677776655 358999999999999999999999999999999998876433456789999999999999999999999


Q ss_pred             CEEEEeec-cCCCCCcccccCcccccccccc-----ccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcc
Q psy7798         182 DHVIPLYI-PQCNECKFCKSSKTNLCTKIRT-----TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKR  255 (261)
Q Consensus       182 DrV~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~  255 (261)
                      |+|+++.. ..|+.|.+|..+....|+....     .+++.++..+....++++|+++++++++ ++..++|||++|...
T Consensus        81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~~  159 (306)
T cd08258          81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAER  159 (306)
T ss_pred             CEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHHh
Confidence            99998764 6789999999998888875421     1344444455557889999999999887 889999999999888


Q ss_pred             cCccc
Q psy7798         256 RDFEK  260 (261)
Q Consensus       256 a~L~~  260 (261)
                      +++++
T Consensus       160 ~~~~~  164 (306)
T cd08258         160 SGIRP  164 (306)
T ss_pred             cCCCC
Confidence            87753

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=99.82  E-value=8.3e-20  Score=168.21  Aligned_cols=133  Identities=19%  Similarity=0.226  Sum_probs=104.7

Q ss_pred             eeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHH-cCCCCC------CCCCcccccceEEEEEEeCC
Q psy7798         101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTL-DGLDSE------GKFPCVLGHEGSGIVESVGE  173 (261)
Q Consensus       101 ~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~-~g~~~~------~~~p~~lG~E~~G~V~~vG~  173 (261)
                      |.|+++++.+++. +++.++|.|.|+++||+|||.++|||++|++.. .|....      ..+|.++|||++|+|+++|+
T Consensus         1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~   79 (410)
T cd08238           1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK   79 (410)
T ss_pred             CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence            4688898888875 999999999999999999999999999999976 454211      13678999999999999999


Q ss_pred             CCC-CCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecc-----cccccCCCCChhhhccc
Q psy7798         174 GVT-SVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISD-----FNMGYSMTGSLERGSKR  241 (261)
Q Consensus       174 ~v~-~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~~s~~eaA~l  241 (261)
                      +|+ +|++||||++.+...|+.|..|..    .+  .. ..|.+++++.++.     .+.++|+++++++|+.+
T Consensus        80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~~----~g--~~-~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~  146 (410)
T cd08238          80 KWQGKYKPGQRFVIQPALILPDGPSCPG----YS--YT-YPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLV  146 (410)
T ss_pred             CccCCCCCCCEEEEcCCcCCCCCCCCCC----cc--cc-CCCcceEEEEecHHhccCCeEECCCCCCHHHHhhc
Confidence            998 699999999887667888877631    11  11 1345556655554     36899999999999865

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=99.82  E-value=2.1e-19  Score=160.15  Aligned_cols=155  Identities=30%  Similarity=0.391  Sum_probs=129.5

Q ss_pred             eEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCE
Q psy7798         104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDH  183 (261)
Q Consensus       104 ~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGDr  183 (261)
                      |++++.+.|+.+++.+.+.|.+.+++|+|++.++++|+.|++...|.++...+|.++|+|++|+|+++|+++++|++||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~   80 (330)
T cd08245           1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR   80 (330)
T ss_pred             CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence            46777888777999999999999999999999999999999999887654456788999999999999999999999999


Q ss_pred             EEEeec-cCCCCCcccccCcccccccc---cc--ccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccC
Q psy7798         184 VIPLYI-PQCNECKFCKSSKTNLCTKI---RT--TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRD  257 (261)
Q Consensus       184 V~~~~~-~~~~~~~~~~~~~~~~~~~~---~~--~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~  257 (261)
                      |+..+. ..|+.|.+|..+..+.|++.   ..  .+++.++..+......++|++++++++++++..++|||++|.. ++
T Consensus        81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~~  159 (330)
T cd08245          81 VGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AG  159 (330)
T ss_pred             EEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-hC
Confidence            986543 57999999999999988864   11  2334444455557788999999999999999999999999854 55


Q ss_pred             cc
Q psy7798         258 FE  259 (261)
Q Consensus       258 L~  259 (261)
                      ++
T Consensus       160 ~~  161 (330)
T cd08245         160 PR  161 (330)
T ss_pred             CC
Confidence            54

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=99.81  E-value=3.6e-19  Score=159.52  Aligned_cols=154  Identities=29%  Similarity=0.376  Sum_probs=127.9

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGD  182 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGD  182 (261)
                      |+++++.+.+. +.+.+.+.|+++++||+|++.++++|+.|++...|.++ ...|.++|+|++|+|+.+|+++++|++||
T Consensus         1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd   78 (343)
T cd08236           1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAVGD   78 (343)
T ss_pred             CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence            57888887754 88889999999999999999999999999999888653 23467899999999999999999999999


Q ss_pred             EEEEeeccCCCCCcccccCccccccccc-----cccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccC
Q psy7798         183 HVIPLYIPQCNECKFCKSSKTNLCTKIR-----TTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRD  257 (261)
Q Consensus       183 rV~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~  257 (261)
                      +|++++...|+.|.+|..+....|....     ..+.+.++..+......++|++++++++|++ ..++|||++|. .++
T Consensus        79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~-~~~  156 (343)
T cd08236          79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR-LAG  156 (343)
T ss_pred             EEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH-hcC
Confidence            9999887788999999999888886653     2234444455555778899999999999988 57899999995 666


Q ss_pred             ccc
Q psy7798         258 FEK  260 (261)
Q Consensus       258 L~~  260 (261)
                      +++
T Consensus       157 ~~~  159 (343)
T cd08236         157 ITL  159 (343)
T ss_pred             CCC
Confidence            653

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=99.81  E-value=4.4e-19  Score=158.83  Aligned_cols=155  Identities=28%  Similarity=0.420  Sum_probs=127.9

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGD  182 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGD  182 (261)
                      |+++++.+++ .+.+.+.+.|++.+++|+|+|.++++|+.|+....|.++....|.++|+|++|+|+++|++|+.|++||
T Consensus         1 ~~~~~~~~~~-~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd   79 (343)
T cd08235           1 MKAAVLHGPN-DVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD   79 (343)
T ss_pred             CeEEEEecCC-ceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence            5778887776 488999999999999999999999999999999988764333467899999999999999999999999


Q ss_pred             EEEEeeccCCCCCcccccCcccccccccc----ccceeeeeeeec-cc-----ccccCCCCChhhhccccchHHHHHHHH
Q psy7798         183 HVIPLYIPQCNECKFCKSSKTNLCTKIRT----TQLFLTSNVTIS-DF-----NMGYSMTGSLERGSKRDNSFQTTHFAV  252 (261)
Q Consensus       183 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~-~~-----~~~~~~~~s~~eaA~lp~~~~TA~~aL  252 (261)
                      +|++++...|+.|.+|..+....|.....    ..+.++.++.++ ..     ..++|+++++++|+.+ ..+.|||++|
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l  158 (343)
T cd08235          80 RVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCINAQ  158 (343)
T ss_pred             EEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHHHHH
Confidence            99998888899999999888888876532    234555555555 55     8899999999999876 8899999999


Q ss_pred             hcccCccc
Q psy7798         253 IKRRDFEK  260 (261)
Q Consensus       253 ~~~a~L~~  260 (261)
                      .. .++++
T Consensus       159 ~~-~~~~~  165 (343)
T cd08235         159 RK-AGIKP  165 (343)
T ss_pred             Hh-cCCCC
Confidence            54 46653

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=99.81  E-value=3.1e-19  Score=158.31  Aligned_cols=135  Identities=22%  Similarity=0.258  Sum_probs=113.0

Q ss_pred             eeEEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCC-CCCCCcccccceEEEEEEeCCCCCCC
Q psy7798         103 CKAAVAWEPKKP---LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDS-EGKFPCVLGHEGSGIVESVGEGVTSV  178 (261)
Q Consensus       103 ~~~~~~~~~g~~---l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~-~~~~p~~lG~E~~G~V~~vG~~v~~~  178 (261)
                      |+++++.+++.+   +++.+.+.|.++++||+|+|.++|+|+.|++...|.++ ....|.++|||++|+|+++|++|++|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   80 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL   80 (324)
T ss_pred             CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence            578888777653   78899999999999999999999999999999988765 23457899999999999999999999


Q ss_pred             CCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCc
Q psy7798         179 APGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDF  258 (261)
Q Consensus       179 ~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L  258 (261)
                      ++||+|+++..                      .|++.++.........++|+++++++++++++.++|||+++ ..+++
T Consensus        81 ~~Gd~V~~~~~----------------------~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~  137 (324)
T cd08292          81 QVGQRVAVAPV----------------------HGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGV  137 (324)
T ss_pred             CCCCEEEeccC----------------------CCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCC
Confidence            99999988641                      14455555555577889999999999999999999999998 44666


Q ss_pred             cc
Q psy7798         259 EK  260 (261)
Q Consensus       259 ~~  260 (261)
                      ++
T Consensus       138 ~~  139 (324)
T cd08292         138 KP  139 (324)
T ss_pred             CC
Confidence            53

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=99.81  E-value=3.3e-19  Score=158.23  Aligned_cols=135  Identities=21%  Similarity=0.218  Sum_probs=105.1

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcC-hhhHHHHcCCCCC---CCCCcccccceEEEEEEeCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAIC-HTDAYTLDGLDSE---GKFPCVLGHEGSGIVESVGEGVTSV  178 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln-~~Dv~~~~g~~~~---~~~p~~lG~E~~G~V~~vG~~v~~~  178 (261)
                      ++++++.+++. +++.+.+.|.|+++||+|||+++||| .+|++...|.++.   ..+|.++|||++|+|+++|+++ +|
T Consensus         2 ~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~   79 (308)
T TIGR01202         2 TQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GF   79 (308)
T ss_pred             ceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-CC
Confidence            67888877664 89999999999999999999999997 6999999887653   2468999999999999999998 69


Q ss_pred             CCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhc
Q psy7798         179 APGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIK  254 (261)
Q Consensus       179 ~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~  254 (261)
                      ++||||+...    ..|..|..+         ..|++.++.+++.+...++|++++++. +.++ .+.|||+++..
T Consensus        80 ~vGdrV~~~~----~~c~~~~~~---------~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~  140 (308)
T TIGR01202        80 RPGDRVFVPG----SNCYEDVRG---------LFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG  140 (308)
T ss_pred             CCCCEEEEeC----ccccccccc---------cCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh
Confidence            9999998732    234332211         125565566666678889999999865 5555 46899999954

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=99.81  E-value=3.9e-19  Score=159.04  Aligned_cols=149  Identities=30%  Similarity=0.459  Sum_probs=120.6

Q ss_pred             EecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHc-CCCCC--CCCCcccccceEEEEEEeCCCCCCCCCCCEE
Q psy7798         108 AWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLD-GLDSE--GKFPCVLGHEGSGIVESVGEGVTSVAPGDHV  184 (261)
Q Consensus       108 ~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~-g~~~~--~~~p~~lG~E~~G~V~~vG~~v~~~~vGDrV  184 (261)
                      +++.+ .+++.+.+.|.++++||+|||.++|+|+.|++... |.++.  ..+|.++|+|++|+|+++|++|++|++||+|
T Consensus         3 ~~~~~-~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V   81 (339)
T cd08232           3 IHAAG-DLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRV   81 (339)
T ss_pred             eccCC-ceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEE
Confidence            34444 38899999999999999999999999999998763 43321  2346789999999999999999999999999


Q ss_pred             EEeeccCCCCCcccccCcccccccccc----------ccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhc
Q psy7798         185 IPLYIPQCNECKFCKSSKTNLCTKIRT----------TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIK  254 (261)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~  254 (261)
                      ++.+...|+.|.+|..+..+.|.....          .|++.++..+......++|+++++++|+. +..++|||++|.+
T Consensus        82 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~  160 (339)
T cd08232          82 AVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNR  160 (339)
T ss_pred             EEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHh
Confidence            998888999999999999999976421          23344444555577889999999999875 6899999999976


Q ss_pred             ccCc
Q psy7798         255 RRDF  258 (261)
Q Consensus       255 ~a~L  258 (261)
                      .+.+
T Consensus       161 ~~~~  164 (339)
T cd08232         161 AGDL  164 (339)
T ss_pred             cCCC
Confidence            6554

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=99.81  E-value=4.8e-19  Score=158.82  Aligned_cols=155  Identities=25%  Similarity=0.358  Sum_probs=123.5

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCC-CCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPP-KAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~-~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      |+++++++++. +.+.+.+.|.| +++||+||+.++|+|++|++...|.++. ..|.++|||++|+|+++|++|+++++|
T Consensus         1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~~G   78 (345)
T cd08287           1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVKPG   78 (345)
T ss_pred             CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccCCC
Confidence            57888877664 88999999986 8999999999999999999998887653 346899999999999999999999999


Q ss_pred             CEEEEeeccCCCCCcccccCccccccccccc----cceeeeeeeecc---cccccCCCCChhhhc-----cccchHHHHH
Q psy7798         182 DHVIPLYIPQCNECKFCKSSKTNLCTKIRTT----QLFLTSNVTISD---FNMGYSMTGSLERGS-----KRDNSFQTTH  249 (261)
Q Consensus       182 DrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~~~~~~---~~~~~~~~~s~~eaA-----~lp~~~~TA~  249 (261)
                      |+|++.....|+.|.+|..+..+.|......    +|++++++.++.   .+.++|++++++++.     ++...++|||
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~~a~  158 (345)
T cd08287          79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGH  158 (345)
T ss_pred             CEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHHHHH
Confidence            9998855567999999999988888754332    255566666653   789999999882211     2336789999


Q ss_pred             HHHhcccCccc
Q psy7798         250 FAVIKRRDFEK  260 (261)
Q Consensus       250 ~aL~~~a~L~~  260 (261)
                      +++ ..+++++
T Consensus       159 ~~~-~~~~~~~  168 (345)
T cd08287         159 HAA-VSAGVRP  168 (345)
T ss_pred             HHH-HhcCCCC
Confidence            998 4666653

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=99.81  E-value=2.8e-19  Score=159.36  Aligned_cols=134  Identities=27%  Similarity=0.221  Sum_probs=109.7

Q ss_pred             eeEEEEecCCCC-----cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCC
Q psy7798         103 CKAAVAWEPKKP-----LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVT  176 (261)
Q Consensus       103 ~~~~~~~~~g~~-----l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~  176 (261)
                      |+++++.+++++     +++.+.+.|.|+++||+|+|.++|+|+.|++...|.++. ..+|.++|||++|+|+++|++|+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~   80 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL   80 (324)
T ss_pred             CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence            578888887753     777888899999999999999999999999999887653 34678999999999999999999


Q ss_pred             C-CCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcc
Q psy7798         177 S-VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKR  255 (261)
Q Consensus       177 ~-~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~  255 (261)
                      + |++||+|+++..                  .   .|++.++..+......++|++++++++|++++.++|||.+ .+.
T Consensus        81 ~~~~vGd~V~~~~~------------------~---~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~-~~~  138 (324)
T cd08291          81 AQSLIGKRVAFLAG------------------S---YGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGM-LET  138 (324)
T ss_pred             ccCCCCCEEEecCC------------------C---CCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHH-HHh
Confidence            6 999999987531                  0   1445555555557788999999999999999999999754 455


Q ss_pred             cCc
Q psy7798         256 RDF  258 (261)
Q Consensus       256 a~L  258 (261)
                      +++
T Consensus       139 ~~~  141 (324)
T cd08291         139 ARE  141 (324)
T ss_pred             hcc
Confidence            543

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=99.81  E-value=4.9e-19  Score=158.56  Aligned_cols=149  Identities=21%  Similarity=0.283  Sum_probs=119.0

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCC-----------CCCCCcccccceEEEEEEe
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDS-----------EGKFPCVLGHEGSGIVESV  171 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~-----------~~~~p~~lG~E~~G~V~~v  171 (261)
                      |+++++.++  .+++++.+.|+|+++||+|+|.++|+|+.|++...|..+           ....|.++|+|++|+|+++
T Consensus         1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v   78 (341)
T cd08262           1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY   78 (341)
T ss_pred             CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence            577887665  688999999999999999999999999999999887321           1234678999999999999


Q ss_pred             CCCCCC-CCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHH
Q psy7798         172 GEGVTS-VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHF  250 (261)
Q Consensus       172 G~~v~~-~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~  250 (261)
                      |++|++ |++||+|++++...|+.|..|..+...     ...|++.++..+....+.++|+++++++++ ++..++|||+
T Consensus        79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~  152 (341)
T cd08262          79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP-----EAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLH  152 (341)
T ss_pred             CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc-----CCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHH
Confidence            999997 999999999988889999998543211     122444444455557788999999999887 7889999999


Q ss_pred             HHhcccCccc
Q psy7798         251 AVIKRRDFEK  260 (261)
Q Consensus       251 aL~~~a~L~~  260 (261)
                      ++ ..+++++
T Consensus       153 ~~-~~~~~~~  161 (341)
T cd08262         153 AV-RRARLTP  161 (341)
T ss_pred             HH-HhcCCCC
Confidence            95 7777764

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.80  E-value=1.1e-18  Score=156.39  Aligned_cols=156  Identities=28%  Similarity=0.440  Sum_probs=128.5

Q ss_pred             eeEEEEecCC-CCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCCCC
Q psy7798         103 CKAAVAWEPK-KPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSVAP  180 (261)
Q Consensus       103 ~~~~~~~~~g-~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~~v  180 (261)
                      |+++++.+++ ..+++.+.+.|.|+++||+|++.++++|++|+....|.++. ...|..+|+|++|+|+++|++++.|++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~   80 (341)
T cd08297           1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV   80 (341)
T ss_pred             CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence            6788887776 45899999999999999999999999999999999887653 234568899999999999999999999


Q ss_pred             CCEEEEee-ccCCCCCcccccCcccccccccc-----ccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhc
Q psy7798         181 GDHVIPLY-IPQCNECKFCKSSKTNLCTKIRT-----TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIK  254 (261)
Q Consensus       181 GDrV~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~  254 (261)
                      ||+|++.+ ...|+.|.+|..+....|.....     .+++.++.......+.++|++++++++++++..++|||+++..
T Consensus        81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~  160 (341)
T cd08297          81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKK  160 (341)
T ss_pred             CCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHHh
Confidence            99999875 36789999999998888865322     2334444455557788999999999999999999999999865


Q ss_pred             ccCcc
Q psy7798         255 RRDFE  259 (261)
Q Consensus       255 ~a~L~  259 (261)
                      . +++
T Consensus       161 ~-~~~  164 (341)
T cd08297         161 A-GLK  164 (341)
T ss_pred             c-CCC
Confidence            3 554

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PLN02702 L-idonate 5-dehydrogenase

Probab=99.80  E-value=9e-19  Score=158.62  Aligned_cols=155  Identities=26%  Similarity=0.418  Sum_probs=120.8

Q ss_pred             eeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCC---CCCCCcccccceEEEEEEeCCCCCCC
Q psy7798         102 ECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDS---EGKFPCVLGHEGSGIVESVGEGVTSV  178 (261)
Q Consensus       102 ~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~---~~~~p~~lG~E~~G~V~~vG~~v~~~  178 (261)
                      +++++++.++. .+++.+.+.|.|+++||+|||.++|+|++|++...|...   ....|.++|+|++|+|+++|+++++|
T Consensus        17 ~~~~~~~~~~~-~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (364)
T PLN02702         17 ENMAAWLVGVN-TLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHL   95 (364)
T ss_pred             ccceEEEecCC-ceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCC
Confidence            45555555553 488888888889999999999999999999999876321   12246789999999999999999999


Q ss_pred             CCCCEEEEeeccCCCCCcccccCcccccccccc------ccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHH
Q psy7798         179 APGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT------TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAV  252 (261)
Q Consensus       179 ~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL  252 (261)
                      ++||+|++.+..+|+.|..|..+..+.|+....      .|++.++..+....+.++|+++++++++.. ..+.+||+++
T Consensus        96 ~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~~  174 (364)
T PLN02702         96 VVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVHAC  174 (364)
T ss_pred             CCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHHHH
Confidence            999999998888999999999999999975321      234444444444678899999999999862 3455688887


Q ss_pred             hcccCcc
Q psy7798         253 IKRRDFE  259 (261)
Q Consensus       253 ~~~a~L~  259 (261)
                       ..++++
T Consensus       175 -~~~~~~  180 (364)
T PLN02702        175 -RRANIG  180 (364)
T ss_pred             -HhcCCC
Confidence             566654

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=99.80  E-value=6e-19  Score=158.39  Aligned_cols=152  Identities=32%  Similarity=0.456  Sum_probs=122.8

Q ss_pred             EEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcC-CCCC--CCCCcccccceEEEEEEeCCCCCCCCCCC
Q psy7798         106 AVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDG-LDSE--GKFPCVLGHEGSGIVESVGEGVTSVAPGD  182 (261)
Q Consensus       106 ~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g-~~~~--~~~p~~lG~E~~G~V~~vG~~v~~~~vGD  182 (261)
                      +.+.+++ .+.+++.+.|.|.++||+|+|.++++|+.|++...+ ..+.  ...|.++|+|++|+|+++|+++++|++||
T Consensus         2 ~~~~~~~-~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd   80 (343)
T cd05285           2 AVLHGPG-DLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGD   80 (343)
T ss_pred             ceEecCC-ceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCC
Confidence            3455663 488999999999999999999999999999987642 2211  13466889999999999999999999999


Q ss_pred             EEEEeeccCCCCCcccccCcccccccccc------ccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhccc
Q psy7798         183 HVIPLYIPQCNECKFCKSSKTNLCTKIRT------TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRR  256 (261)
Q Consensus       183 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a  256 (261)
                      +|++.+..+|++|.+|..+....|+....      .|++.++..+......++|+++++++++.+ ..+.|||+++ +.+
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~  158 (343)
T cd05285          81 RVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRA  158 (343)
T ss_pred             EEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-Hhc
Confidence            99988888999999999999999986422      234444444445778899999999999877 5889999997 777


Q ss_pred             Cccc
Q psy7798         257 DFEK  260 (261)
Q Consensus       257 ~L~~  260 (261)
                      ++++
T Consensus       159 ~~~~  162 (343)
T cd05285         159 GVRP  162 (343)
T ss_pred             CCCC
Confidence            7764

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=99.80  E-value=9.3e-19  Score=156.10  Aligned_cols=154  Identities=27%  Similarity=0.362  Sum_probs=128.3

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGD  182 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGD  182 (261)
                      |+++++.+++ .+++.+.+.|+++++||+|+|.++++|+.|+....|.++. .+|.++|+|++|+|+++|++|++|++||
T Consensus         1 ~~a~~~~~~~-~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd   78 (334)
T cd08234           1 MKALVYEGPG-ELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGD   78 (334)
T ss_pred             CeeEEecCCC-ceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCC
Confidence            5778887776 4888899999999999999999999999999999887763 3677999999999999999999999999


Q ss_pred             EEEEeeccCCCCCcccccCccccccccccc-----cceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccC
Q psy7798         183 HVIPLYIPQCNECKFCKSSKTNLCTKIRTT-----QLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRD  257 (261)
Q Consensus       183 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~  257 (261)
                      +|++.....|++|.+|..+..+.|......     |.+.++.......+..+|+++++.+++.+ ..++||+++| +.++
T Consensus        79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~  156 (334)
T cd08234          79 RVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-DLLG  156 (334)
T ss_pred             EEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-HhcC
Confidence            999887778999999988888877653222     33444445555788999999999999876 7889999998 7777


Q ss_pred             ccc
Q psy7798         258 FEK  260 (261)
Q Consensus       258 L~~  260 (261)
                      +++
T Consensus       157 ~~~  159 (334)
T cd08234         157 IKP  159 (334)
T ss_pred             CCC
Confidence            754

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=99.80  E-value=7.9e-19  Score=157.40  Aligned_cols=150  Identities=25%  Similarity=0.275  Sum_probs=122.8

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCC-C--CCCCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL-D--SEGKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~-~--~~~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      ||++++.++++.+++.+.+.|.|+++||+|++.++++|++|+.+..|. +  +....|.++|+|++|+|+++|++|++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~   80 (341)
T PRK05396          1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK   80 (341)
T ss_pred             CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence            578888888877999999999999999999999999999999977653 1  1223567899999999999999999999


Q ss_pred             CCCEEEEeeccCCCCCcccccCcccccccccc----ccceeeee-eeecccccccCCCCChhhhccccchHHHHHHHHh
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT----TQLFLTSN-VTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVI  253 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~-~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~  253 (261)
                      +||+|++.+...|+.|..|..+..+.|+....    ..|+++++ .+......++|+++++++++. ...+.++++++.
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~-~~~~~~~~~~~~  158 (341)
T PRK05396         81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAI-FDPFGNAVHTAL  158 (341)
T ss_pred             CCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHh-hhHHHHHHHHHH
Confidence            99999998888999999999999999976421    12444444 444477889999999998884 467788877764

>KOG0025|consensus

Probab=99.79  E-value=7.4e-19  Score=149.55  Aligned_cols=138  Identities=24%  Similarity=0.282  Sum_probs=118.6

Q ss_pred             eeeeEEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCC
Q psy7798         101 IECKAAVAWEPKKP---LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVT  176 (261)
Q Consensus       101 ~~~~~~~~~~~g~~---l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~  176 (261)
                      ...+++++...|+|   +++.+++.|.....+|+||..|+-||++|+..+.|.||. +.+|.+-|.|++|.|+.||++|+
T Consensus        18 ~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~vk   97 (354)
T KOG0025|consen   18 ARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSNVK   97 (354)
T ss_pred             cccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCCcC
Confidence            45688999988877   778888888887778999999999999999999999986 56799999999999999999999


Q ss_pred             CCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeec-ccccccCCCCChhhhccccchHHHHHHHHhcc
Q psy7798         177 SVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTIS-DFNMGYSMTGSLERGSKRDNSFQTTHFAVIKR  255 (261)
Q Consensus       177 ~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~  255 (261)
                      +|++||+|+-...+                      -|+++.+.+.. +..+++++.++++.||++.++-+|||.+|.+.
T Consensus        98 gfk~Gd~VIp~~a~----------------------lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~df  155 (354)
T KOG0025|consen   98 GFKPGDWVIPLSAN----------------------LGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDF  155 (354)
T ss_pred             ccCCCCeEeecCCC----------------------CccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHH
Confidence            99999999876531                      45566665555 55677777799999999999999999999988


Q ss_pred             cCccc
Q psy7798         256 RDFEK  260 (261)
Q Consensus       256 a~L~~  260 (261)
                      -+|++
T Consensus       156 v~L~~  160 (354)
T KOG0025|consen  156 VQLNK  160 (354)
T ss_pred             HhcCC
Confidence            88765

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.79  E-value=2e-18  Score=154.93  Aligned_cols=154  Identities=20%  Similarity=0.150  Sum_probs=116.3

Q ss_pred             eeEEEEecCCC--CcEEEE-eeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCC--------------------CCCCCcc
Q psy7798         103 CKAAVAWEPKK--PLSLET-IQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDS--------------------EGKFPCV  159 (261)
Q Consensus       103 ~~~~~~~~~g~--~l~~~~-~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~--------------------~~~~p~~  159 (261)
                      |+++.+..++.  .+.+.+ .+.|.|.+++|+|||.++|+|++|+++..|.++                    ....|.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~   80 (350)
T cd08274           1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI   80 (350)
T ss_pred             CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence            46677766553  356654 467778999999999999999999999888653                    1335788


Q ss_pred             cccceEEEEEEeCCCCCCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhc
Q psy7798         160 LGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGS  239 (261)
Q Consensus       160 lG~E~~G~V~~vG~~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA  239 (261)
                      +|||++|+|+++|+++++|++||||++.+...|+.|..|....   +......|++.++.........++|+++++++++
T Consensus        81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a  157 (350)
T cd08274          81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADID---YIGSERDGGFAEYTVVPAENAYPVNSPLSDVELA  157 (350)
T ss_pred             cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccccc---ccCCCCCccceEEEEecHHHceeCCCCCCHHHHH
Confidence            9999999999999999999999999987766776665542110   0111112445555555557788999999999999


Q ss_pred             cccchHHHHHHHHhcccCccc
Q psy7798         240 KRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       240 ~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      +++.+++|||+++ ..+++++
T Consensus       158 ~l~~~~~ta~~~~-~~~~~~~  177 (350)
T cd08274         158 TFPCSYSTAENML-ERAGVGA  177 (350)
T ss_pred             hcccHHHHHHHHH-hhcCCCC
Confidence            9999999999998 6677653

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=99.79  E-value=1.2e-18  Score=155.83  Aligned_cols=137  Identities=29%  Similarity=0.337  Sum_probs=114.9

Q ss_pred             eeEEEEecCCCC---cEEEEeeCCCCCC-CeEEEEEEEEEcChhhHHHHcCCCCCC-C----CCcccccceEEEEEEeCC
Q psy7798         103 CKAAVAWEPKKP---LSLETIQVAPPKA-GEVRIKIVSTAICHTDAYTLDGLDSEG-K----FPCVLGHEGSGIVESVGE  173 (261)
Q Consensus       103 ~~~~~~~~~g~~---l~~~~~~~p~~~~-~eVlVkV~a~gln~~Dv~~~~g~~~~~-~----~p~~lG~E~~G~V~~vG~  173 (261)
                      |+++.+.+++.+   +.+.+.+.|.|.+ ++|+|++.++|+|+.|++...|.++.. .    .|.++|+|++|+|+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS   80 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence            688888888765   8999999998887 999999999999999999998876532 2    567899999999999999


Q ss_pred             CCCCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHh
Q psy7798         174 GVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVI  253 (261)
Q Consensus       174 ~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~  253 (261)
                      ++..|++||+|+++..                     ..|++.++.........++|++++++++++++..++|||++|.
T Consensus        81 ~v~~~~~Gd~V~~~~~---------------------~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~  139 (341)
T cd08290          81 GVKSLKPGDWVIPLRP---------------------GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLE  139 (341)
T ss_pred             CCCCCCCCCEEEecCC---------------------CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHH
Confidence            9999999999997642                     0144555555555788899999999999999999999999998


Q ss_pred             cccCccc
Q psy7798         254 KRRDFEK  260 (261)
Q Consensus       254 ~~a~L~~  260 (261)
                      +.+++++
T Consensus       140 ~~~~~~~  146 (341)
T cd08290         140 DFVKLQP  146 (341)
T ss_pred             hhcccCC
Confidence            7777654

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=99.78  E-value=3.2e-18  Score=156.27  Aligned_cols=146  Identities=23%  Similarity=0.398  Sum_probs=117.5

Q ss_pred             CcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCC------CC-CCCCcccccceEEEEEEeCCCCCCCCCCCEEEE
Q psy7798         114 PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLD------SE-GKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIP  186 (261)
Q Consensus       114 ~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~------~~-~~~p~~lG~E~~G~V~~vG~~v~~~~vGDrV~~  186 (261)
                      .+++++.+.|.+++++|+|+|.++|+|++|++...|..      +. ..+|.++|||++|+|+++|++|++|++||+|++
T Consensus        38 ~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~  117 (384)
T cd08265          38 ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTA  117 (384)
T ss_pred             CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEE
Confidence            49999999999999999999999999999999886421      21 335689999999999999999999999999999


Q ss_pred             eeccCCCCCcccccCcccccccccc-----ccceeeeeeeecccccccCCC-------CChhhhccccchHHHHHHHHhc
Q psy7798         187 LYIPQCNECKFCKSSKTNLCTKIRT-----TQLFLTSNVTISDFNMGYSMT-------GSLERGSKRDNSFQTTHFAVIK  254 (261)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~-------~s~~eaA~lp~~~~TA~~aL~~  254 (261)
                      .+..+|+.|..|..+..+.|.....     .|++.++..+....+.++|++       ++++ +|+++..++|||++|..
T Consensus       118 ~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~  196 (384)
T cd08265         118 EEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFI  196 (384)
T ss_pred             CCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHh
Confidence            8888999999999999999886432     233444444444677888875       3445 77788999999999976


Q ss_pred             c-cCccc
Q psy7798         255 R-RDFEK  260 (261)
Q Consensus       255 ~-a~L~~  260 (261)
                      . +++++
T Consensus       197 ~~~~~~~  203 (384)
T cd08265         197 RGGGFRP  203 (384)
T ss_pred             hcCCCCC
Confidence            5 56553

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd05281 TDH Threonine dehydrogenase

Probab=99.77  E-value=5.6e-18  Score=151.97  Aligned_cols=150  Identities=27%  Similarity=0.354  Sum_probs=121.5

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCC---CCCCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLD---SEGKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~---~~~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      ||++.+..++..+.+.+.+.|.|+++||+|+|.++|+|+.|+++..+..   .....|.++|+|++|+|+.+|++++.|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~   80 (341)
T cd05281           1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK   80 (341)
T ss_pred             CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence            5778888777679999999999999999999999999999998765421   1123456899999999999999999999


Q ss_pred             CCCEEEEeeccCCCCCcccccCcccccccccc----ccceeeeeeeec-ccccccCCCCChhhhccccchHHHHHHHHh
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT----TQLFLTSNVTIS-DFNMGYSMTGSLERGSKRDNSFQTTHFAVI  253 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~-~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~  253 (261)
                      +||+|++....+|+.|..|..+..+.|.....    ..|.++.++.++ ....++|+++++ ++++++..+.+||+++.
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~-~~a~~~~~~~~a~~~~~  158 (341)
T cd05281          81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPP-EIASIQEPLGNAVHTVL  158 (341)
T ss_pred             CCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCH-HHhhhhhHHHHHHHHHH
Confidence            99999998878999999999999988865322    124444454444 778899999988 55578899999999874

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.77  E-value=7.1e-18  Score=149.68  Aligned_cols=149  Identities=21%  Similarity=0.280  Sum_probs=119.0

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGD  182 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGD  182 (261)
                      |+++++.+++ .+++++.+.|.|+++||+|+|.++++|++|++...|.++   .|.++|+|++|+|+++|++   +++||
T Consensus         1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~   73 (319)
T cd08242           1 MKALVLDGGL-DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK   73 (319)
T ss_pred             CeeEEEeCCC-cEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence            5788887765 599999999999999999999999999999999988764   4678999999999999987   78999


Q ss_pred             EEEEeeccCCCCCcccccCcccccccccc------ccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhccc
Q psy7798         183 HVIPLYIPQCNECKFCKSSKTNLCTKIRT------TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRR  256 (261)
Q Consensus       183 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a  256 (261)
                      ||...+..+|+.|.+|..+....|.....      .|++.++..+......++|+++++++++.+ ..+.++| ++...+
T Consensus        74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~-~~~~~~  151 (319)
T cd08242          74 RVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAAL-EILEQV  151 (319)
T ss_pred             eEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHH-HHHHhc
Confidence            99988877899999999988877765321      234444445555778899999999998864 3444555 444677


Q ss_pred             Cccc
Q psy7798         257 DFEK  260 (261)
Q Consensus       257 ~L~~  260 (261)
                      ++++
T Consensus       152 ~~~~  155 (319)
T cd08242         152 PITP  155 (319)
T ss_pred             CCCC
Confidence            6654

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=99.77  E-value=5.6e-18  Score=150.73  Aligned_cols=138  Identities=22%  Similarity=0.233  Sum_probs=115.5

Q ss_pred             eeeEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         102 ECKAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       102 ~~~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      +|+++.+.++|.+  +++.+.+.|.|+++||+|+|.++|+|+.|++...|.++....|.++|+|++|+|+.+|++|+.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~   80 (327)
T PRK10754          1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK   80 (327)
T ss_pred             CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence            3788888887754  88889999999999999999999999999999988876555678899999999999999999999


Q ss_pred             CCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCcc
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFE  259 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~  259 (261)
                      +||+|++...                     ..+++.++..+.......+|++++++++++++..++|||+++.+.++++
T Consensus        81 ~Gd~V~~~~~---------------------~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~  139 (327)
T PRK10754         81 VGDRVVYAQS---------------------ALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIK  139 (327)
T ss_pred             CCCEEEECCC---------------------CCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence            9999985321                     0134445555555778899999999999999999999999998877775


Q ss_pred             c
Q psy7798         260 K  260 (261)
Q Consensus       260 ~  260 (261)
                      +
T Consensus       140 ~  140 (327)
T PRK10754        140 P  140 (327)
T ss_pred             C
Confidence            4

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=99.76  E-value=6.8e-18  Score=151.35  Aligned_cols=144  Identities=26%  Similarity=0.355  Sum_probs=118.0

Q ss_pred             ecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCC---CCCCCCcccccceEEEEEEeCCCCCCCCCCCEEE
Q psy7798         109 WEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLD---SEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHVI  185 (261)
Q Consensus       109 ~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~---~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGDrV~  185 (261)
                      ++++..+++.+.+.|.|+++||+|+|.++++|+.|+.+..+..   .....|.++|+|++|+|+++|++|++|++||+|+
T Consensus         5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~   84 (340)
T TIGR00692         5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS   84 (340)
T ss_pred             ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence            4677779999999999999999999999999999998866531   1123456899999999999999999999999999


Q ss_pred             EeeccCCCCCcccccCcccccccccc-----ccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHh
Q psy7798         186 PLYIPQCNECKFCKSSKTNLCTKIRT-----TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVI  253 (261)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~  253 (261)
                      +.....|+.|..|..+..+.|...+.     .|++.++.........++|++++++ .|+++..+.|||+++.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~-~a~~~~~~~~a~~~~~  156 (340)
T TIGR00692        85 VETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPE-YATIQEPLGNAVHTVL  156 (340)
T ss_pred             ECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChH-hhhhcchHHHHHHHHH
Confidence            98888899999999999998877422     2344445555557788999999985 5568899999999873

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=99.76  E-value=7.4e-18  Score=151.22  Aligned_cols=138  Identities=22%  Similarity=0.192  Sum_probs=113.3

Q ss_pred             eeEEEEecCCCC---cEEEEeeCCCC-CCCeEEEEEEEEEcChhhHHHHcCCCC---------------CCCCCcccccc
Q psy7798         103 CKAAVAWEPKKP---LSLETIQVAPP-KAGEVRIKIVSTAICHTDAYTLDGLDS---------------EGKFPCVLGHE  163 (261)
Q Consensus       103 ~~~~~~~~~g~~---l~~~~~~~p~~-~~~eVlVkV~a~gln~~Dv~~~~g~~~---------------~~~~p~~lG~E  163 (261)
                      |+++++.+++++   +.+.+.+.|.| +++||+|+|.++++|+.|++...|...               ....|.++|+|
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e   80 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD   80 (350)
T ss_pred             CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence            577777777764   88888899988 599999999999999999999887421               23457799999


Q ss_pred             eEEEEEEeCCCCCCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccc
Q psy7798         164 GSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDN  243 (261)
Q Consensus       164 ~~G~V~~vG~~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~  243 (261)
                      ++|+|+.+|++|++|++||||+++...                   ...|++.++..+.......+|+++++++++.++.
T Consensus        81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~-------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~  141 (350)
T cd08248          81 CSGVVVDIGSGVKSFEIGDEVWGAVPP-------------------WSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPY  141 (350)
T ss_pred             eEEEEEecCCCcccCCCCCEEEEecCC-------------------CCCccceeEEEecHHHeecCCCCCCHHHHhhchh
Confidence            999999999999999999999986421                   0114555566666678889999999999999999


Q ss_pred             hHHHHHHHHhcccCcc
Q psy7798         244 SFQTTHFAVIKRRDFE  259 (261)
Q Consensus       244 ~~~TA~~aL~~~a~L~  259 (261)
                      .++|||++|.+.++++
T Consensus       142 ~~~ta~~~l~~~~~~~  157 (350)
T cd08248         142 AGLTAWSALVNVGGLN  157 (350)
T ss_pred             HHHHHHHHHHHhccCC
Confidence            9999999998877764

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.76  E-value=2.6e-17  Score=146.28  Aligned_cols=157  Identities=21%  Similarity=0.170  Sum_probs=120.6

Q ss_pred             eeEEEEecCC--CCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         103 CKAAVAWEPK--KPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       103 ~~~~~~~~~g--~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      |+++++...+  +.+.+.+.+.|.++++||+|++.++|+|+.|++...|.++. ...|.++|||++|+|+.+|+.+.+|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK   80 (336)
T ss_pred             CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence            6788887664  44888888888889999999999999999999999887653 23567899999999999999999999


Q ss_pred             CCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCcc
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFE  259 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~  259 (261)
                      +||+|++.....|+.+.++..... .+......+++.++.......+.++|+++++.+++.++..++|||++|.+.++++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~  159 (336)
T cd08276          81 VGDRVVPTFFPNWLDGPPTAEDEA-SALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLK  159 (336)
T ss_pred             CCCEEEEecccccccccccccccc-cccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCC
Confidence            999999876544443332222211 1112222345556666666788999999999999999999999999998877765


Q ss_pred             c
Q psy7798         260 K  260 (261)
Q Consensus       260 ~  260 (261)
                      +
T Consensus       160 ~  160 (336)
T cd08276         160 P  160 (336)
T ss_pred             C
Confidence            3

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=99.75  E-value=2.1e-17  Score=147.08  Aligned_cols=134  Identities=24%  Similarity=0.190  Sum_probs=112.3

Q ss_pred             eeeEEEEecCCC----CcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCC
Q psy7798         102 ECKAAVAWEPKK----PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVT  176 (261)
Q Consensus       102 ~~~~~~~~~~g~----~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~  176 (261)
                      .|+++++.+++.    ++++++.+.|.|.++||+|+|.++|+|+.|++...|.++. ..+|.++|+|++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~   80 (329)
T cd08250           1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT   80 (329)
T ss_pred             CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence            378888877654    5889999999999999999999999999999998887653 45678999999999999999999


Q ss_pred             CCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhccc
Q psy7798         177 SVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRR  256 (261)
Q Consensus       177 ~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a  256 (261)
                      +|++||+|+++..                       |++.++.........++|++  +.++++++.+++|||++|.+.+
T Consensus        81 ~~~~Gd~V~~~~~-----------------------g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~  135 (329)
T cd08250          81 DFKVGDAVATMSF-----------------------GAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVG  135 (329)
T ss_pred             CCCCCCEEEEecC-----------------------cceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhc
Confidence            9999999998531                       45556666666778888876  4688899999999999998877


Q ss_pred             Cccc
Q psy7798         257 DFEK  260 (261)
Q Consensus       257 ~L~~  260 (261)
                      ++++
T Consensus       136 ~~~~  139 (329)
T cd08250         136 EMKS  139 (329)
T ss_pred             CCCC
Confidence            7764

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=99.75  E-value=2.8e-17  Score=146.11  Aligned_cols=137  Identities=22%  Similarity=0.224  Sum_probs=113.4

Q ss_pred             eeeEEEEecCCC--CcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCC
Q psy7798         102 ECKAAVAWEPKK--PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSV  178 (261)
Q Consensus       102 ~~~~~~~~~~g~--~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~  178 (261)
                      +||++++...+.  .+.+.+.+.|.+.++||+|+|.++|+|+.|+....|.++. ...|.++|+|++|+|+++|++++++
T Consensus         1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~   80 (334)
T PTZ00354          1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF   80 (334)
T ss_pred             CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence            588999887775  3677777778889999999999999999999999886642 3345689999999999999999999


Q ss_pred             CCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCc
Q psy7798         179 APGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDF  258 (261)
Q Consensus       179 ~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L  258 (261)
                      ++||+|+++..                      .|++.++.......+.++|+++++++++.++.++.|||++|.+.+++
T Consensus        81 ~~Gd~V~~~~~----------------------~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~  138 (334)
T PTZ00354         81 KEGDRVMALLP----------------------GGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDV  138 (334)
T ss_pred             CCCCEEEEecC----------------------CCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999987631                      13455555555577889999999999999999999999999887776


Q ss_pred             cc
Q psy7798         259 EK  260 (261)
Q Consensus       259 ~~  260 (261)
                      ++
T Consensus       139 ~~  140 (334)
T PTZ00354        139 KK  140 (334)
T ss_pred             CC
Confidence            53

>cd08293 PTGR2 Prostaglandin reductase

Probab=99.75  E-value=1.2e-17  Score=149.89  Aligned_cols=122  Identities=11%  Similarity=0.022  Sum_probs=93.6

Q ss_pred             cEEEEeeCCCC-CCCeEEEEEEEEEcChhhHHHHc---CCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCEEEEeecc
Q psy7798         115 LSLETIQVAPP-KAGEVRIKIVSTAICHTDAYTLD---GLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIP  190 (261)
Q Consensus       115 l~~~~~~~p~~-~~~eVlVkV~a~gln~~Dv~~~~---g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGDrV~~~~~~  190 (261)
                      +++.+.+.|.| ++|||+|||+|+|||+.|.....   |......+|.++|+|++|+|+++|++|++|++||||+++.  
T Consensus        23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--  100 (345)
T cd08293          23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN--  100 (345)
T ss_pred             eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC--
Confidence            78888999987 49999999999999999964332   2111134567899999999999999999999999998631  


Q ss_pred             CCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhh----hccccchHHHHHHHHhcccCccc
Q psy7798         191 QCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLER----GSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~e----aA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                                            +.+.++.++....+.++|+++++++    +++++.+++|||++|.+.+++++
T Consensus       101 ----------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~  152 (345)
T cd08293         101 ----------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITP  152 (345)
T ss_pred             ----------------------CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCC
Confidence                                  1234444555577888998754332    66789999999999988887763

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.74  E-value=2.9e-17  Score=144.43  Aligned_cols=130  Identities=14%  Similarity=0.074  Sum_probs=105.5

Q ss_pred             eeEEEEecCC-CCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCC
Q psy7798         103 CKAAVAWEPK-KPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       103 ~~~~~~~~~g-~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      |+++++.+.+ ..+++.+.+.|.++++||+|++.++|+|+.|++...+.    ..|.++|+|++|+|+++|++++.|++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~G   76 (305)
T cd08270           1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAVG   76 (305)
T ss_pred             CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCCC
Confidence            4677776654 22667788888999999999999999999999887632    224689999999999999999999999


Q ss_pred             CEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCc
Q psy7798         182 DHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDF  258 (261)
Q Consensus       182 DrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L  258 (261)
                      |+|+++..                      .|++.++.......+.++|+++++++++++++.++|||+++...+.+
T Consensus        77 d~V~~~~~----------------------~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~  131 (305)
T cd08270          77 ARVVGLGA----------------------MGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL  131 (305)
T ss_pred             CEEEEecC----------------------CcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC
Confidence            99987531                      14455555555578889999999999999999999999999766543

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=99.74  E-value=1.4e-17  Score=149.52  Aligned_cols=141  Identities=24%  Similarity=0.228  Sum_probs=113.3

Q ss_pred             eeEEEEecCC-CCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCC
Q psy7798         103 CKAAVAWEPK-KPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       103 ~~~~~~~~~g-~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      |+++++..++ ..+++.+.+.|.|+++||+|+|.++|+|++|+....+.+ ....|.++|+|++|+|+.+|++++.|++|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G   79 (339)
T cd08249           1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG   79 (339)
T ss_pred             CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence            5788888775 448888999999999999999999999999998775544 12245789999999999999999999999


Q ss_pred             CEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCc
Q psy7798         182 DHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDF  258 (261)
Q Consensus       182 DrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L  258 (261)
                      |+|+++....++              .....|++.++.........++|+++++++++++++.++|||++|.+.+++
T Consensus        80 d~V~~~~~~~~~--------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~  142 (339)
T cd08249          80 DRVAGFVHGGNP--------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGL  142 (339)
T ss_pred             CEEEEEeccccC--------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccC
Confidence            999987643221              111224555555665577889999999999999999999999999877665

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=99.73  E-value=4.3e-17  Score=144.48  Aligned_cols=137  Identities=21%  Similarity=0.186  Sum_probs=110.2

Q ss_pred             eeEEEEecCCC--CcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         103 CKAAVAWEPKK--PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       103 ~~~~~~~~~g~--~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      |+++++.++++  ++++++.+.|.|+++||+|+|.++|+|++|++...|.++. ..+|.++|||++|+|+++  +++.|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~   78 (325)
T cd05280           1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR   78 (325)
T ss_pred             CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence            67888888775  6999999999999999999999999999999999887643 234678999999999999  567899


Q ss_pred             CCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccC
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRD  257 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~  257 (261)
                      +||+|++....                ......|++.++.......+.++|+++++++++.++++++|||++|....+
T Consensus        79 ~Gd~V~~~~~~----------------~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~  140 (325)
T cd05280          79 EGDEVLVTGYD----------------LGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLED  140 (325)
T ss_pred             CCCEEEEcccc----------------cCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhh
Confidence            99999885310                000112445555555557889999999999999999999999999976543

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.73  E-value=4.9e-17  Score=146.40  Aligned_cols=139  Identities=22%  Similarity=0.190  Sum_probs=108.7

Q ss_pred             eEEEEecCCCCcEEEEeeCCCC---CCCeEEEEEEEEEcChhhHHHHcCCCCCCC-CCcccccceEEEEEEeCCCCC-CC
Q psy7798         104 KAAVAWEPKKPLSLETIQVAPP---KAGEVRIKIVSTAICHTDAYTLDGLDSEGK-FPCVLGHEGSGIVESVGEGVT-SV  178 (261)
Q Consensus       104 ~~~~~~~~g~~l~~~~~~~p~~---~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~-~p~~lG~E~~G~V~~vG~~v~-~~  178 (261)
                      +++++.+++++++++.++.|.|   ++++|+|+|.++|+|++|+....+...... .|.++|+|++|+|+++|++|+ .|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~   81 (352)
T cd08247           2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW   81 (352)
T ss_pred             ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence            5678888888888887776665   899999999999999999988765332111 367899999999999999998 89


Q ss_pred             CCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeec-c----cccccCCCCChhhhccccchHHHHHHHHh
Q psy7798         179 APGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTIS-D----FNMGYSMTGSLERGSKRDNSFQTTHFAVI  253 (261)
Q Consensus       179 ~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~----~~~~~~~~~s~~eaA~lp~~~~TA~~aL~  253 (261)
                      ++||+|+++....+              .   . .+.++.++.++ .    ...++|+++++++++.++++++|||++|.
T Consensus        82 ~~Gd~V~~~~~~~~--------------~---~-~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~  143 (352)
T cd08247          82 KVGDEVCGIYPHPY--------------G---G-QGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILE  143 (352)
T ss_pred             CCCCEEEEeecCCC--------------C---C-CceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHH
Confidence            99999998653211              1   1 23444554444 4    57899999999999999999999999998


Q ss_pred             ccc-Cccc
Q psy7798         254 KRR-DFEK  260 (261)
Q Consensus       254 ~~a-~L~~  260 (261)
                      +.+ ++++
T Consensus       144 ~~~~~~~~  151 (352)
T cd08247         144 DLGQKLGP  151 (352)
T ss_pred             HhhhccCC
Confidence            776 5653

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=99.73  E-value=8.4e-17  Score=142.55  Aligned_cols=137  Identities=22%  Similarity=0.235  Sum_probs=108.8

Q ss_pred             eeEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC---CCCCcccccceEEEEEEeCCCCCC
Q psy7798         103 CKAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE---GKFPCVLGHEGSGIVESVGEGVTS  177 (261)
Q Consensus       103 ~~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~---~~~p~~lG~E~~G~V~~vG~~v~~  177 (261)
                      |+++.+.+++.+  +.+.+.+.|.+.+++|+|+|.++|+|+.|++...|..+.   ...|.++|+|++|+|+++|++++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~   80 (324)
T cd08244           1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP   80 (324)
T ss_pred             CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence            567777765543  667777777789999999999999999999999886542   334678999999999999999999


Q ss_pred             CCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccC
Q psy7798         178 VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRD  257 (261)
Q Consensus       178 ~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~  257 (261)
                      +++||+|+++..                    ...|++..+..+....+.++|++++++++++++..++|| +++...++
T Consensus        81 ~~~Gd~V~~~~~--------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta-~~~~~~~~  139 (324)
T cd08244          81 AWLGRRVVAHTG--------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTA-LGLLDLAT  139 (324)
T ss_pred             CCCCCEEEEccC--------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHH-HHHHHhcC
Confidence            999999988641                    011444455555557788999999999999999999999 56667777


Q ss_pred             ccc
Q psy7798         258 FEK  260 (261)
Q Consensus       258 L~~  260 (261)
                      +++
T Consensus       140 ~~~  142 (324)
T cd08244         140 LTP  142 (324)
T ss_pred             CCC
Confidence            653

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=99.72  E-value=6.7e-17  Score=144.13  Aligned_cols=139  Identities=19%  Similarity=0.118  Sum_probs=112.4

Q ss_pred             eeEEEEecCCCC-----cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCC
Q psy7798         103 CKAAVAWEPKKP-----LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTS  177 (261)
Q Consensus       103 ~~~~~~~~~g~~-----l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~  177 (261)
                      |+++++.++++.     +.+.+.+.|.+.+++|+|++.++|+|+.|++...|.++....|.++|+|++|+|+.+|+++..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~   80 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL   80 (336)
T ss_pred             CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence            467888877753     666777888889999999999999999999998887654445678999999999999999999


Q ss_pred             CCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccC
Q psy7798         178 VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRD  257 (261)
Q Consensus       178 ~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~  257 (261)
                      |++||+|++...                   ....+++.++..+....+.++|+++++++++.+++.++|||++|.+.++
T Consensus        81 ~~~Gd~V~~~~~-------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~  141 (336)
T cd08252          81 FKVGDEVYYAGD-------------------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLG  141 (336)
T ss_pred             CCCCCEEEEcCC-------------------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcC
Confidence            999999987421                   0011445555555557788999999999999999999999999988877


Q ss_pred             ccc
Q psy7798         258 FEK  260 (261)
Q Consensus       258 L~~  260 (261)
                      +++
T Consensus       142 ~~~  144 (336)
T cd08252         142 ISE  144 (336)
T ss_pred             CCC
Confidence            653

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.72  E-value=1e-16  Score=141.71  Aligned_cols=139  Identities=26%  Similarity=0.235  Sum_probs=115.0

Q ss_pred             eeEEEEecCC--CCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCC
Q psy7798         103 CKAAVAWEPK--KPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAP  180 (261)
Q Consensus       103 ~~~~~~~~~g--~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~v  180 (261)
                      |+++++.+++  ..+.+.+.+.|.+.+++|+|+|.++|+|+.|+....|.++....|.++|||++|+|+.+|+++.++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~   80 (325)
T cd08271           1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV   80 (325)
T ss_pred             CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence            6788888888  46999999999999999999999999999999988776543233678999999999999999999999


Q ss_pred             CCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         181 GDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       181 GDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      ||+|+++...                   ...+++.++.......+.++|+++++.+++.++..++|||+++.+.+++++
T Consensus        81 Gd~V~~~~~~-------------------~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~  141 (325)
T cd08271          81 GDRVAYHASL-------------------ARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEA  141 (325)
T ss_pred             CCEEEeccCC-------------------CCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCC
Confidence            9999986410                   011445555555557888999999999999999999999999988777653

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.72  E-value=1.1e-16  Score=142.31  Aligned_cols=135  Identities=18%  Similarity=0.165  Sum_probs=112.4

Q ss_pred             eEEEEecCCC--CcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCCCC
Q psy7798         104 KAAVAWEPKK--PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSVAP  180 (261)
Q Consensus       104 ~~~~~~~~g~--~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~~v  180 (261)
                      +++.+...+.  .+++.+.+.|.|.++||+|+|.++|+|+.|+.+..|.++. ..+|.++|+|++|+|+.+|++|++|++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~   81 (331)
T cd08273           2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV   81 (331)
T ss_pred             eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence            5677776664  3888888999999999999999999999999999887643 245778999999999999999999999


Q ss_pred             CCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         181 GDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       181 GDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      ||+|+++..                      .+++.++.........++|++++++++++++..++|||++|.+.+++++
T Consensus        82 Gd~V~~~~~----------------------~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~  139 (331)
T cd08273          82 GDRVAALTR----------------------VGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLT  139 (331)
T ss_pred             CCEEEEeCC----------------------CcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCC
Confidence            999998641                      1445555555557788999999999999999999999999987776653

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.72  E-value=5.6e-17  Score=139.44  Aligned_cols=127  Identities=30%  Similarity=0.434  Sum_probs=105.9

Q ss_pred             eEEEEEEEEEcChhhHHHHcCCCC-CCCCCcccccceEEEEEEeCCCCCCCCCCCEEEEeeccCCCCCcccccCcccccc
Q psy7798         129 EVRIKIVSTAICHTDAYTLDGLDS-EGKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCT  207 (261)
Q Consensus       129 eVlVkV~a~gln~~Dv~~~~g~~~-~~~~p~~lG~E~~G~V~~vG~~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~  207 (261)
                      ||+|+|.++++|+.|++...|.++ ....|.++|+|++|+|+++|++++.|++||+|++.....|+.|..|..    .|.
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~   76 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP   76 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence            689999999999999999988765 344578899999999999999999999999999988888999999986    443


Q ss_pred             ccc-----cccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCcc
Q psy7798         208 KIR-----TTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFE  259 (261)
Q Consensus       208 ~~~-----~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~  259 (261)
                      ...     ..+.+.++.........++|+++++++++.++..+.|||+++...+.++
T Consensus        77 ~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~  133 (271)
T cd05188          77 GGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLK  133 (271)
T ss_pred             CCCEeccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCC
Confidence            322     1244555555555788999999999999999999999999998777654

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.71  E-value=1.3e-16  Score=140.39  Aligned_cols=141  Identities=26%  Similarity=0.292  Sum_probs=112.8

Q ss_pred             eeEEEEecCCC--CcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         103 CKAAVAWEPKK--PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       103 ~~~~~~~~~g~--~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      |+++++...+.  .+.+.+++.|.+.+++|+|++.++++|+.|++...|.++. ...|.++|||++|+|+++|+++++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~   80 (325)
T cd08253           1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK   80 (325)
T ss_pred             CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence            45666665553  3788888888999999999999999999999998886542 34577899999999999999999999


Q ss_pred             CCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCcc
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFE  259 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~  259 (261)
                      +||+|++...+..                 ...+++.++.........++|++++++++++++..+.|||++|..+++++
T Consensus        81 ~Gd~v~~~~~~~~-----------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~  143 (325)
T cd08253          81 VGDRVWLTNLGWG-----------------RRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAK  143 (325)
T ss_pred             CCCEEEEeccccC-----------------CCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCC
Confidence            9999998752100                 01144445555555778899999999999999999999999998877765


Q ss_pred             c
Q psy7798         260 K  260 (261)
Q Consensus       260 ~  260 (261)
                      +
T Consensus       144 ~  144 (325)
T cd08253         144 A  144 (325)
T ss_pred             C
Confidence            3

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.71  E-value=1.7e-16  Score=139.98  Aligned_cols=141  Identities=21%  Similarity=0.195  Sum_probs=113.2

Q ss_pred             eeEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         103 CKAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       103 ~~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      |+++++.+++.+  +.+.+.+.|.+.+++|+|+|.++++|+.|+....|.++. ...|.++|+|++|+|+.+|+++.+|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (326)
T cd08272           1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR   80 (326)
T ss_pred             CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence            578888877754  788888888889999999999999999999998886541 23467899999999999999999999


Q ss_pred             CCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCcc
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFE  259 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~  259 (261)
                      +||+|+++..+.                 ....|++.++..........+|+++++.+++.++..+.|||++|.+.++++
T Consensus        81 ~Gd~V~~~~~~~-----------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~  143 (326)
T cd08272          81 VGDEVYGCAGGL-----------------GGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQ  143 (326)
T ss_pred             CCCEEEEccCCc-----------------CCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCC
Confidence            999999864210                 001144445555555778899999999999999999999999998887775


Q ss_pred             c
Q psy7798         260 K  260 (261)
Q Consensus       260 ~  260 (261)
                      +
T Consensus       144 ~  144 (326)
T cd08272         144 A  144 (326)
T ss_pred             C
Confidence            3

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=99.71  E-value=1.4e-16  Score=142.82  Aligned_cols=132  Identities=20%  Similarity=0.062  Sum_probs=99.6

Q ss_pred             eeEEEEecCC-CCcEEEEeeC----CCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccce--EEEEEEeCCC
Q psy7798         103 CKAAVAWEPK-KPLSLETIQV----APPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEG--SGIVESVGEG  174 (261)
Q Consensus       103 ~~~~~~~~~g-~~l~~~~~~~----p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~--~G~V~~vG~~  174 (261)
                      ++++....+. +.|++.+.+.    |+|++|||+|||+|+|||+.|++...|..+. ...|.++|+++  .|++..||++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~   87 (338)
T cd08295           8 LKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSG   87 (338)
T ss_pred             EecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecC
Confidence            4444433333 3488888776    7899999999999999999999999885432 24567889754  4566668899


Q ss_pred             CCCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecc--cccccC-CCCChh-hhccccchHHHHHH
Q psy7798         175 VTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISD--FNMGYS-MTGSLE-RGSKRDNSFQTTHF  250 (261)
Q Consensus       175 v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~-~~~s~~-eaA~lp~~~~TA~~  250 (261)
                      +++|++||+|+++                         ++ +++|+.++.  .+.++| ++++++ ++|+++++++|||+
T Consensus        88 v~~~~vGd~V~~~-------------------------g~-~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~  141 (338)
T cd08295          88 NPDFKVGDLVWGF-------------------------TG-WEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYA  141 (338)
T ss_pred             CCCCCCCCEEEec-------------------------CC-ceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHH
Confidence            9999999999863                         22 344444444  567775 678887 89999999999999


Q ss_pred             HHhcccCccc
Q psy7798         251 AVIKRRDFEK  260 (261)
Q Consensus       251 aL~~~a~L~~  260 (261)
                      +|.+.+++++
T Consensus       142 ~l~~~~~~~~  151 (338)
T cd08295         142 GFYEVCKPKK  151 (338)
T ss_pred             HHHHhcCCCC
Confidence            9988887764

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=99.70  E-value=2.4e-16  Score=139.02  Aligned_cols=140  Identities=21%  Similarity=0.243  Sum_probs=109.5

Q ss_pred             eeEEEEecCCC--CcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCC
Q psy7798         103 CKAAVAWEPKK--PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAP  180 (261)
Q Consensus       103 ~~~~~~~~~g~--~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~v  180 (261)
                      |+++.+...+.  .+.+.+.+.|.++++||+|+|.++|+|+.|+....|.++....|.++|+|++|+|+++|.  ..+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~   78 (320)
T cd08243           1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP   78 (320)
T ss_pred             CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence            46677766553  367777777788999999999999999999999988765555578899999999999995  57999


Q ss_pred             CCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         181 GDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       181 GDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      ||+|+++....+              .  ...|++.++.........++|++++++++++++.+++|||++|.+.+++++
T Consensus        79 Gd~V~~~~~~~~--------------~--~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~  142 (320)
T cd08243          79 GQRVATAMGGMG--------------R--TFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQP  142 (320)
T ss_pred             CCEEEEecCCCC--------------C--CCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCC
Confidence            999998642110              0  111344444455557788999999999999999999999999988776653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=99.70  E-value=4.4e-16  Score=136.71  Aligned_cols=135  Identities=26%  Similarity=0.293  Sum_probs=110.8

Q ss_pred             eeEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         103 CKAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       103 ~~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      ||++++.+.+.+  +++.+.+.|.+.+++|+|+|.++|+|+.|++...|.++. ...|.++|+|++|+|+.+|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (323)
T cd05276           1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK   80 (323)
T ss_pred             CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence            578888776543  778788777889999999999999999999998886542 33568899999999999999999999


Q ss_pred             CCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCcc
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFE  259 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~  259 (261)
                      +||+|+++..                      .+++.++.........++|+++++.++++++..+.|||+++.+.++++
T Consensus        81 ~Gd~V~~~~~----------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~  138 (323)
T cd05276          81 VGDRVCALLA----------------------GGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLK  138 (323)
T ss_pred             CCCEEEEecC----------------------CCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCC
Confidence            9999987631                      134444445555778899999999999999999999999998777664

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=99.69  E-value=2.3e-16  Score=140.58  Aligned_cols=115  Identities=14%  Similarity=0.119  Sum_probs=87.9

Q ss_pred             cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCEEEEeeccCCCC
Q psy7798         115 LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNE  194 (261)
Q Consensus       115 l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGDrV~~~~~~~~~~  194 (261)
                      |++.+.+.|.|++|||+|||+|+|+|+.|.   .|.++....|.++|.|++|+|.++|+   +|++||||+++.      
T Consensus        19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~~------   86 (325)
T TIGR02825        19 FELKTVELPPLNNGEVLLEALFLSVDPYMR---VAAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLASP------   86 (325)
T ss_pred             eEEEeccCCCCCCCcEEEEEEEEecCHHHh---cccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEec------
Confidence            888899999999999999999999999654   44433233467999999999999874   699999998742      


Q ss_pred             CcccccCccccccccccccceeeeeeeecccc----cccCCCCChhhh-ccccchHHHHHHHHhcccCccc
Q psy7798         195 CKFCKSSKTNLCTKIRTTQLFLTSNVTISDFN----MGYSMTGSLERG-SKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~s~~ea-A~lp~~~~TA~~aL~~~a~L~~  260 (261)
                                         ++.++.......+    .++|+++++++| ++++++++|||++|.+.+++++
T Consensus        87 -------------------~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~  138 (325)
T TIGR02825        87 -------------------GWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKG  138 (325)
T ss_pred             -------------------CceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCC
Confidence                               0111222222232    344889999998 7899999999999988888764

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=99.68  E-value=5.5e-16  Score=137.83  Aligned_cols=128  Identities=15%  Similarity=0.044  Sum_probs=95.0

Q ss_pred             eeeEEEEecC--CC----CcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCC
Q psy7798         102 ECKAAVAWEP--KK----PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGV  175 (261)
Q Consensus       102 ~~~~~~~~~~--g~----~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v  175 (261)
                      .|+++++.++  ++    .+++.+.+.|.|++|||+|||+++|||+.|.....+  + ...|.++|+|++|+|++   .+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~--~-~~~p~v~G~e~~G~V~~---~~   75 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR--L-NEGDTMIGTQVAKVIES---KN   75 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc--C-CCCCcEecceEEEEEec---CC
Confidence            4778887762  33    278889999999999999999999999987652211  1 23578999999999985   55


Q ss_pred             CCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecc---cccccCCCCC--h---hhhccccchHHH
Q psy7798         176 TSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISD---FNMGYSMTGS--L---ERGSKRDNSFQT  247 (261)
Q Consensus       176 ~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~s--~---~eaA~lp~~~~T  247 (261)
                      ++|++||||+++.                         ++.++......   .+..+|++++  +   .++++++++++|
T Consensus        76 ~~~~~Gd~V~~~~-------------------------~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~t  130 (329)
T cd08294          76 SKFPVGTIVVASF-------------------------GWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLT  130 (329)
T ss_pred             CCCCCCCEEEeeC-------------------------CeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHH
Confidence            7899999998641                         12233333334   6677888887  2   334579999999


Q ss_pred             HHHHHhcccCccc
Q psy7798         248 THFAVIKRRDFEK  260 (261)
Q Consensus       248 A~~aL~~~a~L~~  260 (261)
                      ||++|.+.+++++
T Consensus       131 a~~al~~~~~~~~  143 (329)
T cd08294         131 AYFGLLEICKPKA  143 (329)
T ss_pred             HHHHHHHhcCCCC
Confidence            9999988887764

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=99.68  E-value=9.8e-16  Score=138.27  Aligned_cols=134  Identities=14%  Similarity=0.064  Sum_probs=96.2

Q ss_pred             eeeeEEEEecCC------CCcEEEEe---eCC-CCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCccccc--ceEEEE
Q psy7798         101 IECKAAVAWEPK------KPLSLETI---QVA-PPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGH--EGSGIV  168 (261)
Q Consensus       101 ~~~~~~~~~~~g------~~l~~~~~---~~p-~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~--E~~G~V  168 (261)
                      .+++.+.+....      +.+++.+.   +.| ++++|||+|||.|+|+|+.|.....+..+....|.++|+  |++|+|
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G~v   86 (348)
T PLN03154          7 VENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFGVS   86 (348)
T ss_pred             ccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeEEE
Confidence            345666653321      12666653   444 458999999999999999987654432222235788997  889999


Q ss_pred             EEeCCCCCCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecc-c--c--cccCCCCChh-hhcccc
Q psy7798         169 ESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISD-F--N--MGYSMTGSLE-RGSKRD  242 (261)
Q Consensus       169 ~~vG~~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~--~--~~~~~~~s~~-eaA~lp  242 (261)
                      ..+|++|++|++||+|+++                         +++ +++..++. .  .  ..+|++++++ +||+++
T Consensus        87 ~~vg~~v~~~~~Gd~V~~~-------------------------~~~-aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~  140 (348)
T PLN03154         87 KVVDSDDPNFKPGDLISGI-------------------------TGW-EEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLG  140 (348)
T ss_pred             EEEecCCCCCCCCCEEEec-------------------------CCc-EEEEEEeccccceEEccCcCCCCHHHHHHHcc
Confidence            9999999999999999863                         222 33444443 1  2  3458889997 788999


Q ss_pred             chHHHHHHHHhcccCccc
Q psy7798         243 NSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       243 ~~~~TA~~aL~~~a~L~~  260 (261)
                      ++++|||++|.+.+++++
T Consensus       141 ~~~~TA~~al~~~~~~~~  158 (348)
T PLN03154        141 MAGFTAYAGFYEVCSPKK  158 (348)
T ss_pred             cHHHHHHHHHHHhcCCCC
Confidence            999999999988887764

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=99.68  E-value=7.4e-16  Score=136.75  Aligned_cols=134  Identities=19%  Similarity=0.189  Sum_probs=105.2

Q ss_pred             eEEEEecCCC--CcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCCCC
Q psy7798         104 KAAVAWEPKK--PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSVAP  180 (261)
Q Consensus       104 ~~~~~~~~g~--~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~~v  180 (261)
                      |++++...+.  .+++++.|.|.++++||+|+|.++|+|+.|++...|.++. ...|.++|+|++|+|+.  +++..|++
T Consensus         1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~   78 (323)
T TIGR02823         1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE   78 (323)
T ss_pred             CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence            4566666665  4789999999999999999999999999999999887642 23478899999999988  56788999


Q ss_pred             CCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcc
Q psy7798         181 GDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKR  255 (261)
Q Consensus       181 GDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~  255 (261)
                      ||+|++.....              +.  ...|.+..+.......+.++|++++++++++++..++|||+++...
T Consensus        79 Gd~V~~~~~~~--------------~~--~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~  137 (323)
T TIGR02823        79 GDEVIVTGYGL--------------GV--SHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMAL  137 (323)
T ss_pred             CCEEEEccCCC--------------CC--CCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHh
Confidence            99998764210              00  0114444555555578889999999999999999999999988544

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=99.67  E-value=7.2e-16  Score=136.90  Aligned_cols=135  Identities=13%  Similarity=0.147  Sum_probs=104.5

Q ss_pred             eeEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCC-CCCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         103 CKAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDS-EGKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       103 ~~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~-~~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      |+++++.+++++  +.+++.+.|.|+++||+|++.++|+|++|++...+... ...+|.++|||++|+|+++|  +.+|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~   78 (326)
T cd08289           1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK   78 (326)
T ss_pred             CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence            678888877764  77888999999999999999999999999877653211 12347889999999999954  57899


Q ss_pred             CCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcc
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKR  255 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~  255 (261)
                      +||+|++.....         +       ....|++.++.......+.++|+++++++++.++..++|||++|...
T Consensus        79 ~Gd~V~~~~~~~---------~-------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~  138 (326)
T cd08289          79 PGDEVIVTSYDL---------G-------VSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRL  138 (326)
T ss_pred             CCCEEEEccccc---------C-------CCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHH
Confidence            999998764210         0       00114455555555578889999999999999999999999998643

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.67  E-value=1.7e-15  Score=132.78  Aligned_cols=133  Identities=26%  Similarity=0.279  Sum_probs=107.9

Q ss_pred             EEEEecCCC--CcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCC
Q psy7798         105 AAVAWEPKK--PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGD  182 (261)
Q Consensus       105 ~~~~~~~g~--~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGD  182 (261)
                      ++....++.  .+.+.+.+.+.+++++|+|+|.++|+|+.|++...|.++. .+|.++|+|++|+|+.+|+++.+|++||
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G~   80 (320)
T cd05286           2 AVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVGD   80 (320)
T ss_pred             eEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCCC
Confidence            344444443  3666677777789999999999999999999999887653 4467899999999999999999999999


Q ss_pred             EEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         183 HVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       183 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      +|+++.                      ..+++.++.........++|++++++++++++..++|||++|.+.+++++
T Consensus        81 ~V~~~~----------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~  136 (320)
T cd05286          81 RVAYAG----------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKP  136 (320)
T ss_pred             EEEEec----------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCC
Confidence            998853                      01455555566667788999999999999999999999999988777754

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.66  E-value=1.3e-15  Score=135.10  Aligned_cols=133  Identities=17%  Similarity=0.173  Sum_probs=106.8

Q ss_pred             eeEEEEecCCC--CcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         103 CKAAVAWEPKK--PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       103 ~~~~~~~~~g~--~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      |+++++.++|+  .+++++.+.|+|+++||+|+|.++++|+.|+++..|.++. ..+|.++|+|++|+|++  +++++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~   78 (324)
T cd08288           1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK   78 (324)
T ss_pred             CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence            67888887775  4889999999999999999999999999999998886532 23467889999999998  7788899


Q ss_pred             CCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHh
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVI  253 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~  253 (261)
                      +||+|+++...              .+.  ...+++.++..+....+.++|++++++++++++..++||++++.
T Consensus        79 ~Gd~V~~~~~~--------------~~~--~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~  136 (324)
T cd08288          79 PGDRVVLTGWG--------------VGE--RHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVM  136 (324)
T ss_pred             CCCEEEECCcc--------------CCC--CCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHH
Confidence            99999885310              000  01245555556666788999999999999999999999998875

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.66  E-value=1.3e-15  Score=133.23  Aligned_cols=138  Identities=24%  Similarity=0.246  Sum_probs=110.3

Q ss_pred             eeEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCC---CCCCCcccccceEEEEEEeCCCCCC
Q psy7798         103 CKAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDS---EGKFPCVLGHEGSGIVESVGEGVTS  177 (261)
Q Consensus       103 ~~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~---~~~~p~~lG~E~~G~V~~vG~~v~~  177 (261)
                      |+++.+..++..  +.+.+.+.|.+++++|+|+|.++++|+.|++...|.++   ....|..+|+|++|+|+.+|+++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~   80 (309)
T cd05289           1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG   80 (309)
T ss_pred             CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence            466777666543  56777777788999999999999999999999888653   2334678999999999999999999


Q ss_pred             CCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccC
Q psy7798         178 VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRD  257 (261)
Q Consensus       178 ~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~  257 (261)
                      +++||+|+++...                   ...+++.++..........+|+++++.+++.++..+.|||+++...++
T Consensus        81 ~~~G~~V~~~~~~-------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~  141 (309)
T cd05289          81 FKVGDEVFGMTPF-------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGG  141 (309)
T ss_pred             CCCCCEEEEccCC-------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcC
Confidence            9999999986520                   011455555556667788999999999999999999999999987765


Q ss_pred             cc
Q psy7798         258 FE  259 (261)
Q Consensus       258 L~  259 (261)
                      ++
T Consensus       142 ~~  143 (309)
T cd05289         142 LK  143 (309)
T ss_pred             CC
Confidence            54

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=99.66  E-value=9e-16  Score=135.87  Aligned_cols=124  Identities=25%  Similarity=0.339  Sum_probs=104.1

Q ss_pred             cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCCCCCCEEEEeeccCCC
Q psy7798         115 LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCN  193 (261)
Q Consensus       115 l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~~vGDrV~~~~~~~~~  193 (261)
                      +++.+.+.|.+++++|+|+|.++++|+.|+....|.++. ...|.++|+|++|+|+.+|++|+++++||+|+++..    
T Consensus        14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----   89 (323)
T cd05282          14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG----   89 (323)
T ss_pred             EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence            667788888899999999999999999999998876542 345678999999999999999999999999998641    


Q ss_pred             CCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         194 ECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                                        .|++.++.........++|+++++++++.+++.++|||+++...+++++
T Consensus        90 ------------------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~  138 (323)
T cd05282          90 ------------------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPP  138 (323)
T ss_pred             ------------------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCC
Confidence                              1445555555557788999999999999999999999999988776653

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.65  E-value=2.5e-15  Score=132.48  Aligned_cols=140  Identities=24%  Similarity=0.252  Sum_probs=109.7

Q ss_pred             eeEEEEecCCC--CcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         103 CKAAVAWEPKK--PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       103 ~~~~~~~~~g~--~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      |+++.+...+.  .+.+.+.+.|.+++++|+|+|.++++|+.|+....|.++. ...|.++|+|++|+|+.+|+++.+|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (328)
T cd08268           1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA   80 (328)
T ss_pred             CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence            45666665553  3777777777889999999999999999999988776542 23467899999999999999999999


Q ss_pred             CCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCcc
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFE  259 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~  259 (261)
                      +||+|+++.....                 ...+.+.++..........+|++++++++++++..+.|||+++...++++
T Consensus        81 ~Gd~V~~~~~~~~-----------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~  143 (328)
T cd08268          81 VGDRVSVIPAADL-----------------GQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLR  143 (328)
T ss_pred             CCCEEEecccccc-----------------CCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCC
Confidence            9999998642110                 11133444555555778899999999999999999999999998777664

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.63  E-value=6.1e-15  Score=129.86  Aligned_cols=136  Identities=26%  Similarity=0.276  Sum_probs=107.9

Q ss_pred             eeEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         103 CKAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       103 ~~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      |+++.....+.+  +.+.+.+.+.+++++|+|+|.++++|+.|++...|.++. ..+|.++|+|++|+|+.+|+++.+|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (325)
T TIGR02824         1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK   80 (325)
T ss_pred             CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence            456666665544  667777666789999999999999999999998876542 23467899999999999999999999


Q ss_pred             CCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCcc
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFE  259 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~  259 (261)
                      +||+|+++..                      .+++.++.........++|+++++.++++++..++|||+++.+.++++
T Consensus        81 ~Gd~V~~~~~----------------------~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~  138 (325)
T TIGR02824        81 VGDRVCALVA----------------------GGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLK  138 (325)
T ss_pred             CCCEEEEccC----------------------CCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence            9999988531                      023334444444677889999999999999999999999988887775


Q ss_pred             c
Q psy7798         260 K  260 (261)
Q Consensus       260 ~  260 (261)
                      +
T Consensus       139 ~  139 (325)
T TIGR02824       139 A  139 (325)
T ss_pred             C
Confidence            3

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=99.63  E-value=6.8e-16  Score=135.09  Aligned_cols=97  Identities=19%  Similarity=0.197  Sum_probs=82.7

Q ss_pred             ccccceEEEEEEeCCCCC------CCCCCCEEEEeeccCCCCCcccccCcccccccccc-----------ccceeeeeee
Q psy7798         159 VLGHEGSGIVESVGEGVT------SVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT-----------TQLFLTSNVT  221 (261)
Q Consensus       159 ~lG~E~~G~V~~vG~~v~------~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~g~~~~~~~  221 (261)
                      ++|||++|+|+++|++|+      +|++||||+..+..+|+.|.+|..+..+.|.....           ..|.+++++.
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            479999999999999999      89999999988878899999999999999986432           1255566666


Q ss_pred             ec-c-cccccCCCCChhhhccccchHHHHHHHHhcc
Q psy7798         222 IS-D-FNMGYSMTGSLERGSKRDNSFQTTHFAVIKR  255 (261)
Q Consensus       222 ~~-~-~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~  255 (261)
                      ++ . ...++|+++++++++.+++++.|||++|...
T Consensus        81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~  116 (280)
T TIGR03366        81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAA  116 (280)
T ss_pred             ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhc
Confidence            55 4 4889999999999999999999999998543

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.63  E-value=7.1e-15  Score=130.51  Aligned_cols=133  Identities=25%  Similarity=0.296  Sum_probs=106.2

Q ss_pred             EEEecCCC--CcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCCCCCC
Q psy7798         106 AVAWEPKK--PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSVAPGD  182 (261)
Q Consensus       106 ~~~~~~g~--~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~~vGD  182 (261)
                      +.....+.  .+.+.+.+.|.|++++|+|++.++|+|+.|++...|.++. ...|.++|+|++|+|+.+|+++.+|++||
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~   82 (337)
T cd08275           3 VVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGD   82 (337)
T ss_pred             EEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCCCC
Confidence            44444442  3777777777889999999999999999999998886642 23467899999999999999999999999


Q ss_pred             EEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         183 HVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       183 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      +|+++..                      .+.+.++..........+|+++++++++.++..++|||+++...+++++
T Consensus        83 ~V~~~~~----------------------~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~  138 (337)
T cd08275          83 RVMGLTR----------------------FGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRP  138 (337)
T ss_pred             EEEEecC----------------------CCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCC
Confidence            9998641                      0334444444456788999999999999999999999999988777653

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.62  E-value=4.5e-15  Score=130.82  Aligned_cols=125  Identities=22%  Similarity=0.183  Sum_probs=102.4

Q ss_pred             EEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCC---CCCCCcccccceEEEEEEeCCCCCCCCCCCEEEEeeccCC
Q psy7798         116 SLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDS---EGKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQC  192 (261)
Q Consensus       116 ~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~---~~~~p~~lG~E~~G~V~~vG~~v~~~~vGDrV~~~~~~~~  192 (261)
                      ++.+.+.|+|+++||+|++.++|+|+.|++...|.++   ....|..+|+|++|+|+++|++++++++||+|+++...  
T Consensus        15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~--   92 (319)
T cd08267          15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP--   92 (319)
T ss_pred             ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence            6778888899999999999999999999999888653   12345689999999999999999999999999886421  


Q ss_pred             CCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCcc
Q psy7798         193 NECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFE  259 (261)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~  259 (261)
                                       ...+++.++.........++|+++++++++.++..+.|||+++...++++
T Consensus        93 -----------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~  142 (319)
T cd08267          93 -----------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVK  142 (319)
T ss_pred             -----------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCC
Confidence                             01144445555555778899999999999999999999999998777664

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08251 polyketide_synthase polyketide synthase

Probab=99.60  E-value=8.5e-15  Score=127.83  Aligned_cols=118  Identities=31%  Similarity=0.331  Sum_probs=96.7

Q ss_pred             CCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCCCCCCEEEEeeccCCCCCccccc
Q psy7798         122 VAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKS  200 (261)
Q Consensus       122 ~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~~vGDrV~~~~~~~~~~~~~~~~  200 (261)
                      .|.+.+++|+|++.++++|+.|++...|.++. ..+|.++|+|++|+|+++|+++++|++||+|+++...          
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~----------   71 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE----------   71 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC----------
Confidence            47789999999999999999999999887643 3457789999999999999999999999999886421          


Q ss_pred             CccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         201 SKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       201 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                                ..|++.++.........++|++++++++++++..++|||++| +.+++++
T Consensus        72 ----------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~  120 (303)
T cd08251          72 ----------SMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAK  120 (303)
T ss_pred             ----------CCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCC
Confidence                      113344444444467889999999999999999999999998 4676654

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=99.60  E-value=8.9e-15  Score=128.89  Aligned_cols=120  Identities=22%  Similarity=0.254  Sum_probs=96.2

Q ss_pred             CcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHH-cCCCCC--CCCCcccccceEEEEEEeCCCCCCCCCCCEEEEeecc
Q psy7798         114 PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTL-DGLDSE--GKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIP  190 (261)
Q Consensus       114 ~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~-~g~~~~--~~~p~~lG~E~~G~V~~vG~~v~~~~vGDrV~~~~~~  190 (261)
                      .+++.+++.|.+.++||+|+|.++|+|+.|++.. .|..+.  ...|.++|+|++|+|+++|++++++++||+|+++.. 
T Consensus         6 ~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-   84 (312)
T cd08269           6 RFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLSG-   84 (312)
T ss_pred             eeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEecC-
Confidence            3888899999999999999999999999999988 776432  223678999999999999999999999999998641 


Q ss_pred             CCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhcccc-chHHHHHHHHhcccCccc
Q psy7798         191 QCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRD-NSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp-~~~~TA~~aL~~~a~L~~  260 (261)
                                            +++.++.........++|+++   .+++++ .+++|||+++. .+++++
T Consensus        85 ----------------------g~~~~~~~v~~~~~~~lP~~~---~~~~~~~~~~~~a~~~~~-~~~~~~  129 (312)
T cd08269          85 ----------------------GAFAEYDLADADHAVPLPSLL---DGQAFPGEPLGCALNVFR-RGWIRA  129 (312)
T ss_pred             ----------------------CcceeeEEEchhheEECCCch---hhhHHhhhhHHHHHHHHH-hcCCCC
Confidence                                  445555555557788999888   234455 88999999985 777654

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.57  E-value=6.1e-14  Score=123.23  Aligned_cols=134  Identities=29%  Similarity=0.373  Sum_probs=105.4

Q ss_pred             eeEEEEecCCC--CcEEEEeeCCCCC-CCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCC
Q psy7798         103 CKAAVAWEPKK--PLSLETIQVAPPK-AGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSV  178 (261)
Q Consensus       103 ~~~~~~~~~g~--~l~~~~~~~p~~~-~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~  178 (261)
                      |+++++...+.  .+.+.+.+ |.+. +++|+|++.++++|+.|++...|.+.. ...|.++|+|++|+|+.+|+++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~   79 (323)
T cd08241           1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF   79 (323)
T ss_pred             CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence            46777765443  36676766 6666 499999999999999999998886642 2335688999999999999999999


Q ss_pred             CCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCc
Q psy7798         179 APGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDF  258 (261)
Q Consensus       179 ~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L  258 (261)
                      ++||+|+++..                      .+++.++.........++|+++++.++++++..+.+||+++...+++
T Consensus        80 ~~G~~V~~~~~----------------------~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~  137 (323)
T cd08241          80 KVGDRVVALTG----------------------QGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARL  137 (323)
T ss_pred             CCCCEEEEecC----------------------CceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCC
Confidence            99999998641                      13344444455567888999999999999999999999999777766


Q ss_pred             c
Q psy7798         259 E  259 (261)
Q Consensus       259 ~  259 (261)
                      +
T Consensus       138 ~  138 (323)
T cd08241         138 Q  138 (323)
T ss_pred             C
Confidence            4

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.53  E-value=1.7e-13  Score=121.83  Aligned_cols=120  Identities=13%  Similarity=-0.007  Sum_probs=92.0

Q ss_pred             CcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCC---CCCCCcccccceEEEEEEeCCCCCCCCCCCEEEEeecc
Q psy7798         114 PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDS---EGKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIP  190 (261)
Q Consensus       114 ~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~---~~~~p~~lG~E~~G~V~~vG~~v~~~~vGDrV~~~~~~  190 (261)
                      .+++.+.+.|.+++++|+|||.++|+|+.|.....+...   ....+.++|+|++|+|+++|++  +|++||||+++   
T Consensus        19 ~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~~---   93 (329)
T cd05288          19 DFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSGF---   93 (329)
T ss_pred             ceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEecc---
Confidence            388899999999999999999999999987655544311   1112467899999999999964  79999999874   


Q ss_pred             CCCCCcccccCccccccccccccceeeeeeeec-ccccccCCCCC--hhhhcc-ccchHHHHHHHHhcccCccc
Q psy7798         191 QCNECKFCKSSKTNLCTKIRTTQLFLTSNVTIS-DFNMGYSMTGS--LERGSK-RDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~s--~~eaA~-lp~~~~TA~~aL~~~a~L~~  260 (261)
                                            +++.++..+.. ..+.++|++++  +.++++ ++.++.|||++|.+.+++++
T Consensus        94 ----------------------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~  145 (329)
T cd05288          94 ----------------------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKP  145 (329)
T ss_pred             ----------------------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCC
Confidence                                  12344444445 67788998884  666666 99999999999987776653

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.51  E-value=1.2e-13  Score=119.35  Aligned_cols=108  Identities=26%  Similarity=0.305  Sum_probs=90.8

Q ss_pred             CeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCEEEEeeccCCCCCcccccCcccccc
Q psy7798         128 GEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCT  207 (261)
Q Consensus       128 ~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~  207 (261)
                      +||+|+|.++|+|+.|++...|.++  ..|.++|+|++|+|+++|+++++|++||+|+++..                  
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~~--~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~------------------   60 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLLP--GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLAP------------------   60 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCCC--CCCCccceeeeEEEEeecCCccCCCCCCEEEEEec------------------
Confidence            5899999999999999999988653  34678999999999999999999999999988641                  


Q ss_pred             ccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         208 KIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       208 ~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                           +++..+..+......++|+++++.+++.++.++.|||+++.+.+++++
T Consensus        61 -----g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~  108 (293)
T cd05195          61 -----GAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQK  108 (293)
T ss_pred             -----CcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCC
Confidence                 334444455557788999999999999999999999999988777653

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>KOG1198|consensus

Probab=99.48  E-value=5.3e-13  Score=120.05  Aligned_cols=119  Identities=29%  Similarity=0.361  Sum_probs=87.2

Q ss_pred             cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCC----CCCcccccceEEE---EEEeC-CCCCCCCCCCEEEE
Q psy7798         115 LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEG----KFPCVLGHEGSGI---VESVG-EGVTSVAPGDHVIP  186 (261)
Q Consensus       115 l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~----~~p~~lG~E~~G~---V~~vG-~~v~~~~vGDrV~~  186 (261)
                      +...+.+.|.|.+++++|++.++++|+.|+++..|.+...    .+|.+++.+++|+   +..+| ..+..+..||++..
T Consensus        20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~   99 (347)
T KOG1198|consen   20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA   99 (347)
T ss_pred             EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence            4456788999999999999999999999999999987643    3554444444443   33334 23344555555544


Q ss_pred             eeccCCCCCcccccCccccccccccccceeeeeeee-cccccccCCCCChhhhccccchHHHHHHHHhccc
Q psy7798         187 LYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTI-SDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRR  256 (261)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a  256 (261)
                      ...                       .+.+++|+++ .....++|++++|++||++|.+++|||.+|+..+
T Consensus       100 ~~~-----------------------~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~  147 (347)
T KOG1198|consen  100 FLS-----------------------SGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLA  147 (347)
T ss_pred             ccC-----------------------CCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhcc
Confidence            332                       4445555555 5778899999999999999999999999999988

>smart00829 PKS_ER Enoylreductase

Probab=99.42  E-value=9.5e-13  Score=113.62  Aligned_cols=103  Identities=26%  Similarity=0.307  Sum_probs=85.9

Q ss_pred             EEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCEEEEeeccCCCCCcccccCccccccccc
Q psy7798         131 RIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIR  210 (261)
Q Consensus       131 lVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (261)
                      +|||.++++|+.|++...|.++.   |.++|+|++|+|+.+|+++++|++||+|+++..                     
T Consensus         1 ~i~v~~~~i~~~d~~~~~g~~~~---~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~---------------------   56 (288)
T smart00829        1 EVEVRAAGLNFRDVLIALGLLPG---EAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAP---------------------   56 (288)
T ss_pred             CeeEEEEecCHHHHHHhcCCCCC---CCCCCceeEEEEEeeCCCCcCCCCCCEEEEEcC---------------------
Confidence            38999999999999999887642   468999999999999999999999999998631                     


Q ss_pred             cccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCcc
Q psy7798         211 TTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFE  259 (261)
Q Consensus       211 ~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~  259 (261)
                        |++..+..........+|+++++++++++++.+.|||+++.+.+.++
T Consensus        57 --g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~  103 (288)
T smart00829       57 --GSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLR  103 (288)
T ss_pred             --CceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCC
Confidence              33444444444678899999999999999999999999997766654

Enoylreductase in Polyketide synthases.

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=98.93  E-value=2.7e-09  Score=92.63  Aligned_cols=84  Identities=23%  Similarity=0.177  Sum_probs=66.8

Q ss_pred             CCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccc
Q psy7798         149 GLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMG  228 (261)
Q Consensus       149 g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  228 (261)
                      |.+| ..+|.++|+|++|+|+++|+++++|++||+|+++.                         .+.++..+....+..
T Consensus        14 ~~~~-~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------------------------~~~~~~~v~~~~~~~   67 (277)
T cd08255          14 GTEK-LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCFG-------------------------PHAERVVVPANLLVP   67 (277)
T ss_pred             cCcc-CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC-------------------------CcceEEEcCHHHeeE
Confidence            4444 34789999999999999999999999999998853                         133444444467788


Q ss_pred             cCCCCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         229 YSMTGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       229 ~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      +|+++++++++.+ ..++|||+++. .+++++
T Consensus        68 ip~~l~~~~aa~~-~~~~ta~~~~~-~~~~~~   97 (277)
T cd08255          68 LPDGLPPERAALT-ALAATALNGVR-DAEPRL   97 (277)
T ss_pred             CcCCCCHHHhHHH-HHHHHHHHHHH-hcCCCC
Confidence            9999999999998 88999999984 677653

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=98.90  E-value=1.1e-08  Score=88.52  Aligned_cols=122  Identities=13%  Similarity=0.042  Sum_probs=84.3

Q ss_pred             CCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeC--CCCCCCCCCCEEEEeecc
Q psy7798         113 KPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVG--EGVTSVAPGDHVIPLYIP  190 (261)
Q Consensus       113 ~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG--~~v~~~~vGDrV~~~~~~  190 (261)
                      +++++++.+.|.|++||||||..+.++++ .....+...+....|..+|-..+|-++...  +...+|++||.|.+..  
T Consensus        25 d~F~lee~~vp~p~~GqvLl~~~ylS~DP-ymRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~~--  101 (340)
T COG2130          25 DDFRLEEVDVPEPGEGQVLLRTLYLSLDP-YMRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGVS--  101 (340)
T ss_pred             CCceeEeccCCCCCcCceEEEEEEeccCH-HHeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEecc--
Confidence            34889999999999999999999999999 344344444444567888888877655543  5678899999998854  


Q ss_pred             CCCCCcccccCccccccccccccceeeeeeeecccccccCCCCC--hhhhccccchHHHHHHHHhcccCccc
Q psy7798         191 QCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGS--LERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s--~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                                             |+..+.+.......++.++..  ....-.+.....|||++|.++++.|.
T Consensus       102 -----------------------GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~  150 (340)
T COG2130         102 -----------------------GWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKA  150 (340)
T ss_pred             -----------------------cceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCC
Confidence                                   222333333343344442221  12234567788999999999998874

>KOG1202|consensus

Probab=98.85  E-value=2.8e-09  Score=105.08  Aligned_cols=116  Identities=22%  Similarity=0.269  Sum_probs=90.2

Q ss_pred             CCcEEEEeeCC---CCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCC-------cccccceEEEEEEeCCCCCCCCCCC
Q psy7798         113 KPLSLETIQVA---PPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFP-------CVLGHEGSGIVESVGEGVTSVAPGD  182 (261)
Q Consensus       113 ~~l~~~~~~~p---~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p-------~~lG~E~~G~V~~vG~~v~~~~vGD  182 (261)
                      ..|+|.+.+..   +..++.=+..|-++.|||+|++.+.|.++....|       ..+|.|++|+-          +-|.
T Consensus      1427 sSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd----------~~Gr 1496 (2376)
T KOG1202|consen 1427 SSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRD----------ASGR 1496 (2376)
T ss_pred             cceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeecccc----------CCCc
Confidence            34788777654   3466777899999999999999999987654333       57899999853          4588


Q ss_pred             EEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         183 HVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       183 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      ||+++.+.                      .+.++..+...+..-.+|.+.+++||+++|++|.||||||+.++++++
T Consensus      1497 RvM~mvpA----------------------ksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkk 1552 (2376)
T KOG1202|consen 1497 RVMGMVPA----------------------KSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKK 1552 (2376)
T ss_pred             EEEEeeeh----------------------hhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccC
Confidence            99987631                      234444444456667788889999999999999999999999999876

>KOG1196|consensus

Probab=96.40  E-value=0.043  Score=48.15  Aligned_cols=111  Identities=16%  Similarity=0.014  Sum_probs=66.4

Q ss_pred             CCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCC--CCCccccc----ceEEEEEEeCCCCCCCCCCCEEEEeeccCCCCC
Q psy7798         122 VAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEG--KFPCVLGH----EGSGIVESVGEGVTSVAPGDHVIPLYIPQCNEC  195 (261)
Q Consensus       122 ~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~--~~p~~lG~----E~~G~V~~vG~~v~~~~vGDrV~~~~~~~~~~~  195 (261)
                      ..++++++|+||..+-+..|.- ..+++.....  ..|..+|-    .++|+|++.  +-+++++||.|.+..  ++.  
T Consensus        32 ~~~~~s~~vlvknlYLS~DPym-R~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~g~~--gWe--  104 (343)
T KOG1196|consen   32 RVPLGSGEVLVKNLYLSCDPYM-RIRMGKPDPSDYAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVWGIV--GWE--  104 (343)
T ss_pred             cCCCCCccEEeEeeeecCCHHH-HhhccCCCcccccCcccCCcEecCCceEEEEec--CCCCCCcCceEEEec--cce--
Confidence            4567899999999999987753 3344432211  12233332    678889884  568899999998764  121  


Q ss_pred             cccccCccccccccccccceeeeeeeecc--cccccC--CCCChhhh-ccccchHHHHHHHHhcccCccc
Q psy7798         196 KFCKSSKTNLCTKIRTTQLFLTSNVTISD--FNMGYS--MTGSLERG-SKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~--~~~s~~ea-A~lp~~~~TA~~aL~~~a~L~~  260 (261)
                                           ++.+..+.  ..++++  .++.+.-+ ..+....+|||..+++++..++
T Consensus       105 ---------------------eysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~  153 (343)
T KOG1196|consen  105 ---------------------EYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKK  153 (343)
T ss_pred             ---------------------EEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCC
Confidence                                 11111111  122222  33333332 2466788999999998877654

>PTZ00414 10 kDa heat shock protein; Provisional

Probab=86.10  E-value=0.89  Score=33.45  Aligned_cols=23  Identities=30%  Similarity=0.455  Sum_probs=19.2

Q ss_pred             eEEEEEEeCCCCC----CCCCCCEEEE
Q psy7798         164 GSGIVESVGEGVT----SVAPGDHVIP  186 (261)
Q Consensus       164 ~~G~V~~vG~~v~----~~~vGDrV~~  186 (261)
                      ..|+|++||++..    .+|+||+|+.
T Consensus        45 ~~g~VvAVG~G~~~~~~~Vk~GD~Vl~   71 (100)
T PTZ00414         45 NEGTVVAVAAATKDWTPTVKVGDTVLL   71 (100)
T ss_pred             ceeEEEEECCCCccccceecCCCEEEE
Confidence            3699999999854    4999999985

>cd00320 cpn10 Chaperonin 10 Kd subunit (cpn10 or GroES); Cpn10 cooperates with chaperonin 60 (cpn60 or GroEL), an ATPase, to assist the folding and assembly of proteins and is found in eubacterial cytosol, as well as in the matrix of mitochondria and chloroplasts

Probab=86.02  E-value=0.88  Score=33.02  Aligned_cols=54  Identities=28%  Similarity=0.346  Sum_probs=32.6

Q ss_pred             CCCCeEEEEEEEEEcChhhHHHHcCCC-CCCCCCcccccceEEEEEEeCCCC---------CCCCCCCEEEEe
Q psy7798         125 PKAGEVRIKIVSTAICHTDAYTLDGLD-SEGKFPCVLGHEGSGIVESVGEGV---------TSVAPGDHVIPL  187 (261)
Q Consensus       125 ~~~~eVlVkV~a~gln~~Dv~~~~g~~-~~~~~p~~lG~E~~G~V~~vG~~v---------~~~~vGDrV~~~  187 (261)
                      |-.|-|+|+....     +-.+..|.+ |....    .--..|+|++||++.         ..+++||+|+..
T Consensus         4 Pl~DrVLV~~~~~-----e~~T~~GI~Lp~~~~----~k~~~g~VvAVG~g~~~~~g~~~~~~vk~GD~Vl~~   67 (93)
T cd00320           4 PLGDRVLVKRIEA-----EEKTKGGIILPDSAK----EKPQEGKVVAVGPGRRNENGERVPLSVKVGDKVLFP   67 (93)
T ss_pred             ecCCEEEEEEccc-----cceecceEEeCCCcC----CCceEEEEEEECCCeECCCCCCccccccCCCEEEEC
Confidence            3346788886642     222333432 22110    223689999999973         359999999753

It forms heptameric rings with a dome-like structure, forming a lid to the large cavity of the tetradecameric cpn60 cylinder and thereby tightly regulating release and binding of proteins to the cpn60 surface.

>PRK00364 groES co-chaperonin GroES; Reviewed

Probab=84.37  E-value=0.97  Score=32.95  Aligned_cols=24  Identities=38%  Similarity=0.434  Sum_probs=19.7

Q ss_pred             eEEEEEEeCCCCC---------CCCCCCEEEEe
Q psy7798         164 GSGIVESVGEGVT---------SVAPGDHVIPL  187 (261)
Q Consensus       164 ~~G~V~~vG~~v~---------~~~vGDrV~~~  187 (261)
                      ..|+|++||++..         .+++||+|+..
T Consensus        36 ~~G~VvaVG~G~~~~~G~~~~~~vk~GD~Vlf~   68 (95)
T PRK00364         36 QEGEVVAVGPGRRLDNGERVPLDVKVGDKVLFG   68 (95)
T ss_pred             ceEEEEEECCCeECCCCCEeecccCCCCEEEEc
Confidence            5899999999652         49999999853

>PRK14533 groES co-chaperonin GroES; Provisional

Probab=80.36  E-value=2.1  Score=30.92  Aligned_cols=24  Identities=29%  Similarity=0.220  Sum_probs=19.2

Q ss_pred             eEEEEEEeCCCCC----CCCCCCEEEEe
Q psy7798         164 GSGIVESVGEGVT----SVAPGDHVIPL  187 (261)
Q Consensus       164 ~~G~V~~vG~~v~----~~~vGDrV~~~  187 (261)
                      ..|+|++||++..    .+++||+|+..
T Consensus        36 ~~G~VvavG~g~~~~~~~Vk~GD~Vl~~   63 (91)
T PRK14533         36 MKAEVVAVGKLDDEEDFDIKVGDKVIFS   63 (91)
T ss_pred             ceEEEEEECCCCccccccccCCCEEEEc
Confidence            5799999997642    49999999753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	261
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		6e-39
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		1e-38
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		1e-38
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		2e-38
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		2e-38
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		6e-37
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		5e-28
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		6e-28
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		2e-26
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		3e-25
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		3e-25
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		3e-25
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		2e-24
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		3e-24
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		3e-24
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		4e-24
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		4e-24
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		5e-24
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		8e-24
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		8e-24
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		2e-23
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		2e-23
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		2e-23
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		2e-23
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		2e-23
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		2e-23
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		2e-23
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		2e-23
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		2e-23
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		4e-23
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		7e-23
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		1e-07
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		1e-07
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		3e-07
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		6e-07
1uuf_A	369	Crystal Structure Of A Zinc-Type Alcohol Dehydrogen		7e-07
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		2e-06
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		2e-06
4ilk_A	359	Crystal Structure Of Short Chain Alcohol Dehydrogen		2e-06
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		5e-06
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		7e-06
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		2e-05
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		2e-05
1jvb_A	347	Alcohol Dehydrogenase From The Archaeon Sulfolobus		2e-05
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		2e-05
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		1e-04
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		3e-04
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		3e-04
3two_A	348	The Crystal Structure Of Cad From Helicobacter Pylo		4e-04
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		7e-04

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score =  157 bits (397), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 70/112 (62%), Positives = 79/112 (70%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           QVI CKAAVAWEP KPL +E +QVAPP+AGEVR+K++ TA+CHTDAYT  G D EG FPC
Sbjct: 23  QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKDPEGLFPC 82
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIR 210
           VLGH                 PGDHVIP Y  +C ECKFCKS KTNLC K+R
Sbjct: 83  VLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR 134

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 73/115 (63%), Positives = 82/115 (71%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAVAWE  KPLS+E I+VAPPKA EVRIKI++TA+CHTDAYTL G D EG FP 
Sbjct: 3   EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 62
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           +LGH                  GD VIPLYIPQC ECKFC + KTNLC KIR TQ
Sbjct: 63  ILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQ 117

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 73/115 (63%), Positives = 82/115 (71%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAVAWE  KPLS+E I+VAPPKA EVRIKI++TA+CHTDAYTL G D EG FP 
Sbjct: 4   EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 63
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           +LGH                  GD VIPLYIPQC ECKFC + KTNLC KIR TQ
Sbjct: 64  ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQ 118

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score =  155 bits (393), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 73/115 (63%), Positives = 82/115 (71%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAVAWE  KPLS+E I+VAPPKA EVRIKI++TA+CHTDAYTL G D EG FP 
Sbjct: 3   EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 62
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           +LGH                  GD VIPLYIPQC ECKFC + KTNLC KIR TQ
Sbjct: 63  ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQ 117

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score =  155 bits (393), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 73/115 (63%), Positives = 82/115 (71%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAVAWE  KPLS+E I+VAPPKA EVRIKI++TA+CHTDAYTL G D EG FP 
Sbjct: 4   EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 63
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           +LGH                  GD VIPLYIPQC ECKFC + KTNLC KIR TQ
Sbjct: 64  ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQ 118

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score =  150 bits (380), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 69/113 (61%), Positives = 79/113 (69%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           QVI CKAAVA+EP KPL +E +QVAPP+AGEVRIKI+ TA+CHTDAYT  G D EG FPC
Sbjct: 5   QVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPC 64
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT 211
           +LGH                  GDHVIP Y  +C ECKFCKS KTNLC K+R+
Sbjct: 65  ILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRS 117

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score =  121 bits (303), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 59/115 (51%), Positives = 72/115 (62%), Gaps = 1/115 (0%)
Query: 94  MISLPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE 153
           M +  + I CKAAVAWEP KPLSLETI VAPPKA EVRIKI+++ IC +D+  L  +   
Sbjct: 1   MCTAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS 60
Query: 154 GKFPCVLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
            KFP +LGH                 PGD VIPL++PQC  C+ CKSS +N C K
Sbjct: 61  -KFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEK 114

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score =  120 bits (302), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 71/111 (63%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAA+AWE  KPL +E ++VAPPKA EVRI+I++T++CHTDA  +D       FP 
Sbjct: 7   KVIKCKAAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEGLAFPV 66
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKI 209
           ++GH                 PGD VIPLY P C +CKFC S  TNLC KI
Sbjct: 67  IVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKI 117

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 73/114 (64%), Gaps = 2/114 (1%)
Query: 96  SLPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTL-DGLDSEG 154
           ++ +VI+CKAAVAWE  KPL +E I+V  P A E+RIKI++T +CHTD Y L +G   +G
Sbjct: 2   TVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDG 61
Query: 155 KFPCVLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
            FP VLGH                 PG+ VIPL+I QC EC+FC+S KTN C K
Sbjct: 62  -FPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVK 114

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAV WE K+P S+E I+VAPPK  EVRIKI++T IC TD + + G     KFP 
Sbjct: 5   KVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTMVS-KFPV 63
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
           ++GH                 PGD VIPL++PQC EC  C++   NLC +
Sbjct: 64  IVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIR 113

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAV WE K+P S+E I+VAPPK  EVRIKI++T IC TD + + G     KFP 
Sbjct: 5   KVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTMVS-KFPV 63
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
           ++GH                 PGD VIPL++PQC EC  C++   NLC +
Sbjct: 64  IVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIR 113

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  111 bits (278), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 52/110 (47%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAV WE KKP S+E ++VAPPKA EVRIK+V+  ICHTD + + G +     P 
Sbjct: 5   KVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVSG-NLVTPLPV 63
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
           +LGH                 PGD VIPL+ PQC +C+ CK+ ++N C K
Sbjct: 64  ILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLK 113

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 52/112 (46%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAA+AW+   PL +E I+V+PPKA EVRI++++T +CHTD    D    +  FP 
Sbjct: 5   KVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCHTDINATD-PKKKALFPV 63
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIR 210
           VLGH                 PGD VIP + PQC  CK C S  TNLC K+R
Sbjct: 64  VLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLR 115

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 51/110 (46%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAV WE KKP S+E ++VAPPKA EVRIK+V+  IC TD + + G +     P 
Sbjct: 5   KVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSG-NLVTPLPV 63
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
           +LGH                 PGD VIPL+ PQC +C+ CK+ ++N C K
Sbjct: 64  ILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLK 113

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 52/110 (47%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAV WE KKP S+E ++VAPPKA EVRIK+V+  IC TD + + G       P 
Sbjct: 5   KVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTMVT-PLPV 63
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
           +LGH                 PGD VIPL IPQC +C+ CK+ ++N C K
Sbjct: 64  ILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLK 113

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 51/110 (46%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAV WE KKP S+E ++VAPPKA EVRIK+V+  IC TD + + G +     P 
Sbjct: 5   KVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSG-NLVTPLPV 63
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
           +LGH                 PGD VIPL+ PQC +C+ CK+ ++N C K
Sbjct: 64  ILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLK 113

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 51/110 (46%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAV WE KKP S+E ++VAPPKA EVRIK+V+  IC TD + + G +     P 
Sbjct: 5   KVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICGTDDHVVSG-NLVTPLPV 63
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
           +LGH                 PGD VIPL+ PQC +C+ CK+ ++N C K
Sbjct: 64  ILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLK 113

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score =  107 bits (268), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAV WE KKP S+E ++VAPPKA EVRIK+V+  IC +D + + G +     P 
Sbjct: 5   KVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVSG-NLVTPLPV 63
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
           +LGH                 PGD VIPL+ PQC +C+ CK+ ++N C K
Sbjct: 64  ILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLK 113

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  107 bits (266), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 51/110 (46%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAV WE KKP S+E ++VAPPKA EVRIK+V+  IC +D + + G       P 
Sbjct: 5   KVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSG-TLVAPLPV 63
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
           + GH                 PGD VIPL+IPQC +C  CK  + NLC K
Sbjct: 64  IAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLK 113

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  107 bits (266), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 51/110 (46%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAV WE KKP S+E ++VAPPKA EVRIK+V+  IC +D + + G       P 
Sbjct: 5   KVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSG-TLVAPLPV 63
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
           + GH                 PGD VIPL+IPQC +C  CK  + NLC K
Sbjct: 64  IAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLK 113

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAV WE KKP S+E ++VAPPKA EVRIK+V+T IC +D + + G       P 
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT-PLPV 63
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
           + GH                 PGD VIPL+ PQC +C+ CK  + N C K
Sbjct: 64  IAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLK 113

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAV WE KKP S+E ++VAPPKA EVRIK+V+T IC +D + + G       P 
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT-PLPV 63
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
           + GH                 PGD VIPL+ PQC +C+ CK  + N C K
Sbjct: 64  IAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLK 113

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAV WE KKP S+E ++VAPPKA EVRIK+V+T IC +D + + G       P 
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT-PLPV 63
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
           + GH                 PGD VIPL+ PQC +C+ CK  + N C K
Sbjct: 64  IAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLK 113

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAV WE KKP S+E ++VAPPKA EVRIK+V+T IC +D + + G       P 
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT-PLPV 63
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
           + GH                 PGD VIPL+ PQC +C+ CK  + N C K
Sbjct: 64  IAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLK 113

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAV WE KKP S+E ++VAPPKA EVRIK+V+T IC +D + + G       P 
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT-PLPV 63
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
           + GH                 PGD VIPL+ PQC +C+ CK  + N C K
Sbjct: 64  IAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLK 113

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAV WE KKP S+E ++VAPPKA EVRIK+V+T IC +D + + G       P 
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT-PLPV 63
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
           + GH                 PGD VIPL+ PQC +C+ CK  + N C K
Sbjct: 64  IAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLK 113

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAV WE KKP S+E ++VAPPKA EVRIK+V+T IC +D + + G       P 
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT-PLPV 63
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
           + GH                 PGD VIPL+ PQC +C+ CK  + N C K
Sbjct: 64  IAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLK 113

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAV WE KKP S+E ++VAPPKA EVRIK+V+T IC +D + + G       P 
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT-PLPV 63
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
           + GH                 PGD VIPL+ PQC +C+ CK  + N C K
Sbjct: 64  IAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLK 113

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  105 bits (262), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 51/112 (45%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAA+AW+   PL +E I+V+PPKA EVRI++++T +C TD    D    +  FP 
Sbjct: 5   KVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATD-PKKKALFPV 63
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIR 210
           VLGH                 PGD VIP + PQC  CK C S  TNLC K+R
Sbjct: 64  VLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLR 115

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAV WE KKP S+E ++VAPPKA EVRIK+V+T IC +D   + G       P 
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVSGTLVT-PLPV 63
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
           + GH                 PGD VIPL+ PQC +C+ CK  + N C K
Sbjct: 64  IAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLK 113

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score =  103 bits (258), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAV WE KKP S+E ++VAPPKA EVRIK+V+T IC +D + + G       P 
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT-PLPV 63
Query: 159 VLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
           + GH                 PGD VIPL  PQC +C+ CK  + N C K
Sbjct: 64  IAGHEAAGIVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLK 113

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 58/142 (40%), Gaps = 19/142 (13%)
Query: 95  ISLPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDG-LDSE 153
           ++LPQ +  KAAV      PL +E ++V  P  G+V +KI ++ +CHTD +  +G    +
Sbjct: 1   MTLPQTM--KAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVK 58
Query: 154 GKFPCVLGHXXXXXXXXXXXXXXXXAPGDHV-IPLYIPQCNECKFCKSSKTNLCTKIRTT 212
              P + GH                  GD V IP     C  C+ C +    LC      
Sbjct: 59  PPLPFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCE----- 113
Query: 213 QLFLTSNVTISDFNMGYSMTGS 234
                     S  N GYS+ G 
Sbjct: 114 ----------SQQNTGYSVNGG 125

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDG-LDSEGKFPCVLGH 162
           KAAV      PL+++ + V  P  G+V++KI ++ +CHTD +  DG    +   P + GH
Sbjct: 4   KAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGH 63
Query: 163 XXXXXXXXXXXXXXXXAPGDHV-IPLYIPQCNECKFCKSSKTNLCTKIRTT 212
                             GD V +P     C  C+ C      LC K + T
Sbjct: 64  EGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNT 114

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 100 VIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKF--P 157
           +++ KAA+  +  +PLS+E + +  P+  EV I+I    +C TD     G++++  F  P
Sbjct: 1   MVKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLP 60
Query: 158 CVLGHXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLC 206
            +LGH                  GD+V+         C++C+  K N+C
Sbjct: 61  IILGHENAGTIVEVGELAKVK-KGDNVVVYATWGDLTCRYCREGKFNIC 108

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 56/149 (37%), Gaps = 27/149 (18%)
Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC----- 158
           KAAV     KPL+++ + +  P  G++++ I ++ +CHTD +      +EG +P      
Sbjct: 27  KAAVVRAFGKPLTIDEVPIPQPGPGQIQVAIQASGVCHTDLHA-----AEGDWPVKPNPP 81
Query: 159 -VLGHXXXXXXXXXXXXXXXXAPGDHV-IPLYIPQCNECKFCKSSKTNLCTKIRTTQLFL 216
            + GH                  GD V IP     C  C+ C      LC +        
Sbjct: 82  FIPGHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCEE-------- 133
Query: 217 TSNVTISDFNMGYSMTGSLERGSKRDNSF 245
                    N GYS+ G        D +F
Sbjct: 134 -------QLNTGYSVNGGFAEYVVADPNF 155

>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol Dehydrogenase-Like Protein Yahk Length = 369

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Query: 101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVL 160
           ++ KA  A+  K+PL    I    P   +V+I+I    +CH+D + +    +   +PCV 
Sbjct: 21  LKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVP 80
Query: 161 GHXXXXXXXXXXXXXXXXAPGDHV-IPLYIPQCNECKFCKSSKTNLCTKIRTT 212
           GH                APGD V +   +  C  C+ C+    N C  +  T
Sbjct: 81  GHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGT 133

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDG-LDSEGKFPCVLGH 162
           KAAV  + K+PL ++ ++      GEV ++I +  +CHTD +   G    + K P + GH
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61
Query: 163 XXXXXXXXXXXXXXXXAPGDHV-IPLYIPQCNECKFCKSSKTNLC 206
                             GD V IP     C  C +C S +  LC
Sbjct: 62  EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLC 106

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDG-LDSEGKFPCVLGH 162
           KAAV  + K+PL ++ ++      GEV ++I +  +CHTD +   G    + K P + GH
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61
Query: 163 XXXXXXXXXXXXXXXXAPGDHV-IPLYIPQCNECKFCKSSKTNLC 206
                             GD V IP     C  C +C S +  LC
Sbjct: 62  EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLC 106

>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 112 KKPLSLETIQ--VAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHXXXXXXX 169
           +KP  L  I+  +  P AGEVR+K+    IC +D++   G +   K+P V+GH       
Sbjct: 27  EKPNQLSIIEREIPTPSAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVID 86
Query: 170 XXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKI 209
                      G+ V    +  C  C  C   K N+CT +
Sbjct: 87  AVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTL 126

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 9/135 (6%)
Query: 117 LETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHXXXXXXXXXXXXXX 176
           L+ +++  P+  EV +K+V+T +CHTD    D        P VLGH              
Sbjct: 21  LQALKIRQPQGDEVLVKVVATGMCHTDLIVRD-QKYPVPLPAVLGHEGSGIIEAIGPNVT 79
Query: 177 XXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLE 236
               GDHV+  Y   C +C  C +     C++      F   N + +D    +++  + +
Sbjct: 80  ELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSE------FFGRNFSGADSEGNHALC-THD 131
Query: 237 RGSKRDNSFQTTHFA 251
           +G   D+ F  + FA
Sbjct: 132 QGVVNDHFFAQSSFA 146

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
Query: 110 EPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL--------DSEGKFPCVLG 161
           E  KPLSL+ I V  PK  +V IK+ +  +CH+D +   G         D   K P  LG
Sbjct: 8   EIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLG 67
Query: 162 HXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIR 210
           H                + GD V    +     C +C+  + +LC   R
Sbjct: 68  HEIAGKIEEVGDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPR 116

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 8/109 (7%)
Query: 110 EPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL--------DSEGKFPCVLG 161
           E  KPLSL+ I V  PK  +V IK+ +  +CH+D +   G         D   K P  LG
Sbjct: 8   EIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLG 67
Query: 162 HXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIR 210
           H                + GD V          C +C+  + +LC   R
Sbjct: 68  HEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPR 116

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 8/109 (7%)
Query: 110 EPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL--------DSEGKFPCVLG 161
           E  KPLSL+ I V  PK  +V IK+ +  +CH+D +   G         D   K P  LG
Sbjct: 8   EIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLG 67
Query: 162 HXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIR 210
           H                + GD V          C +C+  + +LC   R
Sbjct: 68  HEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPR 116

>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 8/109 (7%)
Query: 110 EPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL--------DSEGKFPCVLG 161
           E  KPLSL+ I V  PK  +V IK+ +  +CH+D +   G         D   K P  LG
Sbjct: 8   EIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLG 67
Query: 162 HXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIR 210
           H                + GD V          C +C+  + +LC   R
Sbjct: 68  HEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPR 116

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 42/109 (38%), Gaps = 8/109 (7%)
Query: 110 EPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL--------DSEGKFPCVLG 161
           E  KPL LE I +  PK  +V IKI +  +CH+D +   G         D   K P  LG
Sbjct: 8   EIGKPLKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLG 67
Query: 162 HXXXXXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIR 210
           H                + GD V          C +C+  + +LC   R
Sbjct: 68  HEIAGRIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPR 116

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 125 PKAGEVRIKIVSTAICHTDAYTLDGLDSEGKF--PCVLGHXXXXXXXXXXXXXXXXAPGD 182
           P  GE+ +K+ +  +CH+D + +D   ++  +  P  LGH                  GD
Sbjct: 23  PGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGD 82
Query: 183 HVIPLYIP-QCNECKFCKSSKTNLCTK 208
            V  +Y P  C  C  C   + N CT+
Sbjct: 83  AVA-VYGPWGCGACHACARGRENYCTR 108

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 5/95 (5%)
Query: 113 KPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHXXXXXXXXXX 172
           +PL  +  +++    G + ++I+S  +C +D +   G D     P +LGH          
Sbjct: 28  QPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVN 87
Query: 173 XX-----XXXXAPGDHVIPLYIPQCNECKFCKSSK 202
                       PGD ++      C EC +CK SK
Sbjct: 88  GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSK 122

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Query: 115 LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEG-KFPCVLGHXXXXXXXXXXX 173
           L +  + V  P   EVR+++ + A+ H D +   G+ S     P VLG            
Sbjct: 15  LEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGP 74
Query: 174 XXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTK 208
                APGD V+      C  C+ C + + NLC +
Sbjct: 75  GVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPR 109

>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 4/101 (3%)
Query: 113 KPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHXXXXXXXXXX 172
           KP       V P    +V I I+   ICH+D ++      EG +P + GH          
Sbjct: 18  KPHDFSRHAVGPR---DVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEIAGIIKEVG 74
Query: 173 XXXXXXAPGDHV-IPLYIPQCNECKFCKSSKTNLCTKIRTT 212
                   GD V +  ++  C  CK CK  +   CTK+  T
Sbjct: 75  KGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFT 115

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 1/109 (0%)
Query: 106 AVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHXXX 165
           AV  E    +S+  + +  P   ++ +K+ +  IC TD + L G +     P  LGH   
Sbjct: 26  AVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHG-EFPSTPPVTLGHEFC 84
Query: 166 XXXXXXXXXXXXXAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQL 214
                        APG  +       C  C  C++ + NLC  +R   +
Sbjct: 85  GIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGI 133

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	261
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	4e-79
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	2e-77
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	2e-77
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	4e-75
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	2e-74
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	7e-71
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	2e-66
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	3e-38
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	2e-34
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	6e-34
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	4e-33
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	5e-32
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	4e-31
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	2e-29
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	3e-29
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	1e-28
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	1e-28
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	2e-28
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	3e-28
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	3e-27
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	4e-27
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	9e-27
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	3e-26
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	1e-23
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	2e-21
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	6e-21
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	2e-20
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	2e-19
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	4e-19
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	4e-19
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	6e-19
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	9e-19
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	2e-18
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	2e-17
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	2e-17
3gms_A	340	Putative NADPH:quinone reductase; structural genom	3e-17
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	8e-17
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	9e-17
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	2e-16
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	2e-16
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	9e-16
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	3e-15
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	4e-15
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	9e-15
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	2e-14
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	3e-14
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	2e-13
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	8e-13
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	4e-12
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	1e-11
4eye_A	342	Probable oxidoreductase; structural genomics, niai	1e-11
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	1e-11
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	2e-11
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	2e-11
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	7e-11
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	1e-10
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	4e-10
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	2e-08
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	9e-07
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	9e-07

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  242 bits (620), Expect = 4e-79
 Identities = 85/115 (73%), Positives = 96/115 (83%)

Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAVAWE  KPLS+E I+VAPPKA EVRIKI++TA+CHTDAYTL G D EG FP 
Sbjct: 3   EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 62

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           +LGH G+GIVESVGEGVT +  GD VIPLYIPQC ECKFC + KTNLC KIR TQ
Sbjct: 63  ILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQ 117

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  237 bits (608), Expect = 2e-77
 Identities = 63/126 (50%), Positives = 82/126 (65%), Gaps = 1/126 (0%)

Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAA+AW+   PL +E I+V+PPKA EVRI++++T +C TD    D    +  FP 
Sbjct: 5   KVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDP-KKKALFPV 63

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTS 218
           VLGHE +GIVESVG GVT+  PGD VIP + PQC  CK C S  TNLC K+R  +     
Sbjct: 64  VLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTID 123

Query: 219 NVTISD 224
              + D
Sbjct: 124 QELMED 129

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  237 bits (608), Expect = 2e-77
 Identities = 68/120 (56%), Positives = 83/120 (69%), Gaps = 1/120 (0%)

Query: 94  MISLPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE 153
           M +  + I CKAAVAWEP KPLSLETI VAPPKA EVRIKI+++ IC +D+  L  +   
Sbjct: 1   MCTAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS 60

Query: 154 GKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
             FP +LGHE  G+VES+G GVT V PGD VIPL++PQC  C+ CKSS +N C K     
Sbjct: 61  K-FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGA 119

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  232 bits (593), Expect = 4e-75
 Identities = 67/115 (58%), Positives = 82/115 (71%)

Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAVAWE  KPL +E I+V  P A E+RIKI++T +CHTD Y L     +  FP 
Sbjct: 5   KVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPV 64

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           VLGHEG+GIVESVG GVT   PG+ VIPL+I QC EC+FC+S KTN C K    +
Sbjct: 65  VLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANE 119

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  230 bits (588), Expect = 2e-74
 Identities = 62/115 (53%), Positives = 81/115 (70%), Gaps = 1/115 (0%)

Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAV WE KKP S+E ++VAPPKA EVRIK+V+T IC +D + + G       P 
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP-LPV 63

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           + GHE +GIVES+GEGVT+V PGD VIPL+ PQC +C+ CK  + N C K   + 
Sbjct: 64  IAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSM 118

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  220 bits (564), Expect = 7e-71
 Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 2/116 (1%)

Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           ++ +  AAV         L+ +++  P+  EV +K+V+T +CHTD    D        P 
Sbjct: 3   ELKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVP-LPA 61

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQL 214
           VLGHEGSGI+E++G  VT +  GDHV+  Y   C +C  C +     C++      
Sbjct: 62  VLGHEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNF 116

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  209 bits (535), Expect = 2e-66
 Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 5/118 (4%)

Query: 101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVL 160
           ++  A V  +  +PL  +  +++    G + ++I+S  +C +D +   G D     P +L
Sbjct: 16  LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIIL 75

Query: 161 GHEGSGIVESVGEGVTS-----VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           GHEG+G V  V           + PGD ++      C EC +CK SK       R   
Sbjct: 76  GHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVY 133

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  135 bits (343), Expect = 3e-38
 Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 2/111 (1%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL--DSEGKFPCVLG 161
           KA    E      +  I    P  GE+ +K+ +  +CH+D + +D          P  LG
Sbjct: 2   KAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLG 61

Query: 162 HEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTT 212
           HEG G V  +GEGVT    GD V       C  C  C   + N CT+    
Sbjct: 62  HEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADL 112

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  126 bits (318), Expect = 2e-34
 Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 4/113 (3%)

Query: 104 KAAVAWEPKKPLSLETIQV-APPKAGEVRIKIVSTAICHTDAYTLDG---LDSEGKFPCV 159
           KAA   E  KPL +E +         +V ++I    +CHTD + + G      + K P  
Sbjct: 17  KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYT 76

Query: 160 LGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTT 212
           LGHE  G +E V EGV  +  GD VI         C  C++ +   C  +   
Sbjct: 77  LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFP 129

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  124 bits (314), Expect = 6e-34
 Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 3/111 (2%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE--GKFPCVLG 161
           KAA+  +  +PLS+E + +  P+  EV I+I    +C TD     G++++   + P +LG
Sbjct: 5   KAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILG 64

Query: 162 HEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTT 212
           HE +G +  VGE +  V  GD+V+         C++C+  K N+C      
Sbjct: 65  HENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIP 114

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  122 bits (308), Expect = 4e-33
 Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 10/116 (8%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDG--------LDSEGK 155
           +A    E  KPLSL+ I V  PK  +V IK+ +  +CH+D +   G         D   K
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61

Query: 156 FPCVLGHEGSGIVESVGEGVTSVAPGDHV-IPLYIPQCNECKFCKSSKTNLCTKIR 210
            P  LGHE +G +E VG+ V   + GD V +  +      C +C+  + +LC   R
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQG-EGNCYYCRIGEEHLCDSPR 116

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  119 bits (300), Expect = 5e-32
 Identities = 41/111 (36%), Positives = 59/111 (53%), Gaps = 2/111 (1%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDG-LDSEGKFPCVLGH 162
           KAAV      PL+++ + V  P  G+V++KI ++ +CHTD +  DG    +   P + GH
Sbjct: 4   KAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGH 63

Query: 163 EGSGIVESVGEGVTSVAPGDHV-IPLYIPQCNECKFCKSSKTNLCTKIRTT 212
           EG G V +VG GV+ V  GD V +P     C  C+ C      LC K + T
Sbjct: 64  EGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNT 114

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  116 bits (294), Expect = 4e-31
 Identities = 42/111 (37%), Positives = 59/111 (53%), Gaps = 2/111 (1%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDG-LDSEGKFPCVLGH 162
           KAAV  + K+PL ++ ++      GEV ++I +  +CHTD +   G    + K P + GH
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61

Query: 163 EGSGIVESVGEGVTSVAPGDHV-IPLYIPQCNECKFCKSSKTNLCTKIRTT 212
           EG GIVE VG GVT +  GD V IP     C  C +C S +  LC   +  
Sbjct: 62  EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNA 112

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  112 bits (282), Expect = 2e-29
 Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 7/112 (6%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTD--AYTLDGL-DSEGKFPCVL 160
           +A     P++ L+L    V  P  GE+ +++ + +IC TD   +  D       + P V 
Sbjct: 2   RALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVT 61

Query: 161 GHEGSGIVESVGEGVTSVAPGDHVI--PLYIPQCNECKFCKSSKTNLCTKIR 210
           GHE SG+VE+VG GV     GDHV      +  C+ C  C++   ++C   +
Sbjct: 62  GHEFSGVVEAVGPGVRRPQVGDHVSLESHIV--CHACPACRTGNYHVCLNTQ 111

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  111 bits (281), Expect = 3e-29
 Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 6/120 (5%)

Query: 96  SLPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLD--SE 153
           S+P+    K  + +E    L  + I V  PKA E+ I +  + +CHTD +   G D    
Sbjct: 1   SIPE--TQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHG-DWPLP 57

Query: 154 GKFPCVLGHEGSGIVESVGEGVTSVAPGDHV-IPLYIPQCNECKFCKSSKTNLCTKIRTT 212
            K P V GHEG+G+V  +GE V     GD+  I      C  C++C+    + C     +
Sbjct: 58  VKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLS 117

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  110 bits (278), Expect = 1e-28
 Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 7/112 (6%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTD--AYTLDGL-DSEGKFPCVL 160
            A +  +P     L  + V  P  GEV IK+++T+IC TD   Y  +    S  K P ++
Sbjct: 6   VAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIM 65

Query: 161 GHEGSGIVESVGEGVTSVAPGDHVI--PLYIPQCNECKFCKSSKTNLCTKIR 210
           GHE +G V  +G GV  +  GD+V      +  C +C  C+  + ++C   +
Sbjct: 66  GHEVAGEVVEIGPGVEGIEVGDYVSVETHIV--CGKCYACRRGQYHVCQNTK 115

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  110 bits (277), Expect = 1e-28
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL---DSEGKFPCVL 160
           KA      +    +       P++GE  ++ +   +C TD   + G      EG+   VL
Sbjct: 2   KAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVL 61

Query: 161 GHEGSGIVESVGEGVTSVAPGDHV--IPLYIPQCNECKFCKSSKTNLCTKIR 210
           GHE  G+V  V    T +  GD V       P     ++ +  + ++     
Sbjct: 62  GHEAVGVV--VDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGM 111

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  110 bits (277), Expect = 2e-28
 Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 6/109 (5%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHE 163
           KA         +S+  + +  P   ++ +K+ +  IC TD + L G +     P  LGHE
Sbjct: 25  KAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHG-EFPSTPPVTLGHE 82

Query: 164 GSGIVESVGEGVTSVAPGDHVI--PLYIPQCNECKFCKSSKTNLCTKIR 210
             GIV   G  V  +APG  +   P  I  C  C  C++ + NLC  +R
Sbjct: 83  FCGIVVEAGSAVRDIAPGARITGDPN-IS-CGRCPQCQAGRVNLCRNLR 129

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  109 bits (274), Expect = 3e-28
 Identities = 40/111 (36%), Positives = 54/111 (48%), Gaps = 6/111 (5%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDA-YTLDG--LDSEGKFPCVL 160
            +AV    +  L LE   +  PK  EV +++    IC +D  Y   G   D   K P V+
Sbjct: 6   LSAV-LYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 64

Query: 161 GHEGSGIVESVGEGVTSVAPGDHV-IPLYIPQCNECKFCKSSKTNLCTKIR 210
           GHE SG V  VG+ V  +  GD V +   +P C  C+FCK  K NLC  + 
Sbjct: 65  GHEASGTVVKVGKNVKHLKKGDRVAVEPGVP-CRRCQFCKEGKYNLCPDLT 114

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  106 bits (268), Expect = 3e-27
 Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 7/110 (6%)

Query: 104 KAAVAWEPKKPLSLETIQV-APPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGH 162
           K+ V       + +    +       EVR+KI S+ +C +D   +   +    +P  LGH
Sbjct: 2   KSVVNDTDGI-VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFK-NGAHYYPITLGH 59

Query: 163 EGSGIVESVGEGVTSVAPGDHVI--PLYIPQCNECKFCKSSKTNLCTKIR 210
           E SG +++VG GV  + PGD V   PL +P C  C  C     + C K  
Sbjct: 60  EFSGYIDAVGSGVDDLHPGDAVACVPL-LP-CFTCPECLKGFYSQCAKYD 107

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  106 bits (267), Expect = 4e-27
 Identities = 38/115 (33%), Positives = 48/115 (41%), Gaps = 14/115 (12%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDA-YTLDGL--DSEGKFPCVL 160
            + V       L LE   +  P   EV +++ S  IC +D  Y   G   +   K P VL
Sbjct: 9   LSLV-VHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67

Query: 161 GHEGSGIVESVGEGVTSVAPGDHV-----IPLYIPQCNECKFCKSSKTNLCTKIR 210
           GHE SG VE VG  V  + PGD V      P         +FCK  + NL   I 
Sbjct: 68  GHEASGTVEKVGSSVKHLKPGDRVAIEPGAP-----RENDEFCKMGRYNLSPSIF 117

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  105 bits (264), Expect = 9e-27
 Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 11/118 (9%)

Query: 104 KAAVAWEPKKPLSLETIQV-APPKAGEVRIKIVSTAICHTDAYTLDGLDS-----EGKFP 157
           KA +   P   + ++ +        G+++I+ +   IC  D   ++G  +     +GK  
Sbjct: 2   KAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDF 61

Query: 158 CVLGHEGSGIVESVGEGVTSVAPGDHVIP-LYIPQCNECKFCKSSKTNLCTKIRTTQL 214
            VLGHE  G+VE    G    + GD V+P      C  C+ C   + + C      + 
Sbjct: 62  LVLGHEAIGVVEESYHG---FSQGDLVMPVNRRG-CGICRNCLVGRPDFCETGEFGEA 115

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  104 bits (261), Expect = 3e-26
 Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 9/117 (7%)

Query: 100 VIECKAAVAWEPKKPLSLETIQVAP-PKAGEVRIKIVSTAICHTD--AYTLDGL-DSEGK 155
               +  + W  +   SLE++Q     K GEV + + ST IC +D   +    +     +
Sbjct: 13  FTNPQHDL-WISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVE 71

Query: 156 FPCVLGHEGSGIVESVGEGVTSVAPGDHVI--PLYIPQCNECKFCKSSKTNLCTKIR 210
              VLGHE +G V +V   V S+  GD V   P  +  CN C+ C + + N C ++ 
Sbjct: 72  CDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEP-QVI-CNACEPCLTGRYNGCERVD 126

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score = 97.8 bits (244), Expect = 1e-23
 Identities = 26/123 (21%), Positives = 42/123 (34%), Gaps = 19/123 (15%)

Query: 104 KAAVAWEPKKPLSLETIQV-APPKAGEVRIKIVSTAICHTDAYTLDG-------LDSEGK 155
             +  W   + + +E +      K  E+ IK+ +  IC +D +                 
Sbjct: 32  LGSKVWRYPE-VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTG 90

Query: 156 FPCVLGHEGSGIVESVGEGVTS------VAPGDHVI--PLYIPQCNECKFCKSSKTNLCT 207
           FP  LGHE SG+V   G    +         G+ V    +    C  C+ C     N C 
Sbjct: 91  FPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLW--CGHCRPCAEGFPNHCE 148

Query: 208 KIR 210
            + 
Sbjct: 149 NLN 151

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score = 90.7 bits (226), Expect = 2e-21
 Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 3/111 (2%)

Query: 104 KAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL-DSEGKFPCVL 160
           +A V      P  L +  + V  P   EVR+++ + A+ H D +   G+   +   P VL
Sbjct: 2   RAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVL 61

Query: 161 GHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT 211
           G +GSG+V++VG GV   APGD V+      C  C+ C + + NLC + + 
Sbjct: 62  GADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQI 112

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score = 89.5 bits (223), Expect = 6e-21
 Identities = 21/105 (20%), Positives = 36/105 (34%), Gaps = 2/105 (1%)

Query: 106 AVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGS 165
             A      +     +   P   +  ++ ++ A C +D +T+       +   +LGHE  
Sbjct: 3   GFAMLSIGKVGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAV 62

Query: 166 GIVESVGEGVTSVAPGDHVI-PLYIPQCNECKFCKSSKTNLCTKI 209
           G V  VG  V    PGD V+ P   P        +         +
Sbjct: 63  GEVVEVGSEVKDFKPGDRVVVPAITP-DWRTSEVQRGYHQHSGGM 106

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 88.4 bits (220), Expect = 2e-20
 Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 4/125 (3%)

Query: 92  HIMISLPQV---IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLD 148
           H M   P+    ++     A +    LS            +VR K++   +CH+D +++ 
Sbjct: 3   HGMSKSPEEEHPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIK 62

Query: 149 GLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHV-IPLYIPQCNECKFCKSSKTNLCT 207
                  +P V GHE  G V  VG  V  V  GD V +   +  C+ C+ C +   N C 
Sbjct: 63  NDWGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCP 122

Query: 208 KIRTT 212
           K+  T
Sbjct: 123 KMILT 127

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 85.4 bits (212), Expect = 2e-19
 Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 1/113 (0%)

Query: 101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVL 160
           ++ KA  A+  K+PL    I    P   +V+I+I    +CH+D + +    +   +PCV 
Sbjct: 21  LKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVP 80

Query: 161 GHEGSGIVESVGEGVTSVAPGDHV-IPLYIPQCNECKFCKSSKTNLCTKIRTT 212
           GHE  G V +VG+ V   APGD V +   +  C  C+ C+    N C  +  T
Sbjct: 81  GHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGT 133

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score = 84.6 bits (210), Expect = 4e-19
 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)

Query: 110 EPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL-DSEGKFPCVLGHEGSGIV 168
           +P K + L+ +++A  +  +VR+K+++  I  +D   + G      + P V G+EG   V
Sbjct: 37  DPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQV 96

Query: 169 ESVGEGVTSVAPGDHVIPLYIPQ 191
            +VG  VT + PGD VIP     
Sbjct: 97  VAVGSNVTGLKPGDWVIPANAGL 119

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score = 84.6 bits (210), Expect = 4e-19
 Identities = 37/140 (26%), Positives = 55/140 (39%), Gaps = 27/140 (19%)

Query: 106 AVAWEPKKPLSLETIQVAPPK---------AGEVRIKIVSTAICHTDAYTLDGLDSEGKF 156
            V +     + ++   +  PK            V +K+VST IC +D + + G  +    
Sbjct: 5   GVVYLGSGKVEVQK--IDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQV- 61

Query: 157 PCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIP---QCNECKFCKSSKTNLCTKIRTTQ 213
             VLGHE +G V   G  V ++  GD V    +P    C  C+ CK   T +C       
Sbjct: 62  GLVLGHEITGEVIEKGRDVENLQIGDLVS---VPFNVACGRCRSCKEMHTGVC------- 111

Query: 214 LFLTSNVTISDFNMGYSMTG 233
             LT N   +    GY   G
Sbjct: 112 --LTVNPARAGGAYGYVDMG 129

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 83.8 bits (208), Expect = 6e-19
 Identities = 32/120 (26%), Positives = 46/120 (38%), Gaps = 1/120 (0%)

Query: 94  MISLPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE 153
           M  +    +     A +P   LS  T  +      +V I+I+   ICHTD +        
Sbjct: 1   MGIMEAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGM 60

Query: 154 GKFPCVLGHEGSGIVESVGEGVTSVAPGDHV-IPLYIPQCNECKFCKSSKTNLCTKIRTT 212
             +P V GHE  G V  VG  V+    GD V +   +  C  C  C+      C K   +
Sbjct: 61  SNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWS 120

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score = 83.9 bits (208), Expect = 9e-19
 Identities = 38/139 (27%), Positives = 58/139 (41%), Gaps = 24/139 (17%)

Query: 106 AVAWEPKKPLSLETIQVAPPK--------AGEVRIKIVSTAICHTDAYTLDGLDSEGKFP 157
           +V +   + L +ET  V  PK           V +K+VST IC +D +   G     K  
Sbjct: 5   SVVYHGTRDLRVET--VPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFIVPK-G 61

Query: 158 CVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIP---QCNECKFCKSSKTNLCTKIRTTQL 214
            VLGHE +G V   G  V  +  GD V    +P    C  C+ CK +++++C       +
Sbjct: 62  HVLGHEITGEVVEKGSDVELMDIGDLVS---VPFNVACGRCRNCKEARSDVCE---NNLV 115

Query: 215 FLTSNVTISDFNMGYSMTG 233
               N        G+ + G
Sbjct: 116 ----NPDADLGAFGFDLKG 130

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 82.3 bits (204), Expect = 2e-18
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 1/113 (0%)

Query: 101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVL 160
           ++ K    +   +               +V I I+   ICH+D ++      EG +P + 
Sbjct: 3   VQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIP 62

Query: 161 GHEGSGIVESVGEGVTSVAPGDHV-IPLYIPQCNECKFCKSSKTNLCTKIRTT 212
           GHE +GI++ VG+GV     GD V +  ++  C  CK CK  +   CTK+  T
Sbjct: 63  GHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFT 115

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 79.7 bits (197), Expect = 2e-17
 Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 12/94 (12%)

Query: 110 EPKKPLSLETIQVAPP--KAGEVRIKIVSTAICHTDAYTLDGL----------DSEGKFP 157
           EPK  L  ++ ++        EV +K + + +  +D   + G+              +  
Sbjct: 14  EPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPA 73

Query: 158 CVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQ 191
              G+EG   V  VG  V+S+  GD VIP ++  
Sbjct: 74  APCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNF 107

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score = 79.9 bits (197), Expect = 2e-17
 Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 19/120 (15%)

Query: 110 EPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEG--------------- 154
           + +K L L  + +      EV + +++++I +   ++                       
Sbjct: 45  DVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWAT 104

Query: 155 ---KFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT 211
              +   VLG + SG+V   G GV    PGDHVI ++    +E +        L T+ R 
Sbjct: 105 RHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVI-VHPAHVDEQEPATHGDGMLGTEQRA 163

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 78.8 bits (195), Expect = 3e-17
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 1/79 (1%)

Query: 110 EPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL-DSEGKFPCVLGHEGSGIV 168
            PK  L +E   + P K  EV ++++   I  +D   + G        P + G+EG GIV
Sbjct: 15  NPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIV 74

Query: 169 ESVGEGVTSVAPGDHVIPL 187
           E+VG  V+    G  V+PL
Sbjct: 75  ENVGAFVSRELIGKRVLPL 93

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score = 78.0 bits (193), Expect = 8e-17
 Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 115 LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL-DSEGKFPCVLGHEGSGIVESVGE 173
           L L    V      ++ ++ ++ ++ + D   L+     +  FP V   + SG+VE+VG+
Sbjct: 41  LKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGK 100

Query: 174 GVTSVAPGDHVIPLYIPQCNECKFCKSSKT 203
            VT   PGD VI  + P   +     + +T
Sbjct: 101 SVTRFRPGDRVISTFAPGWLDGLRPGTGRT 130

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 77.8 bits (192), Expect = 9e-17
 Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHE 163
            A    +  +               +V +++ + AI  +D                LG +
Sbjct: 13  TALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF---ATPWAFLGTD 69

Query: 164 GSGIVESVGEGVTSVAPGDHVI 185
            +G V +VG  VT +  GD V 
Sbjct: 70  YAGTVVAVGSDVTHIQVGDRVY 91

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score = 77.1 bits (190), Expect = 2e-16
 Identities = 19/116 (16%), Positives = 39/116 (33%), Gaps = 21/116 (18%)

Query: 104 KAAVAWEPKKP---LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKF---- 156
            A +    K P   + L+ + V     GE  + ++++++ +   +T              
Sbjct: 44  FAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLER 103

Query: 157 --------------PCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFC 198
                           V+G + +G+V   G GV +   GD V+   +    E    
Sbjct: 104 YGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDG 159

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 76.4 bits (189), Expect = 2e-16
 Identities = 34/119 (28%), Positives = 49/119 (41%), Gaps = 2/119 (1%)

Query: 96  SLPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGK 155
           S P+  E  A  + E  K          P    ++ IKI +  +C +D +   G     K
Sbjct: 2   SYPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMK 61

Query: 156 FPCVLGHEGSGIVESVGEGV-TSVAPGDHV-IPLYIPQCNECKFCKSSKTNLCTKIRTT 212
            P V+GHE  G V  +G    + +  G  V +   +  C EC  CK+     CTK  TT
Sbjct: 62  MPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTT 120

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 74.5 bits (184), Expect = 9e-16
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 104 KAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDS-----EGKF 156
           KA    +   P  L L        +  ++ IK+ + ++   D  T +G        +   
Sbjct: 8   KAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNL 67

Query: 157 PCVLGHEGSGIVESVGEGVTSVAPGDHVI 185
           P  LG++ SG V  +G  V +V  GD V+
Sbjct: 68  PSGLGYDFSGEVIELGSDVNNVNIGDKVM 96

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 73.4 bits (181), Expect = 3e-15
 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 2/83 (2%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL--DSEGKFPCVLG 161
            AAV  E   P  L  +    P  G+V ++I ++     DA    G    ++   P +LG
Sbjct: 9   IAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILG 68

Query: 162 HEGSGIVESVGEGVTSVAPGDHV 184
            + +G V +VG  V S   GD V
Sbjct: 69  MDLAGTVVAVGPEVDSFRVGDAV 91

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 72.6 bits (179), Expect = 4e-15
 Identities = 15/84 (17%), Positives = 32/84 (38%), Gaps = 3/84 (3%)

Query: 104 KAAVAWEPKKP---LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVL 160
           +    W  +     ++L ++ +    A ++ ++  +  I   D   +           V 
Sbjct: 3   EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVP 62

Query: 161 GHEGSGIVESVGEGVTSVAPGDHV 184
           G +G+G++  VG  V S   G  V
Sbjct: 63  GVDGAGVIVKVGAKVDSKMLGRRV 86

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 71.9 bits (177), Expect = 9e-15
 Identities = 23/70 (32%), Positives = 30/70 (42%)

Query: 115 LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEG 174
           L       A P   E++++  +  I   D Y   GL      P  LG E +GIV  VG G
Sbjct: 16  LQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSG 75

Query: 175 VTSVAPGDHV 184
           V  +  GD V
Sbjct: 76  VKHIKAGDRV 85

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 71.1 bits (175), Expect = 2e-14
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)

Query: 115 LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL---DSEGKFPCVLGHEGSGIVESV 171
              E ++V  P  G+VR++  +  +   D Y   G+      G+ P V+G E + +VE V
Sbjct: 16  FVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEV 75

Query: 172 GEGVTSVAPGDHV 184
           G GVT    G+ V
Sbjct: 76  GPGVTDFTVGERV 88

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 70.3 bits (173), Expect = 3e-14
 Identities = 22/70 (31%), Positives = 31/70 (44%)

Query: 115 LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEG 174
           L     +   P    V ++  +  +   D Y   GL      P  LG EG+G+VE+VG+ 
Sbjct: 16  LEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDE 75

Query: 175 VTSVAPGDHV 184
           VT    GD V
Sbjct: 76  VTRFKVGDRV 85

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 67.6 bits (166), Expect = 2e-13
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 1/70 (1%)

Query: 115 LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEG 174
           +  E   V      E+ IK   T + + ++Y   G+    + P VLG E SG V + G+G
Sbjct: 23  IKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGI-YPCEKPYVLGREASGTVVAKGKG 81

Query: 175 VTSVAPGDHV 184
           VT+   GD V
Sbjct: 82  VTNFEVGDQV 91

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 66.1 bits (162), Expect = 8e-13
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 3/87 (3%)

Query: 104 KAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL-DSEGKFPCVL 160
           +A V         L L    +  P+ GE++I++ +  +   D     G  D+  K P V 
Sbjct: 5   RAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVP 64

Query: 161 GHEGSGIVESVGEGVTSVAPGDHVIPL 187
           G E SGIVE++G+ V     GD V+  
Sbjct: 65  GFECSGIVEALGDSVKGYEIGDRVMAF 91

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 64.1 bits (157), Expect = 4e-12
 Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 6/96 (6%)

Query: 94  MISLPQVIECKAAVAWEPKKP--LSLET-IQVAPPKAGEVRIKIVSTAICHTDAYTLDGL 150
           M +  +++  +A   +E   P  L L + I V  PK  +V IK+ +  +   + Y   G 
Sbjct: 23  MATGQKLM--RAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGT 80

Query: 151 -DSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHVI 185
              +   P   G + +G++E+VG+  ++   GD V 
Sbjct: 81  YSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVF 116

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 62.7 bits (153), Expect = 1e-11
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 104 KAAVAWEP---KKPLSLETIQVAPP--KAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           KA    +P       SL  I++  P     ++ +++ + ++   D         +G    
Sbjct: 24  KAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWK 83

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHV 184
           V+G++ +GIV +VG  VT   PGD V
Sbjct: 84  VIGYDAAGIVSAVGPDVTLFRPGDEV 109

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 62.6 bits (153), Expect = 1e-11
 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 14/90 (15%)

Query: 104 KAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGK------ 155
           KA  A     P  L    ++        V + + +  +C  D      L ++G+      
Sbjct: 23  KAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDY-----LMTKGEYQLKME 77

Query: 156 FPCVLGHEGSGIVESVGEGVTSVAPGDHVI 185
            P V G E +G+V S  EG + + PGD V+
Sbjct: 78  PPFVPGIETAGVVRSAPEG-SGIKPGDRVM 106

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 62.8 bits (153), Expect = 1e-11
 Identities = 23/100 (23%), Positives = 32/100 (32%), Gaps = 19/100 (19%)

Query: 104 KAAVAWEPKKPLSLETIQVAP----PKAGEVRIKIVSTAICHTDAYTLDGL--------- 150
            A V  +  K   L   Q           EV +K+ + ++   D     G          
Sbjct: 23  MAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKR 82

Query: 151 ------DSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHV 184
                     +FP  LG + SG+V   G  V    PGD V
Sbjct: 83  DPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEV 122

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 62.6 bits (152), Expect = 2e-11
 Identities = 19/99 (19%), Positives = 31/99 (31%), Gaps = 29/99 (29%)

Query: 115 LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL------------------------ 150
           LSL++I    P   EV I+I ++ +  +D   L G                         
Sbjct: 20  LSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEG 79

Query: 151 -----DSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHV 184
                         +G+EG+G+V   G    + A     
Sbjct: 80  AMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKT 118

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 61.9 bits (151), Expect = 2e-11
 Identities = 17/78 (21%), Positives = 27/78 (34%), Gaps = 2/78 (2%)

Query: 110 EPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL-DSEGKFPCVLGHEGSGIV 168
             +  L    I V  P   +V IK+   +I  +D   + G            G EG G +
Sbjct: 32  AMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGFEGVGTI 91

Query: 169 ESVGEGVTS-VAPGDHVI 185
            + G+   +    G  V 
Sbjct: 92  VAGGDEPYAKSLVGKRVA 109

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 61.3 bits (149), Expect = 7e-11
 Identities = 34/143 (23%), Positives = 54/143 (37%), Gaps = 18/143 (12%)

Query: 59  LLLEDNQHEDKEARVTHELVSKNTDKLVIRN-------LCHIMISLPQVIECKAAVAWEP 111
           +L++  +       +   L       L +R        L  +       +        E 
Sbjct: 157 VLVDVPEPAQLLPALPGVLACGEPQ-LALRRGGAHAPRLAGLGSDDVLPVPDGTGWRLEA 215

Query: 112 KKPLSLETIQ-------VAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEG 164
            +P SL+ +         AP   GEVRI + +  +   DA    G+         LG EG
Sbjct: 216 TRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYPG---VASLGSEG 272

Query: 165 SGIVESVGEGVTSVAPGDHVIPL 187
           +G+V   G GVT +APGD V+ +
Sbjct: 273 AGVVVETGPGVTGLAPGDRVMGM 295

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 7/86 (8%)

Query: 104 KAAVAWEPKK---PLSLETIQVAPP--KAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           KA    +P K       +T  +  P  K  E+ +KI S ++   D        S+   P 
Sbjct: 4   KAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVSK--APR 61

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHV 184
           VLG +  G+VESVG  VT    GD V
Sbjct: 62  VLGFDAIGVVESVGNEVTMFNQGDIV 87

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 58.4 bits (142), Expect = 4e-10
 Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 13/92 (14%)

Query: 104 KAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFP---- 157
           +         P  + +    +     GEV ++  +  +   D         +G +P    
Sbjct: 30  RFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDI-----AQRQGSYPPPKD 84

Query: 158 --CVLGHEGSGIVESVGEGVTSVAPGDHVIPL 187
              +LG E SG +  VG GV+  A GD V  L
Sbjct: 85  ASPILGLELSGEIVGVGPGVSGYAVGDKVCGL 116

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 17/93 (18%), Positives = 31/93 (33%), Gaps = 2/93 (2%)

Query: 94  MISLPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE 153
             S+ Q +          +         V  P  G++ ++     +  +D     G    
Sbjct: 20  FQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDP 79

Query: 154 G-KFPCVLGHEGSGIVESVGEGVTS-VAPGDHV 184
             K P  +G EG G V ++G   ++    G  V
Sbjct: 80  SVKPPFDIGFEGIGEVVALGLSASARYTVGQAV 112

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 47.9 bits (115), Expect = 9e-07
 Identities = 21/101 (20%), Positives = 33/101 (32%), Gaps = 24/101 (23%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGK------FP 157
           KA V      PL L  +     + GEV +++ +  +   D      L   G        P
Sbjct: 2   KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADH-----LMRLGAYLTRLHPP 56

Query: 158 CVLGHEGSGIVESVGEGVTS-----------VAPGDHVIPL 187
            + G E  G+V   G    +             P   ++PL
Sbjct: 57  FIPGMEVVGVV--EGRRYAALVPQGGLAERVAVPKGALLPL 95

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 48.0 bits (115), Expect = 9e-07
 Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 14/93 (15%)

Query: 104 KAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFP---- 157
            A    +P  P  L ++ +    P  GEV +K+ ++A+   D      +  +G++     
Sbjct: 24  LAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADL-----MQRQGQYDPPPG 78

Query: 158 --CVLGHEGSGIVESVGEGVTS-VAPGDHVIPL 187
              +LG E SG V  +G G       GD  + L
Sbjct: 79  ASNILGLEASGHVAELGPGCQGHWKIGDTAMAL 111

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	261
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	99.98
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	99.98
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	99.97
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	99.97
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	99.97
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	99.97
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	99.97
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	99.97
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	99.97
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	99.97
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	99.97
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	99.97
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	99.97
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	99.97
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	99.96
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	99.96
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	99.96
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	99.96
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	99.96
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	99.96
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	99.96
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	99.96
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	99.96
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	99.96
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	99.96
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	99.96
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	99.96
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	99.95
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	99.95
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	99.95
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	99.95
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.95
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	99.95
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	99.95
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	99.95
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	99.94
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	99.94
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	99.94
3gms_A	340	Putative NADPH:quinone reductase; structural genom	99.94
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	99.94
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	99.94
4eye_A	342	Probable oxidoreductase; structural genomics, niai	99.94
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	99.94
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	99.94
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	99.93
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	99.93
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	99.93
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	99.93
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	99.93
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	99.93
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	99.93
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	99.93
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	99.93
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	99.93
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	99.93
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	99.93
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	99.92
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	99.92
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	99.92
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	99.91
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	99.91
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	99.89
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	99.89
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	99.88
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	99.88
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	99.86
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	99.85
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	99.82
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	99.78
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.46
3nx6_A	95	10KDA chaperonin; bacterial blight, XOO4289, groes	87.31
1g31_A	111	GP31; chaperone, CO-chaperonin, groes, in VIVO pro	87.07
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	86.9
1pcq_O	97	Groes protein; chaperone; HET: ADP; 2.81A {Escheri	80.22
1p3h_A	99	10 kDa chaperonin; beta barrel, acidic cluster, fl	80.13

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=99.98  E-value=5.9e-32  Score=244.83  Aligned_cols=164  Identities=55%  Similarity=0.856  Sum_probs=147.3

Q ss_pred             CCcceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCC
Q psy7798          97 LPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVT  176 (261)
Q Consensus        97 ~~~~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~  176 (261)
                      ...+++||++++.++++++++++++.|+|++|||+|||+++|||++|++.+.|.++...+|.++|||++|+|+++|++|+
T Consensus         3 ~~~~~tmkA~v~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~   82 (378)
T 3uko_A            3 QGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVT   82 (378)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             cccceeeEEEEEecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCCCCCCccCCccceEEEEEeCCCCC
Confidence            34578899999999998899999999999999999999999999999999999877677899999999999999999999


Q ss_pred             CCCCCCEEEEeeccCCCCCcccccCcccccccccc---------------------------ccceeeeeeeeccccccc
Q psy7798         177 SVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT---------------------------TQLFLTSNVTISDFNMGY  229 (261)
Q Consensus       177 ~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~g~~~~~~~~~~~~~~~  229 (261)
                      +|++||||++.+...|+.|.+|..+..+.|.....                           .|++.++.++....++++
T Consensus        83 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i  162 (378)
T 3uko_A           83 EVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKI  162 (378)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEEC
T ss_pred             cCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhheEEC
Confidence            99999999998888999999999999999986421                           134555555666788999


Q ss_pred             CCCCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         230 SMTGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       230 ~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      |+++++++||.+++++.|||++|++.+++++
T Consensus       163 P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~  193 (378)
T 3uko_A          163 DPTAPLDKVCLLGCGVPTGLGAVWNTAKVEP  193 (378)
T ss_dssp             CTTSCHHHHGGGGTHHHHHHHHHHTTTCCCT
T ss_pred             CCCCCHHHhhhhhhhHHHHHHHHHhhcCCCC
Confidence            9999999999999999999999998888864

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=99.98  E-value=1.8e-31  Score=241.15  Aligned_cols=165  Identities=47%  Similarity=0.752  Sum_probs=145.2

Q ss_pred             ccCCCcceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCC
Q psy7798          94 MISLPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGE  173 (261)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~  173 (261)
                      |...+.|++||++++.++++++++++++.|.|+++||+|||+++|||++|++++.|.++ ..+|.++|||++|+|+++|+
T Consensus         1 ~~~~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~   79 (373)
T 1p0f_A            1 MCTAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIGA   79 (373)
T ss_dssp             -CCTTSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEEECT
T ss_pred             CcccCCcceeEEEEEEcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC-CCCCcccCcCceEEEEEECC
Confidence            34556788999999999887799999999999999999999999999999999999776 56789999999999999999


Q ss_pred             CCCCCCCCCEEEEeeccCCCCCcccccCcccccccccc--------------------------ccceeeeeeeeccccc
Q psy7798         174 GVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT--------------------------TQLFLTSNVTISDFNM  227 (261)
Q Consensus       174 ~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~g~~~~~~~~~~~~~  227 (261)
                      +|++|++||||++.+..+|+.|.+|..+..+.|.....                          .|++.++.++....++
T Consensus        80 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~  159 (373)
T 1p0f_A           80 GVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVA  159 (373)
T ss_dssp             TCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEE
T ss_pred             CCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchhhEE
Confidence            99999999999998888999999999999999975421                          2455555555667889


Q ss_pred             ccCCCCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         228 GYSMTGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       228 ~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      ++|++++++ ||+++.+++|||++|.+.+++++
T Consensus       160 ~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~  191 (373)
T 1p0f_A          160 KIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTP  191 (373)
T ss_dssp             EECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCT
T ss_pred             ECCCCCChh-hhhhhhHHHHHHHHHHhccCCCC
Confidence            999999999 99999999999999988888764

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=99.97  E-value=2.6e-31  Score=240.39  Aligned_cols=163  Identities=43%  Similarity=0.701  Sum_probs=144.0

Q ss_pred             CCcceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCC
Q psy7798          97 LPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVT  176 (261)
Q Consensus        97 ~~~~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~  176 (261)
                      .+.|++|+++++.++++++++++++.|+|+++||+|||+++|||++|++.+.|. +...+|.++|||++|+|+++|++|+
T Consensus         3 ~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~~~~P~v~GhE~~G~V~~vG~~v~   81 (376)
T 1e3i_A            3 QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKALFPVVLGHECAGIVESVGPGVT   81 (376)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-SCCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             CCCChheeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-CCCCCCcccCccccEEEEEECCCCc
Confidence            356789999999998877999999999999999999999999999999999886 5456789999999999999999999


Q ss_pred             CCCCCCEEEEeeccCCCCCcccccCccccccccc------------------------------cccceeeeeeeecccc
Q psy7798         177 SVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIR------------------------------TTQLFLTSNVTISDFN  226 (261)
Q Consensus       177 ~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~g~~~~~~~~~~~~  226 (261)
                      +|++||||++.+...|+.|.+|..+..+.|....                              ..|+++++.++....+
T Consensus        82 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~  161 (376)
T 1e3i_A           82 NFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL  161 (376)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred             cCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEeccccE
Confidence            9999999999888899999999999999997532                              1145555555556788


Q ss_pred             cccCCCCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         227 MGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       227 ~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      +++|+++++++||+++++++|||++|.+.+++++
T Consensus       162 ~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~  195 (376)
T 1e3i_A          162 ARVDDEANLERVCLIGCGFSSGYGAAINTAKVTP  195 (376)
T ss_dssp             EECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCT
T ss_pred             EECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCC
Confidence            9999999999999999999999999988888764

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=99.97  E-value=3e-31  Score=239.63  Aligned_cols=162  Identities=56%  Similarity=0.875  Sum_probs=144.4

Q ss_pred             cceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCC
Q psy7798          99 QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSV  178 (261)
Q Consensus        99 ~~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~  178 (261)
                      .|++|+++++.++++++++++++.|+|+++||+|||+++|||++|++++.|.++...+|.++|||++|+|+++|++|++|
T Consensus         3 ~p~~mkA~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~   82 (373)
T 2fzw_A            3 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKL   82 (373)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCSC
T ss_pred             CccceEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence            46789999999988789999999999999999999999999999999999987655678999999999999999999999


Q ss_pred             CCCCEEEEeeccCCCCCcccccCccccccccc--------------------------cccceeeeeeeecccccccCCC
Q psy7798         179 APGDHVIPLYIPQCNECKFCKSSKTNLCTKIR--------------------------TTQLFLTSNVTISDFNMGYSMT  232 (261)
Q Consensus       179 ~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~g~~~~~~~~~~~~~~~~~~  232 (261)
                      ++||||++.+..+|+.|.+|..+..+.|....                          ..|++.++.++....++++|++
T Consensus        83 ~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~  162 (373)
T 2fzw_A           83 KAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPL  162 (373)
T ss_dssp             CTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTT
T ss_pred             CCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhheEECCCC
Confidence            99999999888899999999999999997531                          1245555556666888999999


Q ss_pred             CChhhhccccchHHHHHHHHhcccCccc
Q psy7798         233 GSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       233 ~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      +++++||+++++++|||++|.+.+++++
T Consensus       163 l~~~~aa~l~~~~~ta~~~l~~~~~~~~  190 (373)
T 2fzw_A          163 APLDKVCLLGCGISTGYGAAVNTAKLEP  190 (373)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHTTTCCCT
T ss_pred             CCHHHHhhhccHHHHHHHHHHhhcCCCC
Confidence            9999999999999999999988888764

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=99.97  E-value=3.8e-31  Score=239.15  Aligned_cols=162  Identities=43%  Similarity=0.711  Sum_probs=143.8

Q ss_pred             CcceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCC
Q psy7798          98 PQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTS  177 (261)
Q Consensus        98 ~~~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~  177 (261)
                      ..|++|+++++.++++++++++.+.|.|++|||+|||+++|||++|++++.|.++.. +|.++|||++|+|+++|++|++
T Consensus         4 ~~~~~mkA~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~P~v~GhE~~G~V~~vG~~v~~   82 (374)
T 2jhf_A            4 GKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP-LPVIAGHEAAGIVESIGEGVTT   82 (374)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCCC-SSBCCCCSEEEEEEEECTTCCS
T ss_pred             CCceeEEEEEEecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCCC-CCcccCcCceEEEEEECCCCCC
Confidence            457889999999998789999999999999999999999999999999999976643 7899999999999999999999


Q ss_pred             CCCCCEEEEeeccCCCCCcccccCcccccccccc--------------------------ccceeeeeeeecccccccCC
Q psy7798         178 VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT--------------------------TQLFLTSNVTISDFNMGYSM  231 (261)
Q Consensus       178 ~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~g~~~~~~~~~~~~~~~~~  231 (261)
                      |++||||++.+..+|+.|.+|..+..+.|.....                          .|++.++.++....++++|+
T Consensus        83 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~  162 (374)
T 2jhf_A           83 VRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDA  162 (374)
T ss_dssp             CCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCT
T ss_pred             CCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeEECCC
Confidence            9999999998888999999999999999975421                          24555555666678899999


Q ss_pred             CCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         232 TGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       232 ~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      ++++++||+++++++|||++|.+.+++++
T Consensus       163 ~l~~~~aa~l~~~~~ta~~~l~~~~~~~~  191 (374)
T 2jhf_A          163 ASPLEKVCLIGCGFSTGYGSAVKVAKVTQ  191 (374)
T ss_dssp             TCCHHHHGGGGTHHHHHHHHHHTTTCCCT
T ss_pred             CCCHHHhhhhccHHHHHHHHHHhccCCCC
Confidence            99999999999999999999988888764

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=99.97  E-value=3.7e-31  Score=239.22  Aligned_cols=163  Identities=45%  Similarity=0.754  Sum_probs=144.4

Q ss_pred             CCcceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHH-HHcCCCCCCCCCcccccceEEEEEEeCCCC
Q psy7798          97 LPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAY-TLDGLDSEGKFPCVLGHEGSGIVESVGEGV  175 (261)
Q Consensus        97 ~~~~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~-~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v  175 (261)
                      ...+++|+++++.++++++++.+.+.|+|+++||+|||+++|||++|++ ...|.++ ..+|.++|||++|+|+++|++|
T Consensus         3 ~~~~~~mka~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~V   81 (374)
T 1cdo_A            3 VGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK-DGFPVVLGHEGAGIVESVGPGV   81 (374)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT-TSCSEECCCCEEEEEEEECTTC
T ss_pred             CCCcceeEEEEEecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC-CCCCcccCccceEEEEEECCCC
Confidence            3567889999999988789999999999999999999999999999999 8999776 5678999999999999999999


Q ss_pred             CCCCCCCEEEEeeccCCCCCcccccCcccccccccc--------------------------ccceeeeeeeeccccccc
Q psy7798         176 TSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT--------------------------TQLFLTSNVTISDFNMGY  229 (261)
Q Consensus       176 ~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~g~~~~~~~~~~~~~~~  229 (261)
                      ++|++||||++.+..+|+.|.+|..+..+.|.....                          .|++.++.++....++++
T Consensus        82 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~  161 (374)
T 1cdo_A           82 TEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKI  161 (374)
T ss_dssp             CSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEEC
T ss_pred             ccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhheEEC
Confidence            999999999998888999999999999999975421                          145555555566788999


Q ss_pred             CCCCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         230 SMTGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       230 ~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      |+++++++||++++++.|||++|.+.+++++
T Consensus       162 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  192 (374)
T 1cdo_A          162 DPSAPLDTVCLLGCGVSTGFGAAVNTAKVEP  192 (374)
T ss_dssp             CTTCCHHHHGGGGTHHHHHHHHHHTTTCCCT
T ss_pred             CCCCCHHHHhhhccHHHHHHHHHHhccCCCC
Confidence            9999999999999999999999988888764

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=99.97  E-value=7.4e-31  Score=237.00  Aligned_cols=160  Identities=28%  Similarity=0.448  Sum_probs=141.1

Q ss_pred             cceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCC
Q psy7798          99 QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSV  178 (261)
Q Consensus        99 ~~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~  178 (261)
                      .+++||++++.++++++++++++.|+|+++||+|||+++|||++|++.+.|.++ ..+|.++|||++|+|+++|++|++|
T Consensus         3 ~~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~v~~~   81 (371)
T 1f8f_A            3 ELKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTEL   81 (371)
T ss_dssp             -CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCSC
T ss_pred             ccccceEEEEcCCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC-CCCCcccCcccceEEEEeCCCCCCC
Confidence            356799999999887799999999999999999999999999999999999765 4578999999999999999999999


Q ss_pred             CCCCEEEEeeccCCCCCcccccCccccccccc----------------------------cccceeeeeeeecccccccC
Q psy7798         179 APGDHVIPLYIPQCNECKFCKSSKTNLCTKIR----------------------------TTQLFLTSNVTISDFNMGYS  230 (261)
Q Consensus       179 ~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~g~~~~~~~~~~~~~~~~  230 (261)
                      ++||||++.+ ..|+.|.+|..+..+.|....                            ..|++.++.++....++++|
T Consensus        82 ~~GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP  160 (371)
T 1f8f_A           82 QVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVT  160 (371)
T ss_dssp             CTTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEEC
T ss_pred             CCCCEEEecC-CCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEECC
Confidence            9999999988 899999999999999997432                            12455555555557889999


Q ss_pred             CCCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         231 MTGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       231 ~~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      +++++++||++++++.|||++|.+.+++++
T Consensus       161 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~  190 (371)
T 1f8f_A          161 KDVPIELLGPLGCGIQTGAGACINALKVTP  190 (371)
T ss_dssp             TTSCGGGTGGGGTHHHHHHHHHHTTTCCCT
T ss_pred             CCCCHHHHHHhcchHHHHHHHHHhccCCCC
Confidence            999999999999999999999988888764

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=99.97  E-value=2.5e-30  Score=231.61  Aligned_cols=159  Identities=23%  Similarity=0.333  Sum_probs=139.8

Q ss_pred             eeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCC
Q psy7798         101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAP  180 (261)
Q Consensus       101 ~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~v  180 (261)
                      ++|+++++.++++++++++++.|.|++|||+|||+++|||++|++.+.|.++...+|.++|||++|+|+++|++|++|++
T Consensus         3 m~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~v   82 (348)
T 3two_A            3 VQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEIAGIIKEVGKGVKKFKI   82 (348)
T ss_dssp             EEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSCCCSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             eEEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCCCC
Confidence            68999999999888999999999999999999999999999999999998876778999999999999999999999999


Q ss_pred             CCEEEEeec-cCCCCCcccccCccccccccc--------------cccceeeeeeeecccccccCCCCChhhhccccchH
Q psy7798         181 GDHVIPLYI-PQCNECKFCKSSKTNLCTKIR--------------TTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSF  245 (261)
Q Consensus       181 GDrV~~~~~-~~~~~~~~~~~~~~~~~~~~~--------------~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~  245 (261)
                      ||||++.+. ..|+.|.+|..+..+.|....              ..|++.++.++....++++|+++++++||++++++
T Consensus        83 GdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~  162 (348)
T 3two_A           83 GDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAG  162 (348)
T ss_dssp             TCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHH
T ss_pred             CCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhhhhhhhH
Confidence            999987543 689999999999999997211              11555566666668889999999999999999999


Q ss_pred             HHHHHHHhcccCccc
Q psy7798         246 QTTHFAVIKRRDFEK  260 (261)
Q Consensus       246 ~TA~~aL~~~a~L~~  260 (261)
                      +|||++|. .+++++
T Consensus       163 ~ta~~~l~-~~~~~~  176 (348)
T 3two_A          163 ITTYSPLK-FSKVTK  176 (348)
T ss_dssp             HHHHHHHH-HTTCCT
T ss_pred             HHHHHHHH-hcCCCC
Confidence            99999995 446653

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=99.97  E-value=4.9e-30  Score=230.80  Aligned_cols=160  Identities=18%  Similarity=0.172  Sum_probs=138.8

Q ss_pred             ceeeeEEEEecCCCCcEEEE--eeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCC-
Q psy7798         100 VIECKAAVAWEPKKPLSLET--IQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVT-  176 (261)
Q Consensus       100 ~~~~~~~~~~~~g~~l~~~~--~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~-  176 (261)
                      |.+|+++++.++++++++.+  .+.|+|++|||+|||+++|||++|++.+.|.++...+|.++|||++|+|+++|++|+ 
T Consensus         4 p~~mka~~~~~~~~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~GhE~~G~V~~vG~~v~~   83 (360)
T 1piw_A            4 PEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNS   83 (360)
T ss_dssp             TTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTCCS
T ss_pred             ChheEEEEEecCCCCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCCCCCCcccCcCceEEEEEeCCCCCC
Confidence            45799999999887799999  999999999999999999999999999999876556789999999999999999999 


Q ss_pred             CCCCCCEEEEe-eccCCCCCcccccCcccccccc------------ccccceeeeeeeecccccccCCCCChhhhccccc
Q psy7798         177 SVAPGDHVIPL-YIPQCNECKFCKSSKTNLCTKI------------RTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDN  243 (261)
Q Consensus       177 ~~~vGDrV~~~-~~~~~~~~~~~~~~~~~~~~~~------------~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~  243 (261)
                      +|++||||++. ...+|+.|.+|..+..+.|...            ...|++.++.++....++++|+++++++||+++.
T Consensus        84 ~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  163 (360)
T 1piw_A           84 GLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLC  163 (360)
T ss_dssp             SCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCHHHHGGGGT
T ss_pred             CCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCCHHHhhhhhh
Confidence            99999999543 4468999999999999999754            1235555555666688899999999999999999


Q ss_pred             hHHHHHHHHhcccCccc
Q psy7798         244 SFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       244 ~~~TA~~aL~~~a~L~~  260 (261)
                      +++|||++|.. +++++
T Consensus       164 ~~~ta~~~l~~-~~~~~  179 (360)
T 1piw_A          164 GGLTVYSPLVR-NGCGP  179 (360)
T ss_dssp             HHHHHHHHHHH-TTCST
T ss_pred             hHHHHHHHHHH-cCCCC
Confidence            99999999965 67654

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=99.97  E-value=5.9e-30  Score=228.41  Aligned_cols=158  Identities=28%  Similarity=0.382  Sum_probs=139.2

Q ss_pred             eeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCCCC
Q psy7798         102 ECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSVAP  180 (261)
Q Consensus       102 ~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~~v  180 (261)
                      +||++++.++++++++.+.+.|+|++|||+|||+++|||++|++.+.|.++. ..+|.++|||++|+|+++|++|++|++
T Consensus         2 ~MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~v   81 (340)
T 3s2e_A            2 MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKE   81 (340)
T ss_dssp             EEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCSCCT
T ss_pred             ceEEEEEecCCCCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCcCCC
Confidence            4899999998888999999999999999999999999999999999998765 457899999999999999999999999


Q ss_pred             CCEEE-EeeccCCCCCcccccCccccccccc-----cccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhc
Q psy7798         181 GDHVI-PLYIPQCNECKFCKSSKTNLCTKIR-----TTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIK  254 (261)
Q Consensus       181 GDrV~-~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~  254 (261)
                      ||||+ ..+...|+.|.+|..+..+.|....     ..|++.++.++......++|+++++++||+++.+++|||++| +
T Consensus        82 GdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l-~  160 (340)
T 3s2e_A           82 GDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGL-K  160 (340)
T ss_dssp             TCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHHHHH-H
T ss_pred             CCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHHHHH-H
Confidence            99994 5566789999999999999997643     225555555666678899999999999999999999999999 5


Q ss_pred             ccCccc
Q psy7798         255 RRDFEK  260 (261)
Q Consensus       255 ~a~L~~  260 (261)
                      .+++++
T Consensus       161 ~~~~~~  166 (340)
T 3s2e_A          161 VTDTRP  166 (340)
T ss_dssp             TTTCCT
T ss_pred             HcCCCC
Confidence            667654

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=99.97  E-value=3.8e-30  Score=231.53  Aligned_cols=161  Identities=27%  Similarity=0.322  Sum_probs=138.7

Q ss_pred             ceeeeEEEEecCCCCcEEEEeeCCC-CCCCeEEEEEEEEEcChhhHHHHcCCCC---CCCCCcccccceEEEEEEeCCCC
Q psy7798         100 VIECKAAVAWEPKKPLSLETIQVAP-PKAGEVRIKIVSTAICHTDAYTLDGLDS---EGKFPCVLGHEGSGIVESVGEGV  175 (261)
Q Consensus       100 ~~~~~~~~~~~~g~~l~~~~~~~p~-~~~~eVlVkV~a~gln~~Dv~~~~g~~~---~~~~p~~lG~E~~G~V~~vG~~v  175 (261)
                      +++|+++++.++++++++++.|.|+ |++|||+|||+++|||++|++.+.|.++   ...+|.++|||++|+|+++|++|
T Consensus        13 ~~~mka~~~~~~g~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v   92 (359)
T 1h2b_A           13 VERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGV   92 (359)
T ss_dssp             ----CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTC
T ss_pred             hhhceEEEEecCCCCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECCCC
Confidence            4579999999988779999999999 9999999999999999999999999765   34678999999999999999999


Q ss_pred             CCCCCCCEEEEeeccCCCCCcccccCccccccccc-----cccceeeeeeeecccccccCCCCChhhhc---cccchHHH
Q psy7798         176 TSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIR-----TTQLFLTSNVTISDFNMGYSMTGSLERGS---KRDNSFQT  247 (261)
Q Consensus       176 ~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~s~~eaA---~lp~~~~T  247 (261)
                      ++|++||||++....+|+.|.+|..+..+.|+...     ..|++.++.++....++++|+++++++||   +++++++|
T Consensus        93 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~~~~t  172 (359)
T 1h2b_A           93 EGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGIT  172 (359)
T ss_dssp             CSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGGGGTHHHH
T ss_pred             CCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHhEEECCCCCCHHHHhhccchhhhHHH
Confidence            99999999988888899999999999999998642     23555555566668889999999999999   89999999


Q ss_pred             HHHHHhcc-cCccc
Q psy7798         248 THFAVIKR-RDFEK  260 (261)
Q Consensus       248 A~~aL~~~-a~L~~  260 (261)
                      ||++|.+. +++++
T Consensus       173 a~~al~~~~~~~~~  186 (359)
T 1h2b_A          173 AYRAVKKAARTLYP  186 (359)
T ss_dssp             HHHHHHHHHTTCCT
T ss_pred             HHHHHHhhccCCCC
Confidence            99999765 77754

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=99.97  E-value=8.2e-30  Score=227.94  Aligned_cols=157  Identities=22%  Similarity=0.319  Sum_probs=137.2

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC--CCCCcccccceEEEEEEeCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE--GKFPCVLGHEGSGIVESVGEGVTSVAP  180 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~--~~~p~~lG~E~~G~V~~vG~~v~~~~v  180 (261)
                      ||++++.++++++++.+.+.|.|++|||+|||+++|||++|++.+.|.++.  ..+|.++|||++|+|+++|++|++|++
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v   80 (345)
T 3jv7_A            1 MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGV   80 (345)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEcCCCCceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCCCC
Confidence            789999999988999999999999999999999999999999999997652  457899999999999999999999999


Q ss_pred             CCEEEEeeccCCCCCcccccCccccc----------cccccccceeeeeeee-cccccccCCCCChhhhccccchHHHHH
Q psy7798         181 GDHVIPLYIPQCNECKFCKSSKTNLC----------TKIRTTQLFLTSNVTI-SDFNMGYSMTGSLERGSKRDNSFQTTH  249 (261)
Q Consensus       181 GDrV~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~g~~~~~~~~-~~~~~~~~~~~s~~eaA~lp~~~~TA~  249 (261)
                      ||||++.+...|+.|.+|..+..+.|          ......|++.++.++. .....++|+ +++++||+++.+++|||
T Consensus        81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~~ta~  159 (345)
T 3jv7_A           81 GDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAGLTPY  159 (345)
T ss_dssp             TCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTTHHHH
T ss_pred             CCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhhhHHHHH
Confidence            99999998889999999999999999          2233335555555555 567788889 99999999999999999


Q ss_pred             HHHhc-ccCccc
Q psy7798         250 FAVIK-RRDFEK  260 (261)
Q Consensus       250 ~aL~~-~a~L~~  260 (261)
                      ++|.+ .+++++
T Consensus       160 ~~l~~~~~~~~~  171 (345)
T 3jv7_A          160 HAISRVLPLLGP  171 (345)
T ss_dssp             HHHHTTGGGCCT
T ss_pred             HHHHHhccCCCC
Confidence            99987 456653

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=99.97  E-value=1e-29  Score=227.19  Aligned_cols=158  Identities=27%  Similarity=0.433  Sum_probs=139.2

Q ss_pred             eeEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         103 CKAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       103 ~~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      |+++++.+++.+  +++.+.+.|.|++|||+|||+++|||++|++...|.++. ..+|.++|||++|+|+++|++|++|+
T Consensus         1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFA   80 (343)
T ss_dssp             CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSCC
T ss_pred             CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCCC
Confidence            688999888865  889999999999999999999999999999999997753 35789999999999999999999999


Q ss_pred             CCCEEEEeeccCCCCCcccccCccccccccc-----cccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhc
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIR-----TTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIK  254 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~  254 (261)
                      +||||+..+..+|+.|.+|..+..+.|....     ..|++.++.++.....+++|+++++++||+++.+++|||++|.+
T Consensus        81 vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~al~~  160 (343)
T 2eih_A           81 PGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVD  160 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHHHTT
T ss_pred             CCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHHHHH
Confidence            9999998888899999999999999998643     22555555566667889999999999999999999999999987


Q ss_pred             ccCccc
Q psy7798         255 RRDFEK  260 (261)
Q Consensus       255 ~a~L~~  260 (261)
                      .+++++
T Consensus       161 ~~~~~~  166 (343)
T 2eih_A          161 KLGVRP  166 (343)
T ss_dssp             TSCCCT
T ss_pred             hcCCCC
Confidence            777764

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=99.97  E-value=2.6e-29  Score=224.93  Aligned_cols=160  Identities=23%  Similarity=0.297  Sum_probs=138.0

Q ss_pred             ceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCC
Q psy7798         100 VIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSV  178 (261)
Q Consensus       100 ~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~  178 (261)
                      |.+|+++++.+++.++++++.+.|.|++|||+|||+++|||++|++.+.|.++. ..+|.++|||++|+|+++|++|++|
T Consensus         3 p~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~   82 (347)
T 2hcy_A            3 PETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGW   82 (347)
T ss_dssp             CSEEEEEEESSTTCCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTTCCSC
T ss_pred             CcccEEEEEeCCCCCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCCCCCC
Confidence            457999999999877999999999999999999999999999999999997653 4578999999999999999999999


Q ss_pred             CCCCEEEEeec-cCCCCCcccccCccccccccc-----cccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHH
Q psy7798         179 APGDHVIPLYI-PQCNECKFCKSSKTNLCTKIR-----TTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAV  252 (261)
Q Consensus       179 ~vGDrV~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL  252 (261)
                      ++||||++.+. ..|+.|.+|..+..+.|....     ..|++.++.++....++++|+++++++||+++.+++|||++|
T Consensus        83 ~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l  162 (347)
T 2hcy_A           83 KIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKAL  162 (347)
T ss_dssp             CTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHHHHHHH
T ss_pred             cCCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHHHHHHHH
Confidence            99999987653 469999999999999998542     225555555666678899999999999999999999999999


Q ss_pred             hcccCccc
Q psy7798         253 IKRRDFEK  260 (261)
Q Consensus       253 ~~~a~L~~  260 (261)
                      ... ++++
T Consensus       163 ~~~-~~~~  169 (347)
T 2hcy_A          163 KSA-NLMA  169 (347)
T ss_dssp             HTT-TCCT
T ss_pred             Hhc-CCCC
Confidence            643 6653

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=99.96  E-value=6.3e-29  Score=223.36  Aligned_cols=161  Identities=23%  Similarity=0.258  Sum_probs=137.8

Q ss_pred             CcceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCC
Q psy7798          98 PQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTS  177 (261)
Q Consensus        98 ~~~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~  177 (261)
                      ..+|+|+++...++.+.+++.+++.|.|++|||+|||+++|||++|++...|.++...+|.++|||++|+|+++|++|++
T Consensus         5 ~~~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~~   84 (357)
T 2cf5_A            5 EAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSK   84 (357)
T ss_dssp             -CCCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTCCCSSBCCCCEEEEEEEEECSSCCS
T ss_pred             cCcceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCCCCCCeecCcceeEEEEEECCCCCC
Confidence            34578899988887777999999999999999999999999999999999997765567899999999999999999999


Q ss_pred             CCCCCEEEEee-ccCCCCCcccccCccccccccc------------cccceeeeeeeecccccccCCCCChhhhccccch
Q psy7798         178 VAPGDHVIPLY-IPQCNECKFCKSSKTNLCTKIR------------TTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNS  244 (261)
Q Consensus       178 ~~vGDrV~~~~-~~~~~~~~~~~~~~~~~~~~~~------------~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~  244 (261)
                      |++||||++.+ ..+|+.|.+|..+..+.|....            ..|++.++.++.....+++|+++++++||+++++
T Consensus        85 ~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~  164 (357)
T 2cf5_A           85 FTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCA  164 (357)
T ss_dssp             CCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGGTH
T ss_pred             CCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhhhhhh
Confidence            99999998643 3589999999999999996431            2355555556666888999999999999999999


Q ss_pred             HHHHHHHHhcccCcc
Q psy7798         245 FQTTHFAVIKRRDFE  259 (261)
Q Consensus       245 ~~TA~~aL~~~a~L~  259 (261)
                      ++|||++|.. ++++
T Consensus       165 ~~ta~~~l~~-~~~~  178 (357)
T 2cf5_A          165 GVTVYSPLSH-FGLK  178 (357)
T ss_dssp             HHHHHHHHHH-TSTT
T ss_pred             HHHHHHHHHh-cCCC
Confidence            9999999954 5554

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=99.96  E-value=5.9e-29  Score=224.65  Aligned_cols=161  Identities=25%  Similarity=0.344  Sum_probs=137.0

Q ss_pred             cceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCC
Q psy7798          99 QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSV  178 (261)
Q Consensus        99 ~~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~  178 (261)
                      ..++|+++...++++.+++.++|.|+|++|||+|||+++|||++|++.+.|.++...+|.++|||++|+|+++|++|++|
T Consensus        19 ~~~~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~   98 (369)
T 1uuf_A           19 AGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKY   98 (369)
T ss_dssp             ----CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             cCceEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCCCCCCeecccCceEEEEEECCCCCCC
Confidence            34678999888777789999999999999999999999999999999999977655678999999999999999999999


Q ss_pred             CCCCEEEEeec-cCCCCCcccccCcccccccc-------------ccccceeeeeeeecccccccCCC-CChhhhccccc
Q psy7798         179 APGDHVIPLYI-PQCNECKFCKSSKTNLCTKI-------------RTTQLFLTSNVTISDFNMGYSMT-GSLERGSKRDN  243 (261)
Q Consensus       179 ~vGDrV~~~~~-~~~~~~~~~~~~~~~~~~~~-------------~~~~g~~~~~~~~~~~~~~~~~~-~s~~eaA~lp~  243 (261)
                      ++||||++.+. ..|+.|.+|..+..+.|...             ...|+++++.++....+.++|++ +++++||+++.
T Consensus        99 ~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l~~  178 (369)
T 1uuf_A           99 APGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLC  178 (369)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHGGGGT
T ss_pred             CCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhhhhhh
Confidence            99999987654 47999999999999999854             12355555556666788999999 99999999999


Q ss_pred             hHHHHHHHHhcccCccc
Q psy7798         244 SFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       244 ~~~TA~~aL~~~a~L~~  260 (261)
                      +++|||++|.. +++++
T Consensus       179 ~~~tA~~al~~-~~~~~  194 (369)
T 1uuf_A          179 AGITTYSPLRH-WQAGP  194 (369)
T ss_dssp             HHHHHHHHHHH-TTCCT
T ss_pred             hHHHHHHHHHh-cCCCC
Confidence            99999999965 46653

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=99.96  E-value=4.5e-29  Score=223.46  Aligned_cols=156  Identities=24%  Similarity=0.310  Sum_probs=124.7

Q ss_pred             eeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcC-CCC--CCCCCcccccceEEEEEEeCCCCCC
Q psy7798         101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDG-LDS--EGKFPCVLGHEGSGIVESVGEGVTS  177 (261)
Q Consensus       101 ~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g-~~~--~~~~p~~lG~E~~G~V~~vG~~v~~  177 (261)
                      ++||++++.+++..+++.+.|.|.|++|||+|||+++|||++|++.+.| .++  ...+|.++|||++|+|+++|++|++
T Consensus         3 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   82 (348)
T 2d8a_A            3 EKMVAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEG   82 (348)
T ss_dssp             CEEEEEEECSSSSSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCCS
T ss_pred             CcceEEEEECCCCCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCCc
Confidence            3699999998886699999999999999999999999999999999998 443  2456899999999999999999999


Q ss_pred             CCCCCEEEEeeccCCCCCcccccCccccccccc-----cccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHH
Q psy7798         178 VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIR-----TTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAV  252 (261)
Q Consensus       178 ~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL  252 (261)
                      |++||||++.+...|+.|.+|..+..+.|....     ..|++.++.++....++++|+++++++||.++ .++|||++|
T Consensus        83 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~-~~~ta~~~l  161 (348)
T 2d8a_A           83 IEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQE-PLGNAVDTV  161 (348)
T ss_dssp             CCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHH-HHHHHHHHH
T ss_pred             CCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHHeEECCCCCCHHHHHhhh-HHHHHHHHH
Confidence            999999999888899999999999999998643     23556666666668889999999999999885 889999999


Q ss_pred             hcccCc
Q psy7798         253 IKRRDF  258 (261)
Q Consensus       253 ~~~a~L  258 (261)
                       +.+++
T Consensus       162 -~~~~~  166 (348)
T 2d8a_A          162 -LAGPI  166 (348)
T ss_dssp             -TTSCC
T ss_pred             -HhcCC
Confidence             66665

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=99.96  E-value=7.9e-29  Score=221.19  Aligned_cols=157  Identities=29%  Similarity=0.417  Sum_probs=135.5

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      ||++++.++++++++++.|.|+|++|||+|||+++|||++|++.+.|.++. ..+|.++|||++|+|+++|++|++|++|
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~vG   80 (339)
T 1rjw_A            1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG   80 (339)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcCCCC
Confidence            688999888867999999999999999999999999999999999997653 4578999999999999999999999999


Q ss_pred             CEEEEeec-cCCCCCcccccCccccccccc-----cccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcc
Q psy7798         182 DHVIPLYI-PQCNECKFCKSSKTNLCTKIR-----TTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKR  255 (261)
Q Consensus       182 DrV~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~  255 (261)
                      |||++.+. ..|+.|.+|..+..+.|....     ..|++.++.++.....+++|+++++++||+++.+++|||++|...
T Consensus        81 drV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~  160 (339)
T 1rjw_A           81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVT  160 (339)
T ss_dssp             CEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHHHHH
T ss_pred             CEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHHHHHhc
Confidence            99987553 469999999999999997542     225555666666688899999999999999999999999999643


Q ss_pred             cCccc
Q psy7798         256 RDFEK  260 (261)
Q Consensus       256 a~L~~  260 (261)
                       ++++
T Consensus       161 -~~~~  164 (339)
T 1rjw_A          161 -GAKP  164 (339)
T ss_dssp             -TCCT
T ss_pred             -CCCC
Confidence             6553

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=99.96  E-value=5.2e-29  Score=222.96  Aligned_cols=156  Identities=27%  Similarity=0.351  Sum_probs=135.7

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCC--------CCCCCcccccceEEEEEEeCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDS--------EGKFPCVLGHEGSGIVESVGEG  174 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~--------~~~~p~~lG~E~~G~V~~vG~~  174 (261)
                      |+++++.++++++++.+.|.|+|+++||+|||.++|||++|++.+.|.++        ...+|.++|||++|+|+++|++
T Consensus         1 Mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   80 (347)
T 1jvb_A            1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (347)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCC
Confidence            68899999887799999999999999999999999999999999988655        2357899999999999999999


Q ss_pred             CCCCCCCCEEEEeeccCCCCCcccccCccccccccc-----cccceeeeeeeec-ccccccCCCCChhhhccccchHHHH
Q psy7798         175 VTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIR-----TTQLFLTSNVTIS-DFNMGYSMTGSLERGSKRDNSFQTT  248 (261)
Q Consensus       175 v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~~-~~~~~~~~~~s~~eaA~lp~~~~TA  248 (261)
                      |++|++||||++.+..+|+.|.+|..+..+.|+...     ..|++.++.++.. ....++ +++++++||+++++++||
T Consensus        81 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~~ta  159 (347)
T 1jvb_A           81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSGITT  159 (347)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHHHHH
T ss_pred             CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccceEEe-CCCCHHHcccchhhHHHH
Confidence            999999999988877899999999999999998643     2245555555555 678888 999999999999999999


Q ss_pred             HHHHhcccCccc
Q psy7798         249 HFAVIKRRDFEK  260 (261)
Q Consensus       249 ~~aL~~~a~L~~  260 (261)
                      |++|. .+++++
T Consensus       160 ~~~l~-~~~~~~  170 (347)
T 1jvb_A          160 YRAVR-KASLDP  170 (347)
T ss_dssp             HHHHH-HTTCCT
T ss_pred             HHHHH-hcCCCC
Confidence            99995 477654

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=99.96  E-value=4.2e-29  Score=223.23  Aligned_cols=155  Identities=25%  Similarity=0.331  Sum_probs=135.5

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCC---CCCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDS---EGKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~---~~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      ||++++.++++++++.++|.|.|++|||+|||+++|||++|++...|.++   ...+|.++|||++|+|+++|++|++|+
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2dq4_A            1 MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQ   80 (343)
T ss_dssp             CEEEEECSSSSSCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCSSC
T ss_pred             CeEEEEeCCCCcEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCcCC
Confidence            68899988887799999999999999999999999999999999999765   245789999999999999999999999


Q ss_pred             CCCEEEEeeccCCCCCcccccCccccccccc-----cccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhc
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIR-----TTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIK  254 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~  254 (261)
                      +||||++.+...|+.|.+|..+..+.|....     ..|++.++.++.....+++|+++++++||.+ ..+.|||++|.+
T Consensus        81 vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~~l~~  159 (343)
T 2dq4_A           81 VGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAIL-EPFGNAVHTVYA  159 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTH-HHHHHHHHHHHS
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHHeEECCCCCCHHHHHhh-hHHHHHHHHHHH
Confidence            9999999888899999999999999998643     2255555556666888999999999999987 578899999965


Q ss_pred             ccCc
Q psy7798         255 RRDF  258 (261)
Q Consensus       255 ~a~L  258 (261)
                      .+++
T Consensus       160 ~~~~  163 (343)
T 2dq4_A          160 GSGV  163 (343)
T ss_dssp             TTCC
T ss_pred             hCCC
Confidence            6665

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=99.96  E-value=9.3e-29  Score=221.08  Aligned_cols=152  Identities=26%  Similarity=0.396  Sum_probs=130.1

Q ss_pred             eeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCC--CCCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         102 ECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDS--EGKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       102 ~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~--~~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      +|+++++.++++++++.+.+.|.|++|||+|||+++|||++|++...|.++  ...+|.++|||++|+|+++|++ ++|+
T Consensus         3 ~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~~~   81 (344)
T 2h6e_A            3 KSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AKVK   81 (344)
T ss_dssp             EEEBCEECSCCC-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CCCC
T ss_pred             eeEEEEEecCCCCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CCCC
Confidence            689999999887799999999999999999999999999999999999776  3467899999999999999999 9999


Q ss_pred             CCCEEEEeeccCCCCCcccccCccccccccc-----cccceeeeeeee-cccccccCCCCChhhhccccchHHHHHHHHh
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIR-----TTQLFLTSNVTI-SDFNMGYSMTGSLERGSKRDNSFQTTHFAVI  253 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~-~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~  253 (261)
                      +||||++....+|+.|.+|..+..+.|....     ..|++.++.++. ...++++ +++++++||+++++++|||++|.
T Consensus        82 ~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~~al~  160 (344)
T 2h6e_A           82 KGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSMGAIR  160 (344)
T ss_dssp             TTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHHHHHH
Confidence            9999988877899999999999999998642     235565666666 6778888 99999999999999999999996


Q ss_pred             cc
Q psy7798         254 KR  255 (261)
Q Consensus       254 ~~  255 (261)
                      ..
T Consensus       161 ~~  162 (344)
T 2h6e_A          161 QA  162 (344)
T ss_dssp             HH
T ss_pred             hh
Confidence            54

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=99.96  E-value=1e-28  Score=223.11  Aligned_cols=159  Identities=22%  Similarity=0.316  Sum_probs=139.5

Q ss_pred             CcceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCC
Q psy7798          98 PQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTS  177 (261)
Q Consensus        98 ~~~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~  177 (261)
                      ..|++||++++.+++. +++++++.|.|++|||+|||+|+|||++|++.+.|.++ ..+|.++|||++|+|+++|++|++
T Consensus        19 ~~p~~mkA~v~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~p~v~G~e~~G~V~~vG~~v~~   96 (370)
T 4ej6_A           19 YFQSMMKAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFP-STPPVTLGHEFCGIVVEAGSAVRD   96 (370)
T ss_dssp             --CCEEEEEEEEETTE-EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSEECCCSEEEEEEEECTTCCS
T ss_pred             ccchheEEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCCC-CCCCeecCcceEEEEEEECCCCCC
Confidence            4567899999998864 99999999999999999999999999999999999875 457899999999999999999999


Q ss_pred             CCCCCEEEEeeccCCCCCcccccCcccccccccc-----ccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHH
Q psy7798         178 VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT-----TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAV  252 (261)
Q Consensus       178 ~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL  252 (261)
                      |++||||++.+...|+.|.+|..+..+.|.....     .|++.++.++....++++|+++++++|| ++.+++|||++|
T Consensus        97 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-l~~~~~ta~~~l  175 (370)
T 4ej6_A           97 IAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-FCEPLACCLHGV  175 (370)
T ss_dssp             SCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-GHHHHHHHHHHH
T ss_pred             CCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhhEEECCCCCCHHHHh-hhhHHHHHHHHH
Confidence            9999999998889999999999999999986432     2555566666668889999999999998 888999999999


Q ss_pred             hcccCccc
Q psy7798         253 IKRRDFEK  260 (261)
Q Consensus       253 ~~~a~L~~  260 (261)
                       +.+++++
T Consensus       176 -~~~~~~~  182 (370)
T 4ej6_A          176 -DLSGIKA  182 (370)
T ss_dssp             -HHHTCCT
T ss_pred             -HhcCCCC
Confidence             7788764

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=99.96  E-value=3.4e-28  Score=219.39  Aligned_cols=159  Identities=21%  Similarity=0.268  Sum_probs=134.5

Q ss_pred             ceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         100 VIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       100 ~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      +|+++++...+.++.+++.+++.|.|++|||+|||.++|||++|++.+.|.++...+|.++|||++|+|+++|++|++|+
T Consensus        14 ~mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~~   93 (366)
T 1yqd_A           14 PVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTEVGSKVKKVN   93 (366)
T ss_dssp             SEEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSCCCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             CeeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCCCCCCEecccceEEEEEEECCCCCcCC
Confidence            35666666666666799999999999999999999999999999999999776556789999999999999999999999


Q ss_pred             CCCEEEEee-ccCCCCCcccccCccccccccc------------cccceeeeeeeecccccccCCCCChhhhccccchHH
Q psy7798         180 PGDHVIPLY-IPQCNECKFCKSSKTNLCTKIR------------TTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQ  246 (261)
Q Consensus       180 vGDrV~~~~-~~~~~~~~~~~~~~~~~~~~~~------------~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~  246 (261)
                      +||||++.+ ...|+.|.+|..+..+.|....            ..|++.++.++....++++|+++++++||+++++++
T Consensus        94 vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~  173 (366)
T 1yqd_A           94 VGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGI  173 (366)
T ss_dssp             TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGTHHH
T ss_pred             CCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhhhhHH
Confidence            999998643 3589999999999999996431            235555666666688899999999999999999999


Q ss_pred             HHHHHHhcccCcc
Q psy7798         247 TTHFAVIKRRDFE  259 (261)
Q Consensus       247 TA~~aL~~~a~L~  259 (261)
                      |||++|.. ++++
T Consensus       174 ta~~al~~-~~~~  185 (366)
T 1yqd_A          174 TVYSPLKY-FGLD  185 (366)
T ss_dssp             HHHHHHHH-TTCC
T ss_pred             HHHHHHHh-cCcC
Confidence            99999964 4444

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=99.96  E-value=1.8e-28  Score=220.62  Aligned_cols=158  Identities=22%  Similarity=0.231  Sum_probs=135.6

Q ss_pred             cceeeeEEEEecCCCCcEEEEeeCC--------CCCCCeEEEEEEEEEcChhhHHHHcCC-CC--CCCCCcccccceEEE
Q psy7798          99 QVIECKAAVAWEPKKPLSLETIQVA--------PPKAGEVRIKIVSTAICHTDAYTLDGL-DS--EGKFPCVLGHEGSGI  167 (261)
Q Consensus        99 ~~~~~~~~~~~~~g~~l~~~~~~~p--------~~~~~eVlVkV~a~gln~~Dv~~~~g~-~~--~~~~p~~lG~E~~G~  167 (261)
                      .+++|+++++.+++. +++.+.|.|        .|++|||+|||+++|||++|++.+.|. ++  ...+|.++|||++|+
T Consensus         5 ~~~~mka~~~~~~~~-l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G~   83 (363)
T 3m6i_A            5 ASKTNIGVFTNPQHD-LWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGE   83 (363)
T ss_dssp             CCSCCEEEEECTTCC-EEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEEE
T ss_pred             CcccceeEEEeCCCc-EEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEEE
Confidence            457899999987655 999999999        999999999999999999999988732 21  135689999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEeeccCCCCCcccccCccccccccc------cccceeeeeeeecccccccCCCCChhhhccc
Q psy7798         168 VESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIR------TTQLFLTSNVTISDFNMGYSMTGSLERGSKR  241 (261)
Q Consensus       168 V~~vG~~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~l  241 (261)
                      |+++|++|++|++||||++.+..+|+.|.+|..+..+.|....      ..|++.++.++....++++|+ +++++||.+
T Consensus        84 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-~s~~~aa~~  162 (363)
T 3m6i_A           84 VIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYENGAML  162 (363)
T ss_dssp             EEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-CCHHHHHHH
T ss_pred             EEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-CCHHHHHhh
Confidence            9999999999999999999888899999999999999998753      234555555666688889999 999999988


Q ss_pred             cchHHHHHHHHhcccCccc
Q psy7798         242 DNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       242 p~~~~TA~~aL~~~a~L~~  260 (261)
                       ..+.|||++| +.+++++
T Consensus       163 -~~~~ta~~~l-~~~~~~~  179 (363)
T 3m6i_A          163 -EPLSVALAGL-QRAGVRL  179 (363)
T ss_dssp             -HHHHHHHHHH-HHHTCCT
T ss_pred             -hHHHHHHHHH-HHcCCCC
Confidence             5889999999 7788764

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=99.96  E-value=3.1e-28  Score=217.61  Aligned_cols=156  Identities=25%  Similarity=0.365  Sum_probs=134.2

Q ss_pred             eeEEEEecC-CCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCC
Q psy7798         103 CKAAVAWEP-KKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       103 ~~~~~~~~~-g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      ||++++... .+.+++.+.|.|+|+||||+|||+|+|||++|++++.|.++ ..+|.++|||++|+|+++|++|++|++|
T Consensus         1 MKA~v~~~~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~-~~~p~i~GhE~aG~V~~vG~~V~~~~~G   79 (348)
T 4eez_A            1 MKAAVVRHNPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFG-NKAGTVLGHEGIGIVKEIGADVSSLQVG   79 (348)
T ss_dssp             CEEEEECSSCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTC-CCTTCBCCSEEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEEcCCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCC-CCCCcccceeEEEEEEEECceeeecccC
Confidence            788888644 35699999999999999999999999999999999999886 4678999999999999999999999999


Q ss_pred             CEEEEeec-cCCCCCcccccCcccccccccc-----ccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcc
Q psy7798         182 DHVIPLYI-PQCNECKFCKSSKTNLCTKIRT-----TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKR  255 (261)
Q Consensus       182 DrV~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~  255 (261)
                      |||++.+. ..|+.|.+|..+..+.|.....     .|++..+.+.+...+.++|+++++++||+++.+++|||++| +.
T Consensus        80 drV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l-~~  158 (348)
T 4eez_A           80 DRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAI-KV  158 (348)
T ss_dssp             CEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHHHH-HH
T ss_pred             CeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEeee-cc
Confidence            99987654 5679999999999999976532     24555666666688999999999999999999999999998 45


Q ss_pred             cCccc
Q psy7798         256 RDFEK  260 (261)
Q Consensus       256 a~L~~  260 (261)
                      +++++
T Consensus       159 ~~~~~  163 (348)
T 4eez_A          159 SGVKP  163 (348)
T ss_dssp             HTCCT
T ss_pred             cCCCC
Confidence            66553

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=99.96  E-value=2.9e-28  Score=218.47  Aligned_cols=155  Identities=15%  Similarity=0.149  Sum_probs=134.9

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHH-HHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAY-TLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~-~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      ||++++.++++ +++.+.|.|.|++|||+|||+++|||++|++ ...|.++ ..+|.++|||++|+|+++|++|++|++|
T Consensus         1 MkA~~~~~~~~-~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~p~v~G~E~~G~V~~vG~~v~~~~vG   78 (352)
T 3fpc_A            1 MKGFAMLSIGK-VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG-ERHNMILGHEAVGEVVEVGSEVKDFKPG   78 (352)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTC-CCSSEECCCEEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEccCCC-ceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCC-CCCCcccCCcceEEEEEECCCCCcCCCC
Confidence            78999998887 8899999999999999999999999999999 5688776 3568999999999999999999999999


Q ss_pred             CEEEEeeccCCCCCcccccCcccccccccc-------ccceeeeeeeec-c--cccccCCCCChhhhccccchHHHHHHH
Q psy7798         182 DHVIPLYIPQCNECKFCKSSKTNLCTKIRT-------TQLFLTSNVTIS-D--FNMGYSMTGSLERGSKRDNSFQTTHFA  251 (261)
Q Consensus       182 DrV~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~-~--~~~~~~~~~s~~eaA~lp~~~~TA~~a  251 (261)
                      |||++.+...|+.|.+|..+..+.|.....       ..|.+++|+.++ .  ..+++|+++++++||+++.+++|||++
T Consensus        79 drV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~a  158 (352)
T 3fpc_A           79 DRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHG  158 (352)
T ss_dssp             CEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHHHHHHHH
T ss_pred             CEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchhHHHHHH
Confidence            999998888999999999999888864321       235556666555 3  688999999999999999999999999


Q ss_pred             HhcccCccc
Q psy7798         252 VIKRRDFEK  260 (261)
Q Consensus       252 L~~~a~L~~  260 (261)
                      | +.+++++
T Consensus       159 l-~~~~~~~  166 (352)
T 3fpc_A          159 A-ELANIKL  166 (352)
T ss_dssp             H-HHTTCCT
T ss_pred             H-HhcCCCC
Confidence            9 7777764

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=99.96  E-value=3e-28  Score=218.43  Aligned_cols=157  Identities=29%  Similarity=0.443  Sum_probs=133.6

Q ss_pred             eeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHc-CCCCC--CCCCcccccceEEEEEEeCCCCCC
Q psy7798         101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLD-GLDSE--GKFPCVLGHEGSGIVESVGEGVTS  177 (261)
Q Consensus       101 ~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~-g~~~~--~~~p~~lG~E~~G~V~~vG~~v~~  177 (261)
                      ++||++++.+++ .+++.+.+.|+|++|||+|||+++|||++|++.+. |.++.  ..+|.++|||++|+|+++|++|++
T Consensus         3 ~~mka~~~~~~~-~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   81 (352)
T 1e3j_A            3 SDNLSAVLYKQN-DLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKH   81 (352)
T ss_dssp             -CCEEEEEEETT-EEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCS
T ss_pred             ccCEEEEEEcCC-cEEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCCC
Confidence            468999998876 48999999999999999999999999999999887 43321  346899999999999999999999


Q ss_pred             CCCCCEEEEeeccCCCCCcccccCccccccccc------cccceeeeeeeecccccccCCCCChhhhccccchHHHHHHH
Q psy7798         178 VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIR------TTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFA  251 (261)
Q Consensus       178 ~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~a  251 (261)
                      |++||||++.+...|+.|.+|..+..+.|....      ..|++.++.++....++++|+++++++||.+ ..++|||++
T Consensus        82 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~a  160 (352)
T 1e3j_A           82 LKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALL-EPLSVGVHA  160 (352)
T ss_dssp             CCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH-HHHHHHHHH
T ss_pred             CCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhh-chHHHHHHH
Confidence            999999999888899999999999999998643      2355555656666888999999999999865 688999999


Q ss_pred             HhcccCccc
Q psy7798         252 VIKRRDFEK  260 (261)
Q Consensus       252 L~~~a~L~~  260 (261)
                      | +.+++++
T Consensus       161 l-~~~~~~~  168 (352)
T 1e3j_A          161 C-RRAGVQL  168 (352)
T ss_dssp             H-HHHTCCT
T ss_pred             H-HhcCCCC
Confidence            9 6777764

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=99.95  E-value=4.5e-28  Score=219.59  Aligned_cols=157  Identities=24%  Similarity=0.355  Sum_probs=135.3

Q ss_pred             eeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCC----
Q psy7798         101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVT----  176 (261)
Q Consensus       101 ~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~----  176 (261)
                      .+||++++.++++.+++.+.+.|.|++|||+|||+++|||++|++.+.|.++...+|.++|||++|+|+++| +|+    
T Consensus        16 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~P~v~GhE~~G~V~~vG-~V~~~~~   94 (380)
T 1vj0_A           16 LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVN-GEKRDLN   94 (380)
T ss_dssp             EEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEES-SCCBCTT
T ss_pred             hheEEEEEecCCCCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCCCCCCcccCcCcEEEEEEeC-Ccccccc
Confidence            479999999998669999999999999999999999999999999999977645678999999999999999 999    


Q ss_pred             --CCCCCCEEEEeeccCCCCCcccc-cCccccccccc-------------cccceeeeeee-ecccccccCCCCChh-hh
Q psy7798         177 --SVAPGDHVIPLYIPQCNECKFCK-SSKTNLCTKIR-------------TTQLFLTSNVT-ISDFNMGYSMTGSLE-RG  238 (261)
Q Consensus       177 --~~~vGDrV~~~~~~~~~~~~~~~-~~~~~~~~~~~-------------~~~g~~~~~~~-~~~~~~~~~~~~s~~-ea  238 (261)
                        +|++||||++.+..+|+.|.+|. .+..+.|....             ..|++.++.++ ....++++|++++++ +|
T Consensus        95 ~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~iP~~l~~~~~A  174 (380)
T 1vj0_A           95 GELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVLA  174 (380)
T ss_dssp             SCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTSCHHHHH
T ss_pred             CCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceEEECCCCCChHHhH
Confidence              99999999998888999999999 99999998532             12445555555 557889999999999 77


Q ss_pred             ccccchHHHHHHHHhcccC-ccc
Q psy7798         239 SKRDNSFQTTHFAVIKRRD-FEK  260 (261)
Q Consensus       239 A~lp~~~~TA~~aL~~~a~-L~~  260 (261)
                      |.++ +++|||++| +.++ +++
T Consensus       175 a~~~-~~~ta~~al-~~~~~~~~  195 (380)
T 1vj0_A          175 MAMC-SGATAYHAF-DEYPESFA  195 (380)
T ss_dssp             HHTT-HHHHHHHHH-HTCSSCCB
T ss_pred             hhhc-HHHHHHHHH-HhcCCCCC
Confidence            7766 999999999 5666 653

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=99.95  E-value=2.7e-28  Score=219.21  Aligned_cols=153  Identities=16%  Similarity=0.151  Sum_probs=132.1

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCC---CcccccceEEEEEEeCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKF---PCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~---p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      ||++++.++++++++.+.|.|.|++|||+|||+++|||++|++++.|.++...+   |.++|||++| |+++|++ ++|+
T Consensus         1 MkA~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G-V~~vG~~-~~~~   78 (357)
T 2b5w_A            1 MKAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVG-VVVDPND-TELE   78 (357)
T ss_dssp             CEEEEEETTCSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTTSCTTCSEEECCSEEEE-EEEECTT-SSCC
T ss_pred             CeEEEEeCCCCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCCCCCCCCCcccCceeEE-EEEECCC-CCCC
Confidence            789999988877999999999999999999999999999999999997664455   8899999999 9999999 9999


Q ss_pred             CCCEEEEeeccC--CCCCcccccCcccccccccc--------ccceeeeeeeecccccccCCCCChhhhccccchHHHHH
Q psy7798         180 PGDHVIPLYIPQ--CNECKFCKSSKTNLCTKIRT--------TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTH  249 (261)
Q Consensus       180 vGDrV~~~~~~~--~~~~~~~~~~~~~~~~~~~~--------~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~  249 (261)
                      +||||++.+...  |+.|.+|..+..+.|.....        .|++.++.++.....+++|++++ + +|+++.+++|||
T Consensus        79 vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~-~aal~~~~~ta~  156 (357)
T 2b5w_A           79 EGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-E-LGFLIEPISITE  156 (357)
T ss_dssp             TTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-T-TGGGHHHHHHHH
T ss_pred             CCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-h-hhhhhchHHHHH
Confidence            999999887666  99999999999999986543        25555555666678899999999 4 567999999999


Q ss_pred             HHHhcccCccc
Q psy7798         250 FAVIKRRDFEK  260 (261)
Q Consensus       250 ~aL~~~a~L~~  260 (261)
                      ++| +.+++++
T Consensus       157 ~al-~~~~~~~  166 (357)
T 2b5w_A          157 KAL-EHAYASR  166 (357)
T ss_dssp             HHH-HHHHHTT
T ss_pred             HHH-HhcCCCC
Confidence            999 6676653

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=99.95  E-value=2.6e-28  Score=219.19  Aligned_cols=157  Identities=26%  Similarity=0.306  Sum_probs=133.9

Q ss_pred             eeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCC-CCC--CCCCcccccceEEEEEEeCCCCCC
Q psy7798         101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL-DSE--GKFPCVLGHEGSGIVESVGEGVTS  177 (261)
Q Consensus       101 ~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~-~~~--~~~p~~lG~E~~G~V~~vG~~v~~  177 (261)
                      |+|+++++.+++ .+++.+.+.|+|++|||+|||+++|||++|++.+.|. .+.  ..+|.++|||++|+|+++|++|++
T Consensus         6 ~~mka~~~~~~~-~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~~   84 (356)
T 1pl8_A            6 PNNLSLVVHGPG-DLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKH   84 (356)
T ss_dssp             CCCEEEEEEETT-EEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCS
T ss_pred             cCceEEEEecCC-cEEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCCC
Confidence            579999998875 4899999999999999999999999999999998742 211  346899999999999999999999


Q ss_pred             CCCCCEEEEeeccCCCCCcccccCccccccccc------cccceeeeeeeecccccccCCCCChhhhccccchHHHHHHH
Q psy7798         178 VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIR------TTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFA  251 (261)
Q Consensus       178 ~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~a  251 (261)
                      |++||||++.+..+|+.|.+|..+..+.|....      ..|++.++.++....++++|+++++++||.+ ..++|||++
T Consensus        85 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~-~~~~ta~~a  163 (356)
T 1pl8_A           85 LKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI-EPLSVGIHA  163 (356)
T ss_dssp             CCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH-HHHHHHHHH
T ss_pred             CCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhh-chHHHHHHH
Confidence            999999999888899999999999999998642      1355555556666888999999999999865 688999999


Q ss_pred             HhcccCccc
Q psy7798         252 VIKRRDFEK  260 (261)
Q Consensus       252 L~~~a~L~~  260 (261)
                      | +.+++++
T Consensus       164 l-~~~~~~~  171 (356)
T 1pl8_A          164 C-RRGGVTL  171 (356)
T ss_dssp             H-HHHTCCT
T ss_pred             H-HhcCCCC
Confidence            9 6777764

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=99.95  E-value=5.1e-28  Score=220.42  Aligned_cols=156  Identities=21%  Similarity=0.257  Sum_probs=134.9

Q ss_pred             eeeEEEEecCCCCcEEEEeeCCCC-CC-----CeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCC
Q psy7798         102 ECKAAVAWEPKKPLSLETIQVAPP-KA-----GEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGV  175 (261)
Q Consensus       102 ~~~~~~~~~~g~~l~~~~~~~p~~-~~-----~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v  175 (261)
                      +||++++.+++ .+++.+++.|.| ++     +||+|||+++|||++|++++.|.++ ..+|.++|||++|+|+++|++|
T Consensus         2 ~MkA~~~~~~~-~l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~-~~~p~v~GhE~~G~V~~vG~~v   79 (398)
T 2dph_A            2 GNKSVVYHGTR-DLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI-VPKGHVLGHEITGEVVEKGSDV   79 (398)
T ss_dssp             CEEEEEEEETT-EEEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC-CCTTCBCCCCEEEEEEEECTTC
T ss_pred             ccEEEEEEcCC-CEEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC-CCCCcccCCceEEEEEEECCCC
Confidence            58999998876 488999999987 68     9999999999999999999999754 4568999999999999999999


Q ss_pred             CCCCCCCEEEEeeccCCCCCcccccCccccccc--cc-------------cccceeeeeeeecc---cccccCCCCChhh
Q psy7798         176 TSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTK--IR-------------TTQLFLTSNVTISD---FNMGYSMTGSLER  237 (261)
Q Consensus       176 ~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~--~~-------------~~~g~~~~~~~~~~---~~~~~~~~~s~~e  237 (261)
                      ++|++||||++.+...|+.|.+|..+..+.|..  ..             ...|.+++|+.++.   .++++|+++++++
T Consensus        80 ~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~  159 (398)
T 2dph_A           80 ELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAME  159 (398)
T ss_dssp             CSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCEECSSHHHHHH
T ss_pred             CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEEECCCCCChhh
Confidence            999999999998888999999999999999986  11             12355566666663   6889999999998


Q ss_pred             ----hccccchHHHHHHHHhcccCccc
Q psy7798         238 ----GSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       238 ----aA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                          ||+++.+++|||++| +.+++++
T Consensus       160 ~~~~aa~l~~~~~ta~~al-~~~~~~~  185 (398)
T 2dph_A          160 KIKDLTLISDILPTGFHGC-VSAGVKP  185 (398)
T ss_dssp             THHHHTTTTTHHHHHHHHH-HHTTCCT
T ss_pred             hcchhhhhcCHHHHHHHHH-HHcCCCC
Confidence                999999999999999 6777764

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.95  E-value=9.8e-29  Score=242.57  Aligned_cols=212  Identities=22%  Similarity=0.204  Sum_probs=162.6

Q ss_pred             ChHHHHhHHHHHHh----HHHHhhhhhcccc-----chhHHhHHHHHHHHHHhcCC------------------------
Q psy7798          21 KDEEFEQFEKKVDN----ISRLIANFSNKDK-----NIAAAAMREAKLLLEDNQHE------------------------   67 (261)
Q Consensus        21 ~~~~~~~~~~~~~~----~~~~~~~~~~~d~-----d~~~~~~~~~~~l~~~~~~~------------------------   67 (261)
                      +++.|+.+|.++..    ...++|.+.+...     +..++..+.+.+|+|.+++|                        
T Consensus        96 ~~~~l~~~q~~l~~~~~~~~~LlwVT~g~~~~~~~~~~~~p~~a~v~GL~Rtlr~E~p~~~~~lDld~~~~~~~~l~~~~  175 (795)
T 3slk_A           96 TRHALDLVQGWLSDQRLNESRLLLVTQGAVAVEPGEPVTDLAQAALWGLLRSTQTEHPDRFVLVDVPEPAQLLPALPGVL  175 (795)
T ss_dssp             HHHHHHHHHHHHHHCSSSSCEEEEEESSCSCCSTTCCCSCHHHHHHHHHHHHHHHHSTTSEEEEECSSTTSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccccCCCcEEEEECCCcccCCCCCCCCHHHHHHHHHHHHHHhcCCCCeEEEECCCCcchHHHHHHhc
Confidence            45667777777664    3567777766431     22334556677777766443                        


Q ss_pred             -CcccceeccccccccchhhhhhhhccccCCCcceeeeEEEEecCCC--CcEEEEee--CCCCCCCeEEEEEEEEEcChh
Q psy7798          68 -DKEARVTHELVSKNTDKLVIRNLCHIMISLPQVIECKAAVAWEPKK--PLSLETIQ--VAPPKAGEVRIKIVSTAICHT  142 (261)
Q Consensus        68 -~~e~e~~~r~~~~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~l~~~~~~--~p~~~~~eVlVkV~a~gln~~  142 (261)
                       ..|.||++|+|.++++|+........  ..+.......+.+..+|.  .|++.+.+  .|+|++|||+|||+++|||++
T Consensus       176 ~~~E~E~a~r~G~~~V~Rl~~~~~~~~--~~~~~~~~~~l~~~~~G~~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~  253 (795)
T 3slk_A          176 ACGEPQLALRRGGAHAPRLAGLGSDDV--LPVPDGTGWRLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFR  253 (795)
T ss_dssp             HTCCSEEEECSSCEECCEEEESCSSCC--CCCCCSSSCCEEESSTTSSTTEEECCCHHHHSCCCSSEEEEEEEEEEECHH
T ss_pred             cCCCceEEEECCcEEEeeeeccccccc--cCCCCCceEEEecCCCCCccceEEEeCCccCCCCCCCEEEEEEEEEccCHH
Confidence             13789999999999999976543211  111223345667777774  38888776  467899999999999999999


Q ss_pred             hHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeee
Q psy7798         143 DAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTI  222 (261)
Q Consensus       143 Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  222 (261)
                      |++++.|.++.   |.++|||++|+|+++|++|++|++||||+++..                       |++.++.++.
T Consensus       254 D~~~~~G~~~~---~~~lG~E~aG~V~~vG~~V~~~~vGDrV~~~~~-----------------------G~~ae~~~v~  307 (795)
T 3slk_A          254 DALIALGMYPG---VASLGSEGAGVVVETGPGVTGLAPGDRVMGMIP-----------------------KAFGPLAVAD  307 (795)
T ss_dssp             HHHHTTTCCSS---CCCSCCCEEEEEEEECSSCCSSCTTCEEEECCS-----------------------SCSSSEEEEE
T ss_pred             HHHHHcCCCCC---CccccceeEEEEEEeCCCCCcCCCCCEEEEEec-----------------------CCCcCEEEee
Confidence            99999998764   457999999999999999999999999988642                       5566666666


Q ss_pred             cccccccCCCCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         223 SDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       223 ~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      ...+.++|++++|++||++|++++|||++|++.+++++
T Consensus       308 ~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~  345 (795)
T 3slk_A          308 HRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRP  345 (795)
T ss_dssp             TTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCT
T ss_pred             hHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCC
Confidence            68889999999999999999999999999999999875

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=99.95  E-value=1.8e-27  Score=212.54  Aligned_cols=154  Identities=23%  Similarity=0.294  Sum_probs=132.6

Q ss_pred             eeEEEEecCCCCcEEEEeeCCC-CCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAP-PKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~-~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      ||+++++++|. +++++.|.|+ ++||||+|||+|+|||++|++.+.|..+ ..+|.++|||++|+|+++|++|++|++|
T Consensus         1 MkAvv~~~~g~-l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~-~~~P~i~G~E~~G~V~~vG~~V~~~~~G   78 (346)
T 4a2c_A            1 MKSVVNDTDGI-VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGA-HYYPITLGHEFSGYIDAVGSGVDDLHPG   78 (346)
T ss_dssp             CEEEEECSSSC-EEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCS-SSSSBCCCCEEEEEEEEECTTCCSCCTT
T ss_pred             CCEEEEecCCC-EEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCC-CCCCccccEEEEEEEEEECCCcccccCC
Confidence            79999998875 9999999998 5799999999999999999999998765 4678999999999999999999999999


Q ss_pred             CEEEEeeccCCCCCcccccCcccccccccc-----ccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhccc
Q psy7798         182 DHVIPLYIPQCNECKFCKSSKTNLCTKIRT-----TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRR  256 (261)
Q Consensus       182 DrV~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a  256 (261)
                      |||++.+...|+.|..|..+..+.|.....     .|+++.+.++....++++|+++++++||.++  .+|+++.+.+.+
T Consensus        79 drV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~--~~~~~~~~~~~~  156 (346)
T 4a2c_A           79 DAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE--PITVGLHAFHLA  156 (346)
T ss_dssp             CEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHH--HHHHHHHHHHHT
T ss_pred             CeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchheEEECCCCCCHHHHHhch--HHHHHHHHHHHh
Confidence            999999888999999999999999986542     2455555566668889999999999999765  456666666777


Q ss_pred             Cccc
Q psy7798         257 DFEK  260 (261)
Q Consensus       257 ~L~~  260 (261)
                      ++++
T Consensus       157 ~~~~  160 (346)
T 4a2c_A          157 QGCE  160 (346)
T ss_dssp             TCCT
T ss_pred             ccCC
Confidence            7654

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=99.95  E-value=2.8e-27  Score=213.03  Aligned_cols=154  Identities=18%  Similarity=0.162  Sum_probs=129.5

Q ss_pred             ceeeeEEEEecCC-CCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCC
Q psy7798         100 VIECKAAVAWEPK-KPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTS  177 (261)
Q Consensus       100 ~~~~~~~~~~~~g-~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~  177 (261)
                      +.+|+++++.+++ +.+++.+.+.|.|++|||+|||+++|||++|++.+.|.++. ..+|.++|||++|+|+++|++|++
T Consensus        25 ~~~mkA~~~~~~~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG~~v~~  104 (363)
T 3uog_A           25 SKWMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVTR  104 (363)
T ss_dssp             CSEEEEEEBSCTTTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             chhhEEEEEccCCCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEECCCCCC
Confidence            4579999999775 45999999999999999999999999999999999998763 567899999999999999999999


Q ss_pred             CCCCCEEEEeeccCCCCCcccccCccccccc---------cccccceeeeeeeecccccccCCCCChhhhccccchHHHH
Q psy7798         178 VAPGDHVIPLYIPQCNECKFCKSSKTNLCTK---------IRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTT  248 (261)
Q Consensus       178 ~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA  248 (261)
                      |++||||++.+..      .|..+. +.|..         ....|++.++.++....++++|+++++++||+++.+++||
T Consensus       105 ~~vGDrV~~~~~~------~c~~g~-~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta  177 (363)
T 3uog_A          105 FRPGDRVISTFAP------GWLDGL-RPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTA  177 (363)
T ss_dssp             CCTTCEEEECSST------TCCSSS-CCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTTHHHHH
T ss_pred             CCCCCEEEEeccc------cccccc-cccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhcccHHHHH
Confidence            9999999987543      345555 56641         1122556666666668889999999999999999999999


Q ss_pred             HHHHhcccCccc
Q psy7798         249 HFAVIKRRDFEK  260 (261)
Q Consensus       249 ~~aL~~~a~L~~  260 (261)
                      |++|.+.+++++
T Consensus       178 ~~al~~~~~~~~  189 (363)
T 3uog_A          178 WFALVEKGHLRA  189 (363)
T ss_dssp             HHHHTTTTCCCT
T ss_pred             HHHHHHhcCCCC
Confidence            999988888864

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=99.95  E-value=1.9e-27  Score=216.54  Aligned_cols=156  Identities=20%  Similarity=0.254  Sum_probs=134.3

Q ss_pred             eeeEEEEecCCCCcEEEEeeCCCCC-CCe------EEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCC
Q psy7798         102 ECKAAVAWEPKKPLSLETIQVAPPK-AGE------VRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEG  174 (261)
Q Consensus       102 ~~~~~~~~~~g~~l~~~~~~~p~~~-~~e------VlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~  174 (261)
                      +||++++.+++ .+++++++.|.|+ ++|      |+|||+++|||++|++++.|.++ ..+|.++|||++|+|+++|++
T Consensus         2 ~Mka~~~~~~~-~l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~p~v~GhE~~G~V~~vG~~   79 (398)
T 1kol_A            2 GNRGVVYLGSG-KVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGRD   79 (398)
T ss_dssp             CEEEEEEEETT-EEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECTT
T ss_pred             ccEEEEEecCC-ceEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC-CCCCcccCcccEEEEEEECCC
Confidence            58999998876 4899999999997 898      99999999999999999999764 346789999999999999999


Q ss_pred             CCCCCCCCEEEEeeccCCCCCcccccCccccccccc--------------cccceeeeeeeecc---cccccCCCCChhh
Q psy7798         175 VTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIR--------------TTQLFLTSNVTISD---FNMGYSMTGSLER  237 (261)
Q Consensus       175 v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~g~~~~~~~~~~---~~~~~~~~~s~~e  237 (261)
                      |++|++||||++.+..+|+.|.+|..+..+.|....              ...|.+++|+.++.   .++++|+++++++
T Consensus        80 v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~~~~~~  159 (398)
T 1kol_A           80 VENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAME  159 (398)
T ss_dssp             CCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHHHH
T ss_pred             CCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEECCCCcchhh
Confidence            999999999998777789999999999999998642              12355566666663   6889999999998


Q ss_pred             ----hccccchHHHHHHHHhcccCccc
Q psy7798         238 ----GSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       238 ----aA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                          +|+++.+++|||++|. .+++++
T Consensus       160 ~~~~aa~l~~~~~ta~~al~-~~~~~~  185 (398)
T 1kol_A          160 KIRDLTCLSDILPTGYHGAV-TAGVGP  185 (398)
T ss_dssp             THHHHGGGGTHHHHHHHHHH-HTTCCT
T ss_pred             hcccccccccHHHHHHHHHH-HcCCCC
Confidence                7999999999999995 677754

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=99.94  E-value=1.9e-26  Score=206.86  Aligned_cols=141  Identities=16%  Similarity=0.141  Sum_probs=124.1

Q ss_pred             CcceeeeEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCC
Q psy7798          98 PQVIECKAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEG  174 (261)
Q Consensus        98 ~~~~~~~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~  174 (261)
                      +.|.+||++++.++|++  +++.+.+.|.|++|||+|||+++|||++|++.+.|.++. ..+|.++|||++|+|+++|++
T Consensus        24 ~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~  103 (353)
T 4dup_A           24 SLPQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVGPG  103 (353)
T ss_dssp             CCCSSEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEECTT
T ss_pred             CCChheeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEECCC
Confidence            45668999999998865  899999999999999999999999999999999998764 346899999999999999999


Q ss_pred             CCCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhc
Q psy7798         175 VTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIK  254 (261)
Q Consensus       175 v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~  254 (261)
                      |++|++||||+++..                      .|++.++.++....++++|+++++++||+++.+++|||++|.+
T Consensus       104 v~~~~vGdrV~~~~~----------------------~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~  161 (353)
T 4dup_A          104 VSGYAVGDKVCGLAN----------------------GGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQ  161 (353)
T ss_dssp             CCSCCTTCEEEEECS----------------------SCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTT
T ss_pred             CCCCCCCCEEEEecC----------------------CCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHH
Confidence            999999999987542                      1556666666668889999999999999999999999999998


Q ss_pred             ccCccc
Q psy7798         255 RRDFEK  260 (261)
Q Consensus       255 ~a~L~~  260 (261)
                      .+++++
T Consensus       162 ~~~~~~  167 (353)
T 4dup_A          162 MAGLTE  167 (353)
T ss_dssp             TTCCCT
T ss_pred             hcCCCC
Confidence            888865

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=99.94  E-value=8e-27  Score=215.51  Aligned_cols=166  Identities=19%  Similarity=0.146  Sum_probs=133.5

Q ss_pred             ccCCCcceeeeEEEEecCC-------------CCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHc------------
Q psy7798          94 MISLPQVIECKAAVAWEPK-------------KPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLD------------  148 (261)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~g-------------~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~------------  148 (261)
                      +...+.|.+|+++++.+++             +.+++++++.|.|++|||+|||+++|||++|++...            
T Consensus        16 ~~~~~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~   95 (447)
T 4a0s_A           16 IEAAPVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQ   95 (447)
T ss_dssp             HHHSCCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHH
T ss_pred             hhccCCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhh
Confidence            4445677899999999887             358999999999999999999999999999986543            


Q ss_pred             ----CCCCC-CCCC-cccccceEEEEEEeCCCCCCCCCCCEEEEeeccCCCCCcccccCcccccccccc------cccee
Q psy7798         149 ----GLDSE-GKFP-CVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT------TQLFL  216 (261)
Q Consensus       149 ----g~~~~-~~~p-~~lG~E~~G~V~~vG~~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~  216 (261)
                          |.++. ..+| .++|||++|+|+++|++|++|++||||++.+...|+.|..| .+..+.|.....      .|++.
T Consensus        96 ~~~~g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~-~~~~~~c~~~~~~G~~~~~G~~a  174 (447)
T 4a0s_A           96 NARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPAT-HGDGMLGTEQRAWGFETNFGGLA  174 (447)
T ss_dssp             HHTTCGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGG-GTCTTCSTTCEETTTTSSSCSSB
T ss_pred             hcccCccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCccccc-ccccccccccccccccCCCCcee
Confidence                21111 2355 69999999999999999999999999999877777777644 466778865432      25565


Q ss_pred             eeeeeecccccccCCCCChhhhccccchHHHHHHHHhcc--cCccc
Q psy7798         217 TSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKR--RDFEK  260 (261)
Q Consensus       217 ~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~--a~L~~  260 (261)
                      ++.++....++++|+++++++||++|.+++|||++|+..  +++++
T Consensus       175 ey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~  220 (447)
T 4a0s_A          175 EYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQ  220 (447)
T ss_dssp             SEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCT
T ss_pred             eeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCC
Confidence            666666688899999999999999999999999999754  77754

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=99.94  E-value=1.9e-26  Score=203.67  Aligned_cols=140  Identities=17%  Similarity=0.141  Sum_probs=122.4

Q ss_pred             eeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCC
Q psy7798         101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAP  180 (261)
Q Consensus       101 ~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~v  180 (261)
                      .+||++++.+..+.+++.+.+.|+|++|||+|||+++|||++|++.+.|.++...+|.++|||++|+|+++|++|++|++
T Consensus         3 ~tMka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v   82 (315)
T 3goh_A            3 EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSKML   82 (315)
T ss_dssp             CEEEEEEEETTTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTCCCTTCCCCSEEEEEEEEECTTSCGGGT
T ss_pred             cceEEEEEeCCCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCcCCCCCEeeeeeEEEEEEeCCCCCCCCC
Confidence            36999999863445999999999999999999999999999999999998876678999999999999999999999999


Q ss_pred             CCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         181 GDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       181 GDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      ||||++...                   ....|++.++.++....++++|+++++++||+++.+++|||++| +.+++++
T Consensus        83 GdrV~~~~~-------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~  142 (315)
T 3goh_A           83 GRRVAYHTS-------------------LKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAF-EKIPLTK  142 (315)
T ss_dssp             TCEEEEECC-------------------TTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHH-TTSCCCS
T ss_pred             CCEEEEeCC-------------------CCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHH-hhcCCCC
Confidence            999998652                   11126666666666688899999999999999999999999999 8888864

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=99.94  E-value=2.5e-26  Score=204.97  Aligned_cols=138  Identities=22%  Similarity=0.235  Sum_probs=123.5

Q ss_pred             eeeeEEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCC
Q psy7798         101 IECKAAVAWEPKKP---LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVT  176 (261)
Q Consensus       101 ~~~~~~~~~~~g~~---l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~  176 (261)
                      ++||++++.++|++   +++.+.+.|+|++|||+|||+++|||++|++.+.|.++. ..+|.++|||++|+|+++|++|+
T Consensus         3 ~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~   82 (340)
T 3gms_A            3 LHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFVS   82 (340)
T ss_dssp             CEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTTSC
T ss_pred             cccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCCCC
Confidence            57999999999987   899999999999999999999999999999999998764 46789999999999999999999


Q ss_pred             CCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhccc
Q psy7798         177 SVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRR  256 (261)
Q Consensus       177 ~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a  256 (261)
                      +|++||||+++..                      .|++.++.++....++++|+++++++||++++.++|||++|++.+
T Consensus        83 ~~~vGdrV~~~~~----------------------~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~  140 (340)
T 3gms_A           83 RELIGKRVLPLRG----------------------EGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETL  140 (340)
T ss_dssp             GGGTTCEEEECSS----------------------SCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTS
T ss_pred             CCCCCCEEEecCC----------------------CccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhc
Confidence            9999999986421                      155666666666888999999999999999999999999999999


Q ss_pred             Cccc
Q psy7798         257 DFEK  260 (261)
Q Consensus       257 ~L~~  260 (261)
                      ++++
T Consensus       141 ~~~~  144 (340)
T 3gms_A          141 NLQR  144 (340)
T ss_dssp             CCCT
T ss_pred             ccCC
Confidence            8875

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=99.94  E-value=4.6e-26  Score=203.63  Aligned_cols=144  Identities=21%  Similarity=0.206  Sum_probs=123.7

Q ss_pred             ceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC--CCCCcccccceEEEEEEeCCCCCC
Q psy7798         100 VIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE--GKFPCVLGHEGSGIVESVGEGVTS  177 (261)
Q Consensus       100 ~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~--~~~p~~lG~E~~G~V~~vG~~v~~  177 (261)
                      +.+|+++++.++++++++.+.|.|.|++|||+|||+++|||++|++.+.|..+.  ..+|.++|||++|+|+++|++|++
T Consensus         5 ~~~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~v~~   84 (343)
T 3gaz_A            5 TPTMIAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEVDS   84 (343)
T ss_dssp             -CEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             chhheEEEEecCCCceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCCCCC
Confidence            457999999999988999999999999999999999999999999999987532  457899999999999999999999


Q ss_pred             CCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccC
Q psy7798         178 VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRD  257 (261)
Q Consensus       178 ~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~  257 (261)
                      |++||||++...+..                 ...|++.++.++....+.++|+++++++||++|++++|||++|++.++
T Consensus        85 ~~vGdrV~~~~~g~~-----------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~  147 (343)
T 3gaz_A           85 FRVGDAVFGLTGGVG-----------------GLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQ  147 (343)
T ss_dssp             CCTTCEEEEECCSST-----------------TCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTC
T ss_pred             CCCCCEEEEEeCCCC-----------------CCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcC
Confidence            999999987542110                 012566666666668889999999999999999999999999988888


Q ss_pred             ccc
Q psy7798         258 FEK  260 (261)
Q Consensus       258 L~~  260 (261)
                      +++
T Consensus       148 ~~~  150 (343)
T 3gaz_A          148 VQD  150 (343)
T ss_dssp             CCT
T ss_pred             CCC
Confidence            864

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=99.94  E-value=4.6e-26  Score=204.02  Aligned_cols=138  Identities=22%  Similarity=0.270  Sum_probs=122.8

Q ss_pred             eeeeEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCC
Q psy7798         101 IECKAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTS  177 (261)
Q Consensus       101 ~~~~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~  177 (261)
                      |+||++++.+++++  +++.+.+.|.|++|||+|||+++|||++|++...|.++. ..+|.++|||++|+|+++|++|++
T Consensus         2 m~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~   81 (349)
T 4a27_A            2 MEMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKG   81 (349)
T ss_dssp             CCEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCCS
T ss_pred             ceeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCCC
Confidence            67999999998854  899999999999999999999999999999999998753 467899999999999999999999


Q ss_pred             CCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccC
Q psy7798         178 VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRD  257 (261)
Q Consensus       178 ~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~  257 (261)
                      |++||||+++..                      .|++.++.++....++++|+++++++||+++++++|||++|.+.++
T Consensus        82 ~~~GdrV~~~~~----------------------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~  139 (349)
T 4a27_A           82 YEIGDRVMAFVN----------------------YNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVAN  139 (349)
T ss_dssp             CCTTCEEEEECS----------------------SCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSC
T ss_pred             CCCCCEEEEecC----------------------CCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence            999999998642                      1556666666668889999999999999999999999999998888


Q ss_pred             ccc
Q psy7798         258 FEK  260 (261)
Q Consensus       258 L~~  260 (261)
                      +++
T Consensus       140 ~~~  142 (349)
T 4a27_A          140 LRE  142 (349)
T ss_dssp             CCT
T ss_pred             CCC
Confidence            874

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=99.94  E-value=4e-26  Score=203.94  Aligned_cols=140  Identities=19%  Similarity=0.203  Sum_probs=123.4

Q ss_pred             CcceeeeEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCC
Q psy7798          98 PQVIECKAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEG  174 (261)
Q Consensus        98 ~~~~~~~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~  174 (261)
                      ..|.+||++++..++++  +++.+.+.|.|++|||+|||+++|||++|++.+.|.++. ..+|.++|||++|+|+++|++
T Consensus        17 ~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~   96 (342)
T 4eye_A           17 QGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAPEG   96 (342)
T ss_dssp             -CCCEEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEECCTT
T ss_pred             cCCcceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEECCC
Confidence            45678999999988766  999999999999999999999999999999999998753 467899999999999999999


Q ss_pred             CCCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhc
Q psy7798         175 VTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIK  254 (261)
Q Consensus       175 v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~  254 (261)
                      |+ |++||||+++..                      .|++.++.++....++++|+++++++||+++.+++|||++|.+
T Consensus        97 v~-~~vGDrV~~~~~----------------------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~  153 (342)
T 4eye_A           97 SG-IKPGDRVMAFNF----------------------IGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYAR  153 (342)
T ss_dssp             SS-CCTTCEEEEECS----------------------SCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHT
T ss_pred             CC-CCCCCEEEEecC----------------------CCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHH
Confidence            99 999999998641                      1556666666668889999999999999999999999999988


Q ss_pred             ccCccc
Q psy7798         255 RRDFEK  260 (261)
Q Consensus       255 ~a~L~~  260 (261)
                      .+++++
T Consensus       154 ~~~~~~  159 (342)
T 4eye_A          154 RGQLRA  159 (342)
T ss_dssp             TSCCCT
T ss_pred             hcCCCC
Confidence            888864

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=99.94  E-value=4.4e-26  Score=201.89  Aligned_cols=141  Identities=19%  Similarity=0.131  Sum_probs=120.9

Q ss_pred             eeeeEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCC--C---CCCCCCcccccceEEEEEEeCC
Q psy7798         101 IECKAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL--D---SEGKFPCVLGHEGSGIVESVGE  173 (261)
Q Consensus       101 ~~~~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~--~---~~~~~p~~lG~E~~G~V~~vG~  173 (261)
                      ++||++++.+++++  +++.+.+.|+|++|||+|||+++|||++|++.+.|.  +   ....+|.++|||++|+|+++|+
T Consensus         5 ~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG~   84 (321)
T 3tqh_A            5 KEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGS   84 (321)
T ss_dssp             CEEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEECT
T ss_pred             ccceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeCC
Confidence            57999999998876  899999999999999999999999999999999983  1   1245789999999999999999


Q ss_pred             CCCCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHh
Q psy7798         174 GVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVI  253 (261)
Q Consensus       174 ~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~  253 (261)
                      +|++|++||||++.....                  ...|++.++.++....++++|+++++++||++|++++|||++| 
T Consensus        85 ~v~~~~~GdrV~~~~~~~------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-  145 (321)
T 3tqh_A           85 DVNNVNIGDKVMGIAGFP------------------DHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQAL-  145 (321)
T ss_dssp             TCCSCCTTCEEEEECSTT------------------TCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHH-
T ss_pred             CCCCCCCCCEEEEccCCC------------------CCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHH-
Confidence            999999999999875211                  1125566666666688899999999999999999999999999 


Q ss_pred             cccCccc
Q psy7798         254 KRRDFEK  260 (261)
Q Consensus       254 ~~a~L~~  260 (261)
                      +.+++++
T Consensus       146 ~~~~~~~  152 (321)
T 3tqh_A          146 NQAEVKQ  152 (321)
T ss_dssp             HHTTCCT
T ss_pred             HhcCCCC
Confidence            7888764

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=99.94  E-value=1.4e-26  Score=208.67  Aligned_cols=152  Identities=18%  Similarity=0.301  Sum_probs=126.9

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCC-CeEEEEEEEEEcChhhHHHHcC--CCCCCCC---CcccccceEEEEEEeCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKA-GEVRIKIVSTAICHTDAYTLDG--LDSEGKF---PCVLGHEGSGIVESVGEGVT  176 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~-~eVlVkV~a~gln~~Dv~~~~g--~~~~~~~---p~~lG~E~~G~V~~vG~~v~  176 (261)
                      |+++++.++++++++.+.+.|.|++ +||+|||+++|||++|++.+.|  .++...+   |.++|||++|+|++  ++ +
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~--~~-~   77 (366)
T 2cdc_A            1 MKAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEE--SY-H   77 (366)
T ss_dssp             CEEEEECTTSCCCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC-------CCSCEECCSEEEEEECS--CC-S
T ss_pred             CeEEEEeCCCCceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCCCCcCCCCCcCCcceEEEEEe--CC-C
Confidence            6889998888669999999999999 9999999999999999999999  6653445   89999999999999  77 9


Q ss_pred             CCCCCCEEEEeeccCCCCCcccccCccccccccc--------cccceeeeeeeecccccccCCCCChhhhccccchHHHH
Q psy7798         177 SVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIR--------TTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTT  248 (261)
Q Consensus       177 ~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA  248 (261)
                      +|++||||++.+..+|+.|.+|..+..+.|....        ..|++.++.++....++++|++++ ++| +++.+++||
T Consensus        78 ~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~A-al~~~~~ta  155 (366)
T 2cdc_A           78 GFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIG-ILAQPLADI  155 (366)
T ss_dssp             SCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TTG-GGHHHHHHH
T ss_pred             CCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hhh-hhcCcHHHH
Confidence            9999999999888899999999999999998643        224555555555678899999999 775 588999999


Q ss_pred             HHHHh--c--ccCcc
Q psy7798         249 HFAVI--K--RRDFE  259 (261)
Q Consensus       249 ~~aL~--~--~a~L~  259 (261)
                      |++|.  +  .++++
T Consensus       156 ~~al~~~~~~~~~~~  170 (366)
T 2cdc_A          156 EKSIEEILEVQKRVP  170 (366)
T ss_dssp             HHHHHHHHHHGGGSS
T ss_pred             HHHHHhhhhcccCcc
Confidence            99997  4  77776

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=99.93  E-value=9.1e-26  Score=202.69  Aligned_cols=141  Identities=22%  Similarity=0.284  Sum_probs=122.6

Q ss_pred             cceeeeEEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCC
Q psy7798          99 QVIECKAAVAWEPKKP---LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEG  174 (261)
Q Consensus        99 ~~~~~~~~~~~~~g~~---l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~  174 (261)
                      .+.+|+++++.+++.+   +++.+.+.|.|++|||+|||+++|||++|++.+.|.++. ..+|.++|||++|+|+++|++
T Consensus        23 m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~  102 (357)
T 1zsy_A           23 MPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSN  102 (357)
T ss_dssp             CCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEEEECTT
T ss_pred             CchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEEEeCCC
Confidence            4457999999998875   889999999999999999999999999999999997764 246899999999999999999


Q ss_pred             CCCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhc
Q psy7798         175 VTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIK  254 (261)
Q Consensus       175 v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~  254 (261)
                      |++|++||||++...                     ..|++.++.++....+.++|+++++++||+++++++|||++|.+
T Consensus       103 v~~~~vGdrV~~~~~---------------------~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~  161 (357)
T 1zsy_A          103 VTGLKPGDWVIPANA---------------------GLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMD  161 (357)
T ss_dssp             CCSCCTTCEEEESSS---------------------CSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEcCC---------------------CCccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHH
Confidence            999999999987541                     02556666666668889999999999999999999999999988


Q ss_pred             ccCccc
Q psy7798         255 RRDFEK  260 (261)
Q Consensus       255 ~a~L~~  260 (261)
                      .+++++
T Consensus       162 ~~~~~~  167 (357)
T 1zsy_A          162 FEQLQP  167 (357)
T ss_dssp             SSCCCT
T ss_pred             HhccCC
Confidence            888764

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=99.93  E-value=3.4e-26  Score=208.78  Aligned_cols=159  Identities=20%  Similarity=0.290  Sum_probs=129.2

Q ss_pred             eeeeEEEEecCCCCcEEEEeeCCC-CCCCeEEEEEEEEEcChhhHHHHcCCC------C-CCCCCcccccceEEEEEEeC
Q psy7798         101 IECKAAVAWEPKKPLSLETIQVAP-PKAGEVRIKIVSTAICHTDAYTLDGLD------S-EGKFPCVLGHEGSGIVESVG  172 (261)
Q Consensus       101 ~~~~~~~~~~~g~~l~~~~~~~p~-~~~~eVlVkV~a~gln~~Dv~~~~g~~------~-~~~~p~~lG~E~~G~V~~vG  172 (261)
                      .+|++..+...+ .+++.+++.|. |++|||+|||.++|||++|++.+.|..      + ...+|.++|||++|+|+++|
T Consensus        29 ~~m~a~~~~~~~-~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG  107 (404)
T 3ip1_A           29 LTWLGSKVWRYP-EVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAG  107 (404)
T ss_dssp             BBSCGGGTEEEE-EEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEEC
T ss_pred             hhcceEEEEeCC-ceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEEC
Confidence            344444443333 48899999999 999999999999999999999998642      1 13578999999999999999


Q ss_pred             CCC------CCCCCCCEEEEeeccCCCCCcccccCcccccccccc-----ccceeeeeeeecccccccCCCCC------h
Q psy7798         173 EGV------TSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT-----TQLFLTSNVTISDFNMGYSMTGS------L  235 (261)
Q Consensus       173 ~~v------~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~s------~  235 (261)
                      ++|      ++|++||||++.+...|+.|.+|..+..+.|.....     .|++.++.++....+.++|++++      +
T Consensus       108 ~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~~~  187 (404)
T 3ip1_A          108 PEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRL  187 (404)
T ss_dssp             TTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEECGGGBTTBCTHHH
T ss_pred             CCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCCCCCCCCcceEEechHHeEeccccccccccccc
Confidence            999      899999999998888999999999999999986432     24555555555677889998775      4


Q ss_pred             hhhccccchHHHHHHHHhcc-cCccc
Q psy7798         236 ERGSKRDNSFQTTHFAVIKR-RDFEK  260 (261)
Q Consensus       236 ~eaA~lp~~~~TA~~aL~~~-a~L~~  260 (261)
                      .++|+++.+++|||++|... +++++
T Consensus       188 ~~aa~l~~~~~ta~~al~~~~~~~~~  213 (404)
T 3ip1_A          188 FLAGSLVEPTSVAYNAVIVRGGGIRP  213 (404)
T ss_dssp             HHHHHTHHHHHHHHHHHTTTSCCCCT
T ss_pred             hhHHhhhhHHHHHHHHHHHhccCCCC
Confidence            66999999999999999755 36654

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=99.93  E-value=9.8e-26  Score=203.08  Aligned_cols=142  Identities=18%  Similarity=0.119  Sum_probs=121.3

Q ss_pred             cceeeeEEEEecC---C--CCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCC
Q psy7798          99 QVIECKAAVAWEP---K--KPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGE  173 (261)
Q Consensus        99 ~~~~~~~~~~~~~---g--~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~  173 (261)
                      ..++||++++.++   +  +.+++.+.|.|.|++|||+|||+++|||++|++.+.|.++...+|.++|||++|+|+++|+
T Consensus        19 ~m~~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~   98 (363)
T 4dvj_A           19 YFQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAVGP   98 (363)
T ss_dssp             CCCEEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC--CCSBCCCCCEEEEEEEECT
T ss_pred             hhheeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCCCCCCCcccceeEEEEEEeCC
Confidence            3467999999876   3  3389999999999999999999999999999999999887667889999999999999999


Q ss_pred             CCCCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHh
Q psy7798         174 GVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVI  253 (261)
Q Consensus       174 ~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~  253 (261)
                      +|++|++||||++...                   ....|++.++.++....+.++|+++++++||++|++++|||++|+
T Consensus        99 ~v~~~~vGdrV~~~~~-------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~  159 (363)
T 4dvj_A           99 DVTLFRPGDEVFYAGS-------------------IIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFF  159 (363)
T ss_dssp             TCCSCCTTCEEEECCC-------------------TTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEccC-------------------CCCCccceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHH
Confidence            9999999999987431                   111256666666666888999999999999999999999999999


Q ss_pred             cccCcc
Q psy7798         254 KRRDFE  259 (261)
Q Consensus       254 ~~a~L~  259 (261)
                      +.++++
T Consensus       160 ~~~~~~  165 (363)
T 4dvj_A          160 DRLDVN  165 (363)
T ss_dssp             TTSCTT
T ss_pred             HhhCcC
Confidence            988886

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=99.93  E-value=6.2e-26  Score=210.19  Aligned_cols=165  Identities=18%  Similarity=0.162  Sum_probs=133.9

Q ss_pred             cCCCcceeeeEEEEecC---------------CCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCC---------
Q psy7798          95 ISLPQVIECKAAVAWEP---------------KKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL---------  150 (261)
Q Consensus        95 ~~~~~~~~~~~~~~~~~---------------g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~---------  150 (261)
                      ...+.|.+|+++++.++               ++.+++++++.|+|++|||+|||.++|||++|++...+.         
T Consensus        23 ~~~~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~  102 (456)
T 3krt_A           23 AALPLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLE  102 (456)
T ss_dssp             HHSCCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHH
T ss_pred             ccCCCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhh
Confidence            34456778999999976               245899999999999999999999999999999876432         


Q ss_pred             ----CC----CCCCC-cccccceEEEEEEeCCCCCCCCCCCEEEEeeccCCCCCcccccCcccccccccc------ccce
Q psy7798         151 ----DS----EGKFP-CVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT------TQLF  215 (261)
Q Consensus       151 ----~~----~~~~p-~~lG~E~~G~V~~vG~~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~  215 (261)
                          ..    ...+| .++|||++|+|+++|++|++|++||||++.+ ..|..|..|..+..+.|+....      .|++
T Consensus       103 ~~g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-~~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~  181 (456)
T 3krt_A          103 RYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHC-LSVELESSDGHNDTMLDPEQRIWGFETNFGGL  181 (456)
T ss_dssp             HHHTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECC-EECCCCSGGGTTSGGGCTTCEETTTTSSSCSS
T ss_pred             hccccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeC-CcccccccccccccccCccccccccCCCCCcc
Confidence                11    12356 6899999999999999999999999999865 4677888888888888875532      2555


Q ss_pred             eeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcc--cCccc
Q psy7798         216 LTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKR--RDFEK  260 (261)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~--a~L~~  260 (261)
                      +++.++....++++|+++++++||+++.+++|||++|...  +++++
T Consensus       182 aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~  228 (456)
T 3krt_A          182 AEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQ  228 (456)
T ss_dssp             BSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCT
T ss_pred             cceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCC
Confidence            5555666688899999999999999999999999999765  66653

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=99.93  E-value=9e-26  Score=200.82  Aligned_cols=138  Identities=22%  Similarity=0.133  Sum_probs=122.7

Q ss_pred             cceeeeEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCC
Q psy7798          99 QVIECKAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVT  176 (261)
Q Consensus        99 ~~~~~~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~  176 (261)
                      .|.+||++++.+++++  +++++.+.|+|++|||+|||+++|||++|++...|.++ ..+|.++|||++|+|+++|++|+
T Consensus         5 ~p~~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~P~i~G~e~~G~V~~vG~~v~   83 (334)
T 3qwb_A            5 IPEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP-CEKPYVLGREASGTVVAKGKGVT   83 (334)
T ss_dssp             CCSEEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC-CCSSEECCSEEEEEEEEECTTCC
T ss_pred             CchheEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC-CCCCCccccceEEEEEEECCCCC
Confidence            4668999999998865  89999999999999999999999999999999999876 45789999999999999999999


Q ss_pred             CCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeee-cccccccCCCCChhh---hccccchHHHHHHHH
Q psy7798         177 SVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTI-SDFNMGYSMTGSLER---GSKRDNSFQTTHFAV  252 (261)
Q Consensus       177 ~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~s~~e---aA~lp~~~~TA~~aL  252 (261)
                      +|++||||+++..                       |++.++.++. ...++++|+++++++   ||++++.++|||++|
T Consensus        84 ~~~~GdrV~~~~~-----------------------G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l  140 (334)
T 3qwb_A           84 NFEVGDQVAYISN-----------------------STFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFT  140 (334)
T ss_dssp             SCCTTCEEEEECS-----------------------SCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeeC-----------------------CcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHH
Confidence            9999999987531                       5566666666 677889999999999   999999999999999


Q ss_pred             hcccCccc
Q psy7798         253 IKRRDFEK  260 (261)
Q Consensus       253 ~~~a~L~~  260 (261)
                      .+.+++++
T Consensus       141 ~~~~~~~~  148 (334)
T 3qwb_A          141 NEAYHVKK  148 (334)
T ss_dssp             HTTSCCCT
T ss_pred             HHhccCCC
Confidence            88888764

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=99.93  E-value=1.3e-25  Score=201.48  Aligned_cols=140  Identities=19%  Similarity=0.174  Sum_probs=120.0

Q ss_pred             cceeeeEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCC
Q psy7798          99 QVIECKAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGV  175 (261)
Q Consensus        99 ~~~~~~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v  175 (261)
                      .+.+|+++++.+++.+  +++.+.+.|.|+++||+|||.++|||++|++...|.++. ..+|.++|||++|+|+++|++|
T Consensus        19 ~~~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~~v   98 (354)
T 2j8z_A           19 YFQSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGC   98 (354)
T ss_dssp             --CEEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEECSCC
T ss_pred             chhheeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEECCCc
Confidence            4457999999988853  889999999999999999999999999999999997764 2468999999999999999999


Q ss_pred             -CCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhc
Q psy7798         176 -TSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIK  254 (261)
Q Consensus       176 -~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~  254 (261)
                       ++|++||||+++..                      .|++.++.++....++++|+++++++||+++.+++|||++|++
T Consensus        99 ~~~~~vGdrV~~~~~----------------------~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~  156 (354)
T 2j8z_A           99 QGHWKIGDTAMALLP----------------------GGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHL  156 (354)
T ss_dssp             --CCCTTCEEEEECS----------------------SCCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTT
T ss_pred             CCCCCCCCEEEEecC----------------------CCcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHH
Confidence             99999999998531                      1556666666668889999999999999999999999999988


Q ss_pred             ccCccc
Q psy7798         255 RRDFEK  260 (261)
Q Consensus       255 ~a~L~~  260 (261)
                      .+++++
T Consensus       157 ~~~~~~  162 (354)
T 2j8z_A          157 VGNVQA  162 (354)
T ss_dssp             TSCCCT
T ss_pred             hcCCCC
Confidence            888764

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=99.93  E-value=8.8e-26  Score=200.25  Aligned_cols=137  Identities=20%  Similarity=0.196  Sum_probs=122.4

Q ss_pred             eeEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAP  180 (261)
Q Consensus       103 ~~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~v  180 (261)
                      ||++++.++|++  +++.+.+.|+|++|||+|||+++|||++|++...|.++...+|.++|||++|+|+++|++|++|++
T Consensus         2 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~   81 (325)
T 3jyn_A            2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFKV   81 (325)
T ss_dssp             EEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             cEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence            899999998876  899999999999999999999999999999999998876678899999999999999999999999


Q ss_pred             CCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         181 GDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       181 GDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      ||||++...                     ..|++.++.++....++++|+++++++||++++.++|||++|.+.+++++
T Consensus        82 GdrV~~~~~---------------------~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  140 (325)
T 3jyn_A           82 GDRVAYGTG---------------------PLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKP  140 (325)
T ss_dssp             TCEEEESSS---------------------SSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCT
T ss_pred             CCEEEEecC---------------------CCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCC
Confidence            999986431                     12566666666668889999999999999999999999999999888864

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=99.93  E-value=1.6e-25  Score=200.36  Aligned_cols=138  Identities=21%  Similarity=0.106  Sum_probs=119.6

Q ss_pred             eeeeEEEEecCC-----CCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCC
Q psy7798         101 IECKAAVAWEPK-----KPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGV  175 (261)
Q Consensus       101 ~~~~~~~~~~~g-----~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v  175 (261)
                      |+||++++.++|     +.+++.+.+.|.|++|||+|||+++|||++|++...|.  ...+|.++|||++|+|+++|++|
T Consensus         1 m~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~--~~~~p~i~G~e~~G~V~~vG~~v   78 (346)
T 3fbg_A            1 MSLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD--VSKAPRVLGFDAIGVVESVGNEV   78 (346)
T ss_dssp             -CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC--CSSSCBCCCCCEEEEEEEECTTC
T ss_pred             CCcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC--CCCCCcCcCCccEEEEEEeCCCC
Confidence            579999999876     34999999999999999999999999999999999886  24568999999999999999999


Q ss_pred             CCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcc
Q psy7798         176 TSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKR  255 (261)
Q Consensus       176 ~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~  255 (261)
                      ++|++||||++...                   ....|++.++.++....++++|+++++++||++|++++|||++|.+.
T Consensus        79 ~~~~~GdrV~~~~~-------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~  139 (346)
T 3fbg_A           79 TMFNQGDIVYYSGS-------------------PDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDV  139 (346)
T ss_dssp             CSCCTTCEEEECCC-------------------TTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTT
T ss_pred             CcCCCCCEEEEcCC-------------------CCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHh
Confidence            99999999987431                   11125666666666688899999999999999999999999999999


Q ss_pred             cCcc
Q psy7798         256 RDFE  259 (261)
Q Consensus       256 a~L~  259 (261)
                      ++++
T Consensus       140 ~~~~  143 (346)
T 3fbg_A          140 FGIS  143 (346)
T ss_dssp             SCCC
T ss_pred             cCCc
Confidence            8886

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=99.93  E-value=2.7e-25  Score=199.32  Aligned_cols=140  Identities=20%  Similarity=0.262  Sum_probs=120.7

Q ss_pred             ceeeeEEEEecCCCC--cEE-EEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCC
Q psy7798         100 VIECKAAVAWEPKKP--LSL-ETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGV  175 (261)
Q Consensus       100 ~~~~~~~~~~~~g~~--l~~-~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v  175 (261)
                      +.+|+++++.+++++  +++ .+.+.|.|++|||+|||.++|||++|++...|.++. ..+|.++|||++|+|+++|++|
T Consensus        27 ~~~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v  106 (351)
T 1yb5_A           27 QKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNA  106 (351)
T ss_dssp             -CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTC
T ss_pred             cceEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEECCCC
Confidence            346999999887754  888 799999999999999999999999999999997643 4578999999999999999999


Q ss_pred             CCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcc
Q psy7798         176 TSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKR  255 (261)
Q Consensus       176 ~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~  255 (261)
                      ++|++||||++...                     ..|++.++.++....++++|+++++++||+++.+++|||++|.+.
T Consensus       107 ~~~~vGdrV~~~~~---------------------~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~  165 (351)
T 1yb5_A          107 SAFKKGDRVFTSST---------------------ISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHS  165 (351)
T ss_dssp             TTCCTTCEEEESCC---------------------SSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTT
T ss_pred             CCCCCCCEEEEeCC---------------------CCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHh
Confidence            99999999987531                     125666666666688899999999999999999999999999888


Q ss_pred             cCccc
Q psy7798         256 RDFEK  260 (261)
Q Consensus       256 a~L~~  260 (261)
                      +++++
T Consensus       166 ~~~~~  170 (351)
T 1yb5_A          166 ACVKA  170 (351)
T ss_dssp             SCCCT
T ss_pred             hCCCC
Confidence            88764

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=99.93  E-value=2.6e-25  Score=197.19  Aligned_cols=137  Identities=22%  Similarity=0.266  Sum_probs=118.3

Q ss_pred             eeEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAP  180 (261)
Q Consensus       103 ~~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~v  180 (261)
                      ||++++.+++.+  +++.+.+.|.|++|||+|||+++|||++|++...|.++...+|.++|||++|+|+++|++|++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~   81 (327)
T 1qor_A            2 ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKA   81 (327)
T ss_dssp             CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCT
T ss_pred             cEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence            789998887754  889999999999999999999999999999999998765557899999999999999999999999


Q ss_pred             CCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         181 GDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       181 GDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      |||| +..    +                ...|++.++.++....++++|+++++++||+++.+++|||++|.+.+++++
T Consensus        82 GdrV-~~~----g----------------~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~  140 (327)
T 1qor_A           82 GDRV-VYA----Q----------------SALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKP  140 (327)
T ss_dssp             TCEE-EES----C----------------CSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCT
T ss_pred             CCEE-EEC----C----------------CCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCC
Confidence            9999 432    0                012566666666668889999999999999999999999999987888764

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=99.93  E-value=5.6e-25  Score=197.82  Aligned_cols=139  Identities=19%  Similarity=0.222  Sum_probs=119.6

Q ss_pred             eeeeEEEEecCCCC---cEEEEeeCCCCC--CCeEEEEEEEEEcChhhHHHHcCCCCC-CCCC---------cccccceE
Q psy7798         101 IECKAAVAWEPKKP---LSLETIQVAPPK--AGEVRIKIVSTAICHTDAYTLDGLDSE-GKFP---------CVLGHEGS  165 (261)
Q Consensus       101 ~~~~~~~~~~~g~~---l~~~~~~~p~~~--~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p---------~~lG~E~~  165 (261)
                      ++||++++.+++++   +++.+.+.|.|+  +|||+|||+++|||++|++.+.|.++. ..+|         .++|||++
T Consensus         2 ~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~~   81 (364)
T 1gu7_A            2 ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGL   81 (364)
T ss_dssp             EEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCE
T ss_pred             ceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCceeE
Confidence            57999999999875   899999988877  999999999999999999999997653 3456         89999999


Q ss_pred             EEEEEeCCCCCCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCC-----------CCC
Q psy7798         166 GIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSM-----------TGS  234 (261)
Q Consensus       166 G~V~~vG~~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-----------~~s  234 (261)
                      |+|+++|++|++|++||||++...                     ..|++.++.++....++++|+           +++
T Consensus        82 G~V~~vG~~v~~~~vGdrV~~~~~---------------------~~G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~  140 (364)
T 1gu7_A           82 FEVIKVGSNVSSLEAGDWVIPSHV---------------------NFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLT  140 (364)
T ss_dssp             EEEEEECTTCCSCCTTCEEEESSS---------------------CCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCC
T ss_pred             EEEEEeCCCCCcCCCCCEEEecCC---------------------CCCcchheEecCHHHeEEcCCccccccccccCCCC
Confidence            999999999999999999987531                     125666666666688889998           899


Q ss_pred             hhhhccccchHHHHHHHHhcccCccc
Q psy7798         235 LERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       235 ~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      +++||+++++++|||++|.+.+++++
T Consensus       141 ~~~aa~l~~~~~ta~~~l~~~~~~~~  166 (364)
T 1gu7_A          141 INQGATISVNPLTAYLMLTHYVKLTP  166 (364)
T ss_dssp             HHHHHTCTTHHHHHHHHHHSSSCCCT
T ss_pred             HHHHhhccccHHHHHHHHHHhhccCC
Confidence            99999999999999999988777764

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=99.93  E-value=3.1e-25  Score=197.33  Aligned_cols=137  Identities=21%  Similarity=0.299  Sum_probs=115.0

Q ss_pred             eeEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCC--CC-CCCCcccccceEEEEEEeCCCCCC
Q psy7798         103 CKAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLD--SE-GKFPCVLGHEGSGIVESVGEGVTS  177 (261)
Q Consensus       103 ~~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~--~~-~~~p~~lG~E~~G~V~~vG~~v~~  177 (261)
                      ||++++.+++.+  +++.+.+.|.|++|||+|||+++|||++|++...|.+  +. ..+|.++|||++|+|+++|++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD   81 (333)
T ss_dssp             CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCS
T ss_pred             cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCC
Confidence            789999888754  8899999999999999999999999999999999976  22 357899999999999999999999


Q ss_pred             CCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhh--hccccchHHHHHHHHhcc
Q psy7798         178 VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLER--GSKRDNSFQTTHFAVIKR  255 (261)
Q Consensus       178 ~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~e--aA~lp~~~~TA~~aL~~~  255 (261)
                      |++||||++...                     ..|++.++.++....++++|+++++++  ||+++.+++|||++|.+.
T Consensus        82 ~~~GdrV~~~~~---------------------~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~  140 (333)
T 1wly_A           82 FTVGERVCTCLP---------------------PLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQT  140 (333)
T ss_dssp             CCTTCEEEECSS---------------------SCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEecC---------------------CCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHh
Confidence            999999976431                     026666666666688899999999999  999999999999999888


Q ss_pred             cCccc
Q psy7798         256 RDFEK  260 (261)
Q Consensus       256 a~L~~  260 (261)
                      +++++
T Consensus       141 ~~~~~  145 (333)
T 1wly_A          141 HKVKP  145 (333)
T ss_dssp             SCCCT
T ss_pred             hCCCC
Confidence            88764

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=99.92  E-value=1e-24  Score=196.93  Aligned_cols=142  Identities=16%  Similarity=0.079  Sum_probs=114.8

Q ss_pred             CcceeeeEEEEecCCCCcEEE-EeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCC
Q psy7798          98 PQVIECKAAVAWEPKKPLSLE-TIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVT  176 (261)
Q Consensus        98 ~~~~~~~~~~~~~~g~~l~~~-~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~  176 (261)
                      +.|.+|+++++.+++. +++. +.+.|.|++|||+|||+++|||++|++.+.|.   ..+|.++|||++|+|+++|++|+
T Consensus         7 ~~p~~mkA~v~~~~~~-l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~---~~~p~v~G~e~~G~V~~vG~~v~   82 (371)
T 3gqv_A            7 IPPPQQTALTVNDHDE-VTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF---ATPWAFLGTDYAGTVVAVGSDVT   82 (371)
T ss_dssp             CCCSCEEEEEECTTSC-EEEEEEECCCCCCTTSEEEEEEEEECCGGGGC--------CCTTSCCCSEEEEEEEEECTTCC
T ss_pred             CCchhceeEEEcCCCc-eEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC---CCCCccCccccEEEEEEeCCCCC
Confidence            3566899999998865 9998 99999999999999999999999999988763   23578999999999999999999


Q ss_pred             CCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcc-
Q psy7798         177 SVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKR-  255 (261)
Q Consensus       177 ~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~-  255 (261)
                      +|++||||++...       .|..+       ....|++.++.++....++++|+++++++||++|++++|||++|++. 
T Consensus        83 ~~~~GdrV~~~~~-------~~~~~-------~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~  148 (371)
T 3gqv_A           83 HIQVGDRVYGAQN-------EMCPR-------TPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLG  148 (371)
T ss_dssp             SCCTTCEEEEECC-------TTCTT-------CTTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEecc-------CCCCC-------CCCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhc
Confidence            9999999987542       22222       12235666666666688899999999999999999999999999877 


Q ss_pred             cC
Q psy7798         256 RD  257 (261)
Q Consensus       256 a~  257 (261)
                      .+
T Consensus       149 ~~  150 (371)
T 3gqv_A          149 LP  150 (371)
T ss_dssp             CC
T ss_pred             cC
Confidence            55

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=99.92  E-value=3.3e-24  Score=193.72  Aligned_cols=140  Identities=19%  Similarity=0.151  Sum_probs=118.3

Q ss_pred             cceeeeEEEEecCCCC--cEE-EEeeCCCC-CCCeEEEEEEEEEcChhhHHHHcCCCC-------------C--CCCCcc
Q psy7798          99 QVIECKAAVAWEPKKP--LSL-ETIQVAPP-KAGEVRIKIVSTAICHTDAYTLDGLDS-------------E--GKFPCV  159 (261)
Q Consensus        99 ~~~~~~~~~~~~~g~~--l~~-~~~~~p~~-~~~eVlVkV~a~gln~~Dv~~~~g~~~-------------~--~~~p~~  159 (261)
                      .++.|+++++.++|++  +++ .+.+.|.| ++|||+|||+++|||++|++.+.|..+             .  ..+|.+
T Consensus        18 ~~~~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~v   97 (375)
T 2vn8_A           18 LYFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLT   97 (375)
T ss_dssp             CCCCEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSBC
T ss_pred             cCccceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCcc
Confidence            3457999999988754  888 89998885 999999999999999999999988532             1  237899


Q ss_pred             cccceEEEEEEeCCCCCCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhc
Q psy7798         160 LGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGS  239 (261)
Q Consensus       160 lG~E~~G~V~~vG~~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA  239 (261)
                      +|||++|+|+++|++|++|++||||++....                   ...|+++++.++....++++|+++++++||
T Consensus        98 ~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~-------------------~~~G~~aey~~v~~~~~~~iP~~ls~~~Aa  158 (375)
T 2vn8_A           98 LGRDVSGVVMECGLDVKYFKPGDEVWAAVPP-------------------WKQGTLSEFVVVSGNEVSHKPKSLTHTQAA  158 (375)
T ss_dssp             CCCEEEEEEEEECTTCCSCCTTCEEEEECCT-------------------TSCCSSBSEEEEEGGGEEECCTTSCHHHHT
T ss_pred             cceeeeEEEEEeCCCCCCCCCCCEEEEecCC-------------------CCCccceeEEEEcHHHeeeCCCCCCHHHHh
Confidence            9999999999999999999999999986420                   112566666666668889999999999999


Q ss_pred             cccchHHHHHHHHhcccC
Q psy7798         240 KRDNSFQTTHFAVIKRRD  257 (261)
Q Consensus       240 ~lp~~~~TA~~aL~~~a~  257 (261)
                      +++.+++|||++|.+.++
T Consensus       159 ~l~~~~~tA~~al~~~~~  176 (375)
T 2vn8_A          159 SLPYVALTAWSAINKVGG  176 (375)
T ss_dssp             TSHHHHHHHHHHHTTTTC
T ss_pred             hhHHHHHHHHHHHHHhcc
Confidence            999999999999988887

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=99.92  E-value=6e-25  Score=196.68  Aligned_cols=144  Identities=18%  Similarity=0.072  Sum_probs=115.3

Q ss_pred             ccCCCcceeeeEEEEe--cC---CCCcEEEEe---------eCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCc
Q psy7798          94 MISLPQVIECKAAVAW--EP---KKPLSLETI---------QVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPC  158 (261)
Q Consensus        94 ~~~~~~~~~~~~~~~~--~~---g~~l~~~~~---------~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~  158 (261)
                      |++...|.+||++++.  ++   .+.+++.+.         +.|.|++|||+|||+++|||++|++.+.|.++. ..+|.
T Consensus         2 Ms~m~~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~   81 (349)
T 3pi7_A            2 MSPMTIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGR   81 (349)
T ss_dssp             ---CCCCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTTS
T ss_pred             CCCCCCchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCCC
Confidence            3444567789999998  33   244777777         999999999999999999999999999998753 45789


Q ss_pred             ccccceEEEEEEeCCCC-CCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhh
Q psy7798         159 VLGHEGSGIVESVGEGV-TSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLER  237 (261)
Q Consensus       159 ~lG~E~~G~V~~vG~~v-~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~e  237 (261)
                      ++|||++|+|+++|++| ++|++||||++...                   ....|++.++.++....+.++|+++++++
T Consensus        82 v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~g-------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~  142 (349)
T 3pi7_A           82 PAGFEGVGTIVAGGDEPYAKSLVGKRVAFATG-------------------LSNWGSWAEYAVAEAAACIPLLDTVRDED  142 (349)
T ss_dssp             BCCSEEEEEEEEECSSHHHHHHTTCEEEEECT-------------------TSSCCSSBSEEEEEGGGEEECCTTCCC--
T ss_pred             CccceEEEEEEEECCCccCCCCCCCEEEEecc-------------------CCCCccceeeEeechHHeEECCCCCCHHH
Confidence            99999999999999999 99999999998641                   11125666666666688899999999999


Q ss_pred             hccccchHHHHHHHHhcccC
Q psy7798         238 GSKRDNSFQTTHFAVIKRRD  257 (261)
Q Consensus       238 aA~lp~~~~TA~~aL~~~a~  257 (261)
                      ||++++.++|||.++ +.++
T Consensus       143 aa~l~~~~~ta~~~~-~~~~  161 (349)
T 3pi7_A          143 GAAMIVNPLTAIAMF-DIVK  161 (349)
T ss_dssp             GGGSSHHHHHHHHHH-HHHH
T ss_pred             HhhccccHHHHHHHH-HHHh
Confidence            999999999999554 5544

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=99.91  E-value=3.7e-24  Score=189.46  Aligned_cols=135  Identities=14%  Similarity=0.109  Sum_probs=114.8

Q ss_pred             eeEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         103 CKAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       103 ~~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      ||++++.+++++  +++++.+.|+|++|||+|||+++|||++|++.+.|.++. ..+|.++|||++|+|+++|  +++|+
T Consensus         1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~~   78 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRFH   78 (324)
T ss_dssp             CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTCC
T ss_pred             CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCCC
Confidence            789999999876  888999999999999999999999999999999998764 4678999999999999998  68999


Q ss_pred             CCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcc
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKR  255 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~  255 (261)
                      +||||++..   |      ..       .....|++.++.++....+.++|+++++++||+++.+++|||++|...
T Consensus        79 vGdrV~~~~---~------~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~  138 (324)
T 3nx4_A           79 AGQEVLLTG---W------GV-------GENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMAL  138 (324)
T ss_dssp             TTCEEEEEC---T------TB-------TTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEcc---c------cc-------CCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHh
Confidence            999999864   1      00       111225666666666688899999999999999999999999999744

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=99.91  E-value=1.7e-23  Score=188.39  Aligned_cols=136  Identities=15%  Similarity=0.095  Sum_probs=116.6

Q ss_pred             ceeeeEEEEecCCC----CcEE-EEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCC
Q psy7798         100 VIECKAAVAWEPKK----PLSL-ETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGE  173 (261)
Q Consensus       100 ~~~~~~~~~~~~g~----~l~~-~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~  173 (261)
                      +.+||++++.++++    .+++ ++.|.|.|++|||+|||+++|||++|++.+.|.++. ..+|.++|||++|+|+++|+
T Consensus        21 ~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~vG~  100 (362)
T 2c0c_A           21 QSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGL  100 (362)
T ss_dssp             CCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEEECT
T ss_pred             hhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEEECC
Confidence            45799999998875    3888 999999999999999999999999999999997753 45789999999999999999


Q ss_pred             CCC-CCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHH
Q psy7798         174 GVT-SVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAV  252 (261)
Q Consensus       174 ~v~-~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL  252 (261)
                      +|+ +|++||||++..                       .|++.++.++....++++|+. + .++|+++.+++|||++|
T Consensus       101 ~V~~~~~vGdrV~~~~-----------------------~G~~aey~~v~~~~~~~~P~~-~-~~aaal~~~~~ta~~al  155 (362)
T 2c0c_A          101 SASARYTVGQAVAYMA-----------------------PGSFAEYTVVPASIATPVPSV-K-PEYLTLLVSGTTAYISL  155 (362)
T ss_dssp             TGGGTCCTTCEEEEEC-----------------------SCCSBSEEEEEGGGCEECSSS-C-HHHHTTTTHHHHHHHHH
T ss_pred             CccCCCCCCCEEEEcc-----------------------CCcceeEEEEcHHHeEECCCC-c-hHhhcccchHHHHHHHH
Confidence            999 999999998753                       155666666666788899985 4 57889999999999999


Q ss_pred             hcccCccc
Q psy7798         253 IKRRDFEK  260 (261)
Q Consensus       253 ~~~a~L~~  260 (261)
                      .+.+++++
T Consensus       156 ~~~~~~~~  163 (362)
T 2c0c_A          156 KELGGLSE  163 (362)
T ss_dssp             HHHTCCCT
T ss_pred             HHhcCCCC
Confidence            88888764

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=99.89  E-value=3.6e-23  Score=187.30  Aligned_cols=131  Identities=18%  Similarity=0.183  Sum_probs=111.3

Q ss_pred             ceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCC---------------------------
Q psy7798         100 VIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDS---------------------------  152 (261)
Q Consensus       100 ~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~---------------------------  152 (261)
                      ...|++++.......+++.+.+.|+|++|||+|||+++|||++|++.+.|.++                           
T Consensus         5 ~~~mka~v~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~   84 (379)
T 3iup_A            5 ALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSM   84 (379)
T ss_dssp             EEEEEEEECTTSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHH
T ss_pred             hhhHHHHHhcCCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCcccccccc
Confidence            45788887754445599999999999999999999999999999999988631                           


Q ss_pred             --CCCCCcccccceEEEEEEeCCCC-CCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeeccccccc
Q psy7798         153 --EGKFPCVLGHEGSGIVESVGEGV-TSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGY  229 (261)
Q Consensus       153 --~~~~p~~lG~E~~G~V~~vG~~v-~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  229 (261)
                        ...+|.++|||++|+|+++|++| ++|++||||++...                       |++.++.++....++++
T Consensus        85 ~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~~-----------------------G~~aey~~v~~~~~~~i  141 (379)
T 3iup_A           85 AGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIGG-----------------------AMYSQYRCIPADQCLVL  141 (379)
T ss_dssp             GGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECCS-----------------------CCSBSEEEEEGGGEEEC
T ss_pred             ccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecCC-----------------------CcceeEEEeCHHHeEEC
Confidence              12467899999999999999999 89999999988541                       55666666666888999


Q ss_pred             CCCCChhhhccccchHHHHHHHHh
Q psy7798         230 SMTGSLERGSKRDNSFQTTHFAVI  253 (261)
Q Consensus       230 ~~~~s~~eaA~lp~~~~TA~~aL~  253 (261)
                      |+++++++||++++.++|||+++.
T Consensus       142 P~~~~~~~aa~l~~~~~ta~~~~~  165 (379)
T 3iup_A          142 PEGATPADGASSFVNPLTALGMVE  165 (379)
T ss_dssp             CTTCCHHHHTTSSHHHHHHHHHHH
T ss_pred             CCCCCHHHHHhhhhhHHHHHHHHH
Confidence            999999999999999999997764

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=99.89  E-value=9.5e-23  Score=180.92  Aligned_cols=141  Identities=18%  Similarity=0.150  Sum_probs=114.9

Q ss_pred             eeeeEEEEecCCC--CcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCC
Q psy7798         101 IECKAAVAWEPKK--PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTS  177 (261)
Q Consensus       101 ~~~~~~~~~~~g~--~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~  177 (261)
                      .+|+++++.++++  .+++++.+.|.|++|||+|||+++|||++|++...|.++. ..+|.++|||++|+|+++  ++++
T Consensus         3 ~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~--~v~~   80 (330)
T 1tt7_A            3 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSS--NDPR   80 (330)
T ss_dssp             CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEEC--SSTT
T ss_pred             CcceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEc--CCCC
Confidence            4699999998773  5899999999999999999999999999999999987643 356899999999999996  4689


Q ss_pred             CCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhc--c
Q psy7798         178 VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIK--R  255 (261)
Q Consensus       178 ~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~--~  255 (261)
                      |++||||++....         .+       ....|++.++.++....++++|+++++++||+++.+++|||++|+.  .
T Consensus        81 ~~vGdrV~~~~~~---------~g-------~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~  144 (330)
T 1tt7_A           81 FAEGDEVIATSYE---------LG-------VSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQ  144 (330)
T ss_dssp             CCTTCEEEEESTT---------BT-------TTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEcccc---------cC-------CCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHh
Confidence            9999999886310         00       0112556666666668889999999999999999999999999863  3


Q ss_pred             cCcc
Q psy7798         256 RDFE  259 (261)
Q Consensus       256 a~L~  259 (261)
                      ++++
T Consensus       145 ~~~~  148 (330)
T 1tt7_A          145 NGLS  148 (330)
T ss_dssp             TTCC
T ss_pred             cCcC
Confidence            5554

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=99.88  E-value=1.4e-22  Score=179.58  Aligned_cols=140  Identities=14%  Similarity=0.126  Sum_probs=114.1

Q ss_pred             eeeEEEEecCCC--CcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCC
Q psy7798         102 ECKAAVAWEPKK--PLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSV  178 (261)
Q Consensus       102 ~~~~~~~~~~g~--~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~  178 (261)
                      +||++++.+++.  .+++++.+.|.|++|||+|||+++|||++|++...|.++. ..+|.++|||++|+|+++  ++++|
T Consensus         3 ~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~~~   80 (328)
T 1xa0_A            3 AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHPRF   80 (328)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSSSC
T ss_pred             cceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCCCC
Confidence            699999998874  4788999999999999999999999999999999886543 356899999999999995  57899


Q ss_pred             CCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhc--cc
Q psy7798         179 APGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIK--RR  256 (261)
Q Consensus       179 ~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~--~a  256 (261)
                      ++||||++....         .+       ....|++.++.++....++++|+++++++||+++.+++|||++|+.  .+
T Consensus        81 ~vGdrV~~~~~~---------~g-------~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~  144 (328)
T 1xa0_A           81 REGDEVIATGYE---------IG-------VTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEH  144 (328)
T ss_dssp             CTTCEEEEESTT---------BT-------TTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEcccc---------CC-------CCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhc
Confidence            999999975310         00       0112566666666668889999999999999999999999999863  35


Q ss_pred             Ccc
Q psy7798         257 DFE  259 (261)
Q Consensus       257 ~L~  259 (261)
                      +++
T Consensus       145 ~~~  147 (328)
T 1xa0_A          145 GLT  147 (328)
T ss_dssp             TCC
T ss_pred             CCC
Confidence            554

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=99.88  E-value=3.8e-22  Score=178.92  Aligned_cols=135  Identities=13%  Similarity=0.115  Sum_probs=111.9

Q ss_pred             cceeeeEEEE-ecC---CC----CcEEEEeeCCCC-CCCeEEEEEEEEEcChhhHHHHcC----CCC-CCCCCcccccce
Q psy7798          99 QVIECKAAVA-WEP---KK----PLSLETIQVAPP-KAGEVRIKIVSTAICHTDAYTLDG----LDS-EGKFPCVLGHEG  164 (261)
Q Consensus        99 ~~~~~~~~~~-~~~---g~----~l~~~~~~~p~~-~~~eVlVkV~a~gln~~Dv~~~~g----~~~-~~~~p~~lG~E~  164 (261)
                      .+++|+++++ ..+   |.    .+++.+.+.|.| ++|||+|||+++|||+.|++...|    .++ ...+|.++|||+
T Consensus         5 ~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~E~   84 (357)
T 2zb4_A            5 AAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGG   84 (357)
T ss_dssp             -CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEEEE
T ss_pred             ccccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccccccE
Confidence            4578999999 555   43    389999999999 999999999999999999988775    332 234678999999


Q ss_pred             EEEEEEeCCCCCCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCC-----Chhhhc
Q psy7798         165 SGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTG-----SLERGS  239 (261)
Q Consensus       165 ~G~V~~vG~~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-----s~~eaA  239 (261)
                      +|+|++  ++|++|++||||++..                        |++.++.++....++++|+++     +++ +|
T Consensus        85 ~G~V~~--~~v~~~~vGdrV~~~~------------------------G~~aey~~v~~~~~~~iP~~~~~~~~~~~-~a  137 (357)
T 2zb4_A           85 IGIIEE--SKHTNLTKGDFVTSFY------------------------WPWQTKVILDGNSLEKVDPQLVDGHLSYF-LG  137 (357)
T ss_dssp             EEEEEE--ECSTTCCTTCEEEEEE------------------------EESBSEEEEEGGGCEECCGGGGTTCGGGG-GT
T ss_pred             EEEEEe--cCCCCCCCCCEEEecC------------------------CCcEEEEEEchHHceecCcccccCchhHH-HH
Confidence            999999  8999999999999853                        456666666667889999988     666 78


Q ss_pred             cccchHHHHHHHHhcccCccc
Q psy7798         240 KRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       240 ~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      +++.+++|||++|++.+++++
T Consensus       138 ~l~~~~~ta~~al~~~~~~~~  158 (357)
T 2zb4_A          138 AIGMPGLTSLIGIQEKGHITA  158 (357)
T ss_dssp             TTSHHHHHHHHHHHHHSCCCT
T ss_pred             hcccHHHHHHHHHHHhcCCCC
Confidence            899999999999988888764

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=99.86  E-value=4.8e-21  Score=170.29  Aligned_cols=132  Identities=13%  Similarity=-0.007  Sum_probs=109.3

Q ss_pred             eeeeEEEEecC------CCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccc----eEEEEEE
Q psy7798         101 IECKAAVAWEP------KKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHE----GSGIVES  170 (261)
Q Consensus       101 ~~~~~~~~~~~------g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E----~~G~V~~  170 (261)
                      ++|+++++...      .+.+++.+.|.|.|++|||+|||+++|||+.|++...+... ..+|.++|||    ++|+|++
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~-~~~p~~~G~e~g~~~~G~V~~   84 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARS-YIPPVGIGEVMRALGVGKVLV   84 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCC-SSCCCCTTSBCCCEEEEEEEE
T ss_pred             ccccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccc-cCCCCCCCcccCCceEEEEEe
Confidence            56999999751      24499999999999999999999999999999988876432 2345667777    8999999


Q ss_pred             eCCCCCCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhh--ccccchHHHH
Q psy7798         171 VGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERG--SKRDNSFQTT  248 (261)
Q Consensus       171 vG~~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~ea--A~lp~~~~TA  248 (261)
                      .  +|++|++||||++.                         |++.++.++....++++|+++++.++  |+++.+++||
T Consensus        85 ~--~v~~~~vGdrV~~~-------------------------G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA  137 (336)
T 4b7c_A           85 S--KHPGFQAGDYVNGA-------------------------LGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTA  137 (336)
T ss_dssp             E--CSTTCCTTCEEEEE-------------------------CCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHH
T ss_pred             c--CCCCCCCCCEEecc-------------------------CCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHH
Confidence            4  58999999999873                         45666666666888999999988877  8899999999


Q ss_pred             HHHHhcccCccc
Q psy7798         249 HFAVIKRRDFEK  260 (261)
Q Consensus       249 ~~aL~~~a~L~~  260 (261)
                      |++|++.+++++
T Consensus       138 ~~al~~~~~~~~  149 (336)
T 4b7c_A          138 YFALLDVGQPKN  149 (336)
T ss_dssp             HHHHHHTTCCCT
T ss_pred             HHHHHHhcCCCC
Confidence            999998888875

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=99.85  E-value=7.1e-21  Score=166.88  Aligned_cols=124  Identities=20%  Similarity=0.135  Sum_probs=106.1

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      |+++++.+++++..+++.+.|.|++|||+|||+++|||++|++...|.++. ..+|.++|||++|+|+           |
T Consensus         1 Mka~~~~~~g~~~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~-----------G   69 (302)
T 1iz0_A            1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE-----------G   69 (302)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET-----------T
T ss_pred             CeEEEEcCCCCchheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE-----------C
Confidence            688999888876667788999999999999999999999999999997764 3578999999999997           9


Q ss_pred             CEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCccc
Q psy7798         182 DHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       182 DrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~~  260 (261)
                      |||++...                      .|++.++.++....+.++|+++++++||+++.+++|||++|.+.+ +++
T Consensus        70 drV~~~~~----------------------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~  125 (302)
T 1iz0_A           70 RRYAALVP----------------------QGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-ARP  125 (302)
T ss_dssp             EEEEEECS----------------------SCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-CCT
T ss_pred             cEEEEecC----------------------CcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-CCC
Confidence            99988641                      155666666666888999999999999999999999999998766 653

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=99.82  E-value=2.2e-19  Score=159.38  Aligned_cols=130  Identities=13%  Similarity=0.038  Sum_probs=103.2

Q ss_pred             ceeeeEEEEecC--C----CCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCC
Q psy7798         100 VIECKAAVAWEP--K----KPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGE  173 (261)
Q Consensus       100 ~~~~~~~~~~~~--g----~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~  173 (261)
                      +++|+++++.+.  |    +.+++.+.+.|.|++|||+|||+++|||+.|... .+   ...+|.++|||++|+|++.  
T Consensus         5 ~~~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~~---~~~~p~~~g~e~~G~Vv~~--   78 (333)
T 1v3u_A            5 MVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-SK---RLKEGAVMMGQQVARVVES--   78 (333)
T ss_dssp             CCEEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-TT---TCCTTSBCCCCEEEEEEEE--
T ss_pred             cccccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-cC---cCCCCcccccceEEEEEec--
Confidence            467999999874  3    3388999999999999999999999999998732 21   1345678999999999995  


Q ss_pred             CCCCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCC----CChhh-hccccchHHHH
Q psy7798         174 GVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMT----GSLER-GSKRDNSFQTT  248 (261)
Q Consensus       174 ~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----~s~~e-aA~lp~~~~TA  248 (261)
                      +|++|++||||++.                         |++.++.++....++++|++    +++++ +|+++.+++||
T Consensus        79 ~v~~~~vGdrV~~~-------------------------g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta  133 (333)
T 1v3u_A           79 KNSAFPAGSIVLAQ-------------------------SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTA  133 (333)
T ss_dssp             SCTTSCTTCEEEEC-------------------------CCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHH
T ss_pred             CCCCCCCCCEEEec-------------------------CceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHH
Confidence            67899999999873                         34555555555778899986    88998 58999999999


Q ss_pred             HHHHhcccCccc
Q psy7798         249 HFAVIKRRDFEK  260 (261)
Q Consensus       249 ~~aL~~~a~L~~  260 (261)
                      |++|.+.+++++
T Consensus       134 ~~al~~~~~~~~  145 (333)
T 1v3u_A          134 YFGLLEVCGVKG  145 (333)
T ss_dssp             HHHHHTTSCCCS
T ss_pred             HHHHHHhhCCCC
Confidence            999988888764

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=99.78  E-value=1.5e-18  Score=154.68  Aligned_cols=133  Identities=11%  Similarity=-0.036  Sum_probs=99.3

Q ss_pred             eeeeEEEEecC-----CC-CcEEE--EeeCCC-CCCCeEEEEEEEEEcChhhHHHHcCCCCC----CCCCcccccceEEE
Q psy7798         101 IECKAAVAWEP-----KK-PLSLE--TIQVAP-PKAGEVRIKIVSTAICHTDAYTLDGLDSE----GKFPCVLGHEGSGI  167 (261)
Q Consensus       101 ~~~~~~~~~~~-----g~-~l~~~--~~~~p~-~~~~eVlVkV~a~gln~~Dv~~~~g~~~~----~~~p~~lG~E~~G~  167 (261)
                      .+|+++++...     +. .+++.  +.+.|. |++|||+|||.++|+|+.|. ...|.+..    ..+|.++|||++|+
T Consensus         3 ~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G~   81 (345)
T 2j3h_A            3 ATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQGY   81 (345)
T ss_dssp             EEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEEE
T ss_pred             ccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeecc
Confidence            46777776543     32 48887  788886 89999999999999999885 45554422    13578999999999


Q ss_pred             EEE--eCCCCCCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeeccc--ccccCC---CCChhhhcc
Q psy7798         168 VES--VGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDF--NMGYSM---TGSLERGSK  240 (261)
Q Consensus       168 V~~--vG~~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~---~~s~~eaA~  240 (261)
                      |.+  ||++|++|++||||++.                         |++..+.++....  +.++|+   +++++ +|+
T Consensus        82 ~~~GvV~~~v~~~~vGdrV~~~-------------------------g~~aey~~v~~~~~~~~~ip~~~~~~~~~-aa~  135 (345)
T 2j3h_A           82 GVSRIIESGHPDYKKGDLLWGI-------------------------VAWEEYSVITPMTHAHFKIQHTDVPLSYY-TGL  135 (345)
T ss_dssp             EEEEEEEECSTTCCTTCEEEEE-------------------------EESBSEEEECCCTTTCEEECCCSSCTTGG-GTT
T ss_pred             eEEEEEecCCCCCCCCCEEEee-------------------------cCceeEEEecccccceeecCCCCCCHHHH-HHh
Confidence            999  99999999999999874                         2333333333344  667775   46666 788


Q ss_pred             ccchHHHHHHHHhcccCccc
Q psy7798         241 RDNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       241 lp~~~~TA~~aL~~~a~L~~  260 (261)
                      ++.+++|||++|.+.+++++
T Consensus       136 l~~~~~ta~~al~~~~~~~~  155 (345)
T 2j3h_A          136 LGMPGMTAYAGFYEVCSPKE  155 (345)
T ss_dssp             TSHHHHHHHHHHHTTSCCCT
T ss_pred             ccccHHHHHHHHHHHhCCCC
Confidence            99999999999988888764

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.46  E-value=9.8e-14  Score=149.58  Aligned_cols=123  Identities=16%  Similarity=0.143  Sum_probs=97.0

Q ss_pred             EEEecCC--CCcEEEEeeCCC-CC--CCeEEEEEEEEEcChhhHHHHcCCCCCC-------CCCcccccceEEEEEEeCC
Q psy7798         106 AVAWEPK--KPLSLETIQVAP-PK--AGEVRIKIVSTAICHTDAYTLDGLDSEG-------KFPCVLGHEGSGIVESVGE  173 (261)
Q Consensus       106 ~~~~~~g--~~l~~~~~~~p~-~~--~~eVlVkV~a~gln~~Dv~~~~g~~~~~-------~~p~~lG~E~~G~V~~vG~  173 (261)
                      +....+|  +.+.|.+.+... +.  ++||+|+|+++|||++|+++..|.++..       ..|.++|+|++|+|     
T Consensus      1533 l~~~~~g~l~sl~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V----- 1607 (2512)
T 2vz8_A         1533 VNVLSRGDLSSIRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRD----- 1607 (2512)
T ss_dssp             EEESSTTCTTSEEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEE-----
T ss_pred             EEccCCCCcCceEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEE-----
Confidence            4444455  347887766433 33  7999999999999999999999987532       23468999999988     


Q ss_pred             CCCCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHh
Q psy7798         174 GVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVI  253 (261)
Q Consensus       174 ~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~  253 (261)
                           ++||||+++..                      .|++.++.++....+.++|+++++++||++|++++|||++|+
T Consensus      1608 -----~vGdrV~g~~~----------------------~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~ 1660 (2512)
T 2vz8_A         1608 -----ASGRRVMGMVP----------------------AEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLV 1660 (2512)
T ss_dssp             -----TTSCCEEEECS----------------------SCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHT
T ss_pred             -----ccCCEEEEeec----------------------CCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHH
Confidence                 28999998642                      145666666666888999999999999999999999999999


Q ss_pred             cccCccc
Q psy7798         254 KRRDFEK  260 (261)
Q Consensus       254 ~~a~L~~  260 (261)
                      +.+++++
T Consensus      1661 ~~a~l~~ 1667 (2512)
T 2vz8_A         1661 VRGRMQP 1667 (2512)
T ss_dssp             TTTCCCT
T ss_pred             HHhcCCC
Confidence            9898875

>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} SCOP: b.35.1.0

Probab=87.31  E-value=0.35  Score=34.25  Aligned_cols=54  Identities=26%  Similarity=0.359  Sum_probs=27.6

Q ss_pred             CCCCeEEEEEEEEEcChhhHHHHcCCC-CCCCCCcccccceEEEEEEeCCCCC---------CCCCCCEEEEe
Q psy7798         125 PKAGEVRIKIVSTAICHTDAYTLDGLD-SEGKFPCVLGHEGSGIVESVGEGVT---------SVAPGDHVIPL  187 (261)
Q Consensus       125 ~~~~eVlVkV~a~gln~~Dv~~~~g~~-~~~~~p~~lG~E~~G~V~~vG~~v~---------~~~vGDrV~~~  187 (261)
                      |-.|-|+|+....     .-.+..|.+ |...    -.--..|+|++||++..         .+++||+|+..
T Consensus         5 PL~DRVlVk~~e~-----e~kT~gGI~LP~~a----~eK~~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vl~~   68 (95)
T 3nx6_A            5 PLHDRVVVKPIEA-----DEVSAGGIVIPDSA----KEKSTKGEVVAIGAGKPLDNGSLHAPVVKVGDKVIYG   68 (95)
T ss_dssp             CCTTEEEEEEC----------------------------CEEEEEEEECSCEECTTSCEECCSCCTTCEEEEC
T ss_pred             EcCCEEEEEEccc-----cccccceEEeCccc----cCCccccEEEEECCCeECCCCCEEccccCCCCEEEEC
Confidence            3456799986532     223334432 3211    01125799999999753         58999999753

>1g31_A GP31; chaperone, CO-chaperonin, groes, in VIVO protein folding, bacteriophage T4; 2.30A {Enterobacteria phage T4} SCOP: b.35.1.1 PDB: 2cgt_O

Probab=87.07  E-value=0.54  Score=34.21  Aligned_cols=23  Identities=30%  Similarity=0.263  Sum_probs=19.7

Q ss_pred             eEEEEEEeCCCCC--CCCCCCEEEE
Q psy7798         164 GSGIVESVGEGVT--SVAPGDHVIP  186 (261)
Q Consensus       164 ~~G~V~~vG~~v~--~~~vGDrV~~  186 (261)
                      .-|.|++||+++.  .+++||+|+.
T Consensus        47 ~~g~VvAVG~g~~~~~vKvGD~Vl~   71 (111)
T 1g31_A           47 ELCVVHSVGPDVPEGFCEVGDLTSL   71 (111)
T ss_dssp             EEEEEEEECTTSCTTSCCTTCEEEE
T ss_pred             ceEEEEEECCCCccccccCCCEEEE
Confidence            4799999999875  4999999975

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=86.90  E-value=0.28  Score=40.00  Aligned_cols=33  Identities=18%  Similarity=0.082  Sum_probs=27.5

Q ss_pred             CCCCCCEEEEee-------ccCCCCCcccccCcccccccc
Q psy7798         177 SVAPGDHVIPLY-------IPQCNECKFCKSSKTNLCTKI  209 (261)
Q Consensus       177 ~~~vGDrV~~~~-------~~~~~~~~~~~~~~~~~~~~~  209 (261)
                      -|++||||++.+       ...||.|..|..|..+.|...
T Consensus         3 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~   42 (248)
T 2yvl_A            3 SFKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVI   42 (248)
T ss_dssp             CCCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTT
T ss_pred             cCCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhc
Confidence            389999999886       567889999998888888654

>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O

Probab=80.22  E-value=1.1  Score=31.87  Aligned_cols=52  Identities=25%  Similarity=0.270  Sum_probs=31.3

Q ss_pred             CCeEEEEEEEEEcChhhHHHHcCCC-CCCCCCcccccceEEEEEEeCCCC---------CCCCCCCEEEEe
Q psy7798         127 AGEVRIKIVSTAICHTDAYTLDGLD-SEGKFPCVLGHEGSGIVESVGEGV---------TSVAPGDHVIPL  187 (261)
Q Consensus       127 ~~eVlVkV~a~gln~~Dv~~~~g~~-~~~~~p~~lG~E~~G~V~~vG~~v---------~~~~vGDrV~~~  187 (261)
                      .|-|+|+....     .-.+..|.+ |...    -.--..|+|++||++.         -.+++||+|+..
T Consensus         7 ~DRVlVk~~e~-----e~kT~gGI~LP~sa----keKp~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~   68 (97)
T 1pcq_O            7 HDRVIVKRKEV-----ETKSAGGIVLTGSA----AAKSTRGEVLAVGNGRILENGEVKPLDVKVGDIVIFN   68 (97)
T ss_dssp             SSEEEEEECCT-----TCTTTTSSCCCCCC----SCCCCEEEEEEECSEECTTSSSCEECSCCTTCEEEEC
T ss_pred             CCEEEEEEccc-----cccccceEEeCccc----ccCCcccEEEEEcCceecCCCCEEecccCCCCEEEEC
Confidence            46788887632     223344432 3211    1122579999999863         238999999753

>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A

Probab=80.13  E-value=1.1  Score=31.92  Aligned_cols=24  Identities=46%  Similarity=0.520  Sum_probs=19.4

Q ss_pred             eEEEEEEeCCCCC----------CCCCCCEEEEe
Q psy7798         164 GSGIVESVGEGVT----------SVAPGDHVIPL  187 (261)
Q Consensus       164 ~~G~V~~vG~~v~----------~~~vGDrV~~~  187 (261)
                      ..|.|++||++..          .+++||+|+..
T Consensus        38 ~~G~VvAVG~G~~~~~G~~~~p~~VkvGD~Vlf~   71 (99)
T 1p3h_A           38 QEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYS   71 (99)
T ss_dssp             EEEEEEEECCCEECSSSSCEECCSCCTTCEEEEE
T ss_pred             ceEEEEEECCCcCcCCCCEEEccccCCCCEEEEC
Confidence            6799999998741          39999999764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	261
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	4e-31
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	2e-28
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	1e-26
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	2e-25
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	7e-25
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	4e-20
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	1e-19
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	9e-18
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	9e-17
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	2e-16
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	3e-14
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	4e-13
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	6e-13
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	3e-12
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	5e-12
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	4e-10
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	3e-07
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	2e-06
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	3e-05
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	6e-05
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	0.002

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  112 bits (280), Expect = 4e-31
 Identities = 85/115 (73%), Positives = 96/115 (83%)

Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAVAWE  KPLS+E I+VAPPKA EVRIKI++TA+CHTDAYTL G D EG FP 
Sbjct: 3   EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 62

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           +LGH G+GIVESVGEGVT +  GD VIPLYIPQC ECKFC + KTNLC KIR TQ
Sbjct: 63  ILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQ 117

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score =  104 bits (261), Expect = 2e-28
 Identities = 67/117 (57%), Positives = 83/117 (70%)

Query: 97  LPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKF 156
           + +VI+CKAAVAWE  KPL +E I+V  P A E+RIKI++T +CHTD Y L     +  F
Sbjct: 3   VGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGF 62

Query: 157 PCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           P VLGHEG+GIVESVG GVT   PG+ VIPL+I QC EC+FC+S KTN C K    +
Sbjct: 63  PVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANE 119

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score =  100 bits (250), Expect = 1e-26
 Identities = 62/114 (54%), Positives = 79/114 (69%), Gaps = 1/114 (0%)

Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAA+AW+   PL +E I+V+PPKA EVRI++++T +C TD    D    +  FP 
Sbjct: 5   KVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDP-KKKALFPV 63

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTT 212
           VLGHE +GIVESVG GVT+  PGD VIP + PQC  CK C S  TNLC K+R  
Sbjct: 64  VLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNF 117

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 97.6 bits (242), Expect = 2e-25
 Identities = 68/115 (59%), Positives = 81/115 (70%), Gaps = 1/115 (0%)

Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           + I CKAAVAWEP KPLSLETI VAPPKA EVRIKI+++ IC +D+  L       KFP 
Sbjct: 5   KDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKE-IIPSKFPV 63

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           +LGHE  G+VES+G GVT V PGD VIPL++PQC  C+ CKSS +N C K     
Sbjct: 64  ILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGA 118

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 96.1 bits (238), Expect = 7e-25
 Identities = 62/115 (53%), Positives = 81/115 (70%), Gaps = 1/115 (0%)

Query: 99  QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPC 158
           +VI+CKAAV WE KKP S+E ++VAPPKA EVRIK+V+T IC +D + + G       P 
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSG-TLVTPLPV 63

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
           + GHE +GIVES+GEGVT+V PGD VIPL+ PQC +C+ CK  + N C K   + 
Sbjct: 64  IAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSM 118

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 82.6 bits (203), Expect = 4e-20
 Identities = 44/113 (38%), Positives = 60/113 (53%), Gaps = 4/113 (3%)

Query: 96  SLPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLD-SEG 154
           +LPQ    KAAV      PL +E ++V  P  G+V +KI ++ +CHTD +  +G    + 
Sbjct: 1   TLPQ--TMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKP 58

Query: 155 KFPCVLGHEGSGIVESVGEGVTSVAPGDHV-IPLYIPQCNECKFCKSSKTNLC 206
             P + GHEG G V +VG GVT V  GD V IP     C  C+ C +    LC
Sbjct: 59  PLPFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLC 111

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 81.9 bits (201), Expect = 1e-19
 Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 1/110 (0%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHE 163
           KA  A+  K+PL    I    P   +V+I+I    +CH+D + +    +   +PCV GHE
Sbjct: 2   KAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHE 61

Query: 164 GSGIVESVGEGVTSVAPGDHV-IPLYIPQCNECKFCKSSKTNLCTKIRTT 212
             G V +VG+ V   APGD V +   +  C  C+ C+    N C  +  T
Sbjct: 62  IVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGT 111

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 76.9 bits (188), Expect = 9e-18
 Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 2/114 (1%)

Query: 102 ECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLG 161
           +  AAV         L+ +++  P+  EV +K+V+T +CHTD    D        P VLG
Sbjct: 3   DIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQ-KYPVPLPAVLG 61

Query: 162 HEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLF 215
           HEGSGI+E++G  VT +  GDHV+ L    C +C  C +     C++       
Sbjct: 62  HEGSGIIEAIGPNVTELQVGDHVV-LSYGYCGKCTQCNTGNPAYCSEFFGRNFS 114

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 73.8 bits (180), Expect = 9e-17
 Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 8/117 (6%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGL--------DSEGK 155
           +A    E  KPLSL+ I V  PK  +V IK+ +  +CH+D +   G         D   K
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61

Query: 156 FPCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTT 212
            P  LGHE +G +E VG+ V   + GD V          C +C+  + +LC   R  
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL 118

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 73.0 bits (178), Expect = 2e-16
 Identities = 30/135 (22%), Positives = 51/135 (37%), Gaps = 5/135 (3%)

Query: 101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVL 160
           ++  A V  +  +PL  +  +++    G + ++I+S  +C +D +   G D     P +L
Sbjct: 3   LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIIL 62

Query: 161 GHEGSGIVESVGEGVTSVAPGD-----HVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLF 215
           GHEG+G V  V      +          ++      C EC +CK SK       R     
Sbjct: 63  GHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGI 122

Query: 216 LTSNVTISDFNMGYS 230
                        YS
Sbjct: 123 NRGCSEYPHLRGCYS 137

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 66.5 bits (161), Expect = 3e-14
 Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 2/105 (1%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLD-GLDSEGKFPCVLGH 162
           KAAV  + K+PL ++ ++      GEV ++I +  +CHTD +        + K P + GH
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61

Query: 163 EGSGIVESVGEGVTSVAPGDHV-IPLYIPQCNECKFCKSSKTNLC 206
           EG GIVE VG GVT +  GD V IP     C  C +C S +  LC
Sbjct: 62  EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLC 106

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 63.9 bits (154), Expect = 4e-13
 Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 4/105 (3%)

Query: 105 AAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDG---LDSEGKFPCVLG 161
           +AV ++    L LE   +  PK  EV +++    IC +D +  +     D   K P V+G
Sbjct: 4   SAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIG 62

Query: 162 HEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLC 206
           HE SG V  VG+ V  +  GD V       C  C+FCK  K NLC
Sbjct: 63  HEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLC 107

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 63.2 bits (152), Expect = 6e-13
 Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 4/113 (3%)

Query: 104 KAAVAWEPKKPLSLETIQV-APPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFP---CV 159
           KAA   E  KPL +E +         +V ++I    +CHTD + + G+  E   P     
Sbjct: 1   KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYT 60

Query: 160 LGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTT 212
           LGHE  G +E V EGV  +  GD VI         C  C++ +   C  +   
Sbjct: 61  LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFP 113

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.5 bits (148), Expect = 3e-12
 Identities = 36/114 (31%), Positives = 47/114 (41%), Gaps = 4/114 (3%)

Query: 102 ECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEG---KFPC 158
              + V   P   L LE   +  P   EV +++ S  IC +D +  +         K P 
Sbjct: 7   NNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPM 65

Query: 159 VLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTT 212
           VLGHE SG VE VG  V  + PGD V           +FCK  + NL   I   
Sbjct: 66  VLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFC 119

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.0 bits (147), Expect = 5e-12
 Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 6/121 (4%)

Query: 96  SLPQVIECKAAVAWEPKKPLSLETIQVAPP--KAGEVRIKIVSTAICHTDAYTLDGLDSE 153
           S P+    +       +   + +  +  P      ++ IKI +  +C +D +   G    
Sbjct: 2   SYPEKF--EGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGN 59

Query: 154 GKFPCVLGHEGSGIVESVGEGVTS-VAPGDH-VIPLYIPQCNECKFCKSSKTNLCTKIRT 211
            K P V+GHE  G V  +G    S +  G    +   +  C EC  CK+     CTK  T
Sbjct: 60  MKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVT 119

Query: 212 T 212
           T
Sbjct: 120 T 120

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 55.4 bits (132), Expect = 4e-10
 Identities = 21/112 (18%), Positives = 37/112 (33%), Gaps = 1/112 (0%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHE 163
           K        K L     +     + +  ++ ++ + C +D +T+       +   +LGHE
Sbjct: 2   KGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHE 60

Query: 164 GSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLF 215
             G V  VG  V    PGD VI             ++        +     F
Sbjct: 61  AVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKF 112

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 47.2 bits (111), Expect = 3e-07
 Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 9/117 (7%)

Query: 104 KAAVAWEPKKPLSLETIQV-------APPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKF 156
           +  V     K + ++ I                V +K+VST IC +D + + G  +  + 
Sbjct: 3   RGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRG-RTTAQV 60

Query: 157 PCVLGHEGSGIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ 213
             VLGHE +G V   G  V ++  GD V   +   C  C+ CK   T +C  +   +
Sbjct: 61  GLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPAR 117

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 43.7 bits (102), Expect = 2e-06
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 104 KAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAY 145
           KA V      PL L  +     + GEV +++ +  +   D  
Sbjct: 2   KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHL 43

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 41.0 bits (95), Expect = 3e-05
 Identities = 13/91 (14%), Positives = 27/91 (29%), Gaps = 3/91 (3%)

Query: 104 KAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLG 161
           +A V  + +      ++TI +     G+V +++  +++ + D           K      
Sbjct: 5   QAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKT-YPFV 63

Query: 162 HEGSGIVESVGEGVTSVAPGDHVIPLYIPQC 192
                    V         GD VI       
Sbjct: 64  PGIDLAGVVVSSQHPRFREGDEVIATGYEIG 94

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 40.5 bits (93), Expect = 6e-05
 Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 5/64 (7%)

Query: 100 VIECKAAVAWE---PKKPLSLETIQVAPP--KAGEVRIKIVSTAICHTDAYTLDGLDSEG 154
           +I  +A +  +   PK  L  ++ ++        EV +K + + +  +D   + G+    
Sbjct: 1   MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSK 60

Query: 155 KFPC 158
               
Sbjct: 61  PAKT 64

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 35.8 bits (81), Expect = 0.002
 Identities = 17/57 (29%), Positives = 23/57 (40%)

Query: 115 LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESV 171
           L       A P   E++++  +  I   D Y   GL      P  LG E +GIV  V
Sbjct: 15  LQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKV 71

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	261
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.98
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.97
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.97
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.97
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.97
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.96
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.96
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.96
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.96
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.96
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.96
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.95
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.95
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.95
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.95
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.95
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.94
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.94
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.94
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.93
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.91
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.91
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.87
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.8
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.49
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.43
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	92.75
d1p3ha_	99	Chaperonin-10 (GroES) {Mycobacterium tuberculosis	81.11

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.98  E-value=2.8e-32  Score=224.43  Aligned_cols=164  Identities=44%  Similarity=0.703  Sum_probs=147.1

Q ss_pred             CCCcceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCC
Q psy7798          96 SLPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGV  175 (261)
Q Consensus        96 ~~~~~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v  175 (261)
                      +.+.++++|++++.+++++|++++++.|.|++|||+|||.|+|||++|++.+.|..+...+|.++|||++|+|+++|+++
T Consensus         2 ~~~~~~~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~~~p~i~GhE~~G~v~~vG~~v   81 (199)
T d1cdoa1           2 TVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGV   81 (199)
T ss_dssp             CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCEEEEEEEECTTC
T ss_pred             CCCCceEEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhcccccccccccccccceEEEEEcCCC
Confidence            34677899999999999999999999999999999999999999999999999977767789999999999999999999


Q ss_pred             CCCCCCCEEEEeeccCCCCCcccccCccccccccc--------------------------cccceeeeeeeeccccccc
Q psy7798         176 TSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIR--------------------------TTQLFLTSNVTISDFNMGY  229 (261)
Q Consensus       176 ~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~g~~~~~~~~~~~~~~~  229 (261)
                      ++|++||||++.+...|+.|.+|..+..+.|....                          ..|+|+++.++.....+++
T Consensus        82 ~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~i  161 (199)
T d1cdoa1          82 TEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKI  161 (199)
T ss_dssp             CSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEEC
T ss_pred             ceecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEEC
Confidence            99999999999999999999999999999996531                          1256666666666889999


Q ss_pred             CCCCChhhhccccchHHHHHHHHhcccCcc
Q psy7798         230 SMTGSLERGSKRDNSFQTTHFAVIKRRDFE  259 (261)
Q Consensus       230 ~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~  259 (261)
                      |++++++++|+++.++.|++.+|...++.+
T Consensus       162 P~~~~~~~aa~l~~~l~t~~~av~~~~~~~  191 (199)
T d1cdoa1         162 DPSVKLDEFITHRMPLESVNDAIDLMKHGK  191 (199)
T ss_dssp             CTTSCCGGGEEEEEEGGGHHHHHHHHHTTC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999998776654

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.97  E-value=3.2e-31  Score=218.50  Aligned_cols=157  Identities=43%  Similarity=0.705  Sum_probs=139.8

Q ss_pred             CCCcceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCC
Q psy7798          96 SLPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGV  175 (261)
Q Consensus        96 ~~~~~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v  175 (261)
                      +...+++||++++.+++++|++++++.|.|+++||+|||.++|||++|++.+.|.++ ..+|.++|||++|+|+++|++|
T Consensus         2 ~~~~~~~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~v~GHE~~G~V~~vG~~V   80 (202)
T d1e3ia1           2 TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKK-ALFPVVLGHECAGIVESVGPGV   80 (202)
T ss_dssp             CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSC-CCSSBCCCCEEEEEEEEECTTC
T ss_pred             CCCCeEEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeecc-cccccccccccceEEeeecCCc
Confidence            356789999999999999999999999999999999999999999999999999876 4578999999999999999999


Q ss_pred             CCCCCCCEEEEeeccCCCCCcccccCccccccccccc------------------------------cceeeeeeeeccc
Q psy7798         176 TSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTT------------------------------QLFLTSNVTISDF  225 (261)
Q Consensus       176 ~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~g~~~~~~~~~~~  225 (261)
                      ++|++||||++.+...|+.|..|..+..+.|......                              |+|+++.++....
T Consensus        81 ~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~  160 (202)
T d1e3ia1          81 TNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEAN  160 (202)
T ss_dssp             CSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGG
T ss_pred             eeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhh
Confidence            9999999999998899999999999999999754322                              4455555555577


Q ss_pred             ccccCCCCChhhhccccchHHHHHHHHh
Q psy7798         226 NMGYSMTGSLERGSKRDNSFQTTHFAVI  253 (261)
Q Consensus       226 ~~~~~~~~s~~eaA~lp~~~~TA~~aL~  253 (261)
                      ..++|++++++.++++++++.|++.+|.
T Consensus       161 l~~lP~~~~~~~~~~~~~~~~~~~~a~~  188 (202)
T d1e3ia1         161 LARVDDEFDLDLLVTHALPFESINDAID  188 (202)
T ss_dssp             EEECCTTSCGGGGEEEEEEGGGHHHHHH
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            8899999999999999999999999873

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.97  E-value=5.1e-31  Score=216.43  Aligned_cols=156  Identities=57%  Similarity=0.893  Sum_probs=140.9

Q ss_pred             cceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCC
Q psy7798          99 QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSV  178 (261)
Q Consensus        99 ~~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~  178 (261)
                      ..++||++++.+++++|+++++|.|.|+++||+|||+++|||++|++++.|.++...+|.++|||++|+|+++|++|+.+
T Consensus         3 ~~~~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~~~p~v~GhE~~G~V~~vG~~V~~~   82 (197)
T d2fzwa1           3 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKL   82 (197)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCSC
T ss_pred             CceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccccccccCCcceeeEEEeecCCceec
Confidence            34789999999999999999999999999999999999999999999999987777889999999999999999999999


Q ss_pred             CCCCEEEEeeccCCCCCcccccCcccccccccc--------------------------ccceeeeeeeecccccccCCC
Q psy7798         179 APGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT--------------------------TQLFLTSNVTISDFNMGYSMT  232 (261)
Q Consensus       179 ~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~g~~~~~~~~~~~~~~~~~~  232 (261)
                      ++||||++.+..+|+.|..|..+..+.|.....                          .|+|+++.++.....+++|++
T Consensus        83 ~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp~~  162 (197)
T d2fzwa1          83 KAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPL  162 (197)
T ss_dssp             CTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTT
T ss_pred             CCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEEECCCC
Confidence            999999999989999999999999999964211                          156666666666888999999


Q ss_pred             CChhhhccccchHHHHHHHHhc
Q psy7798         233 GSLERGSKRDNSFQTTHFAVIK  254 (261)
Q Consensus       233 ~s~~eaA~lp~~~~TA~~aL~~  254 (261)
                      ++++++|++++++.|++.+|..
T Consensus       163 l~~~~aa~~~~~~~t~~~a~~~  184 (197)
T d2fzwa1         163 IKVDEFVTHNLSFDEINKAFEL  184 (197)
T ss_dssp             SCSGGGEEEEEEGGGHHHHHHH
T ss_pred             CCHHHHhhhhhHHHHHHHHHHh
Confidence            9999999999999999999843

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.97  E-value=4.4e-30  Score=206.96  Aligned_cols=159  Identities=25%  Similarity=0.372  Sum_probs=138.2

Q ss_pred             cceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCC
Q psy7798          99 QVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTS  177 (261)
Q Consensus        99 ~~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~  177 (261)
                      .|.+||++++.++|++|++++++.|.|++|||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++|++
T Consensus         2 ~P~tMkA~v~~~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~~v~~   81 (175)
T d1llua1           2 LPQTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTR   81 (175)
T ss_dssp             CCSEEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCS
T ss_pred             cchhcEEEEEEeCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCCCccc
Confidence            4678999999999999999999999999999999999999999999999998764 567899999999999999999999


Q ss_pred             CCCCCEEEEee-ccCCCCCcccccCccccccccccc-----cceeeeeeeecccccccCCCCChhhhccccchHHHHHHH
Q psy7798         178 VAPGDHVIPLY-IPQCNECKFCKSSKTNLCTKIRTT-----QLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFA  251 (261)
Q Consensus       178 ~~vGDrV~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~a  251 (261)
                      |++||||+..+ ...|+.|..|..+..+.|......     |+|+.+.++....++++|++++++.+|++..++.|++.+
T Consensus        82 ~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~~~~~t~~~~  161 (175)
T d1llua1          82 VKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQ  161 (175)
T ss_dssp             CCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTCCCCEEEECGGGHHHHHHH
T ss_pred             cccCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHHEEECCCCCChhHHHHHHhHHHHHHHH
Confidence            99999998654 457999999999999999866433     355555555557888999999999999999999999988


Q ss_pred             HhcccCc
Q psy7798         252 VIKRRDF  258 (261)
Q Consensus       252 L~~~a~L  258 (261)
                      + +.+.+
T Consensus       162 ~-~~g~~  167 (175)
T d1llua1         162 M-RAGQI  167 (175)
T ss_dssp             H-HTTCC
T ss_pred             H-HhCCC
Confidence            7 34443

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.97  E-value=2.1e-30  Score=209.46  Aligned_cols=156  Identities=26%  Similarity=0.358  Sum_probs=132.6

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCC---CCCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDS---EGKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~---~~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      +.++++.++++ |++++++.|+|+++||+|||+++|||++|++.+.|...   ....|.++|||++|+|+++|++|++|+
T Consensus         2 ~maAVl~g~~~-l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~   80 (178)
T d1e3ja1           2 NLSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLK   80 (178)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCC
T ss_pred             ceEEEEEcCCc-EEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCC
Confidence            34555667766 99999999999999999999999999999998876432   234678999999999999999999999


Q ss_pred             CCCEEEEeeccCCCCCcccccCcccccccccc------ccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHh
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT------TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVI  253 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~  253 (261)
                      +||||+..+...|+.|..|..+..+.|.....      .|+|+.+.++.....+++|+++++++||+++..+.|||+++ 
T Consensus        81 ~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~a~-  159 (178)
T d1e3ja1          81 KGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAF-  159 (178)
T ss_dssp             TTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHHHHH-
T ss_pred             CCCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHHHHH-
Confidence            99999998888999999999999999976532      24555555666678889999999999999999999999998 


Q ss_pred             cccCccc
Q psy7798         254 KRRDFEK  260 (261)
Q Consensus       254 ~~a~L~~  260 (261)
                      +.+++++
T Consensus       160 ~~~~~~~  166 (178)
T d1e3ja1         160 EAARKKA  166 (178)
T ss_dssp             HHHHHCC
T ss_pred             HHhCCCC
Confidence            5677654

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.96  E-value=5.6e-30  Score=205.69  Aligned_cols=154  Identities=24%  Similarity=0.343  Sum_probs=134.6

Q ss_pred             eEEEEecCCCCcEEEEeeCCCC-CCCeEEEEEEEEEcChhhHHHHcCCCC---CCCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         104 KAAVAWEPKKPLSLETIQVAPP-KAGEVRIKIVSTAICHTDAYTLDGLDS---EGKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       104 ~~~~~~~~g~~l~~~~~~~p~~-~~~eVlVkV~a~gln~~Dv~~~~g~~~---~~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      |++++.++|++|++++++.|.+ +++||+|||.++|||++|++.+.|.++   ...+|.++|||++|+|+++|++|++|+
T Consensus         1 kA~~~~~~g~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~   80 (171)
T d1h2ba1           1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE   80 (171)
T ss_dssp             CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCC
T ss_pred             CEEEEEeCCCCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCC
Confidence            5788999999999999999975 789999999999999999999998764   245789999999999999999999999


Q ss_pred             CCCEEEEeeccCCCCCcccccCccccccccccc-----cceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhc
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTT-----QLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIK  254 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~  254 (261)
                      +||||++.+...|+.|..|..+..+.|......     |+++.+..+....++++|++++++.+|+++..+.|||++| +
T Consensus        81 ~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~al-~  159 (171)
T d1h2ba1          81 KGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERL-E  159 (171)
T ss_dssp             TTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHHHH-H
T ss_pred             CCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHHHH-H
Confidence            999999988899999999999999999765322     4455555555578899999999999999999999999999 4


Q ss_pred             ccCc
Q psy7798         255 RRDF  258 (261)
Q Consensus       255 ~a~L  258 (261)
                      .+++
T Consensus       160 ~~~~  163 (171)
T d1h2ba1         160 KGEV  163 (171)
T ss_dssp             TTCC
T ss_pred             hcCC
Confidence            5665

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=1.8e-29  Score=206.23  Aligned_cols=162  Identities=18%  Similarity=0.197  Sum_probs=135.9

Q ss_pred             CcceeeeEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCC
Q psy7798          98 PQVIECKAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGV  175 (261)
Q Consensus        98 ~~~~~~~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v  175 (261)
                      +.|.+|+++.+.++++.  +++.+.+.++++++||+|||.++|||++|++.+.|.++...+|.++|||++|+|+++|+++
T Consensus         2 ~~P~~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~~~P~i~GHE~~G~Vv~vG~~v   81 (192)
T d1piwa1           2 SYPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKS   81 (192)
T ss_dssp             CTTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTC
T ss_pred             CCCceeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCCCCCCcCcccccccchhhccccc
Confidence            45678999999888754  6777777777899999999999999999999999998878889999999999999999988


Q ss_pred             -CCCCCCCEEEEee-ccCCCCCcccccCccccccccc------------cccceeeeeeeecccccccCCCCChhhhccc
Q psy7798         176 -TSVAPGDHVIPLY-IPQCNECKFCKSSKTNLCTKIR------------TTQLFLTSNVTISDFNMGYSMTGSLERGSKR  241 (261)
Q Consensus       176 -~~~~vGDrV~~~~-~~~~~~~~~~~~~~~~~~~~~~------------~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~l  241 (261)
                       +.+++||||...+ ...|+.|..|..+..+.|....            ..|+|+.+.++.....+++|+++++++||.+
T Consensus        82 ~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~Aal~  161 (192)
T d1piwa1          82 NSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVG  161 (192)
T ss_dssp             CSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCEEEEESS
T ss_pred             ccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCHHHHHHH
Confidence             6799999997654 4579999999999999998642            2256666666666888999999999887655


Q ss_pred             cchHHHHHHHHhcccCccc
Q psy7798         242 DNSFQTTHFAVIKRRDFEK  260 (261)
Q Consensus       242 p~~~~TA~~aL~~~a~L~~  260 (261)
                      ..++.|||.+| ++++++.
T Consensus       162 ~~~~~ta~~~l-~~~~vk~  179 (192)
T d1piwa1         162 EAGVHEAFERM-EKGDVRY  179 (192)
T ss_dssp             HHHHHHHHHHH-HHTCCSS
T ss_pred             HHHHHHHHHHH-HHhCCCC
Confidence            55578999998 5788875

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.96  E-value=3.9e-29  Score=201.77  Aligned_cols=155  Identities=25%  Similarity=0.284  Sum_probs=131.4

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCC--------CCCCCcccccceEEEEEEeCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDS--------EGKFPCVLGHEGSGIVESVGEG  174 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~--------~~~~p~~lG~E~~G~V~~vG~~  174 (261)
                      ||++++.++|++|++++++.|.|++|||+|||+++|||++|++++.|.++        ...+|.++|||++|+|+++|++
T Consensus         1 MKA~~~~~~G~pl~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~   80 (177)
T d1jvba1           1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (177)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEEeCCCCCEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccC
Confidence            89999999999999999999999999999999999999999999998753        2457899999999999999999


Q ss_pred             CCCCCCCCEEEEeeccCCCCCcccccCcccccccccccc----ceeeeeeeec-ccccccCCCCChhhhcccc-chHHHH
Q psy7798         175 VTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQ----LFLTSNVTIS-DFNMGYSMTGSLERGSKRD-NSFQTT  248 (261)
Q Consensus       175 v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~~~-~~~~~~~~~~s~~eaA~lp-~~~~TA  248 (261)
                      |++|++||||++.+...|+.|..|..+..+.|......|    |++++|+.++ ...+..++++++.++|+++ .++.+|
T Consensus        81 v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~~~~~~~~~a~~~~~~~~~a  160 (177)
T d1jvba1          81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEA  160 (177)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEECSSSCCCCEEEEEGGGHHHH
T ss_pred             ccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEECCCCChHHHHHHHHHHHHHH
Confidence            999999999999888899999999999999998764432    5667776665 4445555667777777765 588899


Q ss_pred             HHHHhcccCc
Q psy7798         249 HFAVIKRRDF  258 (261)
Q Consensus       249 ~~aL~~~a~L  258 (261)
                      ++++ ..+++
T Consensus       161 ~~~~-~~~~~  169 (177)
T d1jvba1         161 IDNL-ENFKA  169 (177)
T ss_dssp             HHHH-HTTCC
T ss_pred             HHHH-Hhhcc
Confidence            9988 45543

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=7.2e-29  Score=200.48  Aligned_cols=155  Identities=26%  Similarity=0.402  Sum_probs=126.6

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGD  182 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGD  182 (261)
                      ||++...+++++|++.+++.|.|++|||+|||+++|||++|++.+.|.++...+|.++|||++|+|+++|++|++|++||
T Consensus         1 m~a~~~~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~~~P~i~GhE~~G~V~~vG~~V~~~~vGd   80 (179)
T d1uufa1           1 IKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGD   80 (179)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCCTTC
T ss_pred             CeEEEEccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeeccccccccccccccccchhhccccccCCCCC
Confidence            78999999999999999999999999999999999999999999999887778899999999999999999999999999


Q ss_pred             EEEEee-ccCCCCCcccccCcccccccccc-------------ccceeeeeeeecccccccCCCCChhhhccccchHHHH
Q psy7798         183 HVIPLY-IPQCNECKFCKSSKTNLCTKIRT-------------TQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTT  248 (261)
Q Consensus       183 rV~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------------~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA  248 (261)
                      ||...+ ...|++|..|..+..+.|.....             .|+|+.+.++....++++|+......   +...+.+|
T Consensus        81 rV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~~~---~a~~l~~a  157 (179)
T d1uufa1          81 LVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEMI---RADQINEA  157 (179)
T ss_dssp             EEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCEEEE---CGGGHHHH
T ss_pred             EEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCcChh---HhchhHHH
Confidence            996554 46899999999999999976421             14455555555567778885442222   22356788


Q ss_pred             HHHHhcccCcccC
Q psy7798         249 HFAVIKRRDFEKR  261 (261)
Q Consensus       249 ~~aL~~~a~L~~r  261 (261)
                      |+++ .++.++-|
T Consensus       158 ~~a~-~~a~v~~r  169 (179)
T d1uufa1         158 YERM-LRGDVKYR  169 (179)
T ss_dssp             HHHH-HTTCSSSE
T ss_pred             HHHH-HHhCcccc
Confidence            8887 46777654

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.96  E-value=1.2e-28  Score=201.67  Aligned_cols=150  Identities=28%  Similarity=0.455  Sum_probs=127.7

Q ss_pred             eeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCC
Q psy7798         101 IECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAP  180 (261)
Q Consensus       101 ~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~v  180 (261)
                      ++|+++++.+.+++|++++++.|.|++|||+|||.++|||++|++.+.|.++ ..+|.++|||++|+|+++|++|++|++
T Consensus         2 k~~~Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~i~GHE~~G~V~~vG~~v~~~~v   80 (194)
T d1f8fa1           2 KDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTELQV   80 (194)
T ss_dssp             EEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCSCCT
T ss_pred             ceeEEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhccc-ccCCcccccceEEEeeecCccceeEcc
Confidence            4689999999999999999999999999999999999999999999999876 468999999999999999999999999


Q ss_pred             CCEEEEeeccCCCCCcccccCcccccccccc----------------------------ccceeeeeeeecccccccCCC
Q psy7798         181 GDHVIPLYIPQCNECKFCKSSKTNLCTKIRT----------------------------TQLFLTSNVTISDFNMGYSMT  232 (261)
Q Consensus       181 GDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~g~~~~~~~~~~~~~~~~~~  232 (261)
                      ||||+..+ ..|+.|.+|..+..+.|+....                            .++|.++.++.....+++|++
T Consensus        81 GDrVv~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip~~  159 (194)
T d1f8fa1          81 GDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKD  159 (194)
T ss_dssp             TCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTT
T ss_pred             Cceeeeec-ccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEECCCC
Confidence            99996655 5899999999999999985310                            023444445555678899999


Q ss_pred             CChhhhccccchHHHHHHHH
Q psy7798         233 GSLERGSKRDNSFQTTHFAV  252 (261)
Q Consensus       233 ~s~~eaA~lp~~~~TA~~aL  252 (261)
                      +++++++.+.....+.+.++
T Consensus       160 i~~~~~~~i~g~g~~g~~ai  179 (194)
T d1f8fa1         160 FPFDQLVKFYAFDEINQAAI  179 (194)
T ss_dssp             CCGGGGEEEEEGGGHHHHHH
T ss_pred             CCcccEEEEeCcHHHHHHHH
Confidence            99999998766666666665

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.96  E-value=9.8e-29  Score=200.37  Aligned_cols=153  Identities=23%  Similarity=0.354  Sum_probs=127.2

Q ss_pred             ceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCC---
Q psy7798         100 VIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVT---  176 (261)
Q Consensus       100 ~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~---  176 (261)
                      ++.||++++.+++++|++++++.|.|+++||+|||.++|||++|++++.|.++...+|.++|||++|+|+++|++|+   
T Consensus         2 ~~k~kA~v~~~~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~~~P~vlGHE~~G~V~~vG~~v~~~~   81 (184)
T d1vj0a1           2 GLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLN   81 (184)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEESSCCBCTT
T ss_pred             CceEEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCccccccccceeeeeeeeEEeccccccc
Confidence            46799999999999999999999999999999999999999999999999988777899999999999999999986   


Q ss_pred             --CCCCCCEEEEeeccCCCCCcccccCccc-ccccccc-------------ccceeeeeeeec-ccccccCCCCChhhhc
Q psy7798         177 --SVAPGDHVIPLYIPQCNECKFCKSSKTN-LCTKIRT-------------TQLFLTSNVTIS-DFNMGYSMTGSLERGS  239 (261)
Q Consensus       177 --~~~vGDrV~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------~~g~~~~~~~~~-~~~~~~~~~~s~~eaA  239 (261)
                        ++++||||+..+..+|+.|.+|..+... .|++...             .|+|+++.++.+ ...+++|++++++++ 
T Consensus        82 ~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~l~~~~p-  160 (184)
T d1vj0a1          82 GELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITHRLP-  160 (184)
T ss_dssp             SCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTCCEEEE-
T ss_pred             cccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCCCCHHHH-
Confidence              4689999999988899999999999864 5654422             345555555545 567889999997642 


Q ss_pred             cccchHHHHHHHHhcccCcc
Q psy7798         240 KRDNSFQTTHFAVIKRRDFE  259 (261)
Q Consensus       240 ~lp~~~~TA~~aL~~~a~L~  259 (261)
                           +.+|+++| ++++++
T Consensus       161 -----l~~A~~a~-~~~~~~  174 (184)
T d1vj0a1         161 -----LKEANKAL-ELMESR  174 (184)
T ss_dssp             -----GGGHHHHH-HHHHHT
T ss_pred             -----HHHHHHHH-HHhCCC
Confidence                 34677777 455554

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.2e-28  Score=190.09  Aligned_cols=137  Identities=20%  Similarity=0.210  Sum_probs=119.6

Q ss_pred             eeeEEEEecCCCC--cEEE-EeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCC
Q psy7798         102 ECKAAVAWEPKKP--LSLE-TIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTS  177 (261)
Q Consensus       102 ~~~~~~~~~~g~~--l~~~-~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~  177 (261)
                      -||+++++++|++  |++. +++.|.|++|||+|||+++|||+.|++...|.++. ..+|.++|||++|+|+++|++|++
T Consensus         2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (150)
T d1yb5a1           2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA   81 (150)
T ss_dssp             EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTT
T ss_pred             ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceeec
Confidence            4899999998876  7774 68999999999999999999999999999997764 457889999999999999999999


Q ss_pred             CCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccC
Q psy7798         178 VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRD  257 (261)
Q Consensus       178 ~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~  257 (261)
                      |++||||++....                     .|+++++..+..+.+.++|+++++++||++|++++|||++++..++
T Consensus        82 ~~vGdrV~~~~~~---------------------~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~g~  140 (150)
T d1yb5a1          82 FKKGDRVFTSSTI---------------------SGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGS  140 (150)
T ss_dssp             CCTTCEEEESCCS---------------------SCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHHHHHSS
T ss_pred             cccCccccccccc---------------------cccccccccccccccccccCCCCHHHHHHhhhhhhhehhhheEEcC
Confidence            9999999875421                     1566666666678889999999999999999999999999998887


Q ss_pred             cc
Q psy7798         258 FE  259 (261)
Q Consensus       258 L~  259 (261)
                      ++
T Consensus       141 ~~  142 (150)
T d1yb5a1         141 GA  142 (150)
T ss_dssp             CC
T ss_pred             cc
Confidence            65

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.95  E-value=5.9e-28  Score=198.21  Aligned_cols=150  Identities=45%  Similarity=0.741  Sum_probs=128.6

Q ss_pred             CCcceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCC
Q psy7798          97 LPQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVT  176 (261)
Q Consensus        97 ~~~~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~  176 (261)
                      ....++||++++.+++++|++++++.|.|+++||+|||.++|||++|++.+.|.++ ..+|.++|||++|+|+++|++|+
T Consensus         3 ~~~~~k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~-~~~P~i~GHE~~G~Vv~vG~~v~   81 (198)
T d2jhfa1           3 AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV-TPLPVIAGHEAAGIVESIGEGVT   81 (198)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC-CCSSBCCCCSEEEEEEEECTTCC
T ss_pred             CCCceEEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCcc-cccceecccceeEEEEecCcccc
Confidence            45678999999999999999999999999999999999999999999999999877 46789999999999999999999


Q ss_pred             CCCCCCEEEEeeccCCCCCcccccCcccccccccc--------------------------ccceeeeeeeecccccccC
Q psy7798         177 SVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRT--------------------------TQLFLTSNVTISDFNMGYS  230 (261)
Q Consensus       177 ~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~g~~~~~~~~~~~~~~~~  230 (261)
                      ++++||||++.+...|+.|..|..+..+.|.....                          .|+|+.+.++....+.++|
T Consensus        82 ~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~p  161 (198)
T d2jhfa1          82 TVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKID  161 (198)
T ss_dssp             SCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECC
T ss_pred             CcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeEECC
Confidence            99999999998889999999999999999876432                          1345554455557788999


Q ss_pred             CCCChhhhccccchHHH
Q psy7798         231 MTGSLERGSKRDNSFQT  247 (261)
Q Consensus       231 ~~~s~~eaA~lp~~~~T  247 (261)
                      ++++++.+++...++.+
T Consensus       162 ~~~~~e~l~~~~~~~~~  178 (198)
T d2jhfa1         162 AAFALDPLITHVLPFEK  178 (198)
T ss_dssp             TTSCCGGGEEEEEEGGG
T ss_pred             CCCCHHHHHHHHHHHHh
Confidence            99988877765554443

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.95  E-value=2.6e-28  Score=196.82  Aligned_cols=140  Identities=16%  Similarity=0.095  Sum_probs=121.5

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPGD  182 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vGD  182 (261)
                      ||++++.++++ +++.+.|.|.|+++||+|||+++|||++|++.+.+..+...+|.++|||++|+|+++|++|++|++||
T Consensus         1 MKa~v~~~~~~-l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~~~P~i~GhE~~G~V~~vG~~v~~~~vGd   79 (177)
T d1jqba1           1 MKGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGD   79 (177)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTCCCSSEECCCCEEEEEEEECTTCCSCCTTC
T ss_pred             CeEEEEEeCCC-eEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCCCCCCccCcceeeEEeeecccccceecCCC
Confidence            79999999987 99999999999999999999999999999988765555567789999999999999999999999999


Q ss_pred             EEEEeeccCCCCCcccccCcccccccccc-------ccceeeeeeeecc---cccccCCCCChhhhccccc
Q psy7798         183 HVIPLYIPQCNECKFCKSSKTNLCTKIRT-------TQLFLTSNVTISD---FNMGYSMTGSLERGSKRDN  243 (261)
Q Consensus       183 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~---~~~~~~~~~s~~eaA~lp~  243 (261)
                      ||+..+..+|++|..|..+..+.|.....       ..|++++|+.++.   ...++|+++++++++....
T Consensus        80 rV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~~  150 (177)
T d1jqba1          80 RVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVY  150 (177)
T ss_dssp             EEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEEE
T ss_pred             cEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHHH
Confidence            99998888999999999999999976421       2356677776663   4689999999998876544

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.95  E-value=1.7e-27  Score=195.35  Aligned_cols=152  Identities=45%  Similarity=0.751  Sum_probs=126.2

Q ss_pred             CcceeeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCC
Q psy7798          98 PQVIECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTS  177 (261)
Q Consensus        98 ~~~~~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~  177 (261)
                      ....+||++++.+++++|++++++.|.|+++||+|||.|+|||++|++.+.|.++ ..+|.++|||++|+|+++|++|++
T Consensus         4 ~~~~~~KAav~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~-~~~P~i~GHE~~G~Vv~~G~~v~~   82 (198)
T d1p0fa1           4 GKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIGAGVTC   82 (198)
T ss_dssp             TSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEEECTTCCS
T ss_pred             CCceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeeccc-cccccccceeeeeeeeecCccccc
Confidence            4567999999999999999999999999999999999999999999999999887 468999999999999999999999


Q ss_pred             CCCCCEEEEeeccCCCCCcccccCccccccccccc-------------------------cceeeeeeeec-ccccccCC
Q psy7798         178 VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTT-------------------------QLFLTSNVTIS-DFNMGYSM  231 (261)
Q Consensus       178 ~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~g~~~~~~~~~-~~~~~~~~  231 (261)
                      |++||||++.+..+|+.|.+|..+..+.|......                         .+.+++++.++ ....++|+
T Consensus        83 ~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip~  162 (198)
T d1p0fa1          83 VKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDP  162 (198)
T ss_dssp             CCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECT
T ss_pred             CcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEECCC
Confidence            99999999988899999999999999999743321                         12234444444 55667788


Q ss_pred             CCChhhhccccchHHHHHH
Q psy7798         232 TGSLERGSKRDNSFQTTHF  250 (261)
Q Consensus       232 ~~s~~eaA~lp~~~~TA~~  250 (261)
                      +++++.++...+.+.+...
T Consensus       163 ~~~~~~~~~~~~~~~~v~~  181 (198)
T d1p0fa1         163 KINVNFLVSTKLTLDQINK  181 (198)
T ss_dssp             TSCGGGGEEEEECGGGHHH
T ss_pred             CCCHHHHHHhhcchhhcCC
Confidence            8877776666665554443

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.4e-27  Score=193.91  Aligned_cols=150  Identities=25%  Similarity=0.236  Sum_probs=125.4

Q ss_pred             eeeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCC---CCCCCcccccceEEEEEEeCCCCCCC
Q psy7798         102 ECKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDS---EGKFPCVLGHEGSGIVESVGEGVTSV  178 (261)
Q Consensus       102 ~~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~---~~~~p~~lG~E~~G~V~~vG~~v~~~  178 (261)
                      .+.+++++++++ |++++++.|.|+++||+|||+++|||++|++.+.+...   ...+|.++|||++|+|+++|++|++|
T Consensus         7 ~~~a~V~~gp~~-l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~   85 (185)
T d1pl8a1           7 NNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHL   85 (185)
T ss_dssp             CCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSC
T ss_pred             CCEEEEEeCCCe-EEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceeee
Confidence            578999999876 99999999999999999999999999999999875421   24567899999999999999999999


Q ss_pred             CCCCEEEEeeccCCCCCcccccCccccccccccc------cceeeeeeeecccccccCCCCChhhhccccch-HHHHHHH
Q psy7798         179 APGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTT------QLFLTSNVTISDFNMGYSMTGSLERGSKRDNS-FQTTHFA  251 (261)
Q Consensus       179 ~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~-~~TA~~a  251 (261)
                      ++||||+..+...|+.|.+|..+..+.|......      |++.++.++....++++|+++++++|+.+|++ .++||..
T Consensus        86 ~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~pl~~a~~a~~~  165 (185)
T d1pl8a1          86 KPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFPLEKALEAFET  165 (185)
T ss_dssp             CTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEEEGGGHHHHHHH
T ss_pred             cccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999988889999999999999999865443      23444445555788999999999999988753 4455544


Q ss_pred             H
Q psy7798         252 V  252 (261)
Q Consensus       252 L  252 (261)
                      +
T Consensus       166 ~  166 (185)
T d1pl8a1         166 F  166 (185)
T ss_dssp             H
T ss_pred             h
Confidence            3

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=5.6e-27  Score=179.88  Aligned_cols=124  Identities=16%  Similarity=0.083  Sum_probs=111.1

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      ||++++.++|+++++.+.+.|.|++|||+|||+++|||++|++.+.|.++. ..+|+++|+|++|+|           +|
T Consensus         1 MkA~~~~~~G~~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V-----------vG   69 (131)
T d1iz0a1           1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV-----------EG   69 (131)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE-----------TT
T ss_pred             CcEEEEccCCCCCEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee-----------cc
Confidence            799999999999999999999999999999999999999999999998765 468999999999999           49


Q ss_pred             CEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccCcc
Q psy7798         182 DHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRDFE  259 (261)
Q Consensus       182 DrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~L~  259 (261)
                      |||+++..                      .|++.++..+..+.+.++|+++++++||+++.+++|||++|++++++.
T Consensus        70 d~V~~~~~----------------------~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~g~~g  125 (131)
T d1iz0a1          70 RRYAALVP----------------------QGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRGHTG  125 (131)
T ss_dssp             EEEEEECS----------------------SCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCTTCCB
T ss_pred             ceEEEEec----------------------cCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhcccCC
Confidence            99988652                      155666666777889999999999999999999999999999988764

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=2.1e-26  Score=180.20  Aligned_cols=135  Identities=20%  Similarity=0.257  Sum_probs=113.8

Q ss_pred             eEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCCCCCCCC
Q psy7798         104 KAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       104 ~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      ..+.++++|++  |++.+.+.|.|++|||+|||+|+|||++|++++.|.++...+|.++|+|++|+|+++|++|++|++|
T Consensus         2 ~~i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vG   81 (147)
T d1qora1           2 TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAG   81 (147)
T ss_dssp             EEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             eEEEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCCCcceeeeccccccceeeeeeeccccccc
Confidence            35677888876  8999999999999999999999999999999999998877889999999999999999999999999


Q ss_pred             CEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChh--hhccccchHHHHHHHHhcccCcc
Q psy7798         182 DHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLE--RGSKRDNSFQTTHFAVIKRRDFE  259 (261)
Q Consensus       182 DrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~--eaA~lp~~~~TA~~aL~~~a~L~  259 (261)
                      |||+.....                     .|++.++..+..+...++|++++++  +++++|+.+.|++++|++ ++++
T Consensus        82 drV~~~~~~---------------------~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~~-~~~~  139 (147)
T d1qora1          82 DRVVYAQSA---------------------LGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILE-SRAT  139 (147)
T ss_dssp             CEEEESCCS---------------------SCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHHH-TTCC
T ss_pred             ceeeeeccc---------------------cccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHHH-hCCC
Confidence            999753311                     1556666667778889999988776  556778899999999865 5565


Q ss_pred             c
Q psy7798         260 K  260 (261)
Q Consensus       260 ~  260 (261)
                      +
T Consensus       140 ~  140 (147)
T d1qora1         140 Q  140 (147)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.94  E-value=3.2e-26  Score=183.38  Aligned_cols=153  Identities=27%  Similarity=0.464  Sum_probs=125.5

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCC-CCCCCCcccccceEEEEEEeCCCCCCCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLD-SEGKFPCVLGHEGSGIVESVGEGVTSVAPG  181 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~-~~~~~p~~lG~E~~G~V~~vG~~v~~~~vG  181 (261)
                      ||++++.+++++|++++++.|.|++|||+|||+++|||++|++...+.. ....+|.++|||++|+|+++|++++++++|
T Consensus         1 MkA~v~~~~g~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~vG   80 (171)
T d1rjwa1           1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG   80 (171)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEecCCCCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCceee
Confidence            7999999999999999999999999999999999999999999887653 345678999999999999999999999999


Q ss_pred             CEEEEee-ccCCCCCcccccCccccccccccc-----cceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcc
Q psy7798         182 DHVIPLY-IPQCNECKFCKSSKTNLCTKIRTT-----QLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKR  255 (261)
Q Consensus       182 DrV~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~  255 (261)
                      |||+..+ ...|+.|..|..+..+.|......     |+++.+.++....++++|++++++.|+ +. ...++++++. .
T Consensus        81 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A~-l~-~~~~~~~~~~-~  157 (171)
T d1rjwa1          81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQP-LE-KINEVFDRML-K  157 (171)
T ss_dssp             CEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTCCEEEEE-GG-GHHHHHHHHH-T
T ss_pred             eEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHHEEECCCCCCHHHHH-HH-HHHHHHHHHH-h
Confidence            9997644 457899999999999998755332     455555566668889999999987654 43 4567777764 3


Q ss_pred             cCc
Q psy7798         256 RDF  258 (261)
Q Consensus       256 a~L  258 (261)
                      +.+
T Consensus       158 ~~~  160 (171)
T d1rjwa1         158 GQI  160 (171)
T ss_dssp             TCC
T ss_pred             cCC
Confidence            444

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.93  E-value=3.9e-27  Score=193.55  Aligned_cols=148  Identities=21%  Similarity=0.269  Sum_probs=124.3

Q ss_pred             eeEEEEecCCCCcEEEEeeCCCC-------CCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCC
Q psy7798         103 CKAAVAWEPKKPLSLETIQVAPP-------KAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGV  175 (261)
Q Consensus       103 ~~~~~~~~~g~~l~~~~~~~p~~-------~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v  175 (261)
                      +|++++.++++ +++++++.|.+       +++||+|||.++|||++|++++.|.++ ..+|.++|||++|+|+++|++|
T Consensus         2 ~kA~v~~~~~~-le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~-~~~P~v~GHE~~G~Vv~vG~~V   79 (201)
T d1kola1           2 NRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGRDV   79 (201)
T ss_dssp             EEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECTTC
T ss_pred             cEEEEEeCCCc-eEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcc-cccceeccceeeeeeecccccc
Confidence            68999999986 99999988754       579999999999999999999999887 4679999999999999999999


Q ss_pred             CCCCCCCEEEEeeccCCCCCcccccCccccccccc--------------cccceeeeeeeecc---cccccCCCCChhhh
Q psy7798         176 TSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIR--------------TTQLFLTSNVTISD---FNMGYSMTGSLERG  238 (261)
Q Consensus       176 ~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~g~~~~~~~~~~---~~~~~~~~~s~~ea  238 (261)
                      ++|++||||+..+..+|++|..|..+..+.|....              ...|.+++|+.++.   ..+++|++....++
T Consensus        80 ~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~~~~~~~  159 (201)
T d1kola1          80 ENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEK  159 (201)
T ss_dssp             CSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHHHHT
T ss_pred             ccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCCCChHHH
Confidence            99999999998888899999999999988875431              11244556666543   46789988888888


Q ss_pred             ccccchHHHHHHHH
Q psy7798         239 SKRDNSFQTTHFAV  252 (261)
Q Consensus       239 A~lp~~~~TA~~aL  252 (261)
                      +++...+.|+++++
T Consensus       160 ~~~~~~~~~~~~a~  173 (201)
T d1kola1         160 INIAEVVGVQVISL  173 (201)
T ss_dssp             CCHHHHHTEEEECG
T ss_pred             HHHHHHHHHHHHHH
Confidence            88887777777766

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=2.1e-24  Score=168.43  Aligned_cols=134  Identities=13%  Similarity=0.109  Sum_probs=110.6

Q ss_pred             eeEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCCCC
Q psy7798         103 CKAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTSVA  179 (261)
Q Consensus       103 ~~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~~  179 (261)
                      ||++++++++++  +++++++.|+|++|||+|||+|+|||++|++...|.++. ..+|.++|+|++|+|+++|.  +.++
T Consensus         1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~--~~~~   78 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSED--PRFH   78 (146)
T ss_dssp             CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECS--TTCC
T ss_pred             CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeecc--CCcc
Confidence            799999998876  778999999999999999999999999999999998764 45789999999999999876  4799


Q ss_pred             CCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhc
Q psy7798         180 PGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIK  254 (261)
Q Consensus       180 vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~  254 (261)
                      +||+|+......         +       ....|+++.+.....+.++++|+++||++||++|++++||+.++..
T Consensus        79 ~g~~v~~~~~~~---------g-------~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~~~~~  137 (146)
T d1o89a1          79 AGQEVLLTGWGV---------G-------ENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAIINNQ  137 (146)
T ss_dssp             TTCEEEEECTTB---------T-------TTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHHHTTC
T ss_pred             ceeeEEeecccc---------e-------ecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999998754211         0       1112666677777778999999999999999999999999887753

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.91  E-value=2.4e-24  Score=169.24  Aligned_cols=140  Identities=14%  Similarity=0.090  Sum_probs=116.1

Q ss_pred             eeeeEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCC
Q psy7798         101 IECKAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTS  177 (261)
Q Consensus       101 ~~~~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~  177 (261)
                      .+||++++.+++++  +++++++.|.|++|||+|||+|+|||++|++.+.|.++. ...|.++|+|++|+|++  .+++.
T Consensus         2 ~~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~~~   79 (152)
T d1xa0a1           2 SAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHPR   79 (152)
T ss_dssp             CEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCSSS
T ss_pred             CceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCCCc
Confidence            36899999998876  567899999999999999999999999999999987653 45789999999999998  56788


Q ss_pred             CCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhcccC
Q psy7798         178 VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIKRRD  257 (261)
Q Consensus       178 ~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~~a~  257 (261)
                      |++||+|+.......                ....|+|+++..++...++++|+++++ +||+++++.+|||+++..+++
T Consensus        80 ~~~g~~v~~~~~~~~----------------~~~~G~~aEy~~v~~~~~~~iP~~l~~-~aa~l~~a~~ta~~~~~~~~~  142 (152)
T d1xa0a1          80 FREGDEVIATGYEIG----------------VTHFGGYSEYARLHGEWLVPLPKGLER-IAQEISLAELPQALKRILRGE  142 (152)
T ss_dssp             CCTTCEEEEESTTBT----------------TTBCCSSBSEEEECGGGCEECCTTHHH-HEEEEEGGGHHHHHHHHHHTC
T ss_pred             cccCCEEEEecCccc----------------cccCCCcceeeeehhhccccCCCCCCH-HHHHHHHHHHHHHHHHHHhcC
Confidence            999999987642111                111256666666666889999999985 789999999999999999888


Q ss_pred             cc
Q psy7798         258 FE  259 (261)
Q Consensus       258 L~  259 (261)
                      ++
T Consensus       143 ~~  144 (152)
T d1xa0a1         143 LR  144 (152)
T ss_dssp             CC
T ss_pred             CC
Confidence            75

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.87  E-value=6.7e-23  Score=162.57  Aligned_cols=136  Identities=17%  Similarity=0.116  Sum_probs=112.5

Q ss_pred             eeeeEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC-CCCCcccccceEEEEEEeCCCCCC
Q psy7798         101 IECKAAVAWEPKKP--LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE-GKFPCVLGHEGSGIVESVGEGVTS  177 (261)
Q Consensus       101 ~~~~~~~~~~~g~~--l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~-~~~p~~lG~E~~G~V~~vG~~v~~  177 (261)
                      ..||++++.+.++.  |++++++.|+|++|||+|||+|+|||++|++.+.|.++. ...|.++|+|++|+|++  +.+++
T Consensus         2 ~~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~~   79 (162)
T d1tt7a1           2 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDPR   79 (162)
T ss_dssp             CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSSTT
T ss_pred             CcEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccccccc--ccccc
Confidence            36899999987744  999999999999999999999999999999999998764 35678999999999998  56789


Q ss_pred             CCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchHHHHHHHHhc
Q psy7798         178 VAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSFQTTHFAVIK  254 (261)
Q Consensus       178 ~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~~TA~~aL~~  254 (261)
                      +++||+|+......+                ....|+++++..+..+.+.++|+++++++||++|..++|||+++.+
T Consensus        80 ~~~g~~v~~~~~~~g----------------~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~~  140 (162)
T d1tt7a1          80 FAEGDEVIATSYELG----------------VSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSLE  140 (162)
T ss_dssp             CCTTCEEEEESTTBT----------------TTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEEECST
T ss_pred             cccceeeEeeeccce----------------eccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999999987653111                1112566666666668889999999999999999999999987643

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.80  E-value=4.1e-20  Score=147.54  Aligned_cols=137  Identities=19%  Similarity=0.166  Sum_probs=107.0

Q ss_pred             eeeeEEEEecCCCC---cEE--EEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCC----------CCCCcccccceE
Q psy7798         101 IECKAAVAWEPKKP---LSL--ETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSE----------GKFPCVLGHEGS  165 (261)
Q Consensus       101 ~~~~~~~~~~~g~~---l~~--~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~----------~~~p~~lG~E~~  165 (261)
                      .+||++++.++|+|   |++  .+++.|.|+++||+|||+++|||++|++++.|.++.          ...|.++|+|++
T Consensus         2 ~t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~   81 (175)
T d1gu7a1           2 ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGL   81 (175)
T ss_dssp             EEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCE
T ss_pred             ceeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccccc
Confidence            47899999999876   444  567778889999999999999999999999987543          235678899999


Q ss_pred             EEEEEeCCCCCCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCCCChhhhccccchH
Q psy7798         166 GIVESVGEGVTSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMTGSLERGSKRDNSF  245 (261)
Q Consensus       166 G~V~~vG~~v~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~s~~eaA~lp~~~  245 (261)
                      |+|+++|.+++.+++||||.......                     +++.++.+......+++|+++  .+++++++..
T Consensus        82 g~V~~~~~~~~~~~~g~~v~~~~~~~---------------------g~~aey~~v~~~~~~~iP~~~--~~~~a~~~~~  138 (175)
T d1gu7a1          82 FEVIKVGSNVSSLEAGDWVIPSHVNF---------------------GTWRTHALGNDDDFIKLPNPA--QSKANGKPNG  138 (175)
T ss_dssp             EEEEEECTTCCSCCTTCEEEESSSCC---------------------CCSBSEEEEEGGGEEEECCHH--HHHHTTCSCC
T ss_pred             cccccccccccccccccceecccccc---------------------ccccceeeehhhhccCCCccc--hhhhhccchH
Confidence            99999999999999999998644211                     334444455557788888865  4555567888


Q ss_pred             HHHHHHHhc-ccCccc
Q psy7798         246 QTTHFAVIK-RRDFEK  260 (261)
Q Consensus       246 ~TA~~aL~~-~a~L~~  260 (261)
                      +|||++|.+ .+++++
T Consensus       139 ~ta~~~l~~~~~~~~~  154 (175)
T d1gu7a1         139 LTDAKSIETLYDGTKP  154 (175)
T ss_dssp             CCCCCCEEEECCSSSC
T ss_pred             HHHHHHHHHHhcCCCC
Confidence            999999875 466664

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.43  E-value=1.9e-12  Score=99.70  Aligned_cols=126  Identities=13%  Similarity=0.058  Sum_probs=86.4

Q ss_pred             eeeEEEEecC--CCC----cEEEEeeCCCCCCCeEEEEEEEEEcChhhHHHHcCCCCCCCCCcccccceEEEEEEeCCCC
Q psy7798         102 ECKAAVAWEP--KKP----LSLETIQVAPPKAGEVRIKIVSTAICHTDAYTLDGLDSEGKFPCVLGHEGSGIVESVGEGV  175 (261)
Q Consensus       102 ~~~~~~~~~~--g~~----l~~~~~~~p~~~~~eVlVkV~a~gln~~Dv~~~~g~~~~~~~p~~lG~E~~G~V~~vG~~v  175 (261)
                      ..|++++.+.  |.|    +++++.+.|.|++|||+||+++.++++...... ..+   ....+++.+++|+|++  +++
T Consensus         3 ~~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~-~~~---~~g~~~~g~~vg~Vv~--S~~   76 (147)
T d1v3va1           3 KAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIAS-KRL---KEGAVMMGQQVARVVE--SKN   76 (147)
T ss_dssp             EEEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHG-GGS---CTTSBCCCCEEEEEEE--ESC
T ss_pred             ccEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEcccccccc-ccc---ccCCccccceEEEEEE--eCC
Confidence            4567777654  333    899999999999999999999999998644322 222   2234667789999987  778


Q ss_pred             CCCCCCCEEEEeeccCCCCCcccccCccccccccccccceeeeeeeecccccccCCC-----CChhhhccccchHHHH-H
Q psy7798         176 TSVAPGDHVIPLYIPQCNECKFCKSSKTNLCTKIRTTQLFLTSNVTISDFNMGYSMT-----GSLERGSKRDNSFQTT-H  249 (261)
Q Consensus       176 ~~~~vGDrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-----~s~~eaA~lp~~~~TA-~  249 (261)
                      ++|++||+|+++.                         |+.++.+.......+++++     .....++++.+..+|| |
T Consensus        77 ~~f~~GD~V~g~~-------------------------gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay  131 (147)
T d1v3va1          77 SAFPAGSIVLAQS-------------------------GWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAF  131 (147)
T ss_dssp             TTSCTTCEEEECC-------------------------CSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHH
T ss_pred             CcccCCCEEEEcc-------------------------CCEeEEEeccceeeEccccccccccchhhhHhccccchHHHH
Confidence            8999999998742                         2333333333444455432     3445567788888885 5


Q ss_pred             HHHhcccCc
Q psy7798         250 FAVIKRRDF  258 (261)
Q Consensus       250 ~aL~~~a~L  258 (261)
                      ..|++.+++
T Consensus       132 ~gl~~~~k~  140 (147)
T d1v3va1         132 IEMLNGANL  140 (147)
T ss_dssp             HHHHTTCCS
T ss_pred             HHhhCCCCC
Confidence            588877664

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=92.75  E-value=0.012  Score=38.68  Aligned_cols=22  Identities=9%  Similarity=-0.053  Sum_probs=19.8

Q ss_pred             CChhhhccccchHHHHHHHHhc
Q psy7798         233 GSLERGSKRDNSFQTTHFAVIK  254 (261)
Q Consensus       233 ~s~~eaA~lp~~~~TA~~aL~~  254 (261)
                      +|++||++++++++|||.+|+.
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~   22 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMA   22 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHhhhHHHHHHHHHHH
Confidence            5899999999999999988764

>d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.11  E-value=0.44  Score=32.15  Aligned_cols=26  Identities=42%  Similarity=0.447  Sum_probs=20.4

Q ss_pred             ceEEEEEEeCCCCC----------CCCCCCEEEEee
Q psy7798         163 EGSGIVESVGEGVT----------SVAPGDHVIPLY  188 (261)
Q Consensus       163 E~~G~V~~vG~~v~----------~~~vGDrV~~~~  188 (261)
                      ...|+|+++|++.-          .+++||+|+...
T Consensus        37 ~~~G~VvavG~g~~~~~~~~~~~~~vk~GD~Vl~~~   72 (99)
T d1p3ha_          37 PQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSK   72 (99)
T ss_dssp             EEEEEEEEECCCEECSSSSCEECCSCCTTCEEEEEC
T ss_pred             ceEEEEEEECCceEcCCCCEecCCeeecCCEEEEcc
Confidence            45799999998742          489999997643