Psyllid ID: psy782

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Protein Sequence
MSSQASKFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV
Secondary Structure (PSIPRED)
ccccccccccccccccccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHcHHHHHccccccHHHHHHHHHHccccEEcccccccccccHHHHHHHHHHHHHcccccHcccccccccHHHHHHHHHHHHHHcccEccccccc
Coil and Loop (DISEMBL)
mssqaskfalpprfeaSVYSVWVEFIQLSldhkplnlgqgfpdyesapshvskgladaatgENKLLNqytrgfghpRIVQAIAKLYSSLierpllphqlv
Flexible Loop (DISEMBL)
mssqaskfalpprfEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLierpllphqlv
Low Complexity Region (SEG)
MSSQASKFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV
Disordered region (IsUnstruct)
************RFEASVYSVWVEFIQLSLDHKPLNLGQGF********************ENKLLNQYTRGFGHPRIVQAIAKLYSSLIER********
Disordered Region (DISOPRED)
****************SVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV
Disordered Region (DISEMBL)
********ALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV
Disordered Region (DISPRO)
*****SKFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLL*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSQASKFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	100	2.2.26 [Sep-21-2011]
Q71RI9	455	Kynurenine--oxoglutarate	yes	N/A	0.94	0.206	0.453	5e-16
Q58FK9	454	Kynurenine--oxoglutarate	yes	N/A	0.94	0.207	0.432	2e-15
Q7T3E5	450	Kynurenine--oxoglutarate	no	N/A	0.83	0.184	0.465	1e-14
Q6YP21	454	Kynurenine--oxoglutarate	yes	N/A	0.85	0.187	0.443	6e-14
Q0P5G4	455	Kynurenine--oxoglutarate	yes	N/A	0.89	0.195	0.402	4e-13
Q8BTY1	424	Kynurenine--oxoglutarate	no	N/A	0.82	0.193	0.392	8e-11
Q08415	457	Kynurenine--oxoglutarate	no	N/A	0.82	0.179	0.369	1e-10
Q16773	422	Kynurenine--oxoglutarate	no	N/A	0.82	0.194	0.357	3e-10
Q54KM6	435	Kynurenine--oxoglutarate	yes	N/A	0.84	0.193	0.382	1e-08

>sp|Q71RI9|KAT3_MOUSE Kynurenine--oxoglutarate transaminase 3 OS=Mus musculus GN=Ccbl2 PE=1 SV=1

 Score = 82.8 bits (203), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 44/97 (45%), Positives = 63/97 (64%), Gaps = 3/97 (3%)

Query: 2   SSQASKFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATG 61
           +  A KF    R E    +VWVEF +L+ D   +NLGQGFPD  S PS+V + L+ AA  
Sbjct: 34  AKMALKFKNAKRIEGLDSNVWVEFTKLAADPSVVNLGQGFPDI-SPPSYVKEELSKAAFI 92

Query: 62  ENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQ 98
           +N  +NQYTRGFGHP +V+A++ LY  + +R + P++
Sbjct: 93  DN--MNQYTRGFGHPALVKALSCLYGKIYQRQIDPNE 127

Catalyzes the irreversible transamination of the L-tryptophan metabolite L-kynurenine to form kynurenic acid (KA). May catalyze the beta-elimination of S-conjugates and Se-conjugates of L-(seleno)cysteine, resulting in the cleavage of the C-S or C-Se bond (By similarity). Has transaminase activity towards L-kynurenine, tryptophan, phenylalanine, serine, cysteine, methionine, histidine, glutamine and asparagine with glyoxylate as an amino group acceptor (in vitro). Has lower activity with 2-oxoglutarate as amino group acceptor (in vitro).
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 6EC: 3

>sp|Q58FK9|KAT3_RAT Kynurenine--oxoglutarate transaminase 3 OS=Rattus norvegicus GN=Ccbl2 PE=2 SV=1

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 63/97 (64%), Gaps = 3/97 (3%)

Query: 2   SSQASKFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATG 61
           +  A +F    R E    +VWVEF +L+ D   +NLGQGFPD  + PS+V + L+ AA  
Sbjct: 33  AKMALRFKNAKRIEGLDQNVWVEFTKLAADPSVVNLGQGFPDI-TLPSYVQEELSKAAFI 91

Query: 62  ENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQ 98
           +N  LNQYTRGFGHP +V+A++ LY  + ++ + P++
Sbjct: 92  DN--LNQYTRGFGHPSLVKALSCLYGKIYQKQIDPNE 126

Catalyzes the irreversible transamination of the L-tryptophan metabolite L-kynurenine to form kynurenic acid (KA). May catalyze the beta-elimination of S-conjugates and Se-conjugates of L-(seleno)cysteine, resulting in the cleavage of the C-S or C-Se bond (By similarity). Has transaminase activity towards L-kynurenine, tryptophan, phenylalanine, serine, cysteine, methionine, histidine, glutamine and asparagine with glyoxylate as an amino group acceptor (in vitro). Has lower activity with 2-oxoglutarate as amino group acceptor (in vitro).

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 6

EC: 3

>sp|Q7T3E5|KAT3_DANRE Kynurenine--oxoglutarate transaminase 3 OS=Danio rerio GN=ccbl2 PE=2 SV=2

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 3/86 (3%)

Query: 13  RFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRG 72
           R E    +VWV F  ++ D   +NLGQG+PD    PS+V +GLA AA  +   LNQYTRG
Sbjct: 42  RIEGLDKNVWVAFTSVAADPSIVNLGQGYPDI-PPPSYVKEGLAQAAMVDR--LNQYTRG 98

Query: 73  FGHPRIVQAIAKLYSSLIERPLLPHQ 98
           FGHP +V+A++K+Y  + +R L P +
Sbjct: 99  FGHPTLVKALSKVYGKVYDRQLDPFK 124

Catalyzes the irreversible transamination of the L-tryptophan metabolite L-kynurenine to form kynurenic acid (KA). May catalyze the beta-elimination of S-conjugates and Se-conjugates of L-(seleno)cysteine, resulting in the cleavage of the C-S or C-Se bond (By similarity). Has transaminase activity towards L-kynurenine, tryptophan, phenylalanine, serine, cysteine, methionine, histidine, glutamine and asparagine with glyoxylate as an amino group acceptor (in vitro). Has lower activity with 2-oxoglutarate as amino group acceptor (in vitro).

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 6

EC: 3

>sp|Q6YP21|KAT3_HUMAN Kynurenine--oxoglutarate transaminase 3 OS=Homo sapiens GN=CCBL2 PE=1 SV=1

 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 3/88 (3%)

Query: 7   KFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLL 66
           KF    R E    +VW+EF +L+ D   +NLGQGFPD  S P++V + L+  A  ++  L
Sbjct: 38  KFTNAKRIEGLDSNVWIEFTKLAADPSVVNLGQGFPDI-SPPTYVKEELSKIAAIDS--L 94

Query: 67  NQYTRGFGHPRIVQAIAKLYSSLIERPL 94
           NQYTRGFGHP +V+A++ LY  L ++ +
Sbjct: 95  NQYTRGFGHPSLVKALSYLYEKLYQKQI 122

Catalyzes the irreversible transamination of the L-tryptophan metabolite L-kynurenine to form kynurenic acid (KA). May catalyze the beta-elimination of S-conjugates and Se-conjugates of L-(seleno)cysteine, resulting in the cleavage of the C-S or C-Se bond (By similarity). Has transaminase activity towards L-kynurenine, tryptophan, phenylalanine, serine, cysteine, methionine, histidine, glutamine and asparagine with glyoxylate as an amino group acceptor (in vitro). Has lower activity with 2-oxoglutarate as amino group acceptor (in vitro).

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 6

EC: 3

>sp|Q0P5G4|KAT3_BOVIN Kynurenine--oxoglutarate transaminase 3 OS=Bos taurus GN=CCBL2 PE=2 SV=1

 Score = 73.6 bits (179), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 3/92 (3%)

Query: 7   KFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLL 66
           +F    R E    ++W+EF +L+ D   +NLGQG PD  S P +V + L+  A  +N  L
Sbjct: 38  RFKNAKRIEGLDSNIWIEFTKLAADPSVVNLGQGLPDI-SPPVYVKEELSKIAAIDN--L 94

Query: 67  NQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQ 98
           NQYTRGFGHP +V+A++ LY       + P++
Sbjct: 95  NQYTRGFGHPSLVKALSCLYEKFYHNKINPNE 126

Catalyzes the irreversible transamination of the L-tryptophan metabolite L-kynurenine to form kynurenic acid (KA). May catalyze the beta-elimination of S-conjugates and Se-conjugates of L-(seleno)cysteine, resulting in the cleavage of the C-S or C-Se bond (By similarity). Has transaminase activity towards L-kynurenine, tryptophan, phenylalanine, serine, cysteine, methionine, histidine, glutamine and asparagine with glyoxylate as an amino group acceptor (in vitro). Has lower activity with 2-oxoglutarate as amino group acceptor (in vitro).

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 6

EC: 3

>sp|Q8BTY1|KAT1_MOUSE Kynurenine--oxoglutarate transaminase 1 OS=Mus musculus GN=Ccbl1 PE=2 SV=1

 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 2/84 (2%)

Query: 13 RFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRG 72
          R E   ++ WVEF +LS ++  +NLGQGFPD+ S P    +    A TG N +LNQYT  
Sbjct: 9  RLEGIDHNPWVEFTRLSKEYDVVNLGQGFPDF-SPPDFAVQAFQQATTG-NFMLNQYTSA 66

Query: 73 FGHPRIVQAIAKLYSSLIERPLLP 96
          FG+P + + +A  +  L+ + + P
Sbjct: 67 FGYPPLTKILASFFGKLLGQEMDP 90

Catalyzes the irreversible transamination of the L-tryptophan metabolite L-kynurenine to form kynurenic acid (KA). Metabolizes the cysteine conjugates of certain halogenated alkenes and alkanes to form reactive metabolites. Catalyzes the beta-elimination of S-conjugates and Se-conjugates of L-(seleno)cysteine, resulting in the cleavage of the C-S or C-Se bond.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 6

EC: 4

>sp|Q08415|KAT1_RAT Kynurenine--oxoglutarate transaminase 1, mitochondrial OS=Rattus norvegicus GN=Ccbl1 PE=1 SV=1

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 2/84 (2%)

Query: 13  RFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRG 72
           R +    ++WVEF +L+ ++  +NLGQGFPD+ S P   ++    A +G N +LNQYTR 
Sbjct: 43  RLDGIDQNLWVEFGKLTKEYDVVNLGQGFPDF-SPPDFATQAFQQATSG-NFMLNQYTRA 100

Query: 73  FGHPRIVQAIAKLYSSLIERPLLP 96
           FG+P +   +A  +  L+ + + P
Sbjct: 101 FGYPPLTNVLASFFGKLLGQEMDP 124

Catalyzes the irreversible transamination of the L-tryptophan metabolite L-kynurenine to form kynurenic acid (KA). Metabolizes the cysteine conjugates of certain halogenated alkenes and alkanes to form reactive metabolites. Catalyzes the beta-elimination of S-conjugates and Se-conjugates of L-(seleno)cysteine, resulting in the cleavage of the C-S or C-Se bond.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 6

EC: 4

>sp|Q16773|KAT1_HUMAN Kynurenine--oxoglutarate transaminase 1 OS=Homo sapiens GN=CCBL1 PE=1 SV=1

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 2/84 (2%)

Query: 13 RFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRG 72
          R +   Y+ WVEF++L+ +H  +NLGQGFPD+   P    +    A +G+  +LNQYT+ 
Sbjct: 9  RLDGIDYNPWVEFVKLASEHDVVNLGQGFPDF-PPPDFAVEAFQHAVSGDF-MLNQYTKT 66

Query: 73 FGHPRIVQAIAKLYSSLIERPLLP 96
          FG+P + + +A  +  L+ + + P
Sbjct: 67 FGYPPLTKILASFFGELLGQEIDP 90

Catalyzes the irreversible transamination of the L-tryptophan metabolite L-kynurenine to form kynurenic acid (KA). Metabolizes the cysteine conjugates of certain halogenated alkenes and alkanes to form reactive metabolites. Catalyzes the beta-elimination of S-conjugates and Se-conjugates of L-(seleno)cysteine, resulting in the cleavage of the C-S or C-Se bond.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 6

EC: 4

>sp|Q54KM6|KAT_DICDI Kynurenine--oxoglutarate transaminase OS=Dictyostelium discoideum GN=ccbl PE=3 SV=1

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 5/89 (5%)

Query: 8  FALPPRFEASVY--SVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKL 65
          +   P  + S +  SVW+EF  L++ +  +NLGQGFP++E  P  V   +    T E   
Sbjct: 12 YTFKPSKQTSSFGPSVWLEFSPLAIKYNAVNLGQGFPNFE-PPKFVKDAMIK--TIEVGG 68

Query: 66 LNQYTRGFGHPRIVQAIAKLYSSLIERPL 94
           NQYTR  GH R+V+A++ +YS    R L
Sbjct: 69 FNQYTRSPGHIRLVKALSSVYSPYFGREL 97

Catalyzes the irreversible transamination of the L-tryptophan metabolite L-kynurenine to form kynurenic acid (KA). Metabolizes the cysteine conjugates of certain halogenated alkenes and alkanes to form reactive metabolites. Catalyzes the beta-elimination of S-conjugates and Se-conjugates of L-(seleno)cysteine, resulting in the cleavage of the C-S or C-Se bond.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 6

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	100
91091720	429	PREDICTED: similar to kynurenine aminotr	0.95	0.221	0.663	1e-30
270000863	393	hypothetical protein TcasGA2_TC011119 [T	0.95	0.241	0.663	2e-30
242009619	467	kynurenine/oxoglutarate transaminase 1,	0.99	0.211	0.623	4e-28
383857126	460	PREDICTED: kynurenine--oxoglutarate tran	0.94	0.204	0.642	1e-27
328789112	121	PREDICTED: kynurenine--oxoglutarate tran	0.9	0.743	0.652	1e-26
389609455	422	kynurenine aminotransferase [Papilio xut	0.89	0.210	0.670	3e-26
307178243	461	Kynurenine--oxoglutarate transaminase 3	0.94	0.203	0.642	5e-26
350401520	449	PREDICTED: kynurenine--oxoglutarate tran	0.94	0.209	0.610	6e-26
332021464	410	Kynurenine--oxoglutarate transaminase 3	0.94	0.229	0.621	1e-25
380013738	449	PREDICTED: kynurenine--oxoglutarate tran	0.91	0.202	0.634	2e-25

>gi|91091720|ref|XP_966874.1| PREDICTED: similar to kynurenine aminotransferase [Tribolium castaneum]

 Score =  137 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 63/95 (66%), Positives = 76/95 (80%)

Query: 6   SKFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKL 65
           +KF LP R+  S  SVWVE+IQL++D+KPLNLGQGFPDY+SAPSHV++ LA+ A   N L
Sbjct: 7   NKFKLPGRYAGSEKSVWVEYIQLAMDYKPLNLGQGFPDYQSAPSHVTEALANVAKSPNCL 66

Query: 66  LNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV 100
           L+QYTRGFGHPR+V AIAKLYS LI R + PH  V
Sbjct: 67  LHQYTRGFGHPRLVSAIAKLYSHLIGREINPHSEV 101

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270000863|gb|EEZ97310.1| hypothetical protein TcasGA2_TC011119 [Tribolium castaneum]

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 63/95 (66%), Positives = 76/95 (80%)

Query: 6   SKFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKL 65
           +KF LP R+  S  SVWVE+IQL++D+KPLNLGQGFPDY+SAPSHV++ LA+ A   N L
Sbjct: 7   NKFKLPGRYAGSEKSVWVEYIQLAMDYKPLNLGQGFPDYQSAPSHVTEALANVAKSPNCL 66

Query: 66  LNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV 100
           L+QYTRGFGHPR+V AIAKLYS LI R + PH  V
Sbjct: 67  LHQYTRGFGHPRLVSAIAKLYSHLIGREINPHSEV 101

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242009619|ref|XP_002425580.1| kynurenine/oxoglutarate transaminase 1, putative [Pediculus humanus corporis] gi|212509473|gb|EEB12842.1| kynurenine/oxoglutarate transaminase 1, putative [Pediculus humanus corporis]

 Score =  128 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 63/101 (62%), Positives = 78/101 (77%), Gaps = 2/101 (1%)

Query: 1   MSS-QASKFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAA 59
           MSS  ++KF LP RF  S  SVWVE+IQL+ +HKPLNLGQGFPD+ +AP +V+K LA+A 
Sbjct: 43  MSSLNSNKFNLPDRFLGSEKSVWVEYIQLAAEHKPLNLGQGFPDF-AAPEYVTKALAEAT 101

Query: 60  TGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV 100
           TG N L+NQYTRGFGHPR+  AIAKLYS L+ R + P + V
Sbjct: 102 TGSNVLINQYTRGFGHPRLATAIAKLYSKLLGREINPFKEV 142

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383857126|ref|XP_003704057.1| PREDICTED: kynurenine--oxoglutarate transaminase 3-like [Megachile rotundata]

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 61/95 (64%), Positives = 72/95 (75%), Gaps = 1/95 (1%)

Query: 6   SKFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKL 65
           SKF LP R + +  SVWVE+IQL+L +KPLNLGQGFPD+  AP +V+K LADA T +N L
Sbjct: 42  SKFELPDRLKGNEKSVWVEYIQLALKYKPLNLGQGFPDFH-APENVTKALADATTSDNPL 100

Query: 66  LNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV 100
           LNQYTRGFGHPR+V  IAKLYS L+ R L P   V
Sbjct: 101 LNQYTRGFGHPRLVNVIAKLYSKLLNRTLDPQNEV 135

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328789112|ref|XP_003251231.1| PREDICTED: kynurenine--oxoglutarate transaminase 1, mitochondrial-like isoform 1 [Apis mellifera] gi|328789114|ref|XP_003251232.1| PREDICTED: kynurenine--oxoglutarate transaminase 1, mitochondrial-like isoform 2 [Apis mellifera]

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/92 (65%), Positives = 72/92 (78%), Gaps = 2/92 (2%)

Query: 6   SKFALPPRFEASVYSVWVEFIQLSLDHKPL-NLGQGFPDYESAPSHVSKGLADAATGENK 64
           SKF LP R + +  SVWVE+IQL+L +KPL NLGQGFPD+  AP +V+K LAD+AT EN 
Sbjct: 30  SKFDLPDRLKGNEKSVWVEYIQLALKYKPLVNLGQGFPDFH-APENVTKALADSATSENP 88

Query: 65  LLNQYTRGFGHPRIVQAIAKLYSSLIERPLLP 96
           LLNQYTRGFGHPR+V  +AKLYS L+ R L P
Sbjct: 89  LLNQYTRGFGHPRLVNVVAKLYSKLLNRTLDP 120

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|389609455|dbj|BAM18339.1| kynurenine aminotransferase [Papilio xuthus]

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 61/91 (67%), Positives = 70/91 (76%), Gaps = 2/91 (2%)

Query: 7  KFALPPRFEASVYSVWVEFIQLSLDHKP-LNLGQGFPDYESAPSHVSKGLADAATGENKL 65
          KF LP R+ A   SVWVE+IQL+ D+KP +NLGQGFPDY  AP HV+K LAD AT +N L
Sbjct: 4  KFRLPARYGAGEKSVWVEYIQLAADYKPAVNLGQGFPDYH-APKHVTKALADIATSDNPL 62

Query: 66 LNQYTRGFGHPRIVQAIAKLYSSLIERPLLP 96
          L QYTRGFGHPR+VQ IAK+YS LI R L P
Sbjct: 63 LMQYTRGFGHPRLVQNIAKVYSPLIGRELDP 93

Source: Papilio xuthus

Species: Papilio xuthus

Genus: Papilio

Family: Papilionidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307178243|gb|EFN67028.1| Kynurenine--oxoglutarate transaminase 3 [Camponotus floridanus]

 Score =  121 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 61/95 (64%), Positives = 70/95 (73%), Gaps = 1/95 (1%)

Query: 6   SKFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKL 65
           SKF LP R + S  SVWVE+IQL+L +KPLNLGQGFPDY  AP +V+  LA  A  EN L
Sbjct: 41  SKFDLPNRLKGSEKSVWVEYIQLALQYKPLNLGQGFPDY-YAPENVTNALAAIAKSENPL 99

Query: 66  LNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV 100
           L QYTRGFGHPR+V AIAK YS LI R L P++ V
Sbjct: 100 LQQYTRGFGHPRLVNAIAKFYSKLINRDLDPNKEV 134

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350401520|ref|XP_003486180.1| PREDICTED: kynurenine--oxoglutarate transaminase 3-like [Bombus impatiens]

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 58/95 (61%), Positives = 72/95 (75%), Gaps = 1/95 (1%)

Query: 6   SKFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKL 65
           SKF LP RF+ +  S+WVE+IQL   +KPLNLGQGFPD+  AP +++K LA A   +N L
Sbjct: 31  SKFDLPDRFKGNDKSIWVEYIQLDSKYKPLNLGQGFPDF-YAPENITKALAAATASDNPL 89

Query: 66  LNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV 100
           LNQYTRGFGHPR+V AIAKLYS L+ R L P++ V
Sbjct: 90  LNQYTRGFGHPRLVNAIAKLYSKLLNRTLDPNKEV 124

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332021464|gb|EGI61832.1| Kynurenine--oxoglutarate transaminase 3 [Acromyrmex echinatior]

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 59/95 (62%), Positives = 70/95 (73%), Gaps = 1/95 (1%)

Query: 6   SKFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKL 65
           SKF LP R + +  SVWVE+IQL+L +KPLNLGQGFPDY  AP +V+  LA  A  +N L
Sbjct: 26  SKFDLPNRLKGNEKSVWVEYIQLALQYKPLNLGQGFPDY-YAPENVTNALATVAKSDNPL 84

Query: 66  LNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV 100
           L QYTRGFGHPR+V AIAK YS LI R L P++ V
Sbjct: 85  LQQYTRGFGHPRLVNAIAKFYSKLINRDLDPNKEV 119

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380013738|ref|XP_003690906.1| PREDICTED: kynurenine--oxoglutarate transaminase 3-like [Apis florea]

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 59/93 (63%), Positives = 71/93 (76%), Gaps = 2/93 (2%)

Query: 6   SKFALPPRFEASVYSVWVEFIQLSLDHKPL-NLGQGFPDYESAPSHVSKGLADAATGENK 64
           SKF LP R + +  SVWVE+IQL+L +KPL NLGQGFPD+  AP +V+K L  AAT EN 
Sbjct: 30  SKFDLPDRLKGTEKSVWVEYIQLALKYKPLVNLGQGFPDFH-APENVTKALVAAATSENP 88

Query: 65  LLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPH 97
           LLNQYTRGFGHPR+V  +AKLYS L+ R L P+
Sbjct: 89  LLNQYTRGFGHPRLVNVVAKLYSKLLNRTLDPN 121

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	100
FB|FBgn0037955	450	CG6950 [Drosophila melanogaste	0.89	0.197	0.555	4.7e-22
MGI|MGI:2677849	455	Ccbl2 "cysteine conjugate-beta	0.94	0.206	0.453	5.7e-16
ZFIN|ZDB-GENE-040426-2676	446	ccbl1 "cysteine conjugate-beta	0.82	0.183	0.452	1.9e-15
RGD|1359262	454	Kat3 "kynurenine aminotransfer	0.94	0.207	0.432	2.6e-15
ZFIN|ZDB-GENE-040426-1299	450	ccbl2 "cysteine conjugate-beta	0.81	0.18	0.476	1.9e-14
UNIPROTKB|Q6YP21	454	CCBL2 "Kynurenine--oxoglutarat	0.85	0.187	0.443	5.3e-14
UNIPROTKB|E1BXL5	456	LOC100859686 "Uncharacterized	0.83	0.182	0.411	1.4e-13
UNIPROTKB|E2RPG4	455	CCBL2 "Uncharacterized protein	0.83	0.182	0.430	3.9e-13
UNIPROTKB|E1C934	419	CCBL2 "Uncharacterized protein	0.81	0.193	0.452	6.9e-13
UNIPROTKB|F1S4D5	430	CCBL2 "Uncharacterized protein	0.89	0.206	0.423	7.4e-13

FB|FBgn0037955 CG6950 [Drosophila melanogaster (taxid:7227)]

 Score = 261 (96.9 bits), Expect = 4.7e-22, P = 4.7e-22
 Identities = 50/90 (55%), Positives = 67/90 (74%)

Query:     7 KFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLL 66
             KF LP R + S  SVW E+I L++ +KPLNLGQGFPD ++AP +V+  LAD A  +N LL
Sbjct:    36 KFDLPKRLQGSTPSVWNEYIALAMQYKPLNLGQGFPD-DAAPEYVTHSLADIAKEQNPLL 94

Query:    67 NQYTRGFGHPRIVQAIAKLYSSLIERPLLP 96
             +QYTRG+GH R+V A++KLYS L+ + L P
Sbjct:    95 HQYTRGYGHVRLVNALSKLYSGLVGKELNP 124

GO:0016212 "kynurenine-oxoglutarate transaminase activity" evidence=ISS

GO:0009058 "biosynthetic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

MGI|MGI:2677849 Ccbl2 "cysteine conjugate-beta lyase 2" [Mus musculus (taxid:10090)]

 Score = 206 (77.6 bits), Expect = 5.7e-16, P = 5.7e-16
 Identities = 44/97 (45%), Positives = 63/97 (64%)

Query:     2 SSQASKFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATG 61
             +  A KF    R E    +VWVEF +L+ D   +NLGQGFPD  S PS+V + L+ AA  
Sbjct:    34 AKMALKFKNAKRIEGLDSNVWVEFTKLAADPSVVNLGQGFPDI-SPPSYVKEELSKAAFI 92

Query:    62 ENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQ 98
             +N  +NQYTRGFGHP +V+A++ LY  + +R + P++
Sbjct:    93 DN--MNQYTRGFGHPALVKALSCLYGKIYQRQIDPNE 127

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0006103 "2-oxoglutarate metabolic process" evidence=IDA

GO:0006520 "cellular amino acid metabolic process" evidence=IDA

GO:0008483 "transaminase activity" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016212 "kynurenine-oxoglutarate transaminase activity" evidence=IDA

GO:0016740 "transferase activity" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0047315 "kynurenine-glyoxylate transaminase activity" evidence=IDA

GO:0047804 "cysteine-S-conjugate beta-lyase activity" evidence=IEA

GO:0070189 "kynurenine metabolic process" evidence=IDA

ZFIN|ZDB-GENE-040426-2676 ccbl1 "cysteine conjugate-beta lyase; cytoplasmic (glutamine transaminase K, kyneurenine aminotransferase)" [Danio rerio (taxid:7955)]

 Score = 201 (75.8 bits), Expect = 1.9e-15, P = 1.9e-15
 Identities = 38/84 (45%), Positives = 57/84 (67%)

Query:    13 RFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRG 72
             R E    ++WVEF QL+ D+K +NLGQGFPD+ S PS + +   +A TG  ++ +QYTR 
Sbjct:    35 RLEGIDKNIWVEFTQLAADYKAVNLGQGFPDF-SPPSFIQEAFCNALTGGFRM-HQYTRA 92

Query:    73 FGHPRIVQAIAKLYSSLIERPLLP 96
             FGHP +V+ +AK +S ++ R + P
Sbjct:    93 FGHPNLVKILAKFFSRIVGREIDP 116

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

RGD|1359262 Kat3 "kynurenine aminotransferase III" [Rattus norvegicus (taxid:10116)]

 Score = 200 (75.5 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 42/97 (43%), Positives = 63/97 (64%)

Query:     2 SSQASKFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATG 61
             +  A +F    R E    +VWVEF +L+ D   +NLGQGFPD  + PS+V + L+ AA  
Sbjct:    33 AKMALRFKNAKRIEGLDQNVWVEFTKLAADPSVVNLGQGFPDI-TLPSYVQEELSKAAFI 91

Query:    62 ENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQ 98
             +N  LNQYTRGFGHP +V+A++ LY  + ++ + P++
Sbjct:    92 DN--LNQYTRGFGHPSLVKALSCLYGKIYQKQIDPNE 126

GO:0003824 "catalytic activity" evidence=IEA

GO:0006520 "cellular amino acid metabolic process" evidence=ISS

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016212 "kynurenine-oxoglutarate transaminase activity" evidence=ISS

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0047315 "kynurenine-glyoxylate transaminase activity" evidence=ISS

GO:0047804 "cysteine-S-conjugate beta-lyase activity" evidence=IEA

GO:0070189 "kynurenine metabolic process" evidence=ISS

ZFIN|ZDB-GENE-040426-1299 ccbl2 "cysteine conjugate-beta lyase 2" [Danio rerio (taxid:7955)]

 Score = 192 (72.6 bits), Expect = 1.9e-14, P = 1.9e-14
 Identities = 40/84 (47%), Positives = 55/84 (65%)

Query:    13 RFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRG 72
             R E    +VWV F  ++ D   +NLGQG+PD    PS+V +GLA AA  +   LNQYTRG
Sbjct:    42 RIEGLDKNVWVAFTSVAADPSIVNLGQGYPDIPP-PSYVKEGLAQAAMVDR--LNQYTRG 98

Query:    73 FGHPRIVQAIAKLYSSLIERPLLP 96
             FGHP +V+A++K+Y  + +R L P
Sbjct:    99 FGHPTLVKALSKVYGKVYDRQLDP 122

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0047315 "kynurenine-glyoxylate transaminase activity" evidence=IEA;ISS

GO:0016212 "kynurenine-oxoglutarate transaminase activity" evidence=ISS

GO:0097052 "L-kynurenine metabolic process" evidence=ISS

GO:0008483 "transaminase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

UNIPROTKB|Q6YP21 CCBL2 "Kynurenine--oxoglutarate transaminase 3" [Homo sapiens (taxid:9606)]

 Score = 188 (71.2 bits), Expect = 5.3e-14, P = 5.3e-14
 Identities = 39/88 (44%), Positives = 57/88 (64%)

Query:     7 KFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLL 66
             KF    R E    +VW+EF +L+ D   +NLGQGFPD  S P++V + L+  A  ++  L
Sbjct:    38 KFTNAKRIEGLDSNVWIEFTKLAADPSVVNLGQGFPDI-SPPTYVKEELSKIAAIDS--L 94

Query:    67 NQYTRGFGHPRIVQAIAKLYSSLIERPL 94
             NQYTRGFGHP +V+A++ LY  L ++ +
Sbjct:    95 NQYTRGFGHPSLVKALSYLYEKLYQKQI 122

GO:0009058 "biosynthetic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0047804 "cysteine-S-conjugate beta-lyase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006103 "2-oxoglutarate metabolic process" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0070189 "kynurenine metabolic process" evidence=ISS

GO:0047315 "kynurenine-glyoxylate transaminase activity" evidence=ISS

GO:0016212 "kynurenine-oxoglutarate transaminase activity" evidence=ISS

GO:0006520 "cellular amino acid metabolic process" evidence=ISS

GO:0006569 "tryptophan catabolic process" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

UNIPROTKB|E1BXL5 LOC100859686 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 184 (69.8 bits), Expect = 1.4e-13, P = 1.4e-13
 Identities = 35/85 (41%), Positives = 56/85 (65%)

Query:    13 RFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENK-LLNQYTR 71
             R E    ++WVEF++L+  +  +NLGQGFPD+   P  + +  + A +GE + +L+QYTR
Sbjct:    39 RLEGVDKNIWVEFVKLAATYSTVNLGQGFPDFPP-PEFLKEAFSRAVSGEEEHMLHQYTR 97

Query:    72 GFGHPRIVQAIAKLYSSLIERPLLP 96
              FGHP +V+ +A+L+  L+ R L P
Sbjct:    98 AFGHPPLVKILAQLFGKLLGRDLDP 122

GO:0009058 "biosynthetic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0016212 "kynurenine-oxoglutarate transaminase activity" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0047312 "L-phenylalanine:pyruvate aminotransferase activity" evidence=IEA

GO:0047945 "L-glutamine:pyruvate aminotransferase activity" evidence=IEA

UNIPROTKB|E2RPG4 CCBL2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 180 (68.4 bits), Expect = 3.9e-13, P = 3.9e-13
 Identities = 37/86 (43%), Positives = 55/86 (63%)

Query:    13 RFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRG 72
             R E    +VW+EF +L+ D   +NLGQG PD  S P +V + L+  A  ++  LNQYTRG
Sbjct:    44 RIEGLDSNVWIEFTKLAADPSVVNLGQGLPDI-SPPIYVKEELSKIAAIDS--LNQYTRG 100

Query:    73 FGHPRIVQAIAKLYSSLIERPLLPHQ 98
             FGHP +V+A++ LY    + P+ P++
Sbjct:   101 FGHPSLVKALSCLYEKFYQNPINPNK 126

GO:0047315 "kynurenine-glyoxylate transaminase activity" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0016212 "kynurenine-oxoglutarate transaminase activity" evidence=IEA

GO:0006103 "2-oxoglutarate metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

UNIPROTKB|E1C934 CCBL2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 177 (67.4 bits), Expect = 6.9e-13, P = 6.9e-13
 Identities = 38/84 (45%), Positives = 54/84 (64%)

Query:    13 RFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRG 72
             R E    +VWVEF +++ D   +NLGQG PD    PS+V + LA AA  +   LNQYTRG
Sbjct:    10 RIEGLDSNVWVEFTKVAADPSIVNLGQGLPDI-CPPSYVKEELAKAAAVDR--LNQYTRG 66

Query:    73 FGHPRIVQAIAKLYSSLIERPLLP 96
             FGHP +V+A++++Y  +  R + P
Sbjct:    67 FGHPSLVKALSQVYERVCGRKIDP 90

GO:0009058 "biosynthetic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006103 "2-oxoglutarate metabolic process" evidence=IEA

GO:0016212 "kynurenine-oxoglutarate transaminase activity" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0047315 "kynurenine-glyoxylate transaminase activity" evidence=IEA

UNIPROTKB|F1S4D5 CCBL2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 177 (67.4 bits), Expect = 7.4e-13, P = 7.4e-13
 Identities = 39/92 (42%), Positives = 56/92 (60%)

Query:     5 ASKFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENK 64
             +SKF    R E    +VWVEF QL+ D   +NLGQG PD  S P +V + L+  A  ++ 
Sbjct:    11 SSKFKNAKRIEGLDSNVWVEFTQLAADPTVVNLGQGLPDI-SPPEYVKEKLSKIAAVDS- 68

Query:    65 LLNQYTRGFGHPRIVQAIAKLYSSLIERPLLP 96
              +NQYTRGFGH  +V+A++ LY    ++ + P
Sbjct:    69 -MNQYTRGFGHLSLVKALSCLYGKFYQKQINP 99

GO:0047315 "kynurenine-glyoxylate transaminase activity" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0016212 "kynurenine-oxoglutarate transaminase activity" evidence=IEA

GO:0006103 "2-oxoglutarate metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	100
PLN00175	413	PLN00175, PLN00175, aminotransferase family protei	2e-07
PRK07777	387	PRK07777, PRK07777, aminotransferase; Validated	1e-05
PRK09082	386	PRK09082, PRK09082, methionine aminotransferase; V	3e-05
PRK08912	387	PRK08912, PRK08912, hypothetical protein; Provisio	9e-05
PRK08068	389	PRK08068, PRK08068, transaminase; Reviewed	3e-04
cd00609	350	cd00609, AAT_like, Aspartate aminotransferase fami	5e-04

>gnl|CDD|215089 PLN00175, PLN00175, aminotransferase family protein; Provisional

 Score = 47.2 bits (112), Expect = 2e-07
 Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 4/72 (5%)

Query: 13  RFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRG 72
           R E    +++ +   L++ H  +NLGQGFP+++  P  V K  A  A  + K  NQY RG
Sbjct: 35  RLEKFKTTIFTQMSSLAIKHGAINLGQGFPNFD-GPDFV-KEAAIQAIRDGK--NQYARG 90

Query: 73  FGHPRIVQAIAK 84
           FG P +  AIA+
Sbjct: 91  FGVPELNSAIAE 102

Length = 413

>gnl|CDD|236095 PRK07777, PRK07777, aminotransferase; Validated

 Score = 41.6 bits (98), Expect = 1e-05
 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%)

Query: 20 SVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIV 79
          +++ E   L++    +NLGQGFPD E  P  + +   +A  G     NQY  G G P + 
Sbjct: 12 TIFAEMSALAVRTGAVNLGQGFPD-EDGPPEMLEAAQEAIAGGV---NQYPPGPGIPELR 67

Query: 80 QAIA 83
           AIA
Sbjct: 68 AAIA 71

Length = 387

>gnl|CDD|181642 PRK09082, PRK09082, methionine aminotransferase; Validated

 Score = 40.3 bits (95), Expect = 3e-05
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 6/58 (10%)

Query: 27 QLSLDHKPLNLGQGFPDYESAPSHVSKGLADA-ATGENKLLNQYTRGFGHPRIVQAIA 83
           L+ +H  +NL QGFPD++  P ++ + LA A A G     NQY    G   + +AIA
Sbjct: 25 ALAAEHGAINLSQGFPDFD-GPPYLVEALAYAMAAG----HNQYPPMTGVAALREAIA 77

Length = 386

>gnl|CDD|181580 PRK08912, PRK08912, hypothetical protein; Provisional

 Score = 39.2 bits (92), Expect = 9e-05
 Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 6/61 (9%)

Query: 27 QLSLDHKPLNLGQGFPDYESAPSHVSKGLADA-ATGENKLLNQYTRGFGHPRIVQAIAKL 85
          QL+ +H  +NLGQGFPD    P  V +  ADA   G     NQY    G P + QA+A  
Sbjct: 21 QLAREHGAINLGQGFPDDP-GPEDVRRAAADALLDGS----NQYPPMMGLPELRQAVAAH 75

Query: 86 Y 86
          Y
Sbjct: 76 Y 76

Length = 387

>gnl|CDD|181219 PRK08068, PRK08068, transaminase; Reviewed

 Score = 37.6 bits (88), Expect = 3e-04
 Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 9/79 (11%)

Query: 10 LPPRFEASVYSVWVEFIQ--LSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLN 67
          LP +F AS+    V  +   ++  H  +NLGQG PD +  P H+ + L +AA  EN   +
Sbjct: 12 LPKQFFASL----VAKVNKKVAEGHDVINLGQGNPD-QPTPEHIVEALQEAA--ENPANH 64

Query: 68 QYTRGFGHPRIVQAIAKLY 86
          +Y+   G+P + +A A  Y
Sbjct: 65 KYSPFRGYPFLKEAAADFY 83

Length = 389

>gnl|CDD|99734 cd00609, AAT_like, Aspartate aminotransferase family

 Score = 36.9 bits (86), Expect = 5e-04
 Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 3/53 (5%)

Query: 35 LNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS 87
          ++L  G PD+   P  +    A AA      L  Y    G P + +AIA+   
Sbjct: 1  IDLSIGEPDFPPPPEVL---EALAAAALRAGLLGYYPDPGLPELREAIAEWLG 50

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein. Length = 350

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	100
KOG0257|consensus	420		99.56
PLN00175	413	aminotransferase family protein; Provisional	99.55
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	99.49
PRK08912	387	hypothetical protein; Provisional	99.36
PRK06107	402	aspartate aminotransferase; Provisional	99.33
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	99.33
PRK07366	388	succinyldiaminopimelate transaminase; Validated	99.32
PRK08960	387	hypothetical protein; Provisional	99.29
PLN02368	407	alanine transaminase	99.29
PRK07337	388	aminotransferase; Validated	99.27
PRK06108	382	aspartate aminotransferase; Provisional	99.26
PRK06348	384	aspartate aminotransferase; Provisional	99.25
PTZ00377	481	alanine aminotransferase; Provisional	99.25
PRK08068	389	transaminase; Reviewed	99.25
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	99.25
PRK12414	384	putative aminotransferase; Provisional	99.24
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	99.23
PRK05942	394	aspartate aminotransferase; Provisional	99.23
PRK05764	393	aspartate aminotransferase; Provisional	99.22
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	99.21
PRK07683	387	aminotransferase A; Validated	99.21
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	99.19
PRK08363	398	alanine aminotransferase; Validated	99.19
PRK09082	386	methionine aminotransferase; Validated	99.18
PRK07777	387	aminotransferase; Validated	99.17
PRK08361	391	aspartate aminotransferase; Provisional	99.16
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	99.16
PRK06855	433	aminotransferase; Validated	99.16
PTZ00433	412	tyrosine aminotransferase; Provisional	99.16
PRK07550	386	hypothetical protein; Provisional	99.16
PLN02656	409	tyrosine transaminase	99.15
PRK07309	391	aromatic amino acid aminotransferase; Validated	99.15
PRK09148	405	aminotransferase; Validated	99.15
PRK07681	399	aspartate aminotransferase; Provisional	99.15
PRK07682	378	hypothetical protein; Validated	99.14
PRK05957	389	aspartate aminotransferase; Provisional	99.13
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	99.13
PLN02187	462	rooty/superroot1	99.1
PRK08636	403	aspartate aminotransferase; Provisional	99.08
PRK09265	404	aminotransferase AlaT; Validated	99.07
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	99.06
PRK05839	374	hypothetical protein; Provisional	99.06
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	99.06
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	99.05
PRK09257	396	aromatic amino acid aminotransferase; Provisional	99.04
PLN02231	534	alanine transaminase	99.03
PTZ00376	404	aspartate aminotransferase; Provisional	99.01
PRK07568	397	aspartate aminotransferase; Provisional	98.98
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	98.94
PRK08175	395	aminotransferase; Validated	98.93
PRK06207	405	aspartate aminotransferase; Provisional	98.9
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	98.9
PRK06836	394	aspartate aminotransferase; Provisional	98.89
PRK06290	410	aspartate aminotransferase; Provisional	98.83
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	98.79
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	98.75
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	98.75
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	98.73
PLN02994	153	1-aminocyclopropane-1-carboxylate synthase	98.66
PLN02397	423	aspartate transaminase	98.65
KOG0259|consensus	447		98.63
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	98.61
PRK07324	373	transaminase; Validated	98.58
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	98.53
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	98.49
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	98.47
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	98.45
PRK09275	527	aspartate aminotransferase; Provisional	98.42
PRK07908	349	hypothetical protein; Provisional	98.29
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	98.23
PLN02672	1082	methionine S-methyltransferase	98.18
PRK06225	380	aspartate aminotransferase; Provisional	98.17
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	98.14
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	98.12
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	98.06
PRK01533	366	histidinol-phosphate aminotransferase; Validated	98.01
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	98.0
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	97.96
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	97.95
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	97.95
PRK07392	360	threonine-phosphate decarboxylase; Validated	97.93
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	97.93
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	97.88
PRK08056	356	threonine-phosphate decarboxylase; Provisional	97.77
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	97.72
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	97.71
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	97.7
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	97.7
PRK06358	354	threonine-phosphate decarboxylase; Provisional	97.69
PRK03321	352	putative aminotransferase; Provisional	97.66
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	97.64
PRK09105	370	putative aminotransferase; Provisional	97.56
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	97.54
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	97.46
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	97.36
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	97.35
PRK02731	367	histidinol-phosphate aminotransferase; Validated	97.33
PRK00950	361	histidinol-phosphate aminotransferase; Validated	97.24
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	97.24
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	97.23
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	97.2
PRK08637	388	hypothetical protein; Provisional	97.16
cd00609	350	AAT_like Aspartate aminotransferase family. This f	96.98
KOG0258|consensus	475		96.76
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	96.36
PLN02822	481	serine palmitoyltransferase	96.22
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	95.55
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	95.48
KOG0634|consensus	472		95.11
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	95.09
PRK04366	481	glycine dehydrogenase subunit 2; Validated	95.06
PRK00451	447	glycine dehydrogenase subunit 1; Validated	94.83
PLN02721	353	threonine aldolase	94.26
PRK08354	311	putative aminotransferase; Provisional	94.21
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	94.13
PLN02483	489	serine palmitoyltransferase	93.07
PLN02672	1082	methionine S-methyltransferase	92.73
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	91.76
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	91.34
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	91.25
PRK10534	333	L-threonine aldolase; Provisional	90.35
KOG0256|consensus	471		86.43
PRK02627	396	acetylornithine aminotransferase; Provisional	84.0
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	81.44

>KOG0257|consensus

Probab=99.56  E-value=1.8e-14  Score=101.85  Aligned_cols=91  Identities=40%  Similarity=0.607  Sum_probs=81.7

Q ss_pred             CCCCChhhcccchhHHHHHHHhhcCCCcee-cCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHH
Q psy782            7 KFALPPRFEASVYSVWVEFIQLSLDHKPLN-LGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKL   85 (100)
Q Consensus         7 ~~~~s~r~~~~~~~~~~~~~~~~~~~~~i~-l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~   85 (100)
                      .+..++++....+++|.++.+++.+..+.+ ||+|+|++ +||+.+.+++++++++.  ..+||++..|+|+||++|++.
T Consensus         5 ~~~~~~~l~~~~~~vw~e~~~la~e~~~~~~LgqGfp~~-~~P~fv~ea~~~~~~~~--~~~qYt~~~G~p~L~~aL~k~   81 (420)
T KOG0257|consen    5 KRLRNRNLSTSKPYVWTEINRLAAEHKVPNPLGQGFPDF-PPPKFVTEAAKNAAKEP--STNQYTRGYGLPQLRKALAKA   81 (420)
T ss_pred             cccccccccccCCcHHHHHHHHHHhcCCCCcccCCCCCC-CCcHHHHHHHHHHhccc--hhccccccCCchHHHHHHHHH
Confidence            345577888888899999999988877777 99999999 99999999999999886  589999999999999999999


Q ss_pred             HhhhhCCCCCCCCCC
Q psy782           86 YSSLIERPLLPHQLV  100 (100)
Q Consensus        86 ~~~~~g~~~~~~~eI  100 (100)
                      ++..||..+++++||
T Consensus        82 ~se~~~~~~~~~~eV   96 (420)
T KOG0257|consen   82 YSEFYGGLLDPDDEV   96 (420)
T ss_pred             HHHHhccccCCcccE
Confidence            999899999998776

>PLN00175 aminotransferase family protein; Provisional

Probab=99.55  E-value=3.6e-14  Score=101.48  Aligned_cols=89  Identities=30%  Similarity=0.557  Sum_probs=78.2

Q ss_pred             CCCChhhcccchhHHHHHHHhhcCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHh
Q psy782            8 FALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus         8 ~~~s~r~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   87 (100)
                      +.++.|+..+..+.+..+.+.+...++|+|++|.|++ .+|+.+.+++.+++++.   .++|++..|.++||++||+++.
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~-~~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~Lr~aia~~~~  105 (413)
T PLN00175         30 LQVAKRLEKFKTTIFTQMSSLAIKHGAINLGQGFPNF-DGPDFVKEAAIQAIRDG---KNQYARGFGVPELNSAIAERFK  105 (413)
T ss_pred             cchhHHhhcCCCCHHHHHHHHhhcCCeEecCCCCCCC-CCCHHHHHHHHHHHhcC---CCCcCCCCCCHHHHHHHHHHHH
Confidence            4578888888899998888887777999999999999 88899999999998764   6799999999999999999999


Q ss_pred             hhhCCCCCCCCCC
Q psy782           88 SLIERPLLPHQLV  100 (100)
Q Consensus        88 ~~~g~~~~~~~eI  100 (100)
                      +.+|++++++++|
T Consensus       106 ~~~g~~~~~~~~I  118 (413)
T PLN00175        106 KDTGLVVDPEKEV  118 (413)
T ss_pred             HHhCCCCCCCCCE
Confidence            8889988887444

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=99.49  E-value=1.5e-13  Score=98.11  Aligned_cols=65  Identities=25%  Similarity=0.418  Sum_probs=58.9

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      .++|+|++|+||+ ++|+++.+++.+++..+   ..+|++..|+++||++||+++.+++|+.+++++||
T Consensus        28 ~~vi~l~iG~Pd~-~~p~~i~~a~~~a~~~~---~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~ei   92 (393)
T COG0436          28 EDVIDLSIGEPDF-PTPEHIIEAAIEALEEG---GTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEI   92 (393)
T ss_pred             CCEEEeCCCCCCC-CCCHHHHHHHHHHHhcc---cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeE
Confidence            4699999999999 99999999999998876   22888999999999999999999999999998555

>PRK08912 hypothetical protein; Provisional

Probab=99.36  E-value=5.1e-12  Score=89.41  Aligned_cols=86  Identities=35%  Similarity=0.512  Sum_probs=71.2

Q ss_pred             ChhhcccchhHHHHHHHhhcCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhh
Q psy782           11 PPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLI   90 (100)
Q Consensus        11 s~r~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~   90 (100)
                      ++++..+..+.+..+.+.....++|+|+.|.|+. .+|..+.+++.+.+...   ..+|++..|.++||++||+++.+.+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~-~~p~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~   80 (387)
T PRK08912          5 NPVFADLPTTIFEVMSQLAREHGAINLGQGFPDD-PGPEDVRRAAADALLDG---SNQYPPMMGLPELRQAVAAHYARFQ   80 (387)
T ss_pred             hHHHhhCCCCHHHHHHHHHhhCCeEEccCCCCCC-CCCHHHHHHHHHHHhcC---CCCCCCCCCcHHHHHHHHHHHHHHh
Confidence            5677777788888888877777899999999998 66667778888777654   5789999999999999999999888


Q ss_pred             CCCCCCCCCC
Q psy782           91 ERPLLPHQLV  100 (100)
Q Consensus        91 g~~~~~~~eI  100 (100)
                      |+.++++++|
T Consensus        81 g~~~~~~~~i   90 (387)
T PRK08912         81 GLDLDPETEV   90 (387)
T ss_pred             CCCCCCcccE
Confidence            9988886343

>PRK06107 aspartate aminotransferase; Provisional

Probab=99.33  E-value=8.2e-12  Score=88.91  Aligned_cols=91  Identities=19%  Similarity=0.181  Sum_probs=72.8

Q ss_pred             ccCCCCChhhcccchhHHHHHHHh-----hcCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHH
Q psy782            5 ASKFALPPRFEASVYSVWVEFIQL-----SLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIV   79 (100)
Q Consensus         5 m~~~~~s~r~~~~~~~~~~~~~~~-----~~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR   79 (100)
                      |++|++++|+.....+.+..+...     ....++|+|+.|.|++ .+++.+.+++.+++...   .++|+++.|.++||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~-~~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr   76 (402)
T PRK06107          1 MSTFVPAARVSRIKPSPSTAAAARARELRAAGRSIVDLTVGEPDF-DTPDHIKQAAVAAIERG---ETKYTLVNGTPALR   76 (402)
T ss_pred             CCchhhhHHhhhcCccHHHHHHHHHHHHHhccCCEEEcCCCCCCC-CCCHHHHHHHHHHHHcC---CCCCCCCCCCHHHH
Confidence            445578889987777665444332     2345789999999999 77888999999988764   57899999999999


Q ss_pred             HHHHHHHhhhhCCCCCCCCCC
Q psy782           80 QAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        80 ~aia~~~~~~~g~~~~~~~eI  100 (100)
                      +++++++++.+|+.++++ +|
T Consensus        77 ~~ia~~l~~~~g~~~~~~-~i   96 (402)
T PRK06107         77 KAIIAKLERRNGLHYADN-EI   96 (402)
T ss_pred             HHHHHHHHHhcCCCCChh-hE
Confidence            999999998889988877 54

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=99.33  E-value=5.1e-12  Score=92.74  Aligned_cols=88  Identities=17%  Similarity=0.185  Sum_probs=69.5

Q ss_pred             CCCCChhhcccchhHHHHHHHhh-----cCCCceecCCCCCC---CCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHH
Q psy782            7 KFALPPRFEASVYSVWVEFIQLS-----LDHKPLNLGQGFPD---YESAPSHVSKGLADAATGENKLLNQYTRGFGHPRI   78 (100)
Q Consensus         7 ~~~~s~r~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~P~---~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~L   78 (100)
                      .+.+++|+.++..+.+..+...+     ...++|+|++|+|+   + .+|+.+.+++.+.+..    .++|++..|+++|
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~-~~p~~~~~~~~~~~~~----~~~Y~~~~G~~~l  190 (517)
T PRK13355        116 TFKKSHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNPAPFGF-RTPDEVVYDMAQQLTD----TEGYSDSKGLFSA  190 (517)
T ss_pred             CCChhHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCCCcCCC-CCCHHHHHHHHHHhhc----CCCCCCCcChHHH
Confidence            35678999998888776665432     23579999999994   5 6788888988887753    4689999999999


Q ss_pred             HHHHHHHHhhhhCCCCCCCCCC
Q psy782           79 VQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        79 R~aia~~~~~~~g~~~~~~~eI  100 (100)
                      |++||++++++++..++++ +|
T Consensus       191 Reaia~~~~~~~~~~~~~~-~I  211 (517)
T PRK13355        191 RKAIMQYAQLKGLPNVDVD-DI  211 (517)
T ss_pred             HHHHHHHHHhcCCCCCChh-HE
Confidence            9999999988765568887 54

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=99.32  E-value=1e-11  Score=87.87  Aligned_cols=88  Identities=18%  Similarity=0.257  Sum_probs=69.8

Q ss_pred             CChhhcccchhHHHHHHHhh-----cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHH
Q psy782           10 LPPRFEASVYSVWVEFIQLS-----LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAK   84 (100)
Q Consensus        10 ~s~r~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~   84 (100)
                      +++|+..+..+.+..+.+..     ...++|+|+.|+|++ .|++.+.+++.+++...  ...+|++..|.++||++||+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~   79 (388)
T PRK07366          3 FAQRLQPLQSNVFADMDRAKAQARAAGKELIDLSLGSSDL-PAPAHALEAIAQSLHDP--STHGYLLFHGTLDFREAAAQ   79 (388)
T ss_pred             hhhhhhcCCccHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-CCCHHHHHHHHHHHhCc--ccCCCCCCCCCHHHHHHHHH
Confidence            56777777766665554432     235789999999999 88889999999887654  35789999999999999999


Q ss_pred             HHhhhhCCCCCCCCCC
Q psy782           85 LYSSLIERPLLPHQLV  100 (100)
Q Consensus        85 ~~~~~~g~~~~~~~eI  100 (100)
                      ++.+.+|+.++++++|
T Consensus        80 ~~~~~~g~~~~~~~~I   95 (388)
T PRK07366         80 WYEQRFGLAVDPETEV   95 (388)
T ss_pred             HHHHhhCCcCCCcCeE
Confidence            9998889988887334

>PRK08960 hypothetical protein; Provisional

Probab=99.29  E-value=1.5e-11  Score=87.12  Aligned_cols=87  Identities=18%  Similarity=0.235  Sum_probs=72.9

Q ss_pred             CCChhhcccchhHHHHHHHhhc-----CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHH
Q psy782            9 ALPPRFEASVYSVWVEFIQLSL-----DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIA   83 (100)
Q Consensus         9 ~~s~r~~~~~~~~~~~~~~~~~-----~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia   83 (100)
                      .++.+++++..+.+..+.+.+.     .+++|+|+.|.|++ ++|+.+.+++.+.+...   ..+|++..|.++||++||
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~v~~a~~~~~~~~---~~~Y~~~~g~~~lr~~ia   79 (387)
T PRK08960          4 GYSRRSRDIEPFHVMALLARANELEAAGHDVIHLEIGEPDF-TTAEPIVAAGQAALAAG---HTRYTAARGLPALREAIA   79 (387)
T ss_pred             chhhHHHhCCchHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-CCCHHHHHHHHHHHhcC---CCccCCCCCCHHHHHHHH
Confidence            3577888888888877776543     35789999999998 88999999999988754   568999999999999999


Q ss_pred             HHHhhhhCCCCCCCCCC
Q psy782           84 KLYSSLIERPLLPHQLV  100 (100)
Q Consensus        84 ~~~~~~~g~~~~~~~eI  100 (100)
                      +++.+.+|+.++++ +|
T Consensus        80 ~~~~~~~g~~~~~~-~i   95 (387)
T PRK08960         80 GFYAQRYGVDVDPE-RI   95 (387)
T ss_pred             HHHHHHhCCCCChh-hE
Confidence            99998889988887 54

>PLN02368 alanine transaminase

Probab=99.29  E-value=4.4e-12  Score=90.91  Aligned_cols=90  Identities=17%  Similarity=0.176  Sum_probs=67.1

Q ss_pred             CCChhhcccchhHHHHHHHhh-----cCCCceecCCCCCCCC-----------------------------CchHHHHHH
Q psy782            9 ALPPRFEASVYSVWVEFIQLS-----LDHKPLNLGQGFPDYE-----------------------------SAPSHVSKG   54 (100)
Q Consensus         9 ~~s~r~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~P~~~-----------------------------~pp~~l~~a   54 (100)
                      .+++|+..+..+.+..+...+     ...++|+|++|+|++.                             +|++.+.++
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a   89 (407)
T PLN02368         10 SLNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARA   89 (407)
T ss_pred             hcCHHHHhhhhhcCCHHHHHHHHHHHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHH
Confidence            468888888777665554432     2358999999999730                             277888888


Q ss_pred             HHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           55 LADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        55 ~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      +....... ...++|++..|+++||++||+++++++|+.++++ +|
T Consensus        90 ~~~l~~~~-~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~-~I  133 (407)
T PLN02368         90 KHYLSLTS-GGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPE-LI  133 (407)
T ss_pred             HHHHhcCC-CCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChh-hE
Confidence            76533221 1367899999999999999999998889988887 54

>PRK07337 aminotransferase; Validated

Probab=99.27  E-value=2.1e-11  Score=86.36  Aligned_cols=87  Identities=25%  Similarity=0.367  Sum_probs=70.8

Q ss_pred             CCChhhcccchhHHHHHHHhhc-----CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHH
Q psy782            9 ALPPRFEASVYSVWVEFIQLSL-----DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIA   83 (100)
Q Consensus         9 ~~s~r~~~~~~~~~~~~~~~~~-----~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia   83 (100)
                      ++++++.....+.+..+.+...     ..++|+|+.|.|++ .+++.+.+++.+.++..   ..+|++..|.++||++||
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~-~~~~~~~~~~~~~~~~~---~~~Y~~~~g~~~lr~~ia   77 (388)
T PRK07337          2 RLAARVDAIEPFYVMELAKEAQALERAGRDIIHMGIGEPDF-TAPEPVVEAAARALRRG---VTQYTSALGLAPLREAIA   77 (388)
T ss_pred             chhhHhHhcCchHHHHHHHHHHHHHhcCCCEEEeCCcCCCC-CCCHHHHHHHHHHHhcC---CCCCCCCCCCHHHHHHHH
Confidence            4577777777776666655432     35799999999999 77888899999888754   678999999999999999


Q ss_pred             HHHhhhhCCCCCCCCCC
Q psy782           84 KLYSSLIERPLLPHQLV  100 (100)
Q Consensus        84 ~~~~~~~g~~~~~~~eI  100 (100)
                      +++.+.+|+.++++ +|
T Consensus        78 ~~~~~~~~~~~~~~-~i   93 (388)
T PRK07337         78 AWYARRFGLDVAPE-RI   93 (388)
T ss_pred             HHHHHHhCCCCChH-hE
Confidence            99998889888887 54

>PRK06108 aspartate aminotransferase; Provisional

Probab=99.26  E-value=4.5e-11  Score=84.12  Aligned_cols=84  Identities=24%  Similarity=0.224  Sum_probs=69.1

Q ss_pred             hhhcccchhHHHHHHHhhc-CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhh
Q psy782           12 PRFEASVYSVWVEFIQLSL-DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLI   90 (100)
Q Consensus        12 ~r~~~~~~~~~~~~~~~~~-~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~   90 (100)
                      +++..+..+.+..+...+. ..++|+|+.|+|++ ++++.+.+++.+++.+.   ..+|++..|.++||++||+++.+.+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~la~~~~~~~   78 (382)
T PRK06108          3 PAARALPESGIREVANAGRGREGVLPLWFGESDL-PTPDFIRDAAAAALADG---ETFYTHNLGIPELREALARYVSRLH   78 (382)
T ss_pred             hhhhhCCchHHHHHHHHHhccCCeEEecCCCCCC-CCCHHHHHHHHHHHhcC---CCCCCCCCCCHHHHHHHHHHHHHHh
Confidence            3455566677777777653 35789999999999 88899999999988775   5679999999999999999999888


Q ss_pred             CCCCCCCCCC
Q psy782           91 ERPLLPHQLV  100 (100)
Q Consensus        91 g~~~~~~~eI  100 (100)
                      |+.++++ +|
T Consensus        79 ~~~~~~~-~i   87 (382)
T PRK06108         79 GVATPPE-RI   87 (382)
T ss_pred             CCCcCcc-eE
Confidence            9888877 54

>PRK06348 aspartate aminotransferase; Provisional

Probab=99.25  E-value=3.4e-11  Score=85.23  Aligned_cols=89  Identities=17%  Similarity=0.231  Sum_probs=70.9

Q ss_pred             CCCCChhhcccchhHHHHHHHhhc-CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHH
Q psy782            7 KFALPPRFEASVYSVWVEFIQLSL-DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKL   85 (100)
Q Consensus         7 ~~~~s~r~~~~~~~~~~~~~~~~~-~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~   85 (100)
                      +..+++++.......++.+.+... ..++|+|+.|+|++ .+++.+.+++.+.+...   ..+|++..|.++||++||++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~-~~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~   78 (384)
T PRK06348          3 NKFLAKKYQQMEVNIMAEIATLAKKFPDIIDLSLGDPDL-ITDESIINAAFEDAKKG---HTRYTDSGGDVELIEEIIKY   78 (384)
T ss_pred             chHHHHHHhcCCccHHHHHHHHHHhcCCcEEcCCCCCCC-CCCHHHHHHHHHHHhcC---CCCCCCCCCcHHHHHHHHHH
Confidence            334677888888888888877654 35799999999999 77777776665555544   67899999999999999999


Q ss_pred             HhhhhCCCCCCCCCC
Q psy782           86 YSSLIERPLLPHQLV  100 (100)
Q Consensus        86 ~~~~~g~~~~~~~eI  100 (100)
                      +.+.+|+.++++ +|
T Consensus        79 ~~~~~~~~~~~~-~i   92 (384)
T PRK06348         79 YSKNYDLSFKRN-EI   92 (384)
T ss_pred             HHHHhCCCCChh-hE
Confidence            988889988887 54

>PTZ00377 alanine aminotransferase; Provisional

Probab=99.25  E-value=1e-11  Score=90.45  Aligned_cols=90  Identities=19%  Similarity=0.183  Sum_probs=67.0

Q ss_pred             CCChhhcccchhHHHHHHH----hh----cC------CCceecCCCCCC----------------CCCc-----------
Q psy782            9 ALPPRFEASVYSVWVEFIQ----LS----LD------HKPLNLGQGFPD----------------YESA-----------   47 (100)
Q Consensus         9 ~~s~r~~~~~~~~~~~~~~----~~----~~------~~~i~l~~G~P~----------------~~~p-----------   47 (100)
                      .+++|+.++..+....+..    +.    ..      .++|+|++|+|+                + .+           
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~~~   87 (481)
T PTZ00377          9 DINPRVVAAEYAVRGLVPARAAEIKEELKTGKGKYPFDSIVYCNIGNPQALGQKPLTFYRQVLSLV-EYPFLLEDPSVSS   87 (481)
T ss_pred             ccCHHHhhhhhhcCChHHHHHHHHHHHHhcCCccCCcceeEEcCCCChhhcCCCCchHHHHHHHHc-cChhhhcCccccc
Confidence            4788888887765443322    11    11      479999999996                7 55           


Q ss_pred             --hHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           48 --PSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        48 --p~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                        |..+.+++.++++.......+|++..|+++||++||+++.+.+|+.++++ +|
T Consensus        88 ~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~-~I  141 (481)
T PTZ00377         88 LFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPS-DI  141 (481)
T ss_pred             cCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChh-hE
Confidence              34777777777765322357799999999999999999998889999887 64

>PRK08068 transaminase; Reviewed

Probab=99.25  E-value=6e-11  Score=84.07  Aligned_cols=89  Identities=25%  Similarity=0.355  Sum_probs=69.8

Q ss_pred             CCCChhhcccchhHHHHHHHhh-----cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHH
Q psy782            8 FALPPRFEASVYSVWVEFIQLS-----LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAI   82 (100)
Q Consensus         8 ~~~s~r~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~ai   82 (100)
                      ..+++++.....+.+..+....     ...++|+|+.|+|++ .+++.+.+++.+++...  ...+|++..|.++||++|
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~-~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~ai   79 (389)
T PRK08068          3 FEPSELLKQLPKQFFASLVAKVNKKVAEGHDVINLGQGNPDQ-PTPEHIVEALQEAAENP--ANHKYSPFRGYPFLKEAA   79 (389)
T ss_pred             CchhhHhhhcCccHHHHHHHHHHHHHhcCCCeEEecCCCCCC-CCCHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHH
Confidence            3567777777776666665532     235789999999998 77777899998887654  357899999999999999


Q ss_pred             HHHHhhhhCCCCCCCCC
Q psy782           83 AKLYSSLIERPLLPHQL   99 (100)
Q Consensus        83 a~~~~~~~g~~~~~~~e   99 (100)
                      |+++.+.+|++++++++
T Consensus        80 a~~~~~~~g~~~~~~~~   96 (389)
T PRK08068         80 ADFYKREYGVTLDPETE   96 (389)
T ss_pred             HHHHHHHhCCCCCCCcc
Confidence            99998888988888633

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=99.25  E-value=6.5e-11  Score=83.66  Aligned_cols=88  Identities=23%  Similarity=0.281  Sum_probs=69.4

Q ss_pred             CChhhcccchhHHHHHHHhh-----cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHH
Q psy782           10 LPPRFEASVYSVWVEFIQLS-----LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAK   84 (100)
Q Consensus        10 ~s~r~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~   84 (100)
                      +++++.....+.+..+.+.+     ...++|+|+.|+|++ .+++.+.+++.+++...  ..++|++..|+++||++||+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~   80 (385)
T PRK09276          4 LADRIKNLPPYLFAEIDKKKAEKIARGVDVISLGIGDPDL-PTPDHIIEAMCKAVEDP--ENHQYPSYEGMLEFRKAVAD   80 (385)
T ss_pred             hhhHhhhCCccHHHHHHHHHHHHHhcCCCEEEecCCCCCC-CCCHHHHHHHHHHHhCC--CCCCCCCCCCcHHHHHHHHH
Confidence            56777777776665554432     235789999999999 88889999999888653  35789999999999999999


Q ss_pred             HHhhhhCCCCCCCCCC
Q psy782           85 LYSSLIERPLLPHQLV  100 (100)
Q Consensus        85 ~~~~~~g~~~~~~~eI  100 (100)
                      ++.+.+|++++++++|
T Consensus        81 ~~~~~~g~~~~~~~~i   96 (385)
T PRK09276         81 WYKRRFGVELDPETEV   96 (385)
T ss_pred             HHHHHhCCCCCCCCcE
Confidence            9998889888876333

>PRK12414 putative aminotransferase; Provisional

Probab=99.24  E-value=5.9e-11  Score=84.08  Aligned_cols=83  Identities=24%  Similarity=0.337  Sum_probs=68.4

Q ss_pred             ChhhcccchhHHHHHHHhhcCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhh
Q psy782           11 PPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLI   90 (100)
Q Consensus        11 s~r~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~   90 (100)
                      ..++..+..+++..+.+.....++|+|+.|.|++ +|++.+.+++.+++...   ..+|++..|+++||++|++++++.+
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~-~~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~   83 (384)
T PRK12414          8 RSKLPDVGTTIFTVIGQLAAQHDALNLSQGAPNF-APDPALVEGVARAMRDG---HNQYAPMAGIAALREALAEKTERLY   83 (384)
T ss_pred             HHhcccCCccHHHHHHHHHHhCCeEEcCCCCCCC-CCCHHHHHHHHHHHHhC---CCCcCCCCCcHHHHHHHHHHHHHHh
Confidence            3455666666666666666667899999999999 88899999999888754   5789999999999999999999888


Q ss_pred             CCCCCCC
Q psy782           91 ERPLLPH   97 (100)
Q Consensus        91 g~~~~~~   97 (100)
                      |+.++++
T Consensus        84 g~~~~~~   90 (384)
T PRK12414         84 GARYDPA   90 (384)
T ss_pred             CCCCCCC
Confidence            9887763

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=99.23  E-value=5.9e-11  Score=84.27  Aligned_cols=84  Identities=26%  Similarity=0.362  Sum_probs=67.1

Q ss_pred             hhhcccchhHHHHHHHhhc------CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHH
Q psy782           12 PRFEASVYSVWVEFIQLSL------DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKL   85 (100)
Q Consensus        12 ~r~~~~~~~~~~~~~~~~~------~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~   85 (100)
                      +++..+..+.+..+.+.+.      +.++|+|++|+|++ .|++.+.+++.+.+. .   ..+|++..|.++||++||++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~-~~~~~~~~~~~~~~~-~---~~~Y~~~~G~~~lr~~ia~~   77 (396)
T PRK09147          3 PRLDRLQPYPFEKLRALFAGVTPPADLPPISLSIGEPKH-PTPAFIKDALAANLD-G---LASYPTTAGLPALREAIAAW   77 (396)
T ss_pred             chhhcCCcchHHHHHHHHHhhhhccCCCeEecCCCCCCC-CCCHHHHHHHHHHhh-h---hcCCCCCCCCHHHHHHHHHH
Confidence            3556666667766666543      34799999999999 888999999988764 3   67899999999999999999


Q ss_pred             HhhhhCCC-CCCCCCC
Q psy782           86 YSSLIERP-LLPHQLV  100 (100)
Q Consensus        86 ~~~~~g~~-~~~~~eI  100 (100)
                      +.+.+|++ ++++++|
T Consensus        78 ~~~~~g~~~~~~~~~i   93 (396)
T PRK09147         78 LERRYGLPALDPATQV   93 (396)
T ss_pred             HHHHhCCCcCCccceE
Confidence            99888988 8885343

>PRK05942 aspartate aminotransferase; Provisional

Probab=99.23  E-value=8.5e-11  Score=83.48  Aligned_cols=87  Identities=24%  Similarity=0.243  Sum_probs=65.6

Q ss_pred             CCChhhcccchhHHHHHHHhh-----cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHH
Q psy782            9 ALPPRFEASVYSVWVEFIQLS-----LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIA   83 (100)
Q Consensus         9 ~~s~r~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia   83 (100)
                      .+++++..+..+.+..+.+.+     .+.++|+|+.|+|++ ++|..+.+++.+.+...  ..++|+++.|.++||++||
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~p~~-~~p~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia   83 (394)
T PRK05942          7 TPADRLQALPPYVFARLDELKARAREQGLDLIDLGMGNPDG-AAPQPVIEAAIAALADP--QNHGYPPFEGTASFRQAIT   83 (394)
T ss_pred             chhhhhccCCCcHHHHHHHHHHHHHhcCCCeEEcCCCCCCC-CCCHHHHHHHHHHHhCC--CCccCCCCCCCHHHHHHHH
Confidence            456777776666554444322     235689999999998 77777777776666543  3578999999999999999


Q ss_pred             HHHhhhhCCCCCCCC
Q psy782           84 KLYSSLIERPLLPHQ   98 (100)
Q Consensus        84 ~~~~~~~g~~~~~~~   98 (100)
                      +++.+.+|+.+++++
T Consensus        84 ~~~~~~~~~~~~~~~   98 (394)
T PRK05942         84 DWYHRRYGVELDPDS   98 (394)
T ss_pred             HHHHHHHCCCcCCCC
Confidence            999988898888874

>PRK05764 aspartate aminotransferase; Provisional

Probab=99.22  E-value=4.5e-11  Score=84.57  Aligned_cols=85  Identities=22%  Similarity=0.302  Sum_probs=71.7

Q ss_pred             CCChhhcccchhHHHHHHHhhc-----CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHH
Q psy782            9 ALPPRFEASVYSVWVEFIQLSL-----DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIA   83 (100)
Q Consensus         9 ~~s~r~~~~~~~~~~~~~~~~~-----~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia   83 (100)
                      .++.|+..+..+.+..+...+.     ..++++|+.|.|++ .+++.+.+++.+++...   ..+|++..|.+.||++||
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~---~~~Y~~~~g~~~lr~~ia   78 (393)
T PRK05764          3 KLSKRVSRVTPSATLAVTAKAKELKAQGRDVISLGAGEPDF-DTPEHIKEAAIEALDDG---KTKYTPAAGIPELREAIA   78 (393)
T ss_pred             chhhhhhhcCchHHHHHHHHHHHHHhccCCEEEeCCCCCCC-CCCHHHHHHHHHHHhcC---CCCcCCCCChHHHHHHHH
Confidence            4789999988888877766543     35789999999999 77889999999888765   567999999999999999


Q ss_pred             HHHhhhhCCCCCCC
Q psy782           84 KLYSSLIERPLLPH   97 (100)
Q Consensus        84 ~~~~~~~g~~~~~~   97 (100)
                      +++.+.+|+.++++
T Consensus        79 ~~~~~~~~~~~~~~   92 (393)
T PRK05764         79 AKLKRDNGLDYDPS   92 (393)
T ss_pred             HHHHHHhCCCCCHH
Confidence            99988888777776

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=99.21  E-value=1.3e-10  Score=82.17  Aligned_cols=88  Identities=26%  Similarity=0.293  Sum_probs=67.2

Q ss_pred             CChhhcccchhHHHHHHHhh-----cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHH
Q psy782           10 LPPRFEASVYSVWVEFIQLS-----LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAK   84 (100)
Q Consensus        10 ~s~r~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~   84 (100)
                      ++.|+.....+.+..+.+.+     .+.++++|+.|.|++ .+++.+.+++.+++...  ..++|+++.|+++||++||+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~   78 (383)
T TIGR03540         2 LADRIENLPPYLFAEIDKKKAEKKAEGVDVISLGIGDPDL-PTPKHIVEALCKAAENP--ENHRYPSYEGMLAYRQAVAD   78 (383)
T ss_pred             cchhhccCChhHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-CCCHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHH
Confidence            34555555555555554433     235789999999999 77889999998887654  35789999999999999999


Q ss_pred             HHhhhhCCCCCCCCCC
Q psy782           85 LYSSLIERPLLPHQLV  100 (100)
Q Consensus        85 ~~~~~~g~~~~~~~eI  100 (100)
                      ++.+.+|+.++++++|
T Consensus        79 ~~~~~~~~~~~~~~~v   94 (383)
T TIGR03540        79 WYKRRFGVELDPETEV   94 (383)
T ss_pred             HHHHhhCCCCCCCCeE
Confidence            9998889888776343

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>PRK07683 aminotransferase A; Validated

Probab=99.21  E-value=1.1e-10  Score=82.81  Aligned_cols=86  Identities=22%  Similarity=0.312  Sum_probs=71.7

Q ss_pred             ChhhcccchhHHHHHHHhhc-CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhh
Q psy782           11 PPRFEASVYSVWVEFIQLSL-DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSL   89 (100)
Q Consensus        11 s~r~~~~~~~~~~~~~~~~~-~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~   89 (100)
                      +.++..+..+.+..+..... ..++|+|+.|.|++ ++++.+.+++.+++...   ..+|++..|.++||++||+++.+.
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~-~~~~~~~~a~~~~~~~~---~~~Y~~~~g~~~lr~~ia~~l~~~   81 (387)
T PRK07683          6 NPRVKDIQISGIRQFSNMVQNYDNLISLTIGQPDF-PTPSHVKEAAKRAITEN---YTSYTHNAGLLELRKAACNFVKDK   81 (387)
T ss_pred             hHHHHhCCccHHHHHHHHHHhcCCeEEecCCCCCC-CCCHHHHHHHHHHHhcC---CCCCCCCCCCHHHHHHHHHHHHHH
Confidence            56778778888877777653 46789999999998 77889999999988765   678999999999999999999887


Q ss_pred             hCCCCCCCCCC
Q psy782           90 IERPLLPHQLV  100 (100)
Q Consensus        90 ~g~~~~~~~eI  100 (100)
                      +|+.++++++|
T Consensus        82 ~g~~~~~~~~I   92 (387)
T PRK07683         82 YDLHYSPESEI   92 (387)
T ss_pred             hCCCCCCCCcE
Confidence            89988886343

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=99.19  E-value=5.4e-11  Score=85.07  Aligned_cols=66  Identities=21%  Similarity=0.284  Sum_probs=58.0

Q ss_pred             CCCceecCCCCCC----CCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           31 DHKPLNLGQGFPD----YESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        31 ~~~~i~l~~G~P~----~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      ..++|+|++|+|+    + .+|+.+.+++.++++..  ..++|++..|.++||++||+++.+.+|+.++++ +|
T Consensus        31 ~~~~i~l~~G~p~~~~~~-~~p~~~~~a~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~-~I  100 (409)
T PLN00143         31 HRLAISFGFGDPSCFECF-RTTNIAEDAIVEAVRSA--KFNSYAPTGGILPARRAIADYLSNDLPYQLSPD-DV  100 (409)
T ss_pred             CCceeeCCCCCCCCCCCC-CCCHHHHHHHHHHHhCc--CCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHh-hE
Confidence            4689999999999    7 88899999999988765  357899999999999999999998889888887 54

>PRK08363 alanine aminotransferase; Validated

Probab=99.19  E-value=7.2e-11  Score=83.90  Aligned_cols=85  Identities=21%  Similarity=0.227  Sum_probs=65.5

Q ss_pred             CChhhcccchhHHHHHHHhh-----cCCCceecCCCCC---CCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHH
Q psy782           10 LPPRFEASVYSVWVEFIQLS-----LDHKPLNLGQGFP---DYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQA   81 (100)
Q Consensus        10 ~s~r~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~P---~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~a   81 (100)
                      ++.++..+. +.++.+....     ...++|+|+.|.|   ++ .|++.+.+++.++++..   ...|++..|.++||++
T Consensus         4 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~-~p~~~~~~~~~~~~~~~---~~~Y~~~~g~~~lr~~   78 (398)
T PRK08363          4 ASERAMGVE-YAIRDVVLPARELEKKGIKVIRLNIGDPVKFDF-QPPEHMKEAYCRAIKEG---HNYYGPSEGLPELREA   78 (398)
T ss_pred             hhHHHHhcc-HHHHHHHHHHHHHHhcCCCeEEEeCCCCCcCCC-CCCHHHHHHHHHHHHcC---CCCCCCCCCcHHHHHH
Confidence            456666554 3344443322     2347999999999   56 78899999999988765   5689999999999999


Q ss_pred             HHHHHhhhhCCCCCCCCCC
Q psy782           82 IAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        82 ia~~~~~~~g~~~~~~~eI  100 (100)
                      ||+++.+.+|+.++++ +|
T Consensus        79 ia~~~~~~~g~~~~~~-~i   96 (398)
T PRK08363         79 IVKREKRKNGVDITPD-DV   96 (398)
T ss_pred             HHHHHHHhcCCCCChh-hE
Confidence            9999998889888887 54

>PRK09082 methionine aminotransferase; Validated

Probab=99.18  E-value=1.8e-10  Score=81.60  Aligned_cols=86  Identities=26%  Similarity=0.358  Sum_probs=72.3

Q ss_pred             CChhhcccchhHHHHHHHhhcCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhh
Q psy782           10 LPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSL   89 (100)
Q Consensus        10 ~s~r~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~   89 (100)
                      ++.|+..+..+.+..+....++.++|+|+.|.|++ .+++.+.+++.+++...   .++|++..|.++||+++++++.+.
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~~a~~l~~~   83 (386)
T PRK09082          8 PQSKLPNVGTTIFTVMSALAAEHGAINLSQGFPDF-DGPPYLVEALAYAMAAG---HNQYPPMTGVAALREAIAAKTARL   83 (386)
T ss_pred             hhhHhhccCccHHHHHHHHHhhCCEEEecCCCCCC-CCCHHHHHHHHHHHHcC---CCCCCCCCCcHHHHHHHHHHHHHH
Confidence            56777778888888777777777899999999999 77788999999888765   678999999999999999999988


Q ss_pred             hCCCCCCCCC
Q psy782           90 IERPLLPHQL   99 (100)
Q Consensus        90 ~g~~~~~~~e   99 (100)
                      +|+.++++.+
T Consensus        84 ~~~~~~~~~~   93 (386)
T PRK09082         84 YGRQYDADSE   93 (386)
T ss_pred             hCCCCCCCCc
Confidence            8988776533

>PRK07777 aminotransferase; Validated

Probab=99.17  E-value=2.4e-10  Score=80.93  Aligned_cols=82  Identities=29%  Similarity=0.457  Sum_probs=68.7

Q ss_pred             hhhcccchhHHHHHHHhhcCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhC
Q psy782           12 PRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIE   91 (100)
Q Consensus        12 ~r~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g   91 (100)
                      .++..+..+.+..+.+.+...++|+|++|.|++ ..|+.+.+++.+++...   ..+|++..|.++||++|++++.+.+|
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~-~~~~~~~~~~~~~~~~~---~~~Y~~~~g~~~lr~~ia~~~~~~~g   79 (387)
T PRK07777          4 SRLRPFGTTIFAEMSALAVRTGAVNLGQGFPDE-DGPPEMLEAAQEAIAGG---VNQYPPGPGIPELRAAIAAQRRRRYG   79 (387)
T ss_pred             hhhhhcCccHHHHHHHHHhhCCeEEccCCCCCC-CCCHHHHHHHHHHHhcC---CCCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            456677777888888887777899999999999 55666788888877654   57899999999999999999988889


Q ss_pred             CCCCCC
Q psy782           92 RPLLPH   97 (100)
Q Consensus        92 ~~~~~~   97 (100)
                      +.++++
T Consensus        80 ~~~~~~   85 (387)
T PRK07777         80 LEYDPD   85 (387)
T ss_pred             CCCCCC
Confidence            888775

>PRK08361 aspartate aminotransferase; Provisional

Probab=99.16  E-value=2.7e-10  Score=80.78  Aligned_cols=87  Identities=22%  Similarity=0.303  Sum_probs=71.6

Q ss_pred             CCChhhcccchhHHHHHHHhhc-CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHh
Q psy782            9 ALPPRFEASVYSVWVEFIQLSL-DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus         9 ~~s~r~~~~~~~~~~~~~~~~~-~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   87 (100)
                      .++.|+..+....+..+.+... ..++|+|+.|.|++ .+++.+.+++.+++...   ..+|++..|.++||++||+++.
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~-~~~~~~~~~~~~~~~~~---~~~Y~~~~g~~~lr~~ia~~~~   84 (391)
T PRK08361          9 FIAGRINLIQRSKIRELFERASKMENVISLGIGEPDF-DTPKNIKEAAKRALDEG---WTHYTPNAGIPELREAIAEYYK   84 (391)
T ss_pred             chhHHHHhCCccHHHHHHHHHHhhcCeEEcCCCCCCC-CCCHHHHHHHHHHHhcC---CCCCCCCCCcHHHHHHHHHHHH
Confidence            3577777777777777766543 35789999999999 77899999999988765   6789999999999999999998


Q ss_pred             hhhCCCCCCCCCC
Q psy782           88 SLIERPLLPHQLV  100 (100)
Q Consensus        88 ~~~g~~~~~~~eI  100 (100)
                      +.+|+.++++ +|
T Consensus        85 ~~~g~~~~~~-~i   96 (391)
T PRK08361         85 KFYGVDVDVD-NV   96 (391)
T ss_pred             HHhCCCCCcc-cE
Confidence            8889888887 54

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=99.16  E-value=2.3e-10  Score=81.20  Aligned_cols=80  Identities=23%  Similarity=0.342  Sum_probs=63.9

Q ss_pred             hhcccchhHHHHHHHhhc------CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           13 RFEASVYSVWVEFIQLSL------DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        13 r~~~~~~~~~~~~~~~~~------~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ++..+..+.+..+.+++.      +.++|+|++|+|++ .||+.+.+++.+.+. .   ..+|+++.|.++||++||+++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~-~~~~~~~~a~~~~~~-~---~~~Y~~~~G~~~lr~aia~~~   77 (393)
T TIGR03538         3 NLSRLQPYPFEKLAALLAGVTPPASKPPIALSIGEPKH-PTPAFVLEALRENLH-G---LSTYPTTKGLPELRQAIARWL   77 (393)
T ss_pred             hhhhCCccHHHHHHHHHHhhhhhcCCCeEEecCCCCCC-CCCHHHHHHHHHHhh-c---cCCCCCCCCCHHHHHHHHHHH
Confidence            344455566666666543      35799999999999 889999999988764 3   678999999999999999999


Q ss_pred             hhhhCCC--CCCC
Q psy782           87 SSLIERP--LLPH   97 (100)
Q Consensus        87 ~~~~g~~--~~~~   97 (100)
                      .+.+|++  ++++
T Consensus        78 ~~~~~~~~~~~~~   90 (393)
T TIGR03538        78 ERRFDLPTGVDPE   90 (393)
T ss_pred             HHhhCCcccCCCC
Confidence            9988886  6775

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK06855 aminotransferase; Validated

Probab=99.16  E-value=9.2e-11  Score=84.50  Aligned_cols=65  Identities=15%  Similarity=0.078  Sum_probs=56.8

Q ss_pred             CCceecCCCCC---CCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           32 HKPLNLGQGFP---DYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        32 ~~~i~l~~G~P---~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      .++++|++|+|   ++ .+|+.+.+++.++++..  ..++|++..|.++||++||+++++.+|+.++++ +|
T Consensus        32 ~~~~~~~~G~p~~~~~-~~p~~~~~a~~~~~~~~--~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~-~I   99 (433)
T PRK06855         32 VKITWENIGDPIAKGE-KIPDWMKEIVAELVMDD--KSYGYCPTKGVLETREFLAELNNKRGGAQITPD-DI   99 (433)
T ss_pred             ccccccccCCCcccCC-CCCHHHHHHHHHHhhcC--CCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHh-HE
Confidence            46899999999   56 88899999999887654  367999999999999999999999889999887 54

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=99.16  E-value=1.1e-10  Score=83.50  Aligned_cols=86  Identities=19%  Similarity=0.228  Sum_probs=65.0

Q ss_pred             hhhcccchhHHHHHHHhhcCCCceecCCCCCCCC---CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhh
Q psy782           12 PRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYE---SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSS   88 (100)
Q Consensus        12 ~r~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~---~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~   88 (100)
                      .|+.+...+.+.++.+.....++|+|+.|.|+.+   +|++.+.+++.++++..  ...+|+++.|.++||++||+++.+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~--~~~~Y~~~~G~~~Lr~aia~~~~~   90 (412)
T PTZ00433         13 GRVFNPLRTVTDNAKPSPSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQ--ECNGYPPTVGSPEAREAVATYWRN   90 (412)
T ss_pred             HhhhccHHHHHHhhccCCCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcC--CCCCCCCCCCcHHHHHHHHHHHHh
Confidence            3444444555666554456678999999999731   68899999999988763  367899999999999999999987


Q ss_pred             hh------CCCCCCCCCC
Q psy782           89 LI------ERPLLPHQLV  100 (100)
Q Consensus        89 ~~------g~~~~~~~eI  100 (100)
                      .+      |..++++ +|
T Consensus        91 ~~~~~~~~~~~~~~~-~i  107 (412)
T PTZ00433         91 SFVHKESLKSTIKKD-NV  107 (412)
T ss_pred             hccccccccCCCChh-hE
Confidence            54      4567776 53

>PRK07550 hypothetical protein; Provisional

Probab=99.16  E-value=2.1e-10  Score=81.22  Aligned_cols=87  Identities=28%  Similarity=0.342  Sum_probs=69.8

Q ss_pred             CChhhcccchhHHHHHHHhhc-----CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHH
Q psy782           10 LPPRFEASVYSVWVEFIQLSL-----DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAK   84 (100)
Q Consensus        10 ~s~r~~~~~~~~~~~~~~~~~-----~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~   84 (100)
                      +++|+....+..+..+.+...     ..+.|+|+.|+|+. ++++.+.+++.+++...  ...+|++..|.++||++||+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~   78 (386)
T PRK07550          2 LNPLIAALFPPPIPEVRAWLAGYDGADGPLIDLSQAVPGY-PPPPELLRALAEAAADP--AAHLYGPVEGLPELREAYAA   78 (386)
T ss_pred             cchhhhhcCChHHHHHHHHHHHHhhcCCCeEEeCCCCCCC-CCCHHHHHHHHHHHhCc--CCcCCCCCCCCHHHHHHHHH
Confidence            456777666667766666432     34689999999999 88899999999887543  35789999999999999999


Q ss_pred             HHhhhhCCCCCCCCCC
Q psy782           85 LYSSLIERPLLPHQLV  100 (100)
Q Consensus        85 ~~~~~~g~~~~~~~eI  100 (100)
                      ++.+.+|+.++++ +|
T Consensus        79 ~~~~~~g~~~~~~-~i   93 (386)
T PRK07550         79 HYSRLYGAAISPE-QV   93 (386)
T ss_pred             HHHHHhCCCCCcc-eE
Confidence            9998889888887 54

>PLN02656 tyrosine transaminase

Probab=99.15  E-value=1.4e-10  Score=82.96  Aligned_cols=66  Identities=24%  Similarity=0.345  Sum_probs=57.7

Q ss_pred             CCCceecCCCCCC----CCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           31 DHKPLNLGQGFPD----YESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        31 ~~~~i~l~~G~P~----~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      ..++|+|++|+|+    + .||+.+.+++.+++...  ..++|++..|.++||++||+++.+.+|+.++++ +|
T Consensus        30 ~~~~i~l~~G~p~~~~~~-~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i   99 (409)
T PLN02656         30 GKRVISLGMGDPTAYSCF-HTTHVAQEAVVDALQSN--KFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLD-DV   99 (409)
T ss_pred             CCeeeecCCCCCCcCCCC-CCCHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcc-cE
Confidence            3579999999998    7 78899999999988765  367899999999999999999998889888887 54

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=99.15  E-value=2.5e-10  Score=81.04  Aligned_cols=87  Identities=22%  Similarity=0.234  Sum_probs=71.4

Q ss_pred             CChhhcccchhHHHHHHHhh-cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhh
Q psy782           10 LPPRFEASVYSVWVEFIQLS-LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSS   88 (100)
Q Consensus        10 ~s~r~~~~~~~~~~~~~~~~-~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~   88 (100)
                      +++|+.....+.++.+.+.. ...++|+|+.|+|++ .+++.+.+++.+++...   ..+|++..|.++||++||+++.+
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~-~~~~~~~~~~~~~~~~~---~~~Y~~~~g~~~lr~~ia~~~~~   82 (391)
T PRK07309          7 FNKQLDKIEVSLIRQFDQSISDIPGILKLTLGEPDF-TTPDHVKEAAKRAIDAN---QSHYTGMAGLLELRQAAADFVKE   82 (391)
T ss_pred             HHhhhhhcCccHHHHHHHHHHhcCCeEEcCCCCCCC-CCCHHHHHHHHHHHhcC---CCCCCCCCCcHHHHHHHHHHHHH
Confidence            47778777777888887743 346899999999999 88889999999888754   56799999999999999999998


Q ss_pred             hhCCCCCCCCCC
Q psy782           89 LIERPLLPHQLV  100 (100)
Q Consensus        89 ~~g~~~~~~~eI  100 (100)
                      .+|+.++++++|
T Consensus        83 ~~~~~~~~~~~i   94 (391)
T PRK07309         83 KYNLDYAPENEI   94 (391)
T ss_pred             HhCCCCCCCCcE
Confidence            889887764344

>PRK09148 aminotransferase; Validated

Probab=99.15  E-value=3.1e-10  Score=81.06  Aligned_cols=87  Identities=24%  Similarity=0.345  Sum_probs=67.2

Q ss_pred             ChhhcccchhHHHHHHHhh-----cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHH
Q psy782           11 PPRFEASVYSVWVEFIQLS-----LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKL   85 (100)
Q Consensus        11 s~r~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~   85 (100)
                      ++++..+..+.+..+.+..     ...++|+|+.|+|++ .+++.+.+++.+++...  ..++|++..|.++||++||++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~-~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~   80 (405)
T PRK09148          4 FHRIRRLPPYVFEQVNRLKAAARAAGADIIDLGMGNPDL-PTPQHIVDKLCETAQDP--RTHRYSASKGIPGLRRAQAAY   80 (405)
T ss_pred             hhhhhcCCccHHHHHHHHHHHHHhcCCCeEEcCCCCCCC-CCCHHHHHHHHHHHcCc--ccCCCCCCCCCHHHHHHHHHH
Confidence            4556666666666665433     235789999999998 77888888888877543  357899999999999999999


Q ss_pred             HhhhhCCCCCCCCCC
Q psy782           86 YSSLIERPLLPHQLV  100 (100)
Q Consensus        86 ~~~~~g~~~~~~~eI  100 (100)
                      +.+.+|+.++++++|
T Consensus        81 ~~~~~g~~~~~~~~I   95 (405)
T PRK09148         81 YARRFGVKLNPDTQV   95 (405)
T ss_pred             HHHHhCCCCCCCCcE
Confidence            988789888886343

>PRK07681 aspartate aminotransferase; Provisional

Probab=99.15  E-value=2.8e-10  Score=80.95  Aligned_cols=88  Identities=23%  Similarity=0.278  Sum_probs=68.8

Q ss_pred             CCChhhcccchhHHHHHHHhh-----cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHH
Q psy782            9 ALPPRFEASVYSVWVEFIQLS-----LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIA   83 (100)
Q Consensus         9 ~~s~r~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia   83 (100)
                      .+++|+.....+.+..+...+     ...++|+|+.|.|++ .|++.+.+++.+++...  ...+|+ ..|.++||++||
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~-~~~~~~~~~~~~~~~~~--~~~~y~-~~G~~~lr~aia   79 (399)
T PRK07681          4 TLATRMKAFQSSIFSELGAYKKEKIAAGHKMIDLSIGNPDM-PPADFVREEMVHTANQK--ESYGYT-LSGIQEFHEAVT   79 (399)
T ss_pred             cHhHHHhhcCccHHHHHHHHHHHhhhcCCCeEEeCCCCCCC-CCCHHHHHHHHHHHhcc--ccCCCC-CCCcHHHHHHHH
Confidence            457788777777777766543     235789999999999 88889999999887653  245565 589999999999


Q ss_pred             HHHhhhhCCCCCCCCCC
Q psy782           84 KLYSSLIERPLLPHQLV  100 (100)
Q Consensus        84 ~~~~~~~g~~~~~~~eI  100 (100)
                      +++.+.+|+.++++++|
T Consensus        80 ~~~~~~~g~~~~~~~~I   96 (399)
T PRK07681         80 EYYNNTHNVILNADKEV   96 (399)
T ss_pred             HHHHHHhCCCCCCCCeE
Confidence            99998889999883254

>PRK07682 hypothetical protein; Validated

Probab=99.14  E-value=4e-10  Score=79.51  Aligned_cols=78  Identities=23%  Similarity=0.306  Sum_probs=62.4

Q ss_pred             hhHHHHHHHhhcC-CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCC
Q psy782           19 YSVWVEFIQLSLD-HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        19 ~~~~~~~~~~~~~-~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~   97 (100)
                      ...+..+.+.+.. .++|+|+.|+|++ .+++.+.+++.+++...   .++|++..|.++||++||+++.+.+|+.++++
T Consensus         6 ~~~~~~~~~~~~~~~~~i~l~~~~~~~-~~~~~~~~~~~~~~~~~---~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~   81 (378)
T PRK07682          6 PSGIRKFFDLAANMEGVISLGVGEPDF-VTPWNVREASIRSLEQG---YTSYTANAGLLELRQEIAKYLKKRFAVSYDPN   81 (378)
T ss_pred             ccHHHHHHHHHHhcCCeEEeCCCCCCC-CCCHHHHHHHHHHHhcC---CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCC
Confidence            3445555554433 4799999999999 77888889988887654   67899999999999999999999889988876


Q ss_pred             CCC
Q psy782           98 QLV  100 (100)
Q Consensus        98 ~eI  100 (100)
                      ++|
T Consensus        82 ~~i   84 (378)
T PRK07682         82 DEI   84 (378)
T ss_pred             CcE
Confidence            444

>PRK05957 aspartate aminotransferase; Provisional

Probab=99.13  E-value=4.3e-10  Score=79.86  Aligned_cols=90  Identities=20%  Similarity=0.234  Sum_probs=72.0

Q ss_pred             CCCChhhcccchhHHHHHHHhhc-CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782            8 FALPPRFEASVYSVWVEFIQLSL-DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus         8 ~~~s~r~~~~~~~~~~~~~~~~~-~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      +++++|+.....+.+..+....+ ..++++|+.|.|++ +||+.+.+++.+.+...  ....|++..|.++||+++++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~-~~~~~~~~a~~~~~~~~--~~~~Y~~~~G~~~lr~~~~~~l   78 (389)
T PRK05957          2 TQFTSRMDAVQSPIIPVVGQLIRENPGTISLGQGVVSY-PPPPEAIEALNNFLANP--ENHKYQAVQGIPPLLEAITQKL   78 (389)
T ss_pred             chhhHHHHhcCCcHHHHHHHHHHhCCCeEEccCCCCCC-CCCHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHHHH
Confidence            35688888888888876666543 35789999999999 88899999998887644  3468999999999999999999


Q ss_pred             hhhhCCCCCCCCCC
Q psy782           87 SSLIERPLLPHQLV  100 (100)
Q Consensus        87 ~~~~g~~~~~~~eI  100 (100)
                      ++.+|+.++++++|
T Consensus        79 ~~~~g~~~~~~~~i   92 (389)
T PRK05957         79 QQDNGIELNNEQAI   92 (389)
T ss_pred             HHHhCCCCCCCCeE
Confidence            98889887733243

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=99.13  E-value=4.1e-10  Score=79.13  Aligned_cols=86  Identities=20%  Similarity=0.232  Sum_probs=68.8

Q ss_pred             CCCChhhcccchhHHHHHHHhh--cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHH
Q psy782            8 FALPPRFEASVYSVWVEFIQLS--LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKL   85 (100)
Q Consensus         8 ~~~s~r~~~~~~~~~~~~~~~~--~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~   85 (100)
                      |.++.|+.......+..+...+  ...++|+|+.|+|++ ++++.+.+++.+...     ..+|+++.|.++||++||++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~-~~~~~~~~~~~~~~~-----~~~Y~~~~G~~~lr~~ia~~   74 (364)
T PRK07865          1 MPVSARLPDFPWDTLAPAKATAAAHPDGIVDLSVGTPVD-PVPPVIQEALAAAAD-----APGYPTTAGTPELREAIVGW   74 (364)
T ss_pred             CCccccCCCccHHHHHHHHHHHHhcCCCEEEcCCCCCCC-CCCHHHHHHHHHHHh-----hCCCCCccCCHHHHHHHHHH
Confidence            4578888888887777765543  234689999999988 767888888876542     34899999999999999999


Q ss_pred             HhhhhCCC-CCCCCCC
Q psy782           86 YSSLIERP-LLPHQLV  100 (100)
Q Consensus        86 ~~~~~g~~-~~~~~eI  100 (100)
                      +.+.+|++ ++++ +|
T Consensus        75 l~~~~~~~~~~~~-~I   89 (364)
T PRK07865         75 LARRRGVTGLDPA-AV   89 (364)
T ss_pred             HHHHcCCCCCCcc-cE
Confidence            99988987 8887 54

>PLN02187 rooty/superroot1

Probab=99.10  E-value=5.1e-10  Score=81.38  Aligned_cols=65  Identities=22%  Similarity=0.283  Sum_probs=56.3

Q ss_pred             CCceecCCCCCC----CCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           32 HKPLNLGQGFPD----YESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        32 ~~~i~l~~G~P~----~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      .++|+|++|+|+    + .+|+++.+++.++++.+  ..++|++..|.++||++||+++.+.+|+.++++ +|
T Consensus        66 ~~vi~l~~Gdp~~~p~~-~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~-~I  134 (462)
T PLN02187         66 KTILPLGHGDPSVYPCF-RTCIEAEDAVVDVLRSG--KGNSYGPGAGILPARRAVADYMNRDLPHKLTPE-DI  134 (462)
T ss_pred             CCeEECCCCCCCCCCCC-CCCHHHHHHHHHHHhCC--CCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcc-cE
Confidence            479999999998    5 56688999999988765  357899999999999999999998889889988 54

>PRK08636 aspartate aminotransferase; Provisional

Probab=99.08  E-value=9e-10  Score=78.53  Aligned_cols=86  Identities=21%  Similarity=0.298  Sum_probs=64.2

Q ss_pred             hhhcccchhHHHHHHHhhc-----CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           12 PRFEASVYSVWVEFIQLSL-----DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        12 ~r~~~~~~~~~~~~~~~~~-----~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      +++..+....+..+.+.+.     ..++++|+.|.|+. .+|..+.+++.+.+...  ..++|++..|.++||++||+++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~p~~-~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lR~~ia~~l   84 (403)
T PRK08636          8 NKIKRLPKYVFAEVNELKMAARRAGEDIIDFSMGNPDG-PTPQHIIDKLCESAQKP--KTHGYSVSKGIYKLRLAICNWY   84 (403)
T ss_pred             HHHHhCCccHHHHHHHHHHHHHhcCCCEEEcCCcCCCC-CCCHHHHHHHHHHhcCC--ccCCCCCCCCCHHHHHHHHHHH
Confidence            4455556666655555432     35789999999998 66776777776665443  3689999999999999999999


Q ss_pred             hhhhCCCCCCCCCC
Q psy782           87 SSLIERPLLPHQLV  100 (100)
Q Consensus        87 ~~~~g~~~~~~~eI  100 (100)
                      ++.+|+.++++++|
T Consensus        85 ~~~~~~~~~~~~~I   98 (403)
T PRK08636         85 KRKYNVDLDPETEV   98 (403)
T ss_pred             HHHhCCCCCCCCeE
Confidence            98889988886333

>PRK09265 aminotransferase AlaT; Validated

Probab=99.07  E-value=5.8e-10  Score=79.47  Aligned_cols=91  Identities=16%  Similarity=0.185  Sum_probs=66.0

Q ss_pred             ccCCCCChhhcccchhHHHHHHHhhc-----CCCceecCCCCCCC-C-CchHHHHHHHHHHHhcCCcccCCCCCCCCCHH
Q psy782            5 ASKFALPPRFEASVYSVWVEFIQLSL-----DHKPLNLGQGFPDY-E-SAPSHVSKGLADAATGENKLLNQYTRGFGHPR   77 (100)
Q Consensus         5 m~~~~~s~r~~~~~~~~~~~~~~~~~-----~~~~i~l~~G~P~~-~-~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~   77 (100)
                      |+.+..++++..+..+.+..+.+.++     ..++|+|+.|+|+. + ++++.+.+++.+.+..    ..+|+++.|.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~----~~~Y~~~~G~~~   76 (404)
T PRK09265          1 MKPIEKSSKLENVCYDIRGPVLKEAKRLEEEGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPT----AQGYSDSKGLFS   76 (404)
T ss_pred             CCccchhHHHHhcCcchhHHHHHHHHHHHHcCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhc----CCCCCCCCCcHH
Confidence            44456677777777776665555332     34789999999953 1 4677888887776542    468999999999


Q ss_pred             HHHHHHHHHhhhhCCCCCCCCCC
Q psy782           78 IVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        78 LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      ||++||+++.+.++..++++ +|
T Consensus        77 lr~~ia~~~~~~~~~~~~~~-~i   98 (404)
T PRK09265         77 ARKAIMQYYQQKGIPDVDVD-DI   98 (404)
T ss_pred             HHHHHHHHHhccCCCCCCcc-cE
Confidence            99999999987544467777 54

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=99.06  E-value=4.9e-10  Score=80.76  Aligned_cols=66  Identities=23%  Similarity=0.273  Sum_probs=56.6

Q ss_pred             CCCceecCCCCCC----CCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           31 DHKPLNLGQGFPD----YESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        31 ~~~~i~l~~G~P~----~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      ..++|+|++|+|+    + .+|+++.+++.++++.+  ..++|++..|.++||++||+++.+.+|+.++++ +|
T Consensus        51 ~~~~i~l~~G~P~~~~~~-~~~~~~~~a~~~al~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~-~v  120 (430)
T PLN00145         51 PRPVLPLGHGDPSAFPCF-RTAPEAEDAVAAALRSG--KYNSYSTCVGLLPARRAIAEYLSRDLPYELSTD-DI  120 (430)
T ss_pred             CCCeeeCCCCCCCCCCCC-CCCHHHHHHHHHHHHcC--cCCCCCCCccCHHHHHHHHHHHhhccCCCCChh-hE
Confidence            3479999999996    5 67789999999988775  356899999999999999999988889988887 54

>PRK05839 hypothetical protein; Provisional

Probab=99.06  E-value=9.9e-10  Score=77.68  Aligned_cols=63  Identities=24%  Similarity=0.416  Sum_probs=54.7

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      .++|+|+.|+|++ .+++.+.+++.+...    ..+.|+++.|.++||++||+++++++|++++++ +|
T Consensus        24 ~~~i~l~~~~p~~-~~~~~~~~a~~~~~~----~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~-~I   86 (374)
T PRK05839         24 YKGLDLTIGEPQF-ETPKFIQDALKNNAH----LLNKYPKSAGEESLREAQRGFFKRRFKIELKEN-EL   86 (374)
T ss_pred             CCeEEcCCCCCCC-CCCHHHHHHHHHHhh----ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcc-eE
Confidence            3799999999999 788888888887653    267899999999999999999999889988887 54

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=99.06  E-value=8.1e-10  Score=78.90  Aligned_cols=67  Identities=16%  Similarity=0.118  Sum_probs=57.0

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCC--cccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGEN--KLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~--~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      .++++|+.|+|++ .+++.+.+++.+++.+..  ....+|++..|.++||++||+++.+.+|+.++++ +|
T Consensus        34 ~~~i~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~-~I  102 (409)
T PRK07590         34 AKIIRLGIGDVTQ-PLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISAD-EI  102 (409)
T ss_pred             CceEEecCcCCCC-CCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChh-hE
Confidence            4689999999999 888889999988887521  1357899999999999999999988889999987 64

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=99.05  E-value=1e-09  Score=78.35  Aligned_cols=70  Identities=20%  Similarity=0.254  Sum_probs=55.7

Q ss_pred             cCCCceecCCCCCCCC-CchHHHHHHHHHHHhcCC--cccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           30 LDHKPLNLGQGFPDYE-SAPSHVSKGLADAATGEN--KLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        30 ~~~~~i~l~~G~P~~~-~pp~~l~~a~~~~~~~~~--~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      ...++|+|+.|.|+.. ++.+.+.+++.+++....  ...++|++..|.++||++||+++++.+|+.++++ +|
T Consensus        28 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~-~I  100 (416)
T PRK09440         28 RTPGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQ-NI  100 (416)
T ss_pred             cCCCceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChh-hE
Confidence            3467899999999862 234788888888776531  2346899999999999999999998889999887 55

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=99.04  E-value=8.2e-10  Score=78.53  Aligned_cols=81  Identities=21%  Similarity=0.157  Sum_probs=59.2

Q ss_pred             hcccchhHHHHHHHhhc---CCCceecCCCC---CCCCCch--HHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHH
Q psy782           14 FEASVYSVWVEFIQLSL---DHKPLNLGQGF---PDYESAP--SHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKL   85 (100)
Q Consensus        14 ~~~~~~~~~~~~~~~~~---~~~~i~l~~G~---P~~~~pp--~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~   85 (100)
                      +..+..+.+..+.....   ..++|+|++|.   |++ .+|  +.+.+++.++++..  ...+|++..|.++||++||++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~-~~p~~~~l~~a~~~~~~~~--~~~~Y~~~~G~~~lR~aia~~   81 (396)
T PRK09257          5 LEAAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQG-RTPVLRAVKKAEARLLETE--TTKNYLPIEGLAAYRQAVQEL   81 (396)
T ss_pred             CCCCCCChHHHHHHHHhhCCCcCcEecceeeEECCCC-CEeccHHHHHHHHHhcccc--cCCCcCCCCCCHHHHHHHHHH
Confidence            44555556655554333   35799999996   444 344  88999998887654  356899999999999999999


Q ss_pred             HhhhhCCCCCCC
Q psy782           86 YSSLIERPLLPH   97 (100)
Q Consensus        86 ~~~~~g~~~~~~   97 (100)
                      +.+.++..++++
T Consensus        82 ~~~~~~~~~~~~   93 (396)
T PRK09257         82 LFGADSPALAAG   93 (396)
T ss_pred             hcCCCCcccccC
Confidence            987655556776

>PLN02231 alanine transaminase

Probab=99.03  E-value=1.4e-09  Score=80.40  Aligned_cols=80  Identities=13%  Similarity=0.123  Sum_probs=62.7

Q ss_pred             cchhHHHHHHHhhcCCCceecCCCCCCCCCchHHHHHHHHHHHhcC-CcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCC
Q psy782           17 SVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGE-NKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLL   95 (100)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~-~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~   95 (100)
                      ...+.++.+..++..+++|+|+.|.|.+  |.+.+.++. +++... +....+|+++.|.++||++||+++.+++|++++
T Consensus       114 ~~~~~~r~v~~~~~~p~~i~~~~~~~~f--p~~~i~~a~-~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~  190 (534)
T PLN02231        114 QPITFFREVLALCDHPSLLDKSETHGLF--SADAIERAW-QILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPAD  190 (534)
T ss_pred             CccHHHHHHHHhccCCccCCCCCccccC--CHHHHHHHH-HHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCC
Confidence            4466777888888888999999888877  446665555 466542 224678999999999999999999988899999


Q ss_pred             CCCCC
Q psy782           96 PHQLV  100 (100)
Q Consensus        96 ~~~eI  100 (100)
                      ++ +|
T Consensus       191 pe-~I  194 (534)
T PLN02231        191 PN-DI  194 (534)
T ss_pred             cc-cE
Confidence            88 65

>PTZ00376 aspartate aminotransferase; Provisional

Probab=99.01  E-value=7.1e-10  Score=79.14  Aligned_cols=84  Identities=18%  Similarity=0.084  Sum_probs=56.3

Q ss_pred             hhcccchhHHHHHHHhhcC---CCceecCCCCC-CCCCch----HHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHH
Q psy782           13 RFEASVYSVWVEFIQLSLD---HKPLNLGQGFP-DYESAP----SHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAK   84 (100)
Q Consensus        13 r~~~~~~~~~~~~~~~~~~---~~~i~l~~G~P-~~~~pp----~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~   84 (100)
                      ++.....+.+..+.+.+..   .++|+|++|.| ++ .++    +.+.+++.+.+...  ..++|+++.|+++||++||+
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~-~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~G~~~lR~aia~   83 (404)
T PTZ00376          7 QVPLGPPDPILGLAAAFKADPSPSKVNLGIGAYRDE-NGKPYVLESVRKAEKIIAEKN--LDKEYLPIEGLQSFIEAAQK   83 (404)
T ss_pred             cCCcCCCChHHHHHHHHhhcCCcccEecccceeECC-CCCEehhhHHHHHHHHhcccc--CCCCCCCCCCCHHHHHHHHH
Confidence            3444555556555554432   57899999997 45 444    44555544433322  35899999999999999999


Q ss_pred             HHhhhhCCCCCCCCCC
Q psy782           85 LYSSLIERPLLPHQLV  100 (100)
Q Consensus        85 ~~~~~~g~~~~~~~eI  100 (100)
                      ++...++..++++ +|
T Consensus        84 ~~~~~~~~~~~~~-~v   98 (404)
T PTZ00376         84 LLFGEASYALAEK-RI   98 (404)
T ss_pred             HhcCCCccccccC-eE
Confidence            9977655667776 54

>PRK07568 aspartate aminotransferase; Provisional

Probab=98.98  E-value=2.9e-09  Score=75.45  Aligned_cols=85  Identities=20%  Similarity=0.268  Sum_probs=66.4

Q ss_pred             CCChhhcccchhHHHHHHHhhc-----CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHH
Q psy782            9 ALPPRFEASVYSVWVEFIQLSL-----DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIA   83 (100)
Q Consensus         9 ~~s~r~~~~~~~~~~~~~~~~~-----~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia   83 (100)
                      +++.++..+..+.++.+.....     ..++|+|+.|.|++ .+|+.+.+++.+... .   ..+|++..|.++||++||
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~-~~~~~~~~a~~~~~~-~---~~~Y~~~~g~~~lr~~ia   76 (397)
T PRK07568          2 KISKRVLNMPASPIRKLVPYADEAKKRGIKVYHLNIGQPDI-KTPEVFFEAIKNYDE-E---VLAYSHSQGIPELREAFA   76 (397)
T ss_pred             chhhHhhhCCcchHHHHHHHHHHHHhhCCCEEEecCCCCCC-CCCHHHHHHHHHHhc-C---CcCcCCCCCCHHHHHHHH
Confidence            3577777777777777765432     24689999999998 778888888877643 2   578999999999999999


Q ss_pred             HHHhhhhCCCCCCCCCC
Q psy782           84 KLYSSLIERPLLPHQLV  100 (100)
Q Consensus        84 ~~~~~~~g~~~~~~~eI  100 (100)
                      +++.. +|+.++++ +|
T Consensus        77 ~~~~~-~~~~~~~~-~i   91 (397)
T PRK07568         77 KYYKK-WGIDVEPD-EI   91 (397)
T ss_pred             HHHHH-hCCCCCcc-eE
Confidence            99985 68888877 54

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=98.94  E-value=4.1e-09  Score=73.82  Aligned_cols=61  Identities=26%  Similarity=0.456  Sum_probs=52.8

Q ss_pred             ceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCCCC
Q psy782           34 PLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQL   99 (100)
Q Consensus        34 ~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~e   99 (100)
                      +++|+.|+|++ .+++.+.+++.+... .   ..+|+++.|.++||++|++++.+.+|+.++++++
T Consensus         2 ~~~~~~g~p~~-~~~~~~~~~~~~~~~-~---~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~   62 (350)
T TIGR03537         2 LFDFGTGDPKE-PTPPFIRKALIDAVP-E---VSQYPSALGTKALREAISGWFERRFGVKLDPDAQ   62 (350)
T ss_pred             eEeccCCCCCC-CCCHHHHHHHHHHHh-c---cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc
Confidence            68999999999 878889999988753 2   6789999999999999999999888998888633

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PRK08175 aminotransferase; Validated

Probab=98.93  E-value=7.7e-09  Score=73.53  Aligned_cols=64  Identities=23%  Similarity=0.439  Sum_probs=53.7

Q ss_pred             CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCC
Q psy782           31 DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        31 ~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~   97 (100)
                      ..++++|+.|.|+. .+|+.+.+++.+.+...  ..++|+++.|.++||++||+++.+.+|+.++++
T Consensus        28 ~~~~i~l~~g~p~~-~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~   91 (395)
T PRK08175         28 GEDIIDFSMGNPDG-PTPPHIVEKLCEVAQRP--DTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPE   91 (395)
T ss_pred             CCCeEEcCCCCCCC-CCCHHHHHHHHHHHhCC--CcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Confidence            35789999999999 66777777777766543  368899999999999999999998889988876

>PRK06207 aspartate aminotransferase; Provisional

Probab=98.90  E-value=6.7e-09  Score=74.26  Aligned_cols=65  Identities=14%  Similarity=0.192  Sum_probs=54.0

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCC-CCCC
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLP-HQLV  100 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~-~~eI  100 (100)
                      ++|+|+.|.|++..|++.+.+++.+++...  ...+|++..|.++||++||+++++.+|+.+++ + +|
T Consensus        40 ~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~-~I  105 (405)
T PRK06207         40 RPVDFSHGDVDAHEPTPGAFELFSAGVERG--GVQAYTEYRGDADIRELLAARLAAFTGAPVDAAD-EL  105 (405)
T ss_pred             CceecCCcCCCCCCCCHHHHHHHHHHHhcC--CCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-CE
Confidence            689999999995256678888888887654  35789999999999999999999988988887 5 54

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=98.90  E-value=1e-08  Score=72.02  Aligned_cols=63  Identities=27%  Similarity=0.379  Sum_probs=53.2

Q ss_pred             CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCC-CCCCCCC
Q psy782           31 DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERP-LLPHQLV  100 (100)
Q Consensus        31 ~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~-~~~~~eI  100 (100)
                      ..++|+|+.|+|++ ++++.+.+++.++..     ..+|+++.|.++||++|++++++.+|+. ++++ +|
T Consensus        20 ~~~~i~l~~~~p~~-~~~~~~~~~~~~~~~-----~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~-~I   83 (357)
T TIGR03539        20 PDGIVDLSVGTPVD-PVPPLIRAALAAAAD-----APGYPQTWGTPELREAIVDWLERRRGVPGLDPT-AV   83 (357)
T ss_pred             CCCeEEccCCCCCC-CCCHHHHHHHHHHHh-----hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcC-eE
Confidence            34689999999988 777888888877542     4679999999999999999999988987 8887 54

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK06836 aspartate aminotransferase; Provisional

Probab=98.89  E-value=1.4e-08  Score=72.22  Aligned_cols=67  Identities=24%  Similarity=0.391  Sum_probs=56.9

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      .++++|+.|.|++ ++++.+.+++.+.++.......+|++..|+++||++||+++.+.++..++++ +|
T Consensus        33 ~~~~~l~~g~p~~-~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i   99 (394)
T PRK06836         33 DNVFDFSLGNPSV-PPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTAD-HI   99 (394)
T ss_pred             CCeEEecCcCCCC-CCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcC-cE
Confidence            4689999999998 8889999999988875432357899999999999999999998888888887 54

>PRK06290 aspartate aminotransferase; Provisional

Probab=98.83  E-value=3.1e-08  Score=71.09  Aligned_cols=64  Identities=22%  Similarity=0.252  Sum_probs=53.1

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCC-CCCCCCC
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERP-LLPHQLV  100 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~-~~~~~eI  100 (100)
                      ++|+|++|+|++ .+++.+.+++.+.+...  ....|++ .|.++||++||+++++.+|+. ++++++|
T Consensus        45 ~~i~L~~g~p~~-~~~~~~~~~l~~~~~~~--~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I  109 (410)
T PRK06290         45 ELIDMGVGEPDE-MADESVVEVLCEEAKKP--ENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEV  109 (410)
T ss_pred             CeEEcCCCCCCC-CCCHHHHHHHHHHHhCC--CCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceE
Confidence            589999999999 78888899888876543  2567975 899999999999999888988 8886344

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=98.79  E-value=1.2e-08  Score=71.94  Aligned_cols=65  Identities=17%  Similarity=0.180  Sum_probs=54.4

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      ..|+|+.|+|++ .||+.+.+++.+++.+.....+.|+. .|.++||++||+|+++.+|+.++++ +|
T Consensus        27 ~~i~l~~~~~~~-~~~~~~~~al~~~l~~~~~~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~-~I   91 (368)
T PRK03317         27 VPVRLNTNENPY-PPSPALVADIAEAVAEAAAGLNRYPD-RDAVALRADLAAYLTAQTGVGLTVE-NV   91 (368)
T ss_pred             ceeEecCCCCCC-CCCHHHHHHHHHHHhhhhhhhccCCC-CchHHHHHHHHHHhhhhccCCCChh-hE
Confidence            469999999999 89999999999887653223678964 6999999999999999889988887 54

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=98.75  E-value=3e-08  Score=72.23  Aligned_cols=68  Identities=19%  Similarity=0.212  Sum_probs=59.5

Q ss_pred             CCceecCCCCCCCC-CchHHHHHHHHHHHhcCCcc-cCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           32 HKPLNLGQGFPDYE-SAPSHVSKGLADAATGENKL-LNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        32 ~~~i~l~~G~P~~~-~pp~~l~~a~~~~~~~~~~~-~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      ..+++|+.|.|+.+ +|-+.+.+++.++++..... ..+|+++.|.++||++|++++....|+.++++ +|
T Consensus        89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~-~I  158 (459)
T COG1167          89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPE-QI  158 (459)
T ss_pred             CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcC-eE
Confidence            56899999999888 77899999999998765444 68999999999999999999996679999998 65

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=98.75  E-value=4.5e-08  Score=69.84  Aligned_cols=77  Identities=17%  Similarity=0.183  Sum_probs=59.5

Q ss_pred             hhHHHHHHHhh-----cCCCceecCCCCCC--CC-CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhh
Q psy782           19 YSVWVEFIQLS-----LDHKPLNLGQGFPD--YE-SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLI   90 (100)
Q Consensus        19 ~~~~~~~~~~~-----~~~~~i~l~~G~P~--~~-~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~   90 (100)
                      .+.++++....     .+.++|+|++|.|+  ++ +|++.+.+++.+.+...  ...+|++..|.++||++||+++...+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~   90 (403)
T TIGR01265        13 VNPIRAIVDNLKVKPNPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSG--KFNGYAPSVGALAAREAVAEYLSSDL   90 (403)
T ss_pred             HHHHHHHHHHHHHHHhcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHHhhc
Confidence            44565655532     23579999999986  22 67789999999888654  24689999999999999999998777


Q ss_pred             CCCCCCC
Q psy782           91 ERPLLPH   97 (100)
Q Consensus        91 g~~~~~~   97 (100)
                      |+.++++
T Consensus        91 ~~~~~~~   97 (403)
T TIGR01265        91 PGKLTAD   97 (403)
T ss_pred             CCCCCHH
Confidence            8777766

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=98.73  E-value=5.8e-08  Score=69.14  Aligned_cols=62  Identities=21%  Similarity=0.322  Sum_probs=51.9

Q ss_pred             CCceecCCCCCC----CCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCC
Q psy782           32 HKPLNLGQGFPD----YESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        32 ~~~i~l~~G~P~----~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~   97 (100)
                      .++|+|++|+|+    + +|++.+.+++.+++...  ..++|++..|.++||++||+++.+. |..++++
T Consensus        31 ~~~i~l~~g~p~~~~~~-~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~aia~~~~~~-~~~~~~~   96 (401)
T TIGR01264        31 KPMIKLSIGDPTVFGNL-PTDPEVMQAMKDSLDSG--KYNGYAPTVGALSAREAIASYYHNP-DGPIEAD   96 (401)
T ss_pred             CCeeecCCCCCCCcCCC-CCCHHHHHHHHHHHhcc--CCCCCCCCCCCHHHHHHHHHHHhhc-CCCCCHH
Confidence            468999999996    5 77799999999888764  3568999999999999999999874 6667766

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>PLN02994 1-aminocyclopropane-1-carboxylate synthase

Probab=98.66  E-value=2.3e-08  Score=63.28  Aligned_cols=57  Identities=11%  Similarity=0.070  Sum_probs=42.1

Q ss_pred             ceecCCCC---CCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhC--CCCCCCCCC
Q psy782           34 PLNLGQGF---PDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIE--RPLLPHQLV  100 (100)
Q Consensus        34 ~i~l~~G~---P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g--~~~~~~~eI  100 (100)
                      +|.+.+|+   |++ .+|+.+.+++.+.        ..|++..|.++||++||+|+.+.+|  +.++++ +|
T Consensus        59 li~~~i~~~p~~d~-~~~~~i~~~~~~~--------a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd-~I  120 (153)
T PLN02994         59 LIEEWIEENPHADI-CTAEGTIDSFKDI--------ALFQDYHGLANFRKAIANFMAEARGGRVKFDAD-MI  120 (153)
T ss_pred             HHHHHHhCCCcccc-CCcHHHHHHHHHH--------hcCCCCCCcHHHHHHHHHHHHHHhCCCCccchh-he
Confidence            34444555   667 7776666655542        2399999999999999999999888  678887 54

>PLN02397 aspartate transaminase

Probab=98.65  E-value=1.2e-07  Score=68.40  Aligned_cols=76  Identities=21%  Similarity=0.099  Sum_probs=52.5

Q ss_pred             hcccchhHHHHHHHhhc---CCCceecCCCC-CCCC-Cch--HHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           14 FEASVYSVWVEFIQLSL---DHKPLNLGQGF-PDYE-SAP--SHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        14 ~~~~~~~~~~~~~~~~~---~~~~i~l~~G~-P~~~-~pp--~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      +.....+.+..+.+..+   ....++|+.|. |+++ +|.  +.+.++...++..+  ...+|++..|+++||++||+++
T Consensus        27 ~~~~~~~~i~~~~~~~~~~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~--~~~~Y~~~~G~~~LR~aia~~~  104 (423)
T PLN02397         27 VEPAPPDPILGVTEAFLADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGS--RNKEYLPIEGLAEFNKLSAKLA  104 (423)
T ss_pred             CCcCCCChHHHHHHHHhhCCCcceEecccceeeCCCCCcccchHHHHHHHHhhccC--CCCCCCCcCCCHHHHHHHHHHH
Confidence            44455556666665542   34679999995 7874 332  56777766655333  3558999999999999999999


Q ss_pred             hhhhC
Q psy782           87 SSLIE   91 (100)
Q Consensus        87 ~~~~g   91 (100)
                      ...++
T Consensus       105 ~~~~~  109 (423)
T PLN02397        105 YGADS  109 (423)
T ss_pred             cCCCC
Confidence            76543

>KOG0259|consensus

Probab=98.63  E-value=1.2e-07  Score=67.28  Aligned_cols=65  Identities=22%  Similarity=0.226  Sum_probs=54.8

Q ss_pred             CceecCCCCCCCC---CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           33 KPLNLGQGFPDYE---SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        33 ~~i~l~~G~P~~~---~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      .+|+|+.|+|..-   .+.++..+|+.++++.+  ..++|+|+.|++.-|+|||+|+.+...-.++++ ||
T Consensus        62 ~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sg--k~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~-DV  129 (447)
T KOG0259|consen   62 PILPLGHGDPSVYPCFRTSQEAEQAVVDALRSG--KGNGYAPSVGILPARRAVAEYLNRDLPNKLTAD-DV  129 (447)
T ss_pred             eeccCCCCCCCccccccCCHHHHHHHHHHHhcC--CCCCcCCccccHHHHHHHHHHhhcCCCCccCcC-ce
Confidence            6899999998652   34488899999999988  589999999999999999999877666667777 54

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=98.61  E-value=7.5e-08  Score=68.10  Aligned_cols=64  Identities=22%  Similarity=0.189  Sum_probs=51.8

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhh--CCCCCCCCCC
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLI--ERPLLPHQLV  100 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~--g~~~~~~~eI  100 (100)
                      .+++|+.|+|++ .||+.+.+++.+++.... ...+|+. .|.++||++||+++.+.+  |+.++++ +|
T Consensus        29 ~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~Y~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~-~I   94 (374)
T PRK02610         29 QLDRLDTNEFPY-DLPPDLKQKLAWLYQQGI-ESNRYPD-GGHEALKQAIAEYVNESAAGSSQITPA-NI   94 (374)
T ss_pred             ceeEecCCCCCC-CCCHHHHHHHHHHHhhcc-cccCCCC-CchHHHHHHHHHHhCccccccCCCCHH-HE
Confidence            489999999999 888999999998876631 1357964 799999999999998876  5667776 54

>PRK07324 transaminase; Validated

Probab=98.58  E-value=3.1e-08  Score=70.11  Aligned_cols=52  Identities=17%  Similarity=0.051  Sum_probs=45.8

Q ss_pred             CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHh
Q psy782           31 DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus        31 ~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   87 (100)
                      ..++++|++|+|++ ++|+.+ +++.+++...   ..+|++..|.++||++||+++.
T Consensus        25 ~~~~~~~~~~e~~~-~~~~~~-~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~   76 (373)
T PRK07324         25 ESCIDSLTLEELLA-LAGKNP-EAFYQELGQK---KLTYGWIEGSPEFKEAVASLYQ   76 (373)
T ss_pred             cCCCCCCcHHHHHh-ccCcch-HHHHHHHhcC---CccCCCCCCCHHHHHHHHHHhc
Confidence            34799999999999 888888 8888888776   6799999999999999999884

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=98.53  E-value=1.1e-07  Score=69.37  Aligned_cols=76  Identities=14%  Similarity=0.030  Sum_probs=57.5

Q ss_pred             ChhhcccchhHHHHHHHh-----hcCCCceecCCCCC--CCCCchH---HHHHHHHHHHhcCCcccCCCCCCCCCHHHHH
Q psy782           11 PPRFEASVYSVWVEFIQL-----SLDHKPLNLGQGFP--DYESAPS---HVSKGLADAATGENKLLNQYTRGFGHPRIVQ   80 (100)
Q Consensus        11 s~r~~~~~~~~~~~~~~~-----~~~~~~i~l~~G~P--~~~~pp~---~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~   80 (100)
                      .-|++.+.++.+..+.+.     .+..++|+|++|+|  |+ .+|.   ++.+++.+++..+   .++|++..|.++||+
T Consensus        10 ~~r~~~v~~~~~~~~~~~~~~l~~~g~~~~~L~~g~p~~D~-~tds~t~a~~~a~~~a~~~g---~~~Y~~~~g~~~Lre   85 (460)
T PRK13238         10 PFRIKMVEPIRLTTREERERALAEAGYNPFLLKSEDVFIDL-LTDSGTGAMSDRQWAAMMRG---DEAYAGSRSYYRLED   85 (460)
T ss_pred             ceeeceeccccccCHHHHHHHHHHcCCCEEeCCCCCCCCCC-CCCCCchhhhHHHHHHHHhC---CcccCCCCCHHHHHH
Confidence            345566666555444332     23468999999999  56 7765   6889998888776   678999999999999


Q ss_pred             HHHHHHhhhh
Q psy782           81 AIAKLYSSLI   90 (100)
Q Consensus        81 aia~~~~~~~   90 (100)
                      +|++++...+
T Consensus        86 aia~~~~~~~   95 (460)
T PRK13238         86 AVKDIFGYPY   95 (460)
T ss_pred             HHHHHhCCCc
Confidence            9999997653

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=98.49  E-value=2.8e-07  Score=64.47  Aligned_cols=59  Identities=10%  Similarity=0.119  Sum_probs=47.4

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCC
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~   97 (100)
                      .++|+|++|+|++ .||+.+.+++.+.+..+  ..+.|++. |.++||++||+++.+. +  ++++
T Consensus        19 ~~~i~l~~~~~~~-~~p~~~~~~~~~~~~~~--~~~~Y~~~-~~~~Lr~aia~~~~~~-~--~~~~   77 (335)
T PRK14808         19 RDRTYLALNENPF-PFPEDLVDEVFRRLNSD--TLRIYYDS-PDEELIEKILSYLDTD-F--LSKN   77 (335)
T ss_pred             CceeEecCCCCCC-CCCHHHHHHHHHHhhhh--hhhcCCCC-ChHHHHHHHHHHhCCC-C--CCcc
Confidence            4789999999999 88999999998877654  23457654 9999999999999775 3  4565

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=98.47  E-value=8.1e-07  Score=63.41  Aligned_cols=62  Identities=21%  Similarity=0.229  Sum_probs=49.1

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCC--cccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCC
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGEN--KLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~--~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~   97 (100)
                      .++|+|+.|+|++ .+++.+.+++.+++++..  ....+|++..|.++||++||+++.+. +  +++|
T Consensus        33 ~~~i~l~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~-~--~~~d   96 (402)
T TIGR03542        33 ADIIRLGIGDTTQ-PLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG-R--IDPE   96 (402)
T ss_pred             CCeEEcCCCCCCC-CCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc-C--CCHH
Confidence            4689999999999 888889999888887531  12467999999999999999987442 3  5565

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=98.45  E-value=1.6e-07  Score=65.69  Aligned_cols=62  Identities=27%  Similarity=0.343  Sum_probs=49.5

Q ss_pred             CceecCCCCCCCCC----chHHHHHHHHH-HHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCC
Q psy782           33 KPLNLGQGFPDYES----APSHVSKGLAD-AATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        33 ~~i~l~~G~P~~~~----pp~~l~~a~~~-~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~   97 (100)
                      ++|+|+.|.++. .    +++.+.+++.+ .....  ..++|++..|.++||++||+++.+..|+.++++
T Consensus         2 ~~I~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~   68 (363)
T PF00155_consen    2 DVINLGSNAPLL-LSQNPPPPAAIKAAIRGAATSS--SFLGYPPPQGYPELREAIADFLGRRYGVPVDPE   68 (363)
T ss_dssp             TEEESSSSSTSS-TTSSHHHHHHHHHHHHHHHHHT--GCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGG
T ss_pred             CEEEEECCCCCC-cccccchHHHHHHHHHHhhccc--ccccCCCchhhHHHHHHHHHHhhhccCcccccc
Confidence            589999999988 5    56666666665 33322  378999999999999999999997778877765

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>PRK09275 aspartate aminotransferase; Provisional

Probab=98.42  E-value=4.6e-07  Score=67.17  Aligned_cols=50  Identities=12%  Similarity=0.025  Sum_probs=41.1

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhh
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSL   89 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~   89 (100)
                      ++|+|++|+|++ .||+.+.+++. .+. +   . +|+++.|.++||++|++++.++
T Consensus       101 ~~i~l~~g~p~~-~~~~~v~e~~~-~~~-~---~-~Y~~~~g~~~lreaia~~~~~~  150 (527)
T PRK09275        101 DAVSYVRDQLGF-DADEFVYELVD-GII-G---D-NYPVPDRMLKHTEKIVKDYLRQ  150 (527)
T ss_pred             HHHhhcCCCCCC-CCCHHHHHHHH-HHh-c---C-CCCCCCCCHHHHHHHHHHHHHh
Confidence            479999999999 88999988554 443 3   2 4999999999999999977553

>PRK07908 hypothetical protein; Provisional

Probab=98.29  E-value=1.7e-06  Score=60.53  Aligned_cols=51  Identities=18%  Similarity=0.162  Sum_probs=44.8

Q ss_pred             CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           31 DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        31 ~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ..++++|++|.+++ .||+.+.+++.+.+..    ..+|++..|.++||++||+++
T Consensus        21 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~----~~~Y~~~~g~~~lr~aia~~~   71 (349)
T PRK07908         21 GPGLLDFAVNVRHD-TPPEWLRERLAARLGD----LAAYPSTEDERRARAAVAARH   71 (349)
T ss_pred             CCCeEEecCCCCCC-CCCHHHHHHHHHHhhH----hhcCCCccchHHHHHHHHHHh
Confidence            35799999999999 8999999999988753    467999999999999999986

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=98.23  E-value=1.3e-06  Score=60.97  Aligned_cols=50  Identities=24%  Similarity=0.317  Sum_probs=42.8

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      .++|+|+.|.|++ .|++.+.+++.+++.+.   ..+|++. |.++||++||+++
T Consensus        24 ~~~i~l~~~~~~~-~~~~~~~~a~~~~~~~~---~~~y~~~-~~~~lr~aia~~~   73 (353)
T PRK05387         24 AKLIKLNTNENPY-PPSPKVLEAIRAALGDD---LRLYPDP-NADALRQAIAAYY   73 (353)
T ss_pred             cceeeccCCCCCC-CCCHHHHHHHHHHhhhh---hhcCCCC-cHHHHHHHHHHHh
Confidence            4689999999999 87889999999887764   6789655 7799999999997

>PLN02672 methionine S-methyltransferase

Probab=98.18  E-value=7.7e-06  Score=64.90  Aligned_cols=62  Identities=10%  Similarity=0.014  Sum_probs=50.8

Q ss_pred             CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           31 DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        31 ~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      ..++|+|++|+|++ +||+.+.+++.+++...   .  |  ..|++++|++|++++++.+|++++++++|
T Consensus       696 g~~vI~LsinE~d~-ppPp~V~eAi~eal~~~---~--~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~I  757 (1082)
T PLN02672        696 ESSLIHMDVDESFL-PVPSAVKASIFESFVRQ---N--I--SESETDPRPSILQFIKSNYGFPTDSCTEF  757 (1082)
T ss_pred             CCCEEEEeCCCCCC-CCCHHHHHHHHHHHhhc---C--C--CCCChHHHHHHHHHHHHHhCcCCCCCCEE
Confidence            35799999999999 99999999998877543   1  2  45789999999999999899998765343

>PRK06225 aspartate aminotransferase; Provisional

Probab=98.17  E-value=8.4e-06  Score=57.71  Aligned_cols=55  Identities=16%  Similarity=0.179  Sum_probs=47.5

Q ss_pred             hcCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           29 SLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        29 ~~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ....++|+|+.|.+.+ +|++.+.+++.+++...  ...+|++..|.++||++||+++
T Consensus        25 ~~~~~~i~l~~~~~~~-~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~l   79 (380)
T PRK06225         25 FKDKEMIWMGQNTNHL-GPHEEVREAMIRCIEEG--EYCKYPPPEGFPELRELILKDL   79 (380)
T ss_pred             hhcCCeEEccCCCCCC-CCCHHHHHHHHHHHhcC--CCCCCCCCcchHHHHHHHHHhc
Confidence            3456899999999999 88899999999988764  3578999999999999999986

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=98.14  E-value=6.2e-06  Score=57.86  Aligned_cols=52  Identities=15%  Similarity=0.174  Sum_probs=44.7

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHh
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   87 (100)
                      .++|+|+.|+|++ .||+++.+++.+.+...  ...+|++ .|.++||++||+++.
T Consensus        26 ~~~i~l~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~Y~~-~~~~~lr~~ia~~~~   77 (356)
T PRK04870         26 TGMVKLDAMENPY-RLPAELRAELGERLAEV--ALNRYPD-PRAAALKAALRAAMG   77 (356)
T ss_pred             CCceeCcCCCCCC-CCCHHHHHHHHHHhhcc--ccccCCC-CCHHHHHHHHHHHhC
Confidence            4799999999999 89999999999888654  2578987 688999999999984

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=98.12  E-value=6.2e-06  Score=57.93  Aligned_cols=49  Identities=14%  Similarity=0.251  Sum_probs=41.2

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      .++|+|+.|++++ .||+.+.+++.+.+. .   ..+|+ ..|.++||++||+++
T Consensus        30 ~~~i~l~~~~~~~-~~~~~~~~~~~~~~~-~---~~~Y~-~~~~~~lr~~ia~~~   78 (357)
T PRK14809         30 DDLVKLSSNENPH-GPSPAAVEAIREAAE-R---VHSYP-KASHADLTAALADRW   78 (357)
T ss_pred             cceeEecCCCCCC-CCCHHHHHHHHHHHh-h---hhcCC-CCCHHHHHHHHHHHh
Confidence            4799999999999 777788888888765 3   56896 479999999999987

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=98.06  E-value=2.9e-05  Score=54.26  Aligned_cols=69  Identities=17%  Similarity=0.211  Sum_probs=56.1

Q ss_pred             cCCCceecCCCCCCCCCch--HHHHHHHHHHHhcCC--cccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           30 LDHKPLNLGQGFPDYESAP--SHVSKGLADAATGEN--KLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        30 ~~~~~i~l~~G~P~~~~pp--~~l~~a~~~~~~~~~--~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      +.+++|.||.|+|.. .|-  +...+...+.+.++.  ...-.|+.++|...|.+++++.++++||.+++++ +|
T Consensus        28 rt~g~imLggGNPa~-iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~-NI  100 (417)
T COG3977          28 RTPGAIMLGGGNPAR-IPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQ-NI  100 (417)
T ss_pred             cCCCceeeCCCCccc-ChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccc-ee
Confidence            446799999999988 665  567777777776652  2345799999999999999999999999999887 54

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=98.01  E-value=2.2e-05  Score=55.61  Aligned_cols=51  Identities=20%  Similarity=0.176  Sum_probs=42.0

Q ss_pred             cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           30 LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        30 ~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ...++|+|+.|++++ .|++.+.+++.+.+..    ...| |..|.++||++||+++
T Consensus        27 ~~~~~i~l~~nen~~-~~~~~v~~a~~~~~~~----~~~Y-p~~g~~~Lr~aia~~~   77 (366)
T PRK01533         27 GDHSFVKLASNENPF-GCSPRVLDELQKSWLD----HALY-PDGGATTLRQTIANKL   77 (366)
T ss_pred             CCCceEEeCCCCCCC-CCCHHHHHHHHHHHHh----cCcC-CCCCHHHHHHHHHHHh
Confidence            345789999999999 8889999998877644    2357 5679999999999987

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=98.00  E-value=1.5e-05  Score=55.70  Aligned_cols=52  Identities=15%  Similarity=0.286  Sum_probs=42.8

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHh
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   87 (100)
                      .++|+|+.|.|++ .+++.+.+++.+++...  ...+|+ ..|.++||++||+++.
T Consensus        18 ~~~i~l~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~Y~-~~g~~~lr~~ia~~~~   69 (337)
T PRK03967         18 NYRIWLDKNENPF-DLPEELKEEIFEELKRV--PFNRYP-HITSDPLREAIAEFYG   69 (337)
T ss_pred             CceEEecCCCCCC-CCCHHHHHHHHHHhhcC--ccccCC-CCCHHHHHHHHHHHhC
Confidence            3679999999998 78888889888887543  257896 5799999999999883

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=97.96  E-value=5.7e-06  Score=60.51  Aligned_cols=65  Identities=17%  Similarity=0.187  Sum_probs=47.4

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhc---------CCcccCCCCCCCCCHHHHHHHHHHHhhhhCC--CCCCCCCC
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATG---------ENKLLNQYTRGFGHPRIVQAIAKLYSSLIER--PLLPHQLV  100 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~---------~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~--~~~~~~eI  100 (100)
                      ++|+|+.+++.. . .+.+.+.+.+....         .......|++..|.++||++||+++.+.+|.  .++++ +|
T Consensus        39 g~i~L~~~En~l-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~-~I  114 (468)
T PLN02450         39 GIIQMGLAENQL-S-FDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPN-KL  114 (468)
T ss_pred             eeEEeehhHhHh-h-HHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChH-He
Confidence            689999999877 4 47777776654221         0013466999999999999999999887774  46776 44

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=97.95  E-value=2.8e-05  Score=55.10  Aligned_cols=55  Identities=15%  Similarity=0.212  Sum_probs=46.1

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCC-----CCCCHHHHHHHHHHHhhhhCCC
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTR-----GFGHPRIVQAIAKLYSSLIERP   93 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~-----~~G~~~LR~aia~~~~~~~g~~   93 (100)
                      ++++|++|.|++ .+|+.+.++..++  ..   .++|++     ..|.++||+++++++++.+|++
T Consensus        21 ~~~~l~~g~~~~-~~p~~~~~~~~~~--~~---~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~   80 (398)
T cd00613          21 SMSFLGSGTYKH-NPPAVIKRNILEN--EF---YTAYTPYQPEISQGRLQALFELQTMLCELTGMD   80 (398)
T ss_pred             CcccccccccCC-cCcHHHHHHhccc--cC---cccCCCCChhhhhhHHHHHHHHHHHHHHHHCCC
Confidence            569999999999 8888888877765  22   456776     7999999999999999988875

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=97.95  E-value=3.5e-05  Score=54.85  Aligned_cols=60  Identities=17%  Similarity=0.307  Sum_probs=55.7

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCC
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~   97 (100)
                      .++++|.+.+-|| ..|+++.+|+++.++++   .++|+  .+..+|-++|++|++++++..+.++
T Consensus        25 ~DvlPmWVADMDf-~~pp~i~~Al~~rvdhG---vfGY~--~~~~~~~~ai~~w~~~r~~~~i~~e   84 (388)
T COG1168          25 EDVLPMWVADMDF-PTPPEIIEALRERVDHG---VFGYP--YGSDELYAAIAHWFKQRHQWEIKPE   84 (388)
T ss_pred             CCcceeeeecccC-CCCHHHHHHHHHHHhcC---CCCCC--CCCHHHHHHHHHHHHHhcCCCCCcc
Confidence            5899999999999 99999999999999998   89996  7889999999999999999888776

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=97.93  E-value=1.7e-05  Score=55.83  Aligned_cols=49  Identities=16%  Similarity=0.240  Sum_probs=40.8

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      .++|+|+.|.+.+ .||+.+.+++.+.+..    ..+|++. |.++||++||+++
T Consensus        22 ~~~i~l~~~~n~~-~~~~~~~~a~~~~~~~----~~~Y~~~-~~~~Lr~aia~~~   70 (360)
T PRK07392         22 DAILDFSASINPL-GPPESVIAAIQSALSA----LRHYPDP-DYRELRLALAQHH   70 (360)
T ss_pred             ccEEEeCCcCCCC-CCCHHHHHHHHHHHHH----hhcCCCc-CHHHHHHHHHHHh
Confidence            3689999998888 8889999998877653    5679875 5689999999998

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=97.93  E-value=1.3e-05  Score=55.81  Aligned_cols=50  Identities=20%  Similarity=0.358  Sum_probs=41.9

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHh
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   87 (100)
                      .++|+|++|++++ .+|+.+.+++.+++. .   .++|++..| ++||++||+++.
T Consensus        19 ~~~i~l~~~~~~~-~~~~~~~~a~~~~~~-~---~~~y~~~~~-~~lr~~ia~~~~   68 (346)
T TIGR01141        19 KEVIKLNSNENPF-GPPPKAKEALRAEAD-K---LHRYPDPDP-AELKQALADYYG   68 (346)
T ss_pred             CceEEccCCCCCC-CCCHHHHHHHHHhHH-H---hhcCCCCCH-HHHHHHHHHHhC
Confidence            3699999999988 788889999988764 2   467987777 999999999984

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=97.88  E-value=1.9e-05  Score=56.89  Aligned_cols=52  Identities=17%  Similarity=0.118  Sum_probs=42.4

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhh
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSL   89 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~   89 (100)
                      .+++|+.|.|++ .+++.+.+++.+++..    ..+|++..|.++||++|++++.+.
T Consensus        86 ~~i~L~~g~p~~-~~~p~~~~~~~~~~~~----~~~Y~~~~g~~~lr~~ia~~~~~~  137 (431)
T PRK15481         86 PLHDLAGGNPDP-QRLPDLSRYFARLSRT----PRLYGDAPVSPELHAWAARWLRDD  137 (431)
T ss_pred             hhhhhhcCCCCh-hHhHHHHHHHHHhhhh----hhhcCCcCCCHHHHHHHHHHHhhc
Confidence            478999999998 6656688888776543    467999999999999999998653

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=97.77  E-value=4.2e-05  Score=53.83  Aligned_cols=49  Identities=14%  Similarity=0.257  Sum_probs=41.0

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      .++|+|++|+|++ .||+.+.+++.+.+..    ...|++ .|.++||++||+++
T Consensus        20 ~~~i~l~~~~~~~-~~p~~~~~a~~~~~~~----~~~y~~-~~~~~lr~~ia~~~   68 (356)
T PRK08056         20 DQLLDFSANINPL-GMPVSLKRAIIDNLDC----AERYPD-VEYRHLHQALARHH   68 (356)
T ss_pred             hhEEEeccccCCC-CCCHHHHHHHHHHHHh----cccCcC-ccHHHHHHHHHHHh
Confidence            4689999999999 8888999999887754    346875 47999999999986

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=97.72  E-value=7.1e-05  Score=55.67  Aligned_cols=57  Identities=7%  Similarity=-0.024  Sum_probs=39.3

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHH-HHhhhhCCCCCC
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAK-LYSSLIERPLLP   96 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~-~~~~~~g~~~~~   96 (100)
                      ++|+|++|+|++ .|++.+.+ +.+.+. +   . +|+++.|.+++|++|++ ++.+.++....+
T Consensus        95 ~~i~l~~g~p~~-~~~~~~~~-~~~~~~-~---~-~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~  152 (521)
T TIGR03801        95 DIISYVIDQLGF-DPDAFLYE-MCDGII-G---D-NYPVPDRMLPHSEKIVHQYLIQEMCGNKPP  152 (521)
T ss_pred             HHHhhcCCCCCC-CCCHHHHH-HHHHhh-c---C-CCCCCCCCHHHHHHHHHHHHHhhccCCCCC
Confidence            479999999999 76666644 444443 3   2 59888999999999986 445544443333

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=97.71  E-value=0.00011  Score=51.81  Aligned_cols=61  Identities=5%  Similarity=0.018  Sum_probs=46.8

Q ss_pred             CCCceecCCCC-CCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCC
Q psy782           31 DHKPLNLGQGF-PDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIER   92 (100)
Q Consensus        31 ~~~~i~l~~G~-P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~   92 (100)
                      +.++|+|+.|+ |++ .+++.+.+++.+.++........|....|.++||+++++++++.+|.
T Consensus        41 g~~~i~l~~~~~~~~-~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~  102 (397)
T PRK06939         41 GKEVINFCANNYLGL-ANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGT  102 (397)
T ss_pred             CCeEEEeeccCcccc-CCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCC
Confidence            34689999998 688 78889999999988764211223344579999999999999988775

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=97.70  E-value=0.00012  Score=51.64  Aligned_cols=61  Identities=10%  Similarity=0.090  Sum_probs=49.8

Q ss_pred             CCCceecCCCC-CCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCC
Q psy782           31 DHKPLNLGQGF-PDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIER   92 (100)
Q Consensus        31 ~~~~i~l~~G~-P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~   92 (100)
                      +.++|+|+.|. |++ .+++.+.+++.++++........|....|.++||+++++++++.+|.
T Consensus        32 g~~~id~~~~~~~g~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~   93 (385)
T TIGR01825        32 GKEVINLSSNNYLGF-ADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT   93 (385)
T ss_pred             CceEEEeeccCccCC-CCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC
Confidence            45789999997 677 78889999999888754323457889999999999999999987664

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=97.70  E-value=5.4e-05  Score=53.57  Aligned_cols=48  Identities=15%  Similarity=0.198  Sum_probs=40.1

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ..|+|+.|+|++ .+++.+.+++.+.+..    ..+|++. +.++||++||+++
T Consensus        33 ~~~~l~~~~~~~-~~~~~~~~a~~~~~~~----~~~Y~~~-~~~~Lr~~ia~~~   80 (369)
T PRK08153         33 FRARIGANESGF-GPSPSVIAAMREAAAE----IWKYGDP-ENHDLRHALAAHH   80 (369)
T ss_pred             ceeEecCCCCCC-CCCHHHHHHHHHHHHH----hhcCCCC-ccHHHHHHHHHHh
Confidence            457999999999 8888899998887642    4679876 6899999999987

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=97.69  E-value=7.9e-05  Score=52.48  Aligned_cols=48  Identities=13%  Similarity=0.214  Sum_probs=39.7

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ++++|+.|.|.. .+|+.+.+++.+.+..    ..+|++ .|.++||++||+++
T Consensus        20 ~~~~l~~~~~~~-~~p~~~~~a~~~~~~~----~~~Y~~-~~~~~lr~~ia~~~   67 (354)
T PRK06358         20 MILDFSANINPL-GVPESLKQAITENLDK----LVEYPD-PDYLELRKRIASFE   67 (354)
T ss_pred             ceEEecCCCCCC-CCCHHHHHHHHHHHHh----hhcCCC-ccHHHHHHHHHHHh
Confidence            479999999888 7788899998887642    567965 57999999999987

>PRK03321 putative aminotransferase; Provisional

Probab=97.66  E-value=7.8e-05  Score=52.20  Aligned_cols=49  Identities=22%  Similarity=0.384  Sum_probs=41.5

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHh
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   87 (100)
                      ++|+|+.|.|++ .|++.+.+++.+.+..    ...|+ ..|.++||++||+++.
T Consensus        23 ~~i~l~~~~~~~-~~~~~~~~a~~~~~~~----~~~y~-~~g~~~lr~~ia~~~~   71 (352)
T PRK03321         23 GAIKLSSNETPF-GPLPSVRAAIARAAAG----VNRYP-DMGAVELRAALAEHLG   71 (352)
T ss_pred             cceeccCCCCCC-CCCHHHHHHHHHHHHh----cCcCC-CCcHHHHHHHHHHHhC
Confidence            689999999999 7888999999887752    46785 5799999999999974

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=97.64  E-value=0.00016  Score=51.20  Aligned_cols=50  Identities=24%  Similarity=0.230  Sum_probs=41.5

Q ss_pred             CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           31 DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        31 ~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ..++|+|+.|.|.+ .|++.+.+++.+... .   ..+|++..| .+||++||+++
T Consensus        35 ~~~~i~l~~~~~~~-~~~~~~~~al~~~~~-~---~~~Y~~~~g-~~lr~~ia~~~   84 (371)
T PRK05166         35 VPRIAKLGSNENPL-GPSPAVRRAFADIAE-L---LRLYPDPQG-RALREAIAART   84 (371)
T ss_pred             CcceEEcCCCCCCC-CCCHHHHHHHHHHHH-H---hhcCCCCcH-HHHHHHHHHHh
Confidence            34789999999988 888899999887543 2   568999999 49999999986

>PRK09105 putative aminotransferase; Provisional

Probab=97.56  E-value=0.00017  Score=51.16  Aligned_cols=48  Identities=10%  Similarity=-0.033  Sum_probs=39.6

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ++|.|+.|+|++ .||+.+.+++.+.+..    ...|++. +.++||++||+++
T Consensus        44 ~~i~l~~~~~~~-~~~~~~~~a~~~~~~~----~~~Y~~~-~~~~Lr~aia~~~   91 (370)
T PRK09105         44 GAVFLNANECPL-GPSPAARDAAARSAAL----SGRYDLE-LEDDLRTLFAAQE   91 (370)
T ss_pred             CcEEecCCCCCC-CCCHHHHHHHHHHHHH----hcCCCCc-hHHHHHHHHHHHh
Confidence            689999999999 8888999999887654    3468765 4999999999865

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=97.54  E-value=0.00024  Score=49.90  Aligned_cols=50  Identities=12%  Similarity=0.254  Sum_probs=41.3

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ..++|+.|+|++ .+|+.+.+++.+.+...  ..+.|++. +.++||++||+++
T Consensus        23 ~~~~l~~~~~~~-~~p~~~~~a~~~~~~~~--~~~~y~~~-~~~~lr~~ia~~~   72 (351)
T PRK14807         23 YKYKMDANETPF-ELPEEVIKNIQEIVKSS--QVNIYPDP-TAEKLREELARYC   72 (351)
T ss_pred             ceeEccCCCCCC-CCCHHHHHHHHHHhhcC--cccCCCCc-cHHHHHHHHHHHh
Confidence            468999999999 88899999998887653  35779754 5799999999986

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=97.46  E-value=0.0002  Score=52.95  Aligned_cols=67  Identities=13%  Similarity=0.122  Sum_probs=43.8

Q ss_pred             CceecCCCCCCC--CCchHHHHHHHHHHHhc-----CCcccCCCCCCCCCHHHHHHHHHHHhhhhC--CCCCCCCCC
Q psy782           33 KPLNLGQGFPDY--ESAPSHVSKGLADAATG-----ENKLLNQYTRGFGHPRIVQAIAKLYSSLIE--RPLLPHQLV  100 (100)
Q Consensus        33 ~~i~l~~G~P~~--~~pp~~l~~a~~~~~~~-----~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g--~~~~~~~eI  100 (100)
                      ++|+|+..+=.+  +..++.+++.....+..     .......|++..|.++||++||+++.+.+|  +.++|+ +|
T Consensus        47 g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe-~I  122 (496)
T PLN02376         47 GIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPE-RV  122 (496)
T ss_pred             ceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChh-hE
Confidence            689999976433  11134444433321100     112345799999999999999999998878  668887 54

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=97.36  E-value=0.00033  Score=49.90  Aligned_cols=48  Identities=19%  Similarity=0.228  Sum_probs=36.9

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      .++|+|+.|++++ .|++.+.+++.+. .    ..+.|+. .|.++||++||+++
T Consensus        52 ~~~i~l~~n~~p~-~~~~~v~~a~~~~-~----~~~~Yp~-~~~~~lr~~ia~~~   99 (380)
T PLN03026         52 EDIVKLDANENPY-GPPPEVLEALGNM-K----FPYVYPD-PESRRLRAALAEDS   99 (380)
T ss_pred             cceEEccCCCCCC-CCCHHHHHHHHhh-H----hhccCCC-CCHHHHHHHHHHHh
Confidence            4789999999888 7777788877542 1    1356865 57899999999987

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=97.35  E-value=0.00044  Score=48.54  Aligned_cols=48  Identities=17%  Similarity=0.136  Sum_probs=40.2

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ++|+|+.|+|.+ .|++.+.+++.+.+..     ..|.+..|.++||++||+++
T Consensus        30 ~~i~l~~n~~~~-~~~~~v~~a~~~~~~~-----~~~~p~~g~~~lr~~ia~~~   77 (359)
T PRK03158         30 KIVKLASNENPY-GPSPKVKEAIAAHLDE-----LALYPDGYAPELRTKVAKHL   77 (359)
T ss_pred             ceEEecCCCCCC-CCCHHHHHHHHHHHHH-----hhcCCCCcHHHHHHHHHHHh
Confidence            789999999988 7778899998887653     34666789999999999998

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=97.33  E-value=0.0011  Score=46.55  Aligned_cols=50  Identities=18%  Similarity=0.258  Sum_probs=40.5

Q ss_pred             CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           31 DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        31 ~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ..++++|+.|.|++ .|++.+.+++.+.+..    ...|++..| .+||++||+++
T Consensus        31 ~~~~i~l~~~~~~~-~~~~~~~~a~~~~~~~----~~~y~~~~~-~~lr~~ia~~~   80 (367)
T PRK02731         31 IADIIKLASNENPL-GPSPKAIEAIRAAADE----LHRYPDGSG-FELKAALAEKF   80 (367)
T ss_pred             CCceEEecCCCCCC-CCCHHHHHHHHHHHHh----hcCCCCCcH-HHHHHHHHHHh
Confidence            35689999999988 7777888988887653    567976654 79999999987

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=97.24  E-value=0.0008  Score=47.17  Aligned_cols=49  Identities=12%  Similarity=0.266  Sum_probs=39.6

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      .++|+|+.|++++ .|++.+.+++.+.+..    ..+|++..| ++||++||+++
T Consensus        34 ~~~i~l~~~~~~~-~~~~~~~~~~~~~~~~----~~~y~~~~~-~~lr~~ia~~~   82 (361)
T PRK00950         34 ESIIKLGSNENPL-GPSPKAVEAIEKELSK----IHRYPEPDA-PELREALSKYT   82 (361)
T ss_pred             cceEEccCCCCCC-CCCHHHHHHHHHHHHh----hcCCCCCCH-HHHHHHHHHHh
Confidence            3789999999988 7777788888777653    457877655 99999999987

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=97.24  E-value=0.00031  Score=51.24  Aligned_cols=65  Identities=11%  Similarity=0.084  Sum_probs=46.5

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhc------C---CcccCCCCCCCCCHHHHHHHHHHHhhhhC--CCCCCCCCC
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATG------E---NKLLNQYTRGFGHPRIVQAIAKLYSSLIE--RPLLPHQLV  100 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~------~---~~~~~~Y~~~~G~~~LR~aia~~~~~~~g--~~~~~~~eI  100 (100)
                      ++|+||..+ +. ..-+.+.+.+.+....      .   ......|++..|.++||++||+++.+.+|  +.++|+ +|
T Consensus        48 g~i~l~~ae-N~-l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~-~I  123 (447)
T PLN02607         48 GVIQMGLAE-NQ-VSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPD-RI  123 (447)
T ss_pred             ceEEEechh-hh-hhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHH-He
Confidence            589999987 33 4567777777665331      1   11234589999999999999999998777  457776 44

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=97.23  E-value=0.00058  Score=49.80  Aligned_cols=57  Identities=12%  Similarity=-0.046  Sum_probs=47.2

Q ss_pred             cCCCceecCCCCC--CCCCch---HHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhh
Q psy782           30 LDHKPLNLGQGFP--DYESAP---SHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLI   90 (100)
Q Consensus        30 ~~~~~i~l~~G~P--~~~~pp---~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~   90 (100)
                      +..+++.|..|+|  |+ .++   ..+.++...++..+   ..+|++..|.++||++|++++...+
T Consensus         9 ~g~n~~~l~~~~v~iDl-ltds~t~ams~~~~~a~~~g---d~~Y~~~~g~~~Leeaia~~~g~~~   70 (431)
T cd00617           9 AGYNVFLLRSEDVYIDL-LTDSGTGAMSDYQWAAMMLG---DEAYAGSKSFYDLEDAVQDLFGFKH   70 (431)
T ss_pred             cCCCEEeCCCCCcCCCC-CCCCCcHHHHHHHHHHHHhC---CCccCCCCCHHHHHHHHHHHHCCCe
Confidence            4568999999999  77 777   47777777777766   5679999999999999999987653

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=97.20  E-value=0.00095  Score=47.30  Aligned_cols=54  Identities=15%  Similarity=0.084  Sum_probs=44.0

Q ss_pred             CCCceecCCCCC-CCCCchHHHHHHHHHHHhcCCcccCCCCCCC---CC----HHHHHHHHHHHhh
Q psy782           31 DHKPLNLGQGFP-DYESAPSHVSKGLADAATGENKLLNQYTRGF---GH----PRIVQAIAKLYSS   88 (100)
Q Consensus        31 ~~~~i~l~~G~P-~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~---G~----~~LR~aia~~~~~   88 (100)
                      ..++|+|+.|++ ++ .+++++.+++.+++++.   ..+|+++.   |.    .+||++||+++..
T Consensus        37 g~~~i~~~~~~~lg~-~~~~~v~~~~~~~~~~~---~~~~~~s~~~~G~~~~~~~le~~ia~~~g~   98 (393)
T TIGR01822        37 GREVLNFCANNYLGL-SSHPDLIQAAKDALDEH---GFGMSSVRFICGTQDIHKELEAKIAAFLGT   98 (393)
T ss_pred             CceEEEeeCCCcccc-CCCHHHHHHHHHHHHHh---CCCCCCcCcccCChHHHHHHHHHHHHHhCC
Confidence            457899999995 88 77788999999988764   35788888   97    8899999988865

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>PRK08637 hypothetical protein; Provisional

Probab=97.16  E-value=0.00074  Score=48.10  Aligned_cols=61  Identities=15%  Similarity=0.103  Sum_probs=37.0

Q ss_pred             ceecCCCCCCCCCchHHHHHHHHHHHhc-CCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCC
Q psy782           34 PLNLGQGFPDYESAPSHVSKGLADAATG-ENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLP   96 (100)
Q Consensus        34 ~i~l~~G~P~~~~pp~~l~~a~~~~~~~-~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~   96 (100)
                      -++.++|.-..+..+ .+.+++.+++++ .....++|+++.|.++||++|++++.+.+ ..+++
T Consensus         5 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~-~~~~~   66 (388)
T PRK08637          5 KYNATIGMATEKGGP-MYLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLREN-PSLSG   66 (388)
T ss_pred             ceecceeeEecCCCc-chHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccC-ccccc
Confidence            356667754332111 333333333332 11247899999999999999999998754 33443

>cd00609 AAT_like Aspartate aminotransferase family

Probab=96.98  E-value=0.003  Score=43.40  Aligned_cols=55  Identities=29%  Similarity=0.352  Sum_probs=40.7

Q ss_pred             eecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCC
Q psy782           35 LNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIER   92 (100)
Q Consensus        35 i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~   92 (100)
                      |+|+.|.+++ .+.+.+..+..+.  ........|.+..|..+|++++++++...+|.
T Consensus         1 ~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~   55 (350)
T cd00609           1 IDLSIGEPDF-PPPPEVLEALAAA--ALRAGLLGYYPDPGLPELREAIAEWLGRRGGV   55 (350)
T ss_pred             CCCCCCCCCC-CCCHHHHHHHHHH--hhccCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Confidence            6899999988 6665555555441  11123678999999999999999999887664

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>KOG0258|consensus

Probab=96.76  E-value=0.0076  Score=43.64  Aligned_cols=52  Identities=15%  Similarity=0.185  Sum_probs=39.5

Q ss_pred             chHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           47 APSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        47 pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      |.+.+ +.+.+.+...+-....|+..+|++-+|+.+|++..++-|++.+|+ +|
T Consensus        88 p~Dai-~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~-dI  139 (475)
T KOG0258|consen   88 PTDAI-KRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPE-DI  139 (475)
T ss_pred             CHHHH-HHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHH-He
Confidence            33444 444566666433456799999999999999999999989878887 65

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=96.36  E-value=0.015  Score=40.46  Aligned_cols=56  Identities=11%  Similarity=0.011  Sum_probs=35.5

Q ss_pred             cCCCceecCCCCC-CCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHH----HHHHHHHHH
Q psy782           30 LDHKPLNLGQGFP-DYESAPSHVSKGLADAATGENKLLNQYTRGFGHPR----IVQAIAKLY   86 (100)
Q Consensus        30 ~~~~~i~l~~G~P-~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~----LR~aia~~~   86 (100)
                      .+.++|+|+.|+| ++ .+++.+.+++.+.+++.+.....|....|..+    ||++|++++
T Consensus        14 ~g~~~id~~~~~~~g~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~   74 (360)
T TIGR00858        14 DGRRLLNFSSNDYLGL-ASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWK   74 (360)
T ss_pred             CCceEEecccCCcccC-CCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHh
Confidence            3456899999976 34 46688999999888763211223433455544    666666655

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>PLN02822 serine palmitoyltransferase

Probab=96.22  E-value=0.01  Score=43.84  Aligned_cols=56  Identities=13%  Similarity=0.055  Sum_probs=43.3

Q ss_pred             CCceecCCC-CCCCCCchHHHHHHHHHHHhcCCcc----cCCCCCCCCCHHHHHHHHHHHhh
Q psy782           32 HKPLNLGQG-FPDYESAPSHVSKGLADAATGENKL----LNQYTRGFGHPRIVQAIAKLYSS   88 (100)
Q Consensus        32 ~~~i~l~~G-~P~~~~pp~~l~~a~~~~~~~~~~~----~~~Y~~~~G~~~LR~aia~~~~~   88 (100)
                      .++|+|+.| .+++ ..++++++++.+++++.+..    -..|++..++.+|+++||+++..
T Consensus       109 ~~~id~~s~~~lgl-~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~  169 (481)
T PLN02822        109 KDVVNFASANYLGL-IGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGT  169 (481)
T ss_pred             ceEEEeECCCcCCC-CCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCC
Confidence            468999988 5588 78899999999999873211    12477777799999999999853

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=95.55  E-value=0.018  Score=40.19  Aligned_cols=44  Identities=18%  Similarity=0.198  Sum_probs=31.8

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      .++++|+.|.|.. .+|  +.+       .......+|++..| ++||++||+++
T Consensus        17 ~~~~~~~~~~~~~-~~~--~~~-------~~~~~~~~y~~~~~-~~lr~~la~~~   60 (330)
T TIGR01140        17 EDWLDFSTGINPL-GPP--VPP-------IPASAWARYPDPEY-DELRAAAAAYY   60 (330)
T ss_pred             hheeEccccCCCC-CCC--hhh-------cchHHHhhCCCccH-HHHHHHHHHHh
Confidence            4689999999877 555  111       11123678988876 99999999986

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=95.48  E-value=0.06  Score=37.83  Aligned_cols=60  Identities=10%  Similarity=-0.003  Sum_probs=40.8

Q ss_pred             CCCceecCCCCC-CCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhC
Q psy782           31 DHKPLNLGQGFP-DYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIE   91 (100)
Q Consensus        31 ~~~~i~l~~G~P-~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g   91 (100)
                      +.++|+|+.|.+ .+ .+++.+.+++.+.+.........|....|..++++.+.+.+.+.+|
T Consensus        38 g~~~id~~~~~~~g~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~   98 (385)
T PRK05958         38 GRRMLNFASNDYLGL-ARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG   98 (385)
T ss_pred             CceEEEeeCCCcccC-CCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC
Confidence            456899999964 44 5678899999988865321123455556777777777777766655

>KOG0634|consensus

Probab=95.11  E-value=0.022  Score=41.67  Aligned_cols=69  Identities=16%  Similarity=0.158  Sum_probs=42.9

Q ss_pred             hhHHHHHHHhhcC--CCceecCCCCCCCC-CchHHHHHH-------------------HHHHHhcCC---cccCCCCCCC
Q psy782           19 YSVWVEFIQLSLD--HKPLNLGQGFPDYE-SAPSHVSKG-------------------LADAATGEN---KLLNQYTRGF   73 (100)
Q Consensus        19 ~~~~~~~~~~~~~--~~~i~l~~G~P~~~-~pp~~l~~a-------------------~~~~~~~~~---~~~~~Y~~~~   73 (100)
                      .++++.+.+....  .++|+|+.|.|+++ +|...+.-.                   +.+..+++.   ...+||+++.
T Consensus        21 ~~p~~~~~~~~s~~~i~~i~lagGlPnp~~fp~~~~s~~p~~~~~~e~~~~~~~~~~~~~~~~~~~~l~~s~alQYg~s~  100 (472)
T KOG0634|consen   21 LSPLRALGDIKSASPISIISLAGGLPNPDYFPIRSDSIKPQGSWKKENGKKLNNVTFAFENEASENTLPLSRALQYGQSS  100 (472)
T ss_pred             cChHHHhhhHhhcCCCceEEecCCCCCCCcccccccccccccCccccccccccceeeeccccCCcccchhhhhhcccccc
Confidence            3455555443322  24799999999887 776433211                   111111110   1468999999


Q ss_pred             CCHHHHHHHHHHHh
Q psy782           74 GHPRIVQAIAKLYS   87 (100)
Q Consensus        74 G~~~LR~aia~~~~   87 (100)
                      |.++|+..|.++..
T Consensus       101 G~peLl~fik~h~~  114 (472)
T KOG0634|consen  101 GIPELLLFIKDHNR  114 (472)
T ss_pred             CcHHHHHHHHHhcc
Confidence            99999999998654

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=95.09  E-value=0.06  Score=38.47  Aligned_cols=49  Identities=22%  Similarity=0.371  Sum_probs=41.2

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHh
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   87 (100)
                      ++++|+..+=.+ .||+.+.+++.+.+. .   .+.|+.. ...+||+++|+++.
T Consensus        23 ~~i~LssNenP~-gp~~~~~~~~~~~~~-~---~~rYPd~-~~~~l~~a~a~~~~   71 (356)
T COG0079          23 GIIKLSSNENPY-GPPPKVIEAIRAALD-K---LNRYPDP-DYRELRAALAEYYG   71 (356)
T ss_pred             cceeecCCCCCC-CCCHHHHHHHHHHHH-h---hccCCCC-cHHHHHHHHHHHhC
Confidence            589999998777 777888888888776 3   7889877 78999999999885

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=95.06  E-value=0.074  Score=39.31  Aligned_cols=55  Identities=7%  Similarity=-0.010  Sum_probs=42.8

Q ss_pred             ecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCC---CCCCCCHHHHHHHHHHHhhhhCCC
Q psy782           36 NLGQGFPDYESAPSHVSKGLADAATGENKLLNQY---TRGFGHPRIVQAIAKLYSSLIERP   93 (100)
Q Consensus        36 ~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y---~~~~G~~~LR~aia~~~~~~~g~~   93 (100)
                      -+|+|.|++ .+|+.+.+++.+...-.  ..+.|   +..+|..+++.++.+++++.+|++
T Consensus        72 ~~g~G~~~~-~~~p~i~~~~~~~~~~~--~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~  129 (481)
T PRK04366         72 FYPLGSCTM-KYNPKINEKVARLPGFA--ELHPLQPEETVQGALELMYELQEWLKEITGMD  129 (481)
T ss_pred             eecCcccCC-CCCHHHHHHHHhCcchh--cCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC
Confidence            388899999 77888888776642111  36778   568899999999999999998874

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=94.83  E-value=0.083  Score=38.33  Aligned_cols=68  Identities=21%  Similarity=0.150  Sum_probs=42.3

Q ss_pred             hHHHHHHHhhcCC-----CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCC--CCHHHHHHHHHHH---hhh
Q psy782           20 SVWVEFIQLSLDH-----KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGF--GHPRIVQAIAKLY---SSL   89 (100)
Q Consensus        20 ~~~~~~~~~~~~~-----~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~--G~~~LR~aia~~~---~~~   89 (100)
                      .+++.+.++....     .++.||.|.|++ ..|..+.+++...  +.   ..+|.+..  -.+.+|++++++.   ++.
T Consensus        51 ~v~~~~~~~~~~~~~~~~~~~~lg~g~~~~-~~p~~~~~~~~~~--~~---~~~y~~~~~~~~~g~~~~~~e~~~~la~l  124 (447)
T PRK00451         51 ELLRHLRELAAKNKTAEEYPSFLGAGAYDH-YIPAVVDHIISRS--EF---YTAYTPYQPEISQGTLQAIFEYQTMICEL  124 (447)
T ss_pred             HHHHHHHHHHhcCCCcCcCcccCcccccCC-cCcHHHHHHHhch--hH---HHhcCCCCCccchHHHHHHHHHHHHHHHH
Confidence            4455555555433     578999999999 8888777666433  11   34465511  1244788887444   777


Q ss_pred             hCCC
Q psy782           90 IERP   93 (100)
Q Consensus        90 ~g~~   93 (100)
                      +|++
T Consensus       125 ~g~~  128 (447)
T PRK00451        125 TGMD  128 (447)
T ss_pred             hCCC
Confidence            7765

>PLN02721 threonine aldolase

Probab=94.26  E-value=0.031  Score=38.83  Aligned_cols=51  Identities=14%  Similarity=0.203  Sum_probs=35.6

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhh
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSL   89 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~   89 (100)
                      .+++|+.+.|..  |++.+.+++.+. ... .....|++.  ..+||++||+++...
T Consensus         6 ~~~~~~~~~~~~--~~~~~~~a~~~~-~~~-~~~~~~~~~--~~~l~~~la~~~~~~   56 (353)
T PLN02721          6 RVVDLRSDTVTK--PTDAMRAAMANA-EVD-DDVLGYDPT--ALRLEEEMAKIFGKE   56 (353)
T ss_pred             hhhhhhcccccC--CCHHHHHHHHhc-cCC-CcccCCCHH--HHHHHHHHHHHhCCc
Confidence            468999999987  567777777654 111 124455544  699999999999654

>PRK08354 putative aminotransferase; Provisional

Probab=94.21  E-value=0.13  Score=35.66  Aligned_cols=47  Identities=15%  Similarity=0.277  Sum_probs=34.9

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHh
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   87 (100)
                      .++|+|+.|+... + |+.+.+++.++++.    ..+|+.   ...||++||+++.
T Consensus         8 ~~~i~l~~~~np~-~-p~~~~~a~~~~~~~----~~~yp~---~~~l~~~ia~~~~   54 (311)
T PRK08354          8 EGLIDFSASVNPY-P-PEWLDEMFERAKEI----SGRYTY---YEWLEEEFSKLFG   54 (311)
T ss_pred             cceeEecCCCCCC-C-CHHHHHHHHHHHHH----hhcCCC---hHHHHHHHHHHHC
Confidence            3689999997555 4 57888888877543    457864   4679999998875

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=94.13  E-value=0.051  Score=38.24  Aligned_cols=42  Identities=14%  Similarity=0.280  Sum_probs=30.9

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      +.|+|+.+++.+ .|+..+     . +. .   .+.|+.. +.++||++||+++
T Consensus        32 ~~~~l~~ne~~~-~~~~~~-----~-~~-~---~~~Yp~~-~~~~Lr~aia~~~   73 (354)
T PRK04635         32 GDIWINANESPF-NNEYKL-----D-LA-R---LNRYPEC-QPPELINAYSAYA   73 (354)
T ss_pred             CcEEeeCCCCCC-CCChhh-----h-hH-H---hccCCCC-CHHHHHHHHHHHh
Confidence            569999999988 666433     1 11 2   5679776 6899999999875

>PLN02483 serine palmitoyltransferase

Probab=93.07  E-value=0.1  Score=38.76  Aligned_cols=51  Identities=14%  Similarity=0.070  Sum_probs=35.1

Q ss_pred             cCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhh
Q psy782           37 LGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSS   88 (100)
Q Consensus        37 l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~   88 (100)
                      ||.+.|++ .+++.+.+++.+.-.......+.|+...++.+|+++||+++..
T Consensus       111 Lgl~~~~~-~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~  161 (489)
T PLN02483        111 LGFAAADE-YCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGK  161 (489)
T ss_pred             cCcCCCCH-HHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCC
Confidence            44555666 6667888887765322111235588899999999999999864

>PLN02672 methionine S-methyltransferase

Probab=92.73  E-value=0.29  Score=39.86  Aligned_cols=47  Identities=26%  Similarity=0.168  Sum_probs=39.2

Q ss_pred             HHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           51 VSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        51 l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      +...+...+++.  ..+-|.++.|...+|+.||.++...++++++++ +|
T Consensus       406 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  452 (1082)
T PLN02672        406 FLAYLASALKGL--SYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPD-NV  452 (1082)
T ss_pred             HHHHHHHHHccC--CCCCCCCCccchHHHHHHHHHHHHhcCCcCCcc-ce
Confidence            345556667766  378899999999999999999999999999998 54

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=91.76  E-value=0.98  Score=32.82  Aligned_cols=71  Identities=24%  Similarity=0.259  Sum_probs=47.8

Q ss_pred             hcccchhHHHHHHHhh---cCCCceecCCCCC-CCC-Cch--HHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           14 FEASVYSVWVEFIQLS---LDHKPLNLGQGFP-DYE-SAP--SHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        14 ~~~~~~~~~~~~~~~~---~~~~~i~l~~G~P-~~~-~pp--~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      +.....+++-.+.+.-   .+++.|+|++|.= |.+ .+|  ..+++|-.+.+.+.  ....|-+..|.+.+++++++.+
T Consensus         5 i~~~p~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~--~~k~Yl~i~G~~~f~~~~~~ll   82 (396)
T COG1448           5 IEAAPADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQE--KTKNYLPIEGLPEFLEAVQKLL   82 (396)
T ss_pred             cccCCCCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccc--cccccCCcCCcHHHHHHHHHHh
Confidence            3344455555555532   2457899999942 222 334  67777666655544  4677999999999999999887

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=91.34  E-value=0.37  Score=34.75  Aligned_cols=53  Identities=8%  Similarity=-0.013  Sum_probs=39.2

Q ss_pred             CCceecCCCCCCCC--CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHh
Q psy782           32 HKPLNLGQGFPDYE--SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus        32 ~~~i~l~~G~P~~~--~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   87 (100)
                      ...++|..|.+...  -.++.+.+++.+.+.+.   .+.+.+..|..+|+++|++++.
T Consensus        48 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~---~~~~~~~~~~~~lae~l~~~~~  102 (423)
T TIGR00713        48 NEYIDYVLSWGPLILGHAHPRVVEAVKEALERG---TSYGAPTEAEILLAKEIISRVP  102 (423)
T ss_pred             CEEEEccccccccccCCCCHHHHHHHHHHHHhC---CcCCCCCHHHHHHHHHHHHhCC
Confidence            35789988876542  45688889998888765   3323366788999999998763

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=91.25  E-value=0.82  Score=31.68  Aligned_cols=45  Identities=11%  Similarity=0.144  Sum_probs=35.9

Q ss_pred             CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCC
Q psy782           46 SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERP   93 (100)
Q Consensus        46 ~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~   93 (100)
                      .++..+.+.+...+...   ...|....|..+|++++++++.+.+|.+
T Consensus        10 ~~~~~~~~~~~~~~n~~---~~~y~~~~~~~~le~~~~~~~~~~~g~~   54 (345)
T cd06450          10 DPPALLLEMLTSAKNAI---DFTWDESPAATEMEAEVVNWLAKLFGLP   54 (345)
T ss_pred             cHHHHHHHHHHHhcCCC---CcccccCchhHHHHHHHHHHHHHHhCCC
Confidence            44577777777766554   4569999999999999999999988876

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>PRK10534 L-threonine aldolase; Provisional

Probab=90.35  E-value=0.4  Score=33.26  Aligned_cols=38  Identities=11%  Similarity=0.013  Sum_probs=28.4

Q ss_pred             CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHh
Q psy782           46 SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus        46 ~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   87 (100)
                      .|++.+.+++.++. ..   ...|++..+..+|+++||+++.
T Consensus        11 ~p~~~~~~a~~~~~-~~---~~~Y~~~~~~~~L~~~la~~~g   48 (333)
T PRK10534         11 RPSRAMLEAMMAAP-VG---DDVYGDDPTVNALQDYAAELSG   48 (333)
T ss_pred             CCCHHHHHHHHhcc-CC---CcccCCCHHHHHHHHHHHHHhC
Confidence            45677888876643 33   4679888899999999999864

>KOG0256|consensus

Probab=86.43  E-value=0.89  Score=33.47  Aligned_cols=33  Identities=21%  Similarity=0.290  Sum_probs=26.6

Q ss_pred             cCCCCCCCCCHHHHHHHHHHHhhhhC--CCCCCCC
Q psy782           66 LNQYTRGFGHPRIVQAIAKLYSSLIE--RPLLPHQ   98 (100)
Q Consensus        66 ~~~Y~~~~G~~~LR~aia~~~~~~~g--~~~~~~~   98 (100)
                      ...|.+-.|++.+|+++|+++.+..|  +.++|++
T Consensus       114 la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~  148 (471)
T KOG0256|consen  114 LAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPER  148 (471)
T ss_pred             HhhcccccCchHHHHHHHHHHHHHhCCCCccCccc
Confidence            45799999999999999999977655  3467763

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=84.00  E-value=2.5  Score=30.01  Aligned_cols=56  Identities=11%  Similarity=0.033  Sum_probs=38.1

Q ss_pred             CCceecCCCCCCCC-Cc-hHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCC
Q psy782           32 HKPLNLGQGFPDYE-SA-PSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIER   92 (100)
Q Consensus        32 ~~~i~l~~G~P~~~-~p-p~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~   92 (100)
                      ...|+|..|.+... .+ .+.+.+++.+.++...     +....+..++++++++++.+..|.
T Consensus        39 ~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~-----~~~~~~~~~~~~~la~~l~~~~~~   96 (396)
T PRK02627         39 KEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLI-----HTSNLYYIEPQEELAEKLVELSGM   96 (396)
T ss_pred             CEEEECCccHHhccCCCCCHHHHHHHHHHHhhcc-----ccccccCCHHHHHHHHHHHhhcCC
Confidence            35799999977543 33 3788888888876541     112233478999999999876543

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=81.44  E-value=2.3  Score=30.94  Aligned_cols=52  Identities=12%  Similarity=0.058  Sum_probs=37.3

Q ss_pred             CCceecCCCCCCCC--CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           32 HKPLNLGQGFPDYE--SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        32 ~~~i~l~~G~P~~~--~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ...++|..|.+...  ..++.+.+++.+.++..   ...|.+..+..+|.+.|++.+
T Consensus        50 ~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~---~~~~~~~~~~~~la~~L~~~~  103 (426)
T PRK00062         50 NEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKG---LSFGAPTELEVELAELVIELV  103 (426)
T ss_pred             CEEEEcccchhhhhcCCCCHHHHHHHHHHHHhC---CcCCCCCHHHHHHHHHHHHhC
Confidence            45899999977542  45678889998888775   345666777777777777654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	100
1yiy_A	429	Aedes Aegypti Kynurenine Aminotransferase Length =		6e-25
1yiz_A	429	Aedes Aegypti Kynurenine Aminotrasferase Length = 4		6e-25
3e2z_B	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		3e-16
3e2f_A	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		3e-16
1w7n_A	422	Crystal Structure Of Human Kynurenine Aminotransfer		2e-11
3fvs_A	422	Human Kynurenine Aminotransferase I In Complex With		2e-11
1w7l_A	422	Crystal Structure Of Human Kynurenine Aminotransfer		2e-11

>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase Length = 429

Iteration: 1
 Score =  108 bits (271), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 54/91 (59%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Query: 6   SKFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKL 65
           +KF LP R++ S  SVWVE+IQL+  +KPLNLGQGFPDY  AP +    LA AA   + L
Sbjct: 11  NKFDLPKRYQGSTKSVWVEYIQLAAQYKPLNLGQGFPDYH-APKYALNALAAAANSPDPL 69
Query: 66  LNQYTRGFGHPRIVQAIAKLYSSLIERPLLP 96
            NQYTRGFGHPR+VQA++KLYS L++R + P
Sbjct: 70  ANQYTRGFGHPRLVQALSKLYSQLVDRTINP 100

>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase Length = 429

Iteration: 1
 Score =  108 bits (271), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 54/91 (59%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Query: 6   SKFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKL 65
           +KF LP R++ S  SVWVE+IQL+  +KPLNLGQGFPDY  AP +    LA AA   + L
Sbjct: 11  NKFDLPKRYQGSTKSVWVEYIQLAAQYKPLNLGQGFPDYH-APKYALNALAAAANSPDPL 69
Query: 66  LNQYTRGFGHPRIVQAIAKLYSSLIERPLLP 96
            NQYTRGFGHPR+VQA++KLYS L++R + P
Sbjct: 70  ANQYTRGFGHPRLVQALSKLYSQLVDRTINP 100

>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii In Complex With Kynurenine Length = 410

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/86 (47%), Positives = 59/86 (68%), Gaps = 3/86 (3%)
Query: 13 RFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRG 72
          R E    +VWVEF +L+ D   +NLGQGFPD  S PS+V + L+ AA  +N  +NQYTRG
Sbjct: 4  RIEGLDSNVWVEFTKLAADPSVVNLGQGFPDI-SPPSYVKEELSKAAFIDN--MNQYTRG 60
Query: 73 FGHPRIVQAIAKLYSSLIERPLLPHQ 98
          FGHP +V+A++ LY  + +R + P++
Sbjct: 61 FGHPALVKALSCLYGKIYQRQIDPNE 86

>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii, Plp-Bound Form Length = 410

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/86 (47%), Positives = 59/86 (68%), Gaps = 3/86 (3%)
Query: 13 RFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRG 72
          R E    +VWVEF +L+ D   +NLGQGFPD  S PS+V + L+ AA  +N  +NQYTRG
Sbjct: 4  RIEGLDSNVWVEFTKLAADPSVVNLGQGFPDI-SPPSYVKEELSKAAFIDN--MNQYTRG 60
Query: 73 FGHPRIVQAIAKLYSSLIERPLLPHQ 98
          FGHP +V+A++ LY  + +R + P++
Sbjct: 61 FGHPALVKALSCLYGKIYQRQIDPNE 86

>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I In Pmp Form Length = 422

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 13 RFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRG 72
          R +   Y+ WVEF++L+ +H  +NLGQGFPD+   P    +    A +G+  +LNQYT+ 
Sbjct: 9  RLDGIDYNPWVEFVKLASEHDVVNLGQGFPDF-PPPDFAVEAFQHAVSGDF-MLNQYTKT 66
Query: 73 FGHPRIVQAIAKLYSSLIERPLLP 96
          FG+P + + +A  +  L+ + + P
Sbjct: 67 FGYPPLTKILASFFGELLGQEIDP 90

>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With Glycerol Length = 422

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 13 RFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRG 72
          R +   Y+ WVEF++L+ +H  +NLGQGFPD+   P    +    A +G+  +LNQYT+ 
Sbjct: 9  RLDGIDYNPWVEFVKLASEHDVVNLGQGFPDF-PPPDFAVEAFQHAVSGDF-MLNQYTKT 66
Query: 73 FGHPRIVQAIAKLYSSLIERPLLP 96
          FG+P + + +A  +  L+ + + P
Sbjct: 67 FGYPPLTKILASFFGELLGQEIDP 90

>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I Length = 422

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 13 RFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRG 72
          R +   Y+ WVEF++L+ +H  +NLGQGFPD+   P    +    A +G+  +LNQYT+ 
Sbjct: 9  RLDGIDYNPWVEFVKLASEHDVVNLGQGFPDF-PPPDFAVEAFQHAVSGDF-MLNQYTKT 66
Query: 73 FGHPRIVQAIAKLYSSLIERPLLP 96
          FG+P + + +A  +  L+ + + P
Sbjct: 67 FGYPPLTKILASFFGELLGQEIDP 90

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	100
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	2e-25
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	6e-22
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	2e-20
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	4e-19
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	3e-18
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	1e-17
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	2e-17

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A* Length = 429

 Score = 96.6 bits (241), Expect = 2e-25
 Identities = 54/95 (56%), Positives = 69/95 (72%), Gaps = 1/95 (1%)

Query: 2   SSQASKFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATG 61
            +  +KF LP R++ S  SVWVE+IQL+  +KPLNLGQGFPDY  AP +    LA AA  
Sbjct: 7   ETMHNKFDLPKRYQGSTKSVWVEYIQLAAQYKPLNLGQGFPDYH-APKYALNALAAAANS 65

Query: 62  ENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLP 96
            + L NQYTRGFGHPR+VQA++KLYS L++R + P
Sbjct: 66  PDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINP 100

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A* Length = 422

 Score = 87.4 bits (217), Expect = 6e-22
 Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 2/91 (2%)

Query: 6  SKFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKL 65
          +K     R +   Y+ WVEF++L+ +H  +NLGQGFPD+   P    +    A +  + +
Sbjct: 2  AKQLQARRLDGIDYNPWVEFVKLASEHDVVNLGQGFPDFP-PPDFAVEAFQHAVS-GDFM 59

Query: 66 LNQYTRGFGHPRIVQAIAKLYSSLIERPLLP 96
          LNQYT+ FG+P + + +A  +  L+ + + P
Sbjct: 60 LNQYTKTFGYPPLTKILASFFGELLGQEIDP 90

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} PDB: 2zjg_A* 3e2f_A* 3e2z_A* Length = 410

 Score = 83.1 bits (206), Expect = 2e-20
 Identities = 38/77 (49%), Positives = 54/77 (70%), Gaps = 3/77 (3%)

Query: 20 SVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIV 79
          +VWVEF +L+ D   +NLGQGFPD    PS+V + L+ AA  +N  +NQYTRGFGHP +V
Sbjct: 11 NVWVEFTKLAADPSVVNLGQGFPDIS-PPSYVKEELSKAAFIDN--MNQYTRGFGHPALV 67

Query: 80 QAIAKLYSSLIERPLLP 96
          +A++ LY  + +R + P
Sbjct: 68 KALSCLYGKIYQRQIDP 84

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A* Length = 381

 Score = 78.8 bits (195), Expect = 4e-19
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 5/78 (6%)

Query: 10 LPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQY 69
          L PR EA+  S++     L+     +NLGQGFP     P  + + +  A   +    +QY
Sbjct: 3  LHPRTEAAKESIFPRMSGLAQRLGAVNLGQGFPSNP-PPPFLLEAVRRALGRQ----DQY 57

Query: 70 TRGFGHPRIVQAIAKLYS 87
              G P + +A+A+ ++
Sbjct: 58 APPAGLPALREALAEEFA 75

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1 Length = 386

 Score = 76.8 bits (190), Expect = 3e-18
 Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 6/96 (6%)

Query: 1  MSSQASKFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAAT 60
          M++  +      +      +++ +   L+  H+ +NL QGFPD++  P ++ + LA    
Sbjct: 1  MTN--NPLIPQSKLPQLGTTIFTQMSALAQQHQAINLSQGFPDFD-GPRYLQERLAHHVA 57

Query: 61 GENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLP 96
                NQY    G   + +AIA+    L       
Sbjct: 58 QGA---NQYAPMTGVQALREAIAQKTERLYGYQPDA 90

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis} Length = 411

 Score = 75.0 bits (185), Expect = 1e-17
 Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 4/88 (4%)

Query: 9  ALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQ 68
          A   R      +V+ E   L+     +NLGQGFPD +  P  + +   DA  G     NQ
Sbjct: 2  ATVSRLRPYATTVFAEMSALATRIGAVNLGQGFPDED-GPPKMLQAAQDAIAGGV---NQ 57

Query: 69 YTRGFGHPRIVQAIAKLYSSLIERPLLP 96
          Y  G G   + +AIA            P
Sbjct: 58 YPPGPGSAPLRRAIAAQRRRHFGVDYDP 85

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae} Length = 447

 Score = 74.7 bits (184), Expect = 2e-17
 Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 13/110 (11%)

Query: 1   MSSQASKFALPPRFEASVY-SVWVEFIQLSLD---------HKPLNLGQGFPDYESAPSH 50
           MS+   K      F ++    VW    + +            + +NLGQGF  Y   P  
Sbjct: 16  MSTSRPKVVANKYFTSNTAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFFSYS-PPQF 74

Query: 51  VSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV 100
             K    A       +NQY+   G P ++ ++ KLYS +    L    + 
Sbjct: 75  AIKEAQKALDIPM--VNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVT 122

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	100
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	99.37
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	99.26
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	99.25
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	99.22
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	99.19
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	99.18
3ele_A	398	Amino transferase; RER070207001803, structural gen	99.17
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	99.16
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	99.15
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	99.14
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	99.14
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	99.13
1vp4_A	425	Aminotransferase, putative; structural genomics, j	99.07
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	99.06
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	99.05
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	99.05
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	99.03
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	98.97
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	98.96
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	98.93
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	98.92
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	98.88
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	98.85
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	98.83
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	98.83
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	98.83
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	98.82
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	98.78
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	98.78
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	98.77
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	98.77
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	98.76
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	98.75
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	98.74
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	98.72
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	98.71
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	98.69
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	98.67
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	98.63
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	98.62
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	98.6
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	98.59
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	98.58
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	98.57
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	98.54
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	98.52
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	98.52
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	98.51
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	98.5
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	98.49
3rq1_A	418	Aminotransferase class I and II; structural genomi	98.48
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	98.39
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	98.39
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	98.39
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	98.38
3nra_A	407	Aspartate aminotransferase; structural genomics, j	98.37
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	98.33
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	98.31
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	98.29
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	98.28
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	98.25
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	98.23
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	98.18
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	97.48
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	98.11
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	98.0
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	97.9
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	97.67
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	97.67
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	97.65
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	97.56
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	97.53
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	97.43
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	97.3
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	97.28
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	97.23
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	97.23
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	97.13
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	96.84
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	96.82
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	96.79
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	96.74
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	96.65
1svv_A	359	Threonine aldolase; structural genomics, structura	96.39
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	96.02
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	95.82
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	95.7
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	95.65
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	95.29
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	95.24
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	95.23
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	95.22
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	95.07
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	95.01
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	94.92
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	94.91
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	94.84
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	94.62
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	94.5
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	94.02
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	93.97
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	93.95
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	93.9
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	93.82
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	93.77
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	93.63
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	93.44
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	93.41
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	93.28
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	93.24
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	93.23
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	93.0
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	92.78
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	92.69
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	92.08
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	91.7
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	91.42
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	91.32
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	91.2
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	91.0
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	90.3
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	90.08
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	90.04
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	89.28
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	88.69
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	88.67
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	88.45
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	88.24
3hmu_A	472	Aminotransferase, class III; structural genomics,	88.09
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	87.89
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	87.67
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	87.45
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	86.72
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	86.09
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	86.05
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	85.61
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	85.52
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	84.49
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	84.47
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	84.19
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	82.67
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	81.6
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	81.34
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	81.13
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	81.07
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	80.97
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	80.82
3pj0_A	359	LMO0305 protein; structural genomics, joint center	80.8
1o69_A	394	Aminotransferase; structural genomics, unknown fun	80.49
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	80.36
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	80.17
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	80.15
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	80.04

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=99.37  E-value=1.6e-12  Score=90.64  Aligned_cols=90  Identities=34%  Similarity=0.733  Sum_probs=77.1

Q ss_pred             ccCCCCChhhcccchhHHHHHHHhhcCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHH
Q psy782            5 ASKFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAK   84 (100)
Q Consensus         5 m~~~~~s~r~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~   84 (100)
                      |....+++++..+..+.+..+.+...+.++|+|+.|.|++ ++++.+.+++.+++.... ..++|++..|.++||++||+
T Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~v~~a~~~~~~~~~-~~~~y~~~~g~~~lr~~la~   78 (422)
T 3fvs_A            1 MAKQLQARRLDGIDYNPWVEFVKLASEHDVVNLGQGFPDF-PPPDFAVEAFQHAVSGDF-MLNQYTKTFGYPPLTKILAS   78 (422)
T ss_dssp             ---CCSCGGGTTCCCCHHHHHHHHHHTSCCEECCCSSCSS-CCCHHHHHHHHHHHHSCG-GGGSCCCTTCCHHHHHHHHH
T ss_pred             CcchhHHHHhhccCccHHHHHHHHhhcCCceEeCCCCCCC-CCCHHHHHHHHHHHhCCC-ccCCCCCCCCCHHHHHHHHH
Confidence            3445678999999999999998888888999999999999 889999999999987751 24789999999999999999


Q ss_pred             HHhhhhCCCCCC
Q psy782           85 LYSSLIERPLLP   96 (100)
Q Consensus        85 ~~~~~~g~~~~~   96 (100)
                      ++.+.+|+++++
T Consensus        79 ~~~~~~g~~~~~   90 (422)
T 3fvs_A           79 FFGELLGQEIDP   90 (422)
T ss_dssp             HHHHHHTCCCCH
T ss_pred             HHHHhhCCCCCC
Confidence            999888988776

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=99.26  E-value=1.7e-11  Score=85.11  Aligned_cols=83  Identities=48%  Similarity=0.799  Sum_probs=73.1

Q ss_pred             ChhhcccchhHHHHHHHhhcCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhh
Q psy782           11 PPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLI   90 (100)
Q Consensus        11 s~r~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~   90 (100)
                      ++|+..+..+.+..+.+.....++|+|+.|.|++ ++++.+.+++.+++...  ..++|++..|..+||++||+++.+.+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~-~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~la~~~~~~~   78 (410)
T 3e2y_A            2 AKRIEGLDSNVWVEFTKLAADPSVVNLGQGFPDI-SPPSYVKEELSKAAFID--NMNQYTRGFGHPALVKALSCLYGKIY   78 (410)
T ss_dssp             CGGGTTCCCCHHHHTTTTTTSTTSEECSSCCCCS-CCCHHHHHHHHHHHTCG--GGGSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred             chhhccCCccHHHHHHHHhcCCCeEEecCCCCCC-CCCHHHHHHHHHHHhCc--cccCCCCCCChHHHHHHHHHHHHHHh
Confidence            4677888888888888777778899999999999 88999999999998765  35689999999999999999999888


Q ss_pred             CCCCCC
Q psy782           91 ERPLLP   96 (100)
Q Consensus        91 g~~~~~   96 (100)
                      |+.+++
T Consensus        79 ~~~~~~   84 (410)
T 3e2y_A           79 QRQIDP   84 (410)
T ss_dssp             TSCCCT
T ss_pred             CCCCCC
Confidence            988887

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=99.25  E-value=1.1e-11  Score=87.96  Aligned_cols=87  Identities=13%  Similarity=0.087  Sum_probs=73.5

Q ss_pred             CChhhcccchhHHHHHHHhhcCCCceecCCCCCCCC-CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhh
Q psy782           10 LPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYE-SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSS   88 (100)
Q Consensus        10 ~s~r~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~-~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~   88 (100)
                      ++.|++....+.++.+.+....+++|+|+.|.|+++ +|++.+.+++.++++......++|++..|.++||++||+++.+
T Consensus        54 ~s~~~~~~~~s~~~~~~~~~~~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~  133 (448)
T 3aow_A           54 FSKKALEMRASEVRELLKLVETSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGK  133 (448)
T ss_dssp             CCHHHHHCCCCHHHHHHHHHHTSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHH
T ss_pred             hhHHHhcCCCcHHHHHHHhccCCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHH
Confidence            788888888888888888777778999999999875 6889999999998876432357899999999999999999977


Q ss_pred             hhCCCCCCC
Q psy782           89 LIERPLLPH   97 (100)
Q Consensus        89 ~~g~~~~~~   97 (100)
                      .+|++ +++
T Consensus       134 ~~g~~-~~~  141 (448)
T 3aow_A          134 RYGIS-QDN  141 (448)
T ss_dssp             HHCCC-TTS
T ss_pred             hcCcC-Chh
Confidence            77886 555

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=99.22  E-value=1.2e-10  Score=81.27  Aligned_cols=84  Identities=30%  Similarity=0.430  Sum_probs=73.9

Q ss_pred             CChhhcccchhHHHHHHHhhcCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhh
Q psy782           10 LPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSL   89 (100)
Q Consensus        10 ~s~r~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~   89 (100)
                      +++|+..+..+.+..+.++....++|+|+.|.|++ .+++.+.+++.+.+...   ..+|++..|.++||++||+++.+.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~-~~~~~v~~a~~~~~~~~---~~~y~~~~g~~~l~~~la~~~~~~   78 (411)
T 2o0r_A            3 TVSRLRPYATTVFAEMSALATRIGAVNLGQGFPDE-DGPPKMLQAAQDAIAGG---VNQYPPGPGSAPLRRAIAAQRRRH   78 (411)
T ss_dssp             CCGGGGGGSSCHHHHHHHHHHTTTCEESSCSSCSS-CCCHHHHHHHHHHHHTT---CCSCCCTTCCHHHHHHHHHHHHHH
T ss_pred             hhhHhHhcCccHHHHHHHHhhcCCeeeccCcCCCC-CCCHHHHHHHHHHHhcC---CCCCCCCCCCHHHHHHHHHHHHHH
Confidence            68889999999999888888778899999999988 77888999999988764   578999999999999999999988


Q ss_pred             hCCCCCCC
Q psy782           90 IERPLLPH   97 (100)
Q Consensus        90 ~g~~~~~~   97 (100)
                      +|+.++++
T Consensus        79 ~g~~~~~~   86 (411)
T 2o0r_A           79 FGVDYDPE   86 (411)
T ss_dssp             HCCCCCTT
T ss_pred             cCCCCCCC
Confidence            88877665

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=99.19  E-value=7.7e-11  Score=83.37  Aligned_cols=78  Identities=29%  Similarity=0.491  Sum_probs=66.4

Q ss_pred             cchhHHHHHHHhh---------cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHh
Q psy782           17 SVYSVWVEFIQLS---------LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus        17 ~~~~~~~~~~~~~---------~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   87 (100)
                      +..+.|..+.+++         ...++|+|+.|.|++ .+|+.+.+++.+++++.  ..++|++..|.++||++||+++.
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~  109 (447)
T 3b46_A           33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFFSY-SPPQFAIKEAQKALDIP--MVNQYSPTRGRPSLINSLIKLYS  109 (447)
T ss_dssp             CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSCSS-CCCHHHHHHHHHHTTSG--GGGSCCCTTCCHHHHHHHHHHHT
T ss_pred             cCccHHHHHHHHHHhhccchhccCCCeEEccCCCCCC-CCCHHHHHHHHHHHhCc--CCCCCCCCCCCHHHHHHHHHHHH
Confidence            5677888887765         456899999999999 78899999999998762  25789999999999999999999


Q ss_pred             hhhCCCCCCC
Q psy782           88 SLIERPLLPH   97 (100)
Q Consensus        88 ~~~g~~~~~~   97 (100)
                      +.+|..++++
T Consensus       110 ~~~g~~~~~~  119 (447)
T 3b46_A          110 PIYNTELKAE  119 (447)
T ss_dssp             TTTTSCCCGG
T ss_pred             HhcCCCCChh
Confidence            8888888776

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=99.18  E-value=8.9e-11  Score=81.31  Aligned_cols=86  Identities=22%  Similarity=0.268  Sum_probs=70.9

Q ss_pred             CChhhcccchhHHHHHHHhh-----cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHH
Q psy782           10 LPPRFEASVYSVWVEFIQLS-----LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAK   84 (100)
Q Consensus        10 ~s~r~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~   84 (100)
                      ++.++..+..+.+..+.+.+     ...++|+|+.|+|++ .+++.+.+++.+.+...   ..+|++..|.++||++||+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~-~~~~~v~~a~~~~~~~~---~~~y~~~~g~~~lr~~ia~   79 (385)
T 1b5p_A            4 LSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDF-DTPEHVKEAARRALAQG---KTKYAPPAGIPELREALAE   79 (385)
T ss_dssp             CCHHHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSCSS-CCCHHHHHHHHHHHHTT---CCSCCCTTCCHHHHHHHHH
T ss_pred             hhhHHhhcCcchHHHHHHHHHHHHhcCCCEEEecCCCCCC-CCCHHHHHHHHHHHhcC---CCCCCCCCCCHHHHHHHHH
Confidence            68888888888776666532     235799999999998 77888999998888765   5689999999999999999


Q ss_pred             HHhhhhCCCCCCCCCC
Q psy782           85 LYSSLIERPLLPHQLV  100 (100)
Q Consensus        85 ~~~~~~g~~~~~~~eI  100 (100)
                      ++.+.+|+.++++ +|
T Consensus        80 ~~~~~~g~~~~~~-~i   94 (385)
T 1b5p_A           80 KFRRENGLSVTPE-ET   94 (385)
T ss_dssp             HHHHTTCCCCCGG-GE
T ss_pred             HHHHHhCCCCChH-HE
Confidence            9998889888776 43

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=99.17  E-value=3.7e-11  Score=83.16  Aligned_cols=88  Identities=18%  Similarity=0.229  Sum_probs=70.9

Q ss_pred             CCChhhccc--chhHHHHHHHhhc-------CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcc-cCCCCCCCCCHHH
Q psy782            9 ALPPRFEAS--VYSVWVEFIQLSL-------DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKL-LNQYTRGFGHPRI   78 (100)
Q Consensus         9 ~~s~r~~~~--~~~~~~~~~~~~~-------~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~-~~~Y~~~~G~~~L   78 (100)
                      .+++|+..+  ..+.++.+.+.+.       ..++|+|+.|.|++ .+++.+.+++.+++.+.... .++|++..|.++|
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~l   81 (398)
T 3ele_A            3 VVNESMYQLGSVRSAIRELFEYGKKRAAIVGKENVYDFSIGNPSI-PAPQIVNDTIKELVTDYDSVALHGYTSAQGDVET   81 (398)
T ss_dssp             SSCHHHHHHHHCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCCS-CCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHH
T ss_pred             chhHHHhccccCchhHHHHHHHHHHHHhhcCCCCeEEeecCCCCC-CCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHH
Confidence            478888887  4667766655332       24689999999999 88899999999998764222 5789999999999


Q ss_pred             HHHHHHHHhhhhCCCCCCC
Q psy782           79 VQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        79 R~aia~~~~~~~g~~~~~~   97 (100)
                      |++||+++.+.+|+.++++
T Consensus        82 r~~la~~l~~~~g~~~~~~  100 (398)
T 3ele_A           82 RAAIAEFLNNTHGTHFNAD  100 (398)
T ss_dssp             HHHHHHHHHHHHCCCCCGG
T ss_pred             HHHHHHHHHHHhCCCCChH
Confidence            9999999999889887776

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=99.16  E-value=4.5e-11  Score=82.67  Aligned_cols=83  Identities=22%  Similarity=0.285  Sum_probs=59.2

Q ss_pred             CChhhcccchhHHHHHHHhh-----cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHH
Q psy782           10 LPPRFEASVYSVWVEFIQLS-----LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAK   84 (100)
Q Consensus        10 ~s~r~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~   84 (100)
                      ++ +++.+.++.+..+.+.+     ...++|+|+.|.|++ .+++.+.+++.+.+.+.   ..+|++..|.++||++||+
T Consensus         5 ~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~-~~~~~v~~a~~~~~~~~---~~~y~~~~g~~~lr~~ia~   79 (391)
T 3h14_A            5 NS-SRSAVDPFIVMDVMEAARRAEEAGRRIIHMEVGQPGT-GAPRGAVEALAKSLETD---ALGYTVALGLPALRQRIAR   79 (391)
T ss_dssp             CC-STTCCCCCTTHHHHHHHHHHHHTTCCCEECCCSSCSS-CSCHHHHHHHHHHHC-------------CCHHHHHHHHH
T ss_pred             hh-hHhhcCcchHHHHHHHHHHHHhcCCCeEEccCCCCCC-CCCHHHHHHHHHHHhcC---CCCCCCCCChHHHHHHHHH
Confidence            44 67776666665555433     235799999999999 77888999999988775   5789999999999999999


Q ss_pred             HHhhhhCCCCCCC
Q psy782           85 LYSSLIERPLLPH   97 (100)
Q Consensus        85 ~~~~~~g~~~~~~   97 (100)
                      ++.+.+|+.++++
T Consensus        80 ~~~~~~g~~~~~~   92 (391)
T 3h14_A           80 LYGEWYGVDLDPG   92 (391)
T ss_dssp             HHHHHHCCCCCGG
T ss_pred             HHHHHhCCCCCHH
Confidence            9999889888776

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=99.15  E-value=1.4e-10  Score=79.99  Aligned_cols=85  Identities=24%  Similarity=0.331  Sum_probs=72.5

Q ss_pred             CCChhhcccchhHHHHHHHhhcC-CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHh
Q psy782            9 ALPPRFEASVYSVWVEFIQLSLD-HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus         9 ~~s~r~~~~~~~~~~~~~~~~~~-~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   87 (100)
                      .++.|+..+..+.+..+.+.+.+ .++|+|+.|.|++ .+++.+.+++.+.+...   ..+|++..|..+||++||+++.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~-~~~~~v~~a~~~~~~~~---~~~y~~~~g~~~l~~~la~~~~   77 (389)
T 1gd9_A            2 ALSDRLELVSASEIRKLFDIAAGMKDVISLGIGEPDF-DTPQHIKEYAKEALDKG---LTHYGPNIGLLELREAIAEKLK   77 (389)
T ss_dssp             CHHHHHHHSCCCHHHHHHHHHHTCSSCEECCCCSCSS-CCCHHHHHHHHHHHHTT---CCSCCCTTCCHHHHHHHHHHHH
T ss_pred             chhhHhHhCChhHHHHHHHHHhhhcCeEecCCCCCCC-CCCHHHHHHHHHHHhCC---CCCCCCCCCcHHHHHHHHHHHH
Confidence            35778888888888888887655 4799999999998 77889999999988765   5689998999999999999999


Q ss_pred             hhhCCCCCCC
Q psy782           88 SLIERPLLPH   97 (100)
Q Consensus        88 ~~~g~~~~~~   97 (100)
                      +.+|+.++++
T Consensus        78 ~~~g~~~~~~   87 (389)
T 1gd9_A           78 KQNGIEADPK   87 (389)
T ss_dssp             HHHCCCCCTT
T ss_pred             HHhCCCCCCC
Confidence            8889877776

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=99.14  E-value=3.6e-10  Score=78.04  Aligned_cols=85  Identities=24%  Similarity=0.347  Sum_probs=73.1

Q ss_pred             CCChhhcccchhHHHHHHHhhcCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhh
Q psy782            9 ALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSS   88 (100)
Q Consensus         9 ~~s~r~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~   88 (100)
                      .+++|+..+..+.+..+.++....++|+|+.|.|++ .+++.+.+++.+.++..   ..+|++..|..+||++||+++.+
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~-~~~~~v~~a~~~~~~~~---~~~y~~~~g~~~l~~~la~~l~~   82 (386)
T 1u08_A            7 IPQSKLPQLGTTIFTQMSALAQQHQAINLSQGFPDF-DGPRYLQERLAHHVAQG---ANQYAPMTGVQALREAIAQKTER   82 (386)
T ss_dssp             CCCCSCCCCCCCHHHHHHHHHHHTTCEECCCSSCSS-CCCHHHHHHHHHHHHTT---CCSCCCTTCCHHHHHHHHHHHHH
T ss_pred             ccchhhhcCCccHHHHHHHHHhcCCeEEecCCCCCC-CCCHHHHHHHHHHHHhh---ccCCCCCCCCHHHHHHHHHHHHH
Confidence            458888888889998888776667899999999988 77889999999988764   57899999999999999999998


Q ss_pred             hhCCCCCCC
Q psy782           89 LIERPLLPH   97 (100)
Q Consensus        89 ~~g~~~~~~   97 (100)
                      .+|+.++++
T Consensus        83 ~~g~~~~~~   91 (386)
T 1u08_A           83 LYGYQPDAD   91 (386)
T ss_dssp             HHSCCCCTT
T ss_pred             HhCCCCCCC
Confidence            888877665

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=99.14  E-value=3e-10  Score=80.15  Aligned_cols=84  Identities=12%  Similarity=-0.016  Sum_probs=62.0

Q ss_pred             ChhhcccchhHHHHHHHhhc---CCCceecCCCCC---CCC-CchHHHHHHHHHHH-hcCCcccCCCCCCCCCHHHHHHH
Q psy782           11 PPRFEASVYSVWVEFIQLSL---DHKPLNLGQGFP---DYE-SAPSHVSKGLADAA-TGENKLLNQYTRGFGHPRIVQAI   82 (100)
Q Consensus        11 s~r~~~~~~~~~~~~~~~~~---~~~~i~l~~G~P---~~~-~pp~~l~~a~~~~~-~~~~~~~~~Y~~~~G~~~LR~ai   82 (100)
                      ..++..+.++.+..+.+...   ..++|+|++|.|   +.+ ++++.+++++. ++ ...  ..++|++..|+++||++|
T Consensus         5 ~~~~~~~~~~~i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~--~~~~Y~~~~G~~~lr~ai   81 (405)
T 3k7y_A            5 LSSLENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENY--KEKPYLLGNGTEDFSTLT   81 (405)
T ss_dssp             GGGCCCCCCCHHHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHC--CCCCCCTTSSCHHHHHHH
T ss_pred             hhcCCCCCCChHHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCC--CCCCCCCCCCcHHHHHHH
Confidence            45777788887766666443   357999999973   332 56799999887 54 332  368999999999999999


Q ss_pred             HHHHhhhhCCCCCCC
Q psy782           83 AKLYSSLIERPLLPH   97 (100)
Q Consensus        83 a~~~~~~~g~~~~~~   97 (100)
                      |+++...++..++++
T Consensus        82 a~~~~~~~~~~~~~~   96 (405)
T 3k7y_A           82 QNLIFGNNSKYIEDK   96 (405)
T ss_dssp             HHHHHCSSCTTTTTT
T ss_pred             HHHHcCCCCcccccc
Confidence            999977655555555

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=99.13  E-value=3.1e-10  Score=79.43  Aligned_cols=92  Identities=59%  Similarity=0.999  Sum_probs=74.3

Q ss_pred             ccCCCCChhhcccchhHHHHHHHhhcCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHH
Q psy782            5 ASKFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAK   84 (100)
Q Consensus         5 m~~~~~s~r~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~   84 (100)
                      |+.+.+++|+.....+.+..+.+.....++|+|+.|.|++ .+++.+.+++.+.+.......++|++..|.++||++||+
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~   88 (429)
T 1yiz_A           10 HNKFDLPKRYQGSTKSVWVEYIQLAAQYKPLNLGQGFPDY-HAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSK   88 (429)
T ss_dssp             --CCCSSSSCCCCTTCHHHHHHHHHHHHCCEECCSSSCSS-CCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHH
T ss_pred             ccccchhHHhhhCCchHHHHHHHHhccCCEEEecCCCCCC-CCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHH
Confidence            3445678888888888888877766666899999999998 778899999999887632235789998999999999999


Q ss_pred             HHhhhhCCCCCCC
Q psy782           85 LYSSLIERPLLPH   97 (100)
Q Consensus        85 ~~~~~~g~~~~~~   97 (100)
                      ++.+.+|++++++
T Consensus        89 ~l~~~~g~~~~~~  101 (429)
T 1yiz_A           89 LYSQLVDRTINPM  101 (429)
T ss_dssp             HHHHHHTSCCCTT
T ss_pred             HHHHHhCCCCCCc
Confidence            9988888777665

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.07  E-value=1.6e-10  Score=81.06  Aligned_cols=88  Identities=20%  Similarity=0.252  Sum_probs=70.9

Q ss_pred             CChhhcccchhHHHHHHHhhcCCCceecCCCCCCCC-CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhh
Q psy782           10 LPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYE-SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSS   88 (100)
Q Consensus        10 ~s~r~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~-~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~   88 (100)
                      ++.++..+..+.+..+.+.+..+++|+|+.|.|++. .|++.+.+++.++++.......+|++..|.++||++||+++.+
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~  100 (425)
T 1vp4_A           21 ISKIGQNMKSSIIREILKFAADKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLER  100 (425)
T ss_dssp             CCHHHHTCCCCCHHHHTTTTTSTTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHH
T ss_pred             hhhhhhcCCCcHHHHHHHhccCCCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHh
Confidence            577777777777777776666678999999999874 5789999999998876422357899999999999999999988


Q ss_pred             hhCCC-CCCC
Q psy782           89 LIERP-LLPH   97 (100)
Q Consensus        89 ~~g~~-~~~~   97 (100)
                      .+|++ ++++
T Consensus       101 ~~g~~~~~~~  110 (425)
T 1vp4_A          101 MYGITGLDED  110 (425)
T ss_dssp             HHCCCSCCGG
T ss_pred             ccCCCCCCcc
Confidence            77876 6665

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=99.06  E-value=8.8e-10  Score=76.45  Aligned_cols=87  Identities=20%  Similarity=0.206  Sum_probs=70.0

Q ss_pred             CChhhcccchhHHHHHHHhhc---CC--CceecCCCCCCCC-CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHH
Q psy782           10 LPPRFEASVYSVWVEFIQLSL---DH--KPLNLGQGFPDYE-SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIA   83 (100)
Q Consensus        10 ~s~r~~~~~~~~~~~~~~~~~---~~--~~i~l~~G~P~~~-~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia   83 (100)
                      ++.++..+..+.+..+.+.+.   .+  ++|+|+.|.|++. .|++.+.+++.+.++....... |++..|..+||++||
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la   85 (407)
T 2zc0_A            7 LAGRANWIKGSALADVMKKASELQKKGVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELA   85 (407)
T ss_dssp             SCGGGGGCCCCHHHHHHHHHHHHHHSSCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHH
T ss_pred             hhhhhccCCchHHHHHHHhhhcccCCCCceEeCCCCCCCchhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHH
Confidence            678888888888877776554   34  7899999999874 5889999999998876432346 999999999999999


Q ss_pred             HHHhhhhCCCCCCC
Q psy782           84 KLYSSLIERPLLPH   97 (100)
Q Consensus        84 ~~~~~~~g~~~~~~   97 (100)
                      +++.+.+|++++++
T Consensus        86 ~~~~~~~g~~~~~~   99 (407)
T 2zc0_A           86 AFLKKYDHLEVSPE   99 (407)
T ss_dssp             HHHHHHSCCCCCGG
T ss_pred             HHHHHhcCCCCCcc
Confidence            99988778766665

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=99.05  E-value=5.5e-10  Score=78.17  Aligned_cols=87  Identities=15%  Similarity=0.027  Sum_probs=68.5

Q ss_pred             CCCChhhcccchhHHHHHHHhhc---CCCceecCCC---CCCCC-CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHH
Q psy782            8 FALPPRFEASVYSVWVEFIQLSL---DHKPLNLGQG---FPDYE-SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQ   80 (100)
Q Consensus         8 ~~~s~r~~~~~~~~~~~~~~~~~---~~~~i~l~~G---~P~~~-~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~   80 (100)
                      |.++.++.....+.+..+.....   ..++|+|++|   +|+.. ++++.+.+++.+++.+.  ..++|++..|.++||+
T Consensus        22 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~   99 (420)
T 4f4e_A           22 MSLFSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAG--LPRGYLPIDGIAAYDA   99 (420)
T ss_dssp             CCTTTTCCCCCCCHHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTC--CCCCCCCTTCCHHHHH
T ss_pred             cCHhhcCCcCCCChHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccC--CCCCCCCCCCcHHHHH
Confidence            45789999999998888877542   3579999999   68874 33499999999998874  3678999999999999


Q ss_pred             HHHHHHhhhhCCCCCC
Q psy782           81 AIAKLYSSLIERPLLP   96 (100)
Q Consensus        81 aia~~~~~~~g~~~~~   96 (100)
                      +|++++...++..+++
T Consensus       100 ~ia~~l~~~~~~~~~~  115 (420)
T 4f4e_A          100 SVQKLLLGDDSPLIAA  115 (420)
T ss_dssp             HHHHHHHCTTCHHHHT
T ss_pred             HHHHHhcCCCcccccc
Confidence            9999997654433333

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=99.05  E-value=6.1e-10  Score=76.48  Aligned_cols=84  Identities=19%  Similarity=0.306  Sum_probs=68.4

Q ss_pred             CChhhcccchhHHHHHHHhhc-----CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHH
Q psy782           10 LPPRFEASVYSVWVEFIQLSL-----DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAK   84 (100)
Q Consensus        10 ~s~r~~~~~~~~~~~~~~~~~-----~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~   84 (100)
                      +++++..+..+.+..+...+.     ..++|+|+.|.|++ .+++.+.+++.+.++..   .++|++..|..+||++||+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~-~~~~~v~~a~~~~~~~~---~~~y~~~~~~~~l~~~la~   77 (370)
T 2z61_A            2 LSKRLLNFESFEVMDILALAQKLESEGKKVIHLEIGEPDF-NTPKPIVDEGIKSLKEG---KTHYTDSRGILELREKISE   77 (370)
T ss_dssp             CCHHHHHCCCCTTHHHHHHHHHHHHTTCCCEECCCCSCSS-CCCHHHHHHHHHHHHTT---CCSCCCTTCCHHHHHHHHH
T ss_pred             hhhhhhhccccHHHHHHHHHHHHHhcCCCEEEccCCCCCC-CCCHHHHHHHHHHHHcC---ccCCCCCCCCHHHHHHHHH
Confidence            467777777777766665432     35789999999988 67889999999988765   5789998999999999999


Q ss_pred             HHhhhhCCCCCCC
Q psy782           85 LYSSLIERPLLPH   97 (100)
Q Consensus        85 ~~~~~~g~~~~~~   97 (100)
                      ++.+.+|+.++++
T Consensus        78 ~~~~~~g~~~~~~   90 (370)
T 2z61_A           78 LYKDKYKADIIPD   90 (370)
T ss_dssp             HHHHHSSCCCCGG
T ss_pred             HHHHHhCCCCChh
Confidence            9998788877776

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=99.03  E-value=2.8e-10  Score=78.53  Aligned_cols=84  Identities=20%  Similarity=0.211  Sum_probs=66.0

Q ss_pred             CChhhcccchhHHHHHHHh----h-cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHH
Q psy782           10 LPPRFEASVYSVWVEFIQL----S-LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAK   84 (100)
Q Consensus        10 ~s~r~~~~~~~~~~~~~~~----~-~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~   84 (100)
                      ++.|+..+..+.+..+.+.    . ...++|+|+.|.|++ .+++.+.+++.+.++..   ..+|++..|..+||++||+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~-~~~~~v~~a~~~~~~~~---~~~y~~~~g~~~l~~~la~   78 (388)
T 1j32_A            3 LAARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDF-NTPKHIVEAAKAALEQG---KTRYGPAAGEPRLREAIAQ   78 (388)
T ss_dssp             CCHHHHTSCCCSSTTTHHHHHHHHTTTCCCEECCCSSCSS-CCCHHHHHHHHHHHHTT---CCSCCCTTCCHHHHHHHHH
T ss_pred             hhhHhHhCCccHHHHHHHHHHHHHhcCCCEEECCCCCCCC-CCCHHHHHHHHHHHhcC---CCCCCCCCCCHHHHHHHHH
Confidence            5677777666555444332    2 235789999999988 77889999999888765   5789999999999999999


Q ss_pred             HHhhhhCCCCCCC
Q psy782           85 LYSSLIERPLLPH   97 (100)
Q Consensus        85 ~~~~~~g~~~~~~   97 (100)
                      ++.+.+|+.++++
T Consensus        79 ~~~~~~g~~~~~~   91 (388)
T 1j32_A           79 KLQRDNGLCYGAD   91 (388)
T ss_dssp             HHHHHHCCCCCGG
T ss_pred             HHHHhcCCCCChh
Confidence            9998888877765

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=98.97  E-value=1.2e-09  Score=76.73  Aligned_cols=91  Identities=10%  Similarity=0.133  Sum_probs=66.7

Q ss_pred             CCCChhhcccc-hhHHHHHH----HhhcCCCce-ecCCCCCCCCCch--HHHHHHHHHHHhc-------C--CcccCCCC
Q psy782            8 FALPPRFEASV-YSVWVEFI----QLSLDHKPL-NLGQGFPDYESAP--SHVSKGLADAATG-------E--NKLLNQYT   70 (100)
Q Consensus         8 ~~~s~r~~~~~-~~~~~~~~----~~~~~~~~i-~l~~G~P~~~~pp--~~l~~a~~~~~~~-------~--~~~~~~Y~   70 (100)
                      |++|.+...+. ++.+..++    +....+++| +|+.|.|+. +|+  +.+.+++.+.+..       .  .....+|+
T Consensus         2 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~   80 (444)
T 3if2_A            2 MKFSKFGQKFTQPTGISQLMDDLGDALKSDQPVNMLGGGNPAK-IDAVNELFLETYKALGNDNDTGKANSSAIISMANYS   80 (444)
T ss_dssp             CCCCHHHHHHHSCCHHHHHHHHHHHHHHSSSCCEECSCCCCCC-CHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCC
T ss_pred             CCcchhhhhccCchhHHHHHHHHHhhhcCchhhhccCCCCCCc-ccchHHHHHHHHHHHHhccccccccchhhhhhhccC
Confidence            34566665543 33343333    233557899 999999999 655  7888888888766       3  12246899


Q ss_pred             CCCCCHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           71 RGFGHPRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        71 ~~~G~~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      +..|.++||++||+++.+.+|+.++++ +|
T Consensus        81 ~~~g~~~lr~~ia~~l~~~~g~~~~~~-~i  109 (444)
T 3if2_A           81 NPQGDSAFIDALVGFFNRHYDWNLTSE-NI  109 (444)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHCCCCCGG-GE
T ss_pred             CCCCCHHHHHHHHHHHHhhcCCCCCHH-HE
Confidence            999999999999999998889988877 53

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=98.96  E-value=5.8e-10  Score=77.50  Aligned_cols=69  Identities=19%  Similarity=0.247  Sum_probs=55.0

Q ss_pred             cCCCceecCCCCCCCCCch--HHHHHHHHHHHhcCC--cccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           30 LDHKPLNLGQGFPDYESAP--SHVSKGLADAATGEN--KLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        30 ~~~~~i~l~~G~P~~~~pp--~~l~~a~~~~~~~~~--~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      ..+++|+|+.|.|++ .|+  +.+.+++.+++.+..  ...++|++..|.++||++||+++.+.+|+.++++ +|
T Consensus        29 ~~~~~i~l~~g~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i  101 (417)
T 3g7q_A           29 RTPGAIMLGGGNPAH-IPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQ-NI  101 (417)
T ss_dssp             ---CCEECSCCCCCC-CHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCGG-GE
T ss_pred             cCCCceEecCcCCCC-CChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCcc-cE
Confidence            346899999999998 554  788999988876542  1235899999999999999999998889988877 54

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=98.93  E-value=2.2e-09  Score=74.79  Aligned_cols=85  Identities=24%  Similarity=0.317  Sum_probs=52.7

Q ss_pred             CCChhhcccchhHHHHHHHhh-----cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHH
Q psy782            9 ALPPRFEASVYSVWVEFIQLS-----LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIA   83 (100)
Q Consensus         9 ~~s~r~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia   83 (100)
                      .++.++..+..+.+..+.+..     ...++|+|+.|.|++ .+++.+.+++.+.+...  ..++|++..|..+||++||
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~-~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia   85 (412)
T 2x5d_A            9 RRFARIDRLPPYVFNITAELKMAARRRGEDIIDLSMGNPDG-PTPPHIVEKLCTVAQRE--DTHGYSTSRGIPRLRRAIS   85 (412)
T ss_dssp             ------------CHHHHHHHHHHHHHTTCCCEECSSCCCCS-CCCHHHHHHHHHTC-----------CTTCCHHHHHHHH
T ss_pred             chhHHHhhcCchHHHHHHHHHHHHhhcCCCEEecCCCCCCC-CCCHHHHHHHHHHHhCC--CCCCCCCCCCcHHHHHHHH
Confidence            467777777766666555432     235689999999988 77889999998887654  2568998999999999999


Q ss_pred             HHHhhhhCCCCCC
Q psy782           84 KLYSSLIERPLLP   96 (100)
Q Consensus        84 ~~~~~~~g~~~~~   96 (100)
                      +++.+.+|+++++
T Consensus        86 ~~~~~~~g~~~~~   98 (412)
T 2x5d_A           86 HWYRDRYDVQIDP   98 (412)
T ss_dssp             HHHHHHHCCCCCT
T ss_pred             HHHHHHhCCCCCC
Confidence            9998888987776

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=98.92  E-value=4e-09  Score=72.79  Aligned_cols=82  Identities=16%  Similarity=0.184  Sum_probs=66.2

Q ss_pred             ChhhcccchhHHHHHHHhhc------CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHH
Q psy782           11 PPRFEASVYSVWVEFIQLSL------DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAK   84 (100)
Q Consensus        11 s~r~~~~~~~~~~~~~~~~~------~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~   84 (100)
                      +.+++.+..+.+..+.+...      ..++|+|+.|.|++ .+++.+.+++.+.+. .   ..+|++..|.++||++||+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~-~~~~~v~~a~~~~~~-~---~~~y~~~~g~~~lr~~la~   77 (396)
T 3jtx_A            3 NTLLKQLKPYPFARLHEAMQGISAPEGMEAVPLHIGEPKH-PTPKVITDALTASLH-E---LEKYPLTAGLPELRQACAN   77 (396)
T ss_dssp             HHHHHHCCSCHHHHHHHHTTTCCCCTTCCCEECSCCSCCS-CCCHHHHHHHHHTGG-G---GGSCCCTTCCHHHHHHHHH
T ss_pred             hhhhccCCCChHHHHHHHHHhhhhccCCCeEEeCCcCCCC-CCCHHHHHHHHHHhh-h---ccCCCCCCCcHHHHHHHHH
Confidence            45666777777777766432      24699999999999 888999999988775 3   6789999999999999999


Q ss_pred             HHhhhhCCC-CCCC
Q psy782           85 LYSSLIERP-LLPH   97 (100)
Q Consensus        85 ~~~~~~g~~-~~~~   97 (100)
                      ++.+.+|+. ++++
T Consensus        78 ~l~~~~g~~~~~~~   91 (396)
T 3jtx_A           78 WLKRRYDGLTVDAD   91 (396)
T ss_dssp             HHHHHTTTCCCCTT
T ss_pred             HHHHhcCCCCCCCC
Confidence            999888877 6665

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=98.88  E-value=5.1e-09  Score=72.53  Aligned_cols=84  Identities=20%  Similarity=0.220  Sum_probs=67.8

Q ss_pred             CChhhcccchhHHHHHHHhh-----cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHH
Q psy782           10 LPPRFEASVYSVWVEFIQLS-----LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAK   84 (100)
Q Consensus        10 ~s~r~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~   84 (100)
                      .+.++..+..+.+..+....     ...++|+|+.|.|++ .+++.+.+++.+.+...   ..+|++..|..+||++||+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~-~~~~~v~~a~~~~~~~~---~~~y~~~~g~~~lr~~la~   89 (389)
T 1o4s_A           14 VSRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDF-PTPEPVVEEAVRFLQKG---EVKYTDPRGIYELREGIAK   89 (389)
T ss_dssp             CCHHHHHSCCCSSHHHHHHHHHHHHTTCCCEECCCSSCSS-CCCHHHHHHHHHHHTTC---CCCCCCTTCCHHHHHHHHH
T ss_pred             HHHHHhhcCccHHHHHHHHHHHHHhcCCCEEEccCCCCCC-CCCHHHHHHHHHHHhcC---CCCCCCCCCCHHHHHHHHH
Confidence            57788888777666665533     235789999999988 67788999999988765   5689988999999999999


Q ss_pred             HHhhhhCCCCCCC
Q psy782           85 LYSSLIERPLLPH   97 (100)
Q Consensus        85 ~~~~~~g~~~~~~   97 (100)
                      ++.+.+|++++++
T Consensus        90 ~~~~~~g~~~~~~  102 (389)
T 1o4s_A           90 RIGERYKKDISPD  102 (389)
T ss_dssp             HHHHHHTCCCCGG
T ss_pred             HHHHHhCCCCCHH
Confidence            9988788877665

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=98.85  E-value=4.4e-09  Score=73.19  Aligned_cols=85  Identities=15%  Similarity=0.032  Sum_probs=62.8

Q ss_pred             ChhhcccchhHHHHHHHhhc---CCCceecCCCCC-CC--C-CchHHHHHHHHH-HHhcCCcccCCCCCCCCCHHHHHHH
Q psy782           11 PPRFEASVYSVWVEFIQLSL---DHKPLNLGQGFP-DY--E-SAPSHVSKGLAD-AATGENKLLNQYTRGFGHPRIVQAI   82 (100)
Q Consensus        11 s~r~~~~~~~~~~~~~~~~~---~~~~i~l~~G~P-~~--~-~pp~~l~~a~~~-~~~~~~~~~~~Y~~~~G~~~LR~ai   82 (100)
                      .+++.....+.+..+.+...   ..++|+|+.|.| ++  . ++++.+.+++.+ .+...  ..++|++..|.++||++|
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~--~~~~y~~~~g~~~lr~~i   82 (412)
T 1yaa_A            5 FNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSS--YNHEYLGITGLPSLTSNA   82 (412)
T ss_dssp             TTTCCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTT--CCCCCCCTTCCHHHHHHH
T ss_pred             hccCcccCCCcHHHHHHHHhcCCCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcc--cccCCCCCCCcHHHHHHH
Confidence            46666666666666555432   357899999997 33  2 456889999998 87643  356899999999999999


Q ss_pred             HHHHhhhhCCCCCCC
Q psy782           83 AKLYSSLIERPLLPH   97 (100)
Q Consensus        83 a~~~~~~~g~~~~~~   97 (100)
                      |+++...+|+.++++
T Consensus        83 a~~~~~~~~~~~~~~   97 (412)
T 1yaa_A           83 AKIIFGTQSDALQED   97 (412)
T ss_dssp             HHHHHCTTCHHHHTT
T ss_pred             HHHHhcCCCCCCCcc
Confidence            999976567656665

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=98.83  E-value=8.7e-09  Score=71.60  Aligned_cols=87  Identities=16%  Similarity=0.068  Sum_probs=65.0

Q ss_pred             CChhhcccchhHHHHHHHhhc---CCCceecCCCCC-CCC---CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHH
Q psy782           10 LPPRFEASVYSVWVEFIQLSL---DHKPLNLGQGFP-DYE---SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAI   82 (100)
Q Consensus        10 ~s~r~~~~~~~~~~~~~~~~~---~~~~i~l~~G~P-~~~---~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~ai   82 (100)
                      +..++..+..+.+..+.+...   ..++|+|+.|.| +..   .+++.+.+++.+.+++. ...++|++..|.++||++|
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~~y~~~~g~~~lr~~l   83 (412)
T 1ajs_A            5 VFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNS-SLNHEYLPILGLAEFRTCA   83 (412)
T ss_dssp             TTTTCCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCT-TCCCCCCCTTCCHHHHHHH
T ss_pred             hhhhCcccCCchHHHHHHHHhhcCCCCceeeccceecCCCCCccccHHHHHHHHHhhhCh-hhccCCCCCCCCHHHHHHH
Confidence            355777788888888877654   357999999997 432   45588999998887331 1357899999999999999


Q ss_pred             HHHHhhhhCCCCCCC
Q psy782           83 AKLYSSLIERPLLPH   97 (100)
Q Consensus        83 a~~~~~~~g~~~~~~   97 (100)
                      |+++...+|+.++++
T Consensus        84 a~~~~~~~~~~~~~~   98 (412)
T 1ajs_A           84 SRLALGDDSPALQEK   98 (412)
T ss_dssp             HHHHHCTTCHHHHTT
T ss_pred             HHHHhcCCCCccCCC
Confidence            999966556655555

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=98.83  E-value=1.1e-08  Score=71.03  Aligned_cols=86  Identities=21%  Similarity=0.289  Sum_probs=64.3

Q ss_pred             CCCChhhcccchhHHHHHH---Hhh-cCCCceecCCCCC---CCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHH
Q psy782            8 FALPPRFEASVYSVWVEFI---QLS-LDHKPLNLGQGFP---DYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQ   80 (100)
Q Consensus         8 ~~~s~r~~~~~~~~~~~~~---~~~-~~~~~i~l~~G~P---~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~   80 (100)
                      +..+.|++.+..+.+..+.   ++. ...++|+|+.|.|   ++ .+++.+.+++.+.+...   ..+|++..|..+||+
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~-~~~~~v~~a~~~~~~~~---~~~y~~~~g~~~l~~   85 (406)
T 1xi9_A           10 IRASKRALSVEYAIRDVVLPARELEKKGIKVIRLNIGDPVKFDF-QPPEHMKEAYCKAIKEG---HNYYGDSEGLPELRK   85 (406)
T ss_dssp             CCCCHHHHTCCC-------CHHHHHHTTCCCEECCCCCGGGTTC-CCCHHHHHHHHHHHHTT---CCSCCCTTCCHHHHH
T ss_pred             hhHHHHHhcCChhHHHHHHHHHHHHHcCCCEEEecCCCCCcCCC-CCCHHHHHHHHHHHhcC---CCCCCCCCCcHHHHH
Confidence            4678888888877665554   222 2357999999999   77 67788999999888765   468999999999999


Q ss_pred             HHHHHHhhhhCCCCCCC
Q psy782           81 AIAKLYSSLIERPLLPH   97 (100)
Q Consensus        81 aia~~~~~~~g~~~~~~   97 (100)
                      +||+++.+.+|+.++++
T Consensus        86 ~la~~l~~~~g~~~~~~  102 (406)
T 1xi9_A           86 AIVEREKRKNGVDITPD  102 (406)
T ss_dssp             HHHHHHHHHHCCCCCGG
T ss_pred             HHHHHHHHhcCCCCCHH
Confidence            99999998888887765

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=98.82  E-value=8.9e-09  Score=71.95  Aligned_cols=64  Identities=14%  Similarity=0.164  Sum_probs=56.4

Q ss_pred             CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCC
Q psy782           31 DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        31 ~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~   97 (100)
                      ..++|+|+.|.|++ .+++.+.+++.+.+...  ..++|++..|..+||++||+++.+.+|++++++
T Consensus        43 g~~~i~l~~~~~~~-~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~  106 (437)
T 3g0t_A           43 GTKFCRMEMGVPGL-PAPQIGIETEIQKLREG--VASIYPNLDGLPELKQEASRFAKLFVNIDIPAR  106 (437)
T ss_dssp             TCCCEECCCCSCCS-CCCHHHHHHHHHHHHHT--GGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGG
T ss_pred             CCCEEeccCcCCCC-CCCHHHHHHHHHHHhCC--cCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcc
Confidence            46799999999999 88899999999988765  238899999999999999999998889888776

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=98.78  E-value=4.5e-09  Score=73.23  Aligned_cols=84  Identities=17%  Similarity=0.177  Sum_probs=65.6

Q ss_pred             CCChhhcccchhHHHHHHH----hh-cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHH
Q psy782            9 ALPPRFEASVYSVWVEFIQ----LS-LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIA   83 (100)
Q Consensus         9 ~~s~r~~~~~~~~~~~~~~----~~-~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia   83 (100)
                      .++.|+..+..+.+..+.+    .. ...++|+|+.|.|++ .+++.+.+++ +.+...   ..+|++..|..+||++||
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~-~~~~~v~~a~-~~l~~~---~~~y~~~~g~~~l~~~la   89 (409)
T 2gb3_A           15 VFSDRVLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQPDL-KTPEVFFERI-YENKPE---VVYYSHSAGIWELREAFA   89 (409)
T ss_dssp             -CCHHHHSCCCCTTGGGHHHHHHHHHTTCEEEECSSCCCCS-CCCTHHHHHH-HHTCCS---SCCCCCTTCCHHHHHHHH
T ss_pred             HHHHHhhcCCccHHHHHHHHHHHHHhcCCCEEeccCCCCCC-CCCHHHHHHH-HHHhcC---CCCCCCCCCcHHHHHHHH
Confidence            5788888887765544433    22 235689999999988 6778899999 888654   568999999999999999


Q ss_pred             HHHhhhhCCCCCCC
Q psy782           84 KLYSSLIERPLLPH   97 (100)
Q Consensus        84 ~~~~~~~g~~~~~~   97 (100)
                      +++.+.+|+.++++
T Consensus        90 ~~~~~~~g~~~~~~  103 (409)
T 2gb3_A           90 SYYKRRQRVDVKPE  103 (409)
T ss_dssp             HHHHHTSCCCCCGG
T ss_pred             HHHHHHhCCCCCHH
Confidence            99988778777665

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=98.78  E-value=1.5e-08  Score=69.46  Aligned_cols=75  Identities=17%  Similarity=0.270  Sum_probs=59.6

Q ss_pred             chhHHHHHHHhhcC----CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCC
Q psy782           18 VYSVWVEFIQLSLD----HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERP   93 (100)
Q Consensus        18 ~~~~~~~~~~~~~~----~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~   93 (100)
                      .++.+..+.+....    .++|+|+.|.|++ .+|+.+.+++.+.+ ..   ..+|++..|.++||++||+++.+.+|+.
T Consensus         5 ~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~~-~~~~~v~~a~~~~~-~~---~~~y~~~~g~~~lr~~la~~l~~~~g~~   79 (376)
T 3ezs_A            5 EPYPFERLRALLKEITPKKRGLDLGIGEPQF-ETPKFIQDALKNHT-HS---LNIYPKSAFEESLRAAQRGFFKRRFKIE   79 (376)
T ss_dssp             CCCHHHHHHHHHTTCCCSSCCCBCSSCCCCS-CCCHHHHHHHHTTG-GG---GGSCCCTTCCHHHHHHHHHHHHHHHSCC
T ss_pred             CcchHHHHHHHHHhhhccCCEEEeCCCCCCC-CCCHHHHHHHHHhh-hh---cCCCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence            44556566554322    2799999999999 78889999988876 22   6789999999999999999999888987


Q ss_pred             CCCC
Q psy782           94 LLPH   97 (100)
Q Consensus        94 ~~~~   97 (100)
                      ++++
T Consensus        80 ~~~~   83 (376)
T 3ezs_A           80 LKEN   83 (376)
T ss_dssp             CCGG
T ss_pred             CCHH
Confidence            7765

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=98.77  E-value=4.7e-08  Score=68.73  Aligned_cols=86  Identities=19%  Similarity=0.188  Sum_probs=62.7

Q ss_pred             CCChhhcccch-hHHHHHHHh----h---cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCC--cccCCCCCCCCCHHH
Q psy782            9 ALPPRFEASVY-SVWVEFIQL----S---LDHKPLNLGQGFPDYESAPSHVSKGLADAATGEN--KLLNQYTRGFGHPRI   78 (100)
Q Consensus         9 ~~s~r~~~~~~-~~~~~~~~~----~---~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~--~~~~~Y~~~~G~~~L   78 (100)
                      .++.++..+.. ..+..+...    .   ...++|+|+.|+|++ ++++.+.+++.+++....  ...++|++..|.++|
T Consensus        38 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l  116 (449)
T 3qgu_A           38 QRNENFGKLRAGYLFPEIARRRKAHQEKNPDAKIISLGIGDTTE-PLPKYIADAMAKAAAGLATREGYSGYGAEQGQGAL  116 (449)
T ss_dssp             CCCHHHHHCCSCCHHHHHHHHHHHHHHHCTTCCCEECSSCCCCC-CCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHH
T ss_pred             hhhHHHHhCCCcchHHHHHHHHHHHHhhCCCCCEEEeeCCCCCC-CCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHH
Confidence            34555655554 244343331    1   134699999999999 888999999999887421  135789999999999


Q ss_pred             HHHHHHHHhhhhCCCCCCC
Q psy782           79 VQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        79 R~aia~~~~~~~g~~~~~~   97 (100)
                      |++||+++.  +|+.++++
T Consensus       117 r~~ia~~~~--~g~~~~~~  133 (449)
T 3qgu_A          117 REAVASTFY--GHAGRAAD  133 (449)
T ss_dssp             HHHHHHHHH--TTTTCCGG
T ss_pred             HHHHHHHHH--cCCCCCHH
Confidence            999999997  58777766

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=98.77  E-value=1.9e-08  Score=69.61  Aligned_cols=82  Identities=20%  Similarity=0.116  Sum_probs=58.6

Q ss_pred             hcccchhHHHHHHHh-h--cCCCceecCCCCC-CCC-Cch--HHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           14 FEASVYSVWVEFIQL-S--LDHKPLNLGQGFP-DYE-SAP--SHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        14 ~~~~~~~~~~~~~~~-~--~~~~~i~l~~G~P-~~~-~pp--~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      +.....+.+..+.+. .  ..+++|+|++|.| |+. .|+  +.+.+++.+.+...  ...+|++..|.++||++||+++
T Consensus         7 ~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~   84 (401)
T 7aat_A            7 VEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKK--MDKEYLPIAGLADFTRASAELA   84 (401)
T ss_dssp             CCCCCCCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTT--CCCCCCCTTCCHHHHHHHHHHH
T ss_pred             CCCCCCChhHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccc--cccCCCCCCCCHHHHHHHHHHh
Confidence            333444444444332 2  2346899999998 764 333  57888888877642  3678999999999999999999


Q ss_pred             hhhhCCCCCCC
Q psy782           87 SSLIERPLLPH   97 (100)
Q Consensus        87 ~~~~g~~~~~~   97 (100)
                      .+.+|..++++
T Consensus        85 ~~~~~~~~~~~   95 (401)
T 7aat_A           85 LGENSEAFKSG   95 (401)
T ss_dssp             HCTTCHHHHTT
T ss_pred             cCCCccccccC
Confidence            88778777676

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=98.76  E-value=7.4e-09  Score=72.18  Aligned_cols=83  Identities=18%  Similarity=0.186  Sum_probs=62.6

Q ss_pred             ChhhcccchhHHHHHHHhhc---CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHh
Q psy782           11 PPRFEASVYSVWVEFIQLSL---DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus        11 s~r~~~~~~~~~~~~~~~~~---~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   87 (100)
                      +.++..+..+.+..+.+...   ..++|+|+.|.|++ .+++.+.+++.+.++..  ..++|++..|.++||++||+++.
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~-~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~~~   99 (404)
T 2o1b_A           23 SNKLANIPDSYFGKTMGRKIEHGPLPLINMAVGIPDG-PTPQGIIDHFQKALTIP--ENQKYGAFHGKEAFKQAIVDFYQ   99 (404)
T ss_dssp             CHHHHTSCCCTTC-------CCCSSCCEECCCCSCSS-CCCHHHHHHHHHHTTCH--HHHSCCCTTCCHHHHHHHHHHHH
T ss_pred             hhHhhhCCchHHHHHHHHHHhcCCCCEEecCCcCCCC-CCCHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHHHHH
Confidence            77777777776666555433   23589999999988 67788999999888653  25689988999999999999998


Q ss_pred             hhhCCCCCC
Q psy782           88 SLIERPLLP   96 (100)
Q Consensus        88 ~~~g~~~~~   96 (100)
                      +.+|+++++
T Consensus       100 ~~~g~~~~~  108 (404)
T 2o1b_A          100 RQYNVTLDK  108 (404)
T ss_dssp             HHHCCCCCT
T ss_pred             HHhCCCCCC
Confidence            888988776

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=98.75  E-value=5.2e-08  Score=68.20  Aligned_cols=87  Identities=16%  Similarity=0.163  Sum_probs=63.5

Q ss_pred             CCCChhhcccchh-HHHHHHHhh-------cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCC--cccCCCCCCCCCHH
Q psy782            8 FALPPRFEASVYS-VWVEFIQLS-------LDHKPLNLGQGFPDYESAPSHVSKGLADAATGEN--KLLNQYTRGFGHPR   77 (100)
Q Consensus         8 ~~~s~r~~~~~~~-~~~~~~~~~-------~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~--~~~~~Y~~~~G~~~   77 (100)
                      ..++.++..+... .+..+....       ...++|+|++|+|++ .+|+.+.+++.+++....  ...++|++..|.++
T Consensus        24 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~  102 (432)
T 3ei9_A           24 VSRNSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTTE-PIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKP  102 (432)
T ss_dssp             CCCCHHHHHCCSSCHHHHHHHHHHHHHHHCTTCCCEECSSCCCCS-CCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHH
T ss_pred             cccChHHHhCCCCccHHHHHHHHHhhhhcCCCCCeEEccCCCCCC-CCCHHHHHHHHHHHhcccccCCccCCCCCCCCHH
Confidence            4566777777653 555443321       124799999999999 888999999998887421  12568999999999


Q ss_pred             HHHHHHHHHhhhhCCCCCCC
Q psy782           78 IVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        78 LR~aia~~~~~~~g~~~~~~   97 (100)
                      ||++||+++.+  |+.++++
T Consensus       103 l~~~ia~~~~~--~~~~~~~  120 (432)
T 3ei9_A          103 LRAAIAKTFYG--GLGIGDD  120 (432)
T ss_dssp             HHHHHHHHHHT--TTTCCGG
T ss_pred             HHHHHHHHHHc--cCCCCcc
Confidence            99999999974  5555554

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=98.74  E-value=3.5e-10  Score=79.37  Aligned_cols=83  Identities=14%  Similarity=0.151  Sum_probs=61.2

Q ss_pred             CCChhhcccchhHHHHHHHhhcC--CCceecCCCCCCCC-CchHHHHHHHH---------HHHhcCCcccCCCCCCCCCH
Q psy782            9 ALPPRFEASVYSVWVEFIQLSLD--HKPLNLGQGFPDYE-SAPSHVSKGLA---------DAATGENKLLNQYTRGFGHP   76 (100)
Q Consensus         9 ~~s~r~~~~~~~~~~~~~~~~~~--~~~i~l~~G~P~~~-~pp~~l~~a~~---------~~~~~~~~~~~~Y~~~~G~~   76 (100)
                      .+++|++.+..+.++.+.+.+..  .++|+|+.|.|+++ +|...+..++.         ....    ..++|++..|++
T Consensus         6 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~~~G~~   81 (425)
T 2r2n_A            6 FITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMK----RALQYSPSAGIP   81 (425)
T ss_dssp             GSCHHHHTCCCCSGGGHHHHHHHSCTTCEECCCCCCCGGGCSEEEEEEEETTSCCEEECHHHHH----HHTSCCCTTCCH
T ss_pred             HHHHHHhcCCCchHHHHHHHhhcCCCCeEEcCCcCCCchhCCHHHHHHHHhhcccccccccchh----hhcCCCCCCCCH
Confidence            47899999998888888876644  67999999999986 44322211111         1111    246899999999


Q ss_pred             HHHHHHHHHHhhhhCCCCC
Q psy782           77 RIVQAIAKLYSSLIERPLL   95 (100)
Q Consensus        77 ~LR~aia~~~~~~~g~~~~   95 (100)
                      +||++|++++.+.+|+..+
T Consensus        82 ~lr~~ia~~l~~~~g~~~~  100 (425)
T 2r2n_A           82 ELLSWLKQLQIKLHNPPTI  100 (425)
T ss_dssp             HHHHHHHHHHHHHHCCTTT
T ss_pred             HHHHHHHHHHHHhcCCCCc
Confidence            9999999999988898764

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=98.72  E-value=1.4e-08  Score=69.77  Aligned_cols=64  Identities=20%  Similarity=0.194  Sum_probs=54.0

Q ss_pred             CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCC
Q psy782           31 DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        31 ~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~   97 (100)
                      ..++|+|+.|.|++ .+++.+.+++.+.++..  ..++|++..|..+||++||+++.+.+|++++++
T Consensus        24 g~~~idl~~~~~~~-~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~   87 (376)
T 2dou_A           24 GVGLIDLSIGSTDL-PPPEAPLKALAEALNDP--TTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPR   87 (376)
T ss_dssp             TCCCEECSSCCCCC-CCCHHHHHHHHHHTTCG--GGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTT
T ss_pred             CCCEEeccCCCCCC-CCCHHHHHHHHHHHhCC--CcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Confidence            35689999999988 67788999999988653  367898778999999999999988889887665

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=98.71  E-value=3.9e-08  Score=67.68  Aligned_cols=73  Identities=30%  Similarity=0.473  Sum_probs=59.8

Q ss_pred             CCChhhcccchhHHHHHHHhhcCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782            9 ALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus         9 ~~s~r~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      .+++|+..+..+.+..+.+.....++|+|+.|.|++ .+++.+.+++.+++..    .++|++..|.++||++||+++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~-~~~~~v~~a~~~~~~~----~~~y~~~~~~~~l~~~la~~~   74 (381)
T 1v2d_A            2 RLHPRTEAAKESIFPRMSGLAQRLGAVNLGQGFPSN-PPPPFLLEAVRRALGR----QDQYAPPAGLPALREALAEEF   74 (381)
T ss_dssp             CCCGGGGGC---CHHHHHHHHHHHTCEECCCCSCSS-CCCHHHHHHHHHHTTT----SCSCCCTTCCHHHHHHHHHHH
T ss_pred             chhhhhhhcCccHHHHHHHHHhcCCeEEecCCCCCC-CCCHHHHHHHHHHHHH----hcCCCCCCCCHHHHHHHHHhc
Confidence            468888888888888887776667899999999998 7889999999988764    457998889999999999985

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=98.69  E-value=6.9e-08  Score=68.56  Aligned_cols=77  Identities=14%  Similarity=0.039  Sum_probs=54.7

Q ss_pred             CCCChhhcccc---hhHHHHHHHh--hcCCCceecCCCC---CCCCCch--HHHHHHHHHHHhcCCcccCCCCCCCCCHH
Q psy782            8 FALPPRFEASV---YSVWVEFIQL--SLDHKPLNLGQGF---PDYESAP--SHVSKGLADAATGENKLLNQYTRGFGHPR   77 (100)
Q Consensus         8 ~~~s~r~~~~~---~~~~~~~~~~--~~~~~~i~l~~G~---P~~~~pp--~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~   77 (100)
                      |..++|++++.   ++.+-.+.+.  ....+.|+||+|.   ++- .||  +.+++|..+++..+  ..+.|.|..|+++
T Consensus        15 m~~~~~~~~v~~~p~d~i~~l~~~~~~d~~~kinLgvG~y~d~~g-~~~vl~~Vk~A~~~~~~~~--~~~~Y~p~~G~p~   91 (420)
T 4h51_A           15 MTTAERWQKIQAQAPDVIFDLAKRAAAAKGPKANLVIGAYRDEQG-RPYPLRVVRKAEQLLLDMN--LDYEYLPISGYQP   91 (420)
T ss_dssp             CCHHHHHHTCCCCCCCHHHHHHHHHHHCCSSCEECCSCCCBCTTS-CBCCCHHHHHHHHHHHHTT--CCCCCCCTTCCHH
T ss_pred             hhhhHHHhCCCCCCCChHHHHHHHHhcCCCCCEEeecCcccCCCC-CCCCCHHHHHHHHHHhcCC--CCCCCCCcCChHH
Confidence            45678877765   4455455442  2233589999993   333 333  88999988877665  3456999999999


Q ss_pred             HHHHHHHHHh
Q psy782           78 IVQAIAKLYS   87 (100)
Q Consensus        78 LR~aia~~~~   87 (100)
                      ||+++++++.
T Consensus        92 lr~aia~~~~  101 (420)
T 4h51_A           92 FIDEAVKIIY  101 (420)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhc
Confidence            9999999874

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=98.67  E-value=6.5e-08  Score=66.96  Aligned_cols=77  Identities=16%  Similarity=0.139  Sum_probs=63.4

Q ss_pred             CChhhcccchhHHHHHHHhhcCCCceecCCCCCCCC-CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           10 LPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYE-SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        10 ~s~r~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~-~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ++.|+..+..+.++.+.......++|+|+.|.|++. .|++.+.+++.++++..+....+|++..|..+||++||+++
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~   87 (397)
T 2zyj_A           10 FGKGAGRIQASTIRELLKLTQRPGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWI   87 (397)
T ss_dssp             SCGGGGGCCCCHHHHHHHHHTSTTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHH
T ss_pred             hhhhhcccCchHHHHHHhhccCCCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHh
Confidence            678888888888887777766678999999998874 47889999999888764223578998899999999999998

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=98.63  E-value=2.3e-09  Score=74.80  Aligned_cols=73  Identities=15%  Similarity=0.156  Sum_probs=58.7

Q ss_pred             hhhcccchhHHHHHHHhhcCCCceecCCCCCC---CCCchHHHHHHHH--HHHhcCCcccCCC-CCCCCCHHHHHHHHHH
Q psy782           12 PRFEASVYSVWVEFIQLSLDHKPLNLGQGFPD---YESAPSHVSKGLA--DAATGENKLLNQY-TRGFGHPRIVQAIAKL   85 (100)
Q Consensus        12 ~r~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~---~~~pp~~l~~a~~--~~~~~~~~~~~~Y-~~~~G~~~LR~aia~~   85 (100)
                      +++..+..+.+..+.+.....++|+|+.|.|+   + ++++.+.+++.  +++. .+...++| ++..|.++||++||++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~-~~~~~v~~a~~~~~~~~-~~~~~~~Yp~~~~g~~~lr~~ia~~   82 (423)
T 3ez1_A            5 EASRPALDLARQAYEAFKARGLNLNMQRGQPADADF-DLSNGLLTVLGAEDVRM-DGLDLRNYPGGVAGLPSARALFAGY   82 (423)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHTCCEESCCCCCCHHHH-HTTGGGGGSCCGGGCEE-TTEETTSSCSCTTCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCCceEecCCCCCChHhC-CCcHHHHHHHhhhHHhh-cchhhhCCCCCCCChHHHHHHHHHH
Confidence            45667778889998888888889999999999   5 55668888875  5555 33345899 9999999999999999


Q ss_pred             H
Q psy782           86 Y   86 (100)
Q Consensus        86 ~   86 (100)
                      +
T Consensus        83 ~   83 (423)
T 3ez1_A           83 L   83 (423)
T ss_dssp             T
T ss_pred             h
Confidence            7

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=98.62  E-value=2.9e-09  Score=74.61  Aligned_cols=75  Identities=20%  Similarity=0.116  Sum_probs=56.5

Q ss_pred             hhhcccchhHHHHHHHhhcCCCceecCCCCCCCC-Cch-HHHHHHH--HHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           12 PRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYE-SAP-SHVSKGL--ADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        12 ~r~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~-~pp-~~l~~a~--~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ..+.....+.++.+.++.....+|+|+.|.|+++ +|. +.+.+++  .+++.......++|++..|+++||++||+++
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~   91 (427)
T 3ppl_A           13 ERIGLFHEDIKRKFDELKSKNLKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLL   91 (427)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCCEECCCCSCCHHHHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHH
T ss_pred             HHHHHhHHHHHHHHHHhhcCCceEecCCCCCChHHCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHh
Confidence            4444455666677666777778999999999985 332 3677777  6666554445689999999999999999998

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=98.60  E-value=5.3e-08  Score=67.13  Aligned_cols=83  Identities=16%  Similarity=0.071  Sum_probs=50.4

Q ss_pred             hhcccchhHHHHHHHhh---cCCCceecCCCC---CCCC-CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHH
Q psy782           13 RFEASVYSVWVEFIQLS---LDHKPLNLGQGF---PDYE-SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKL   85 (100)
Q Consensus        13 r~~~~~~~~~~~~~~~~---~~~~~i~l~~G~---P~~~-~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~   85 (100)
                      ++..+..+.+..+....   ...++|+|+.|.   |+.. ++++.+.+++.+.+...  ..++|++..|.++||++||++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~~la~~   81 (396)
T 2q7w_A            4 NITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE--TTKNYLGIDGIPEFGRCTQEL   81 (396)
T ss_dssp             TCCCCCC-----------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHC--CCCCCCCTTCCHHHHHHHHHH
T ss_pred             ccccCCCchHHHHHHHHhccCCCCceecccccccCCCCCccCcHHHHHHHHhhcCcc--cccCCCCCCCCHHHHHHHHHH
Confidence            34445555554443322   224789999998   4432 45588999998887653  367899999999999999999


Q ss_pred             HhhhhCCCCCCC
Q psy782           86 YSSLIERPLLPH   97 (100)
Q Consensus        86 ~~~~~g~~~~~~   97 (100)
                      +....+..++++
T Consensus        82 ~~~~~~~~~~~~   93 (396)
T 2q7w_A           82 LFGKGSALINDK   93 (396)
T ss_dssp             HHCTTCHHHHTT
T ss_pred             HhcCCCCccccc
Confidence            965433323444

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=98.59  E-value=1.5e-07  Score=64.89  Aligned_cols=75  Identities=20%  Similarity=0.075  Sum_probs=56.8

Q ss_pred             hcccchhHHHHHHHhhc---CCCceecCCC---CCCCCCch--HHHHHHHHH-HHhcCCcccCCCCCCCCCHHHHHHHHH
Q psy782           14 FEASVYSVWVEFIQLSL---DHKPLNLGQG---FPDYESAP--SHVSKGLAD-AATGENKLLNQYTRGFGHPRIVQAIAK   84 (100)
Q Consensus        14 ~~~~~~~~~~~~~~~~~---~~~~i~l~~G---~P~~~~pp--~~l~~a~~~-~~~~~~~~~~~Y~~~~G~~~LR~aia~   84 (100)
                      +.....+.+..+.+...   ..++|+|++|   +|+. .+|  +.+.+++.+ ++...  ..++|++..|.++||++||+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~y~d~~~-~~~~~~~v~~a~~~~~~~~~--~~~~y~~~~g~~~lr~~la~   81 (397)
T 3fsl_A            5 VDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDG-IIPQLQAVAEAEARLNAQPH--GASLYLPMEGLNCYRHAIAP   81 (397)
T ss_dssp             CCCCCCCHHHHHHHHHHTCCCSCCEECSSCCCCCTTS-CCCCCHHHHHHHHHHHHSCC--CCCCCCCTTCCHHHHHHHHH
T ss_pred             CCCCCCCchhhHHHHHhcCCCCCeEEEeeeEEECCCC-CccCcHHHHHHHHhhccCcc--ccccCCCCCchHHHHHHHHH
Confidence            44555666666655432   3579999999   5776 444  899999999 88764  36789999999999999999


Q ss_pred             HHhhhhC
Q psy782           85 LYSSLIE   91 (100)
Q Consensus        85 ~~~~~~g   91 (100)
                      ++...++
T Consensus        82 ~~~~~~~   88 (397)
T 3fsl_A           82 LLFGADH   88 (397)
T ss_dssp             HHHCTTC
T ss_pred             HHhcCCc
Confidence            9976544

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=98.58  E-value=1.1e-07  Score=65.98  Aligned_cols=84  Identities=15%  Similarity=0.234  Sum_probs=58.5

Q ss_pred             CChhhcccch-hHHHHHHH----hh---cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCC--cccCCCCCCCCCHHHH
Q psy782           10 LPPRFEASVY-SVWVEFIQ----LS---LDHKPLNLGQGFPDYESAPSHVSKGLADAATGEN--KLLNQYTRGFGHPRIV   79 (100)
Q Consensus        10 ~s~r~~~~~~-~~~~~~~~----~~---~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~--~~~~~Y~~~~G~~~LR   79 (100)
                      ++.++..+.. ..+..+.+    ..   ...++|+|+.|.+++ ++++.+.+++.+.++...  ...++|++..|.++||
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr   81 (400)
T 3asa_A            3 RNPHFVSLTKNYLFADLQKRVAQFRLENPQHTVINLSIGDTTQ-PLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALR   81 (400)
T ss_dssp             CCHHHHTCCCCCHHHHHHHHHHHHHHHCTTSCCEECSSCCCCC-CCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHH
T ss_pred             cchhhhccCCcccHHHHHHHHHHhhhhcCCCceEeccCCCCCC-CCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHH
Confidence            4677766554 33443332    22   135789999999988 777888888888876421  1246898889999999


Q ss_pred             HHHHHHHhhhhCCCCCCC
Q psy782           80 QAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        80 ~aia~~~~~~~g~~~~~~   97 (100)
                      ++||+++.  +|+ ++++
T Consensus        82 ~~la~~l~--~g~-~~~~   96 (400)
T 3asa_A           82 QKLSEDFY--RGF-VDAK   96 (400)
T ss_dssp             HHHHHTTS--TTS-SCGG
T ss_pred             HHHHHHHH--cCC-CCHH
Confidence            99999975  464 5554

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=98.57  E-value=1.2e-07  Score=66.48  Aligned_cols=63  Identities=24%  Similarity=0.351  Sum_probs=52.3

Q ss_pred             CCceecCCCCCCC--C-CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCC
Q psy782           32 HKPLNLGQGFPDY--E-SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        32 ~~~i~l~~G~P~~--~-~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~   97 (100)
                      .++|+|+.|.|+.  . ++++.+.+++.+.+...  ..++|++..|.++||++||+++... |..++++
T Consensus        54 ~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~~la~~~~~~-~~~~~~~  119 (427)
T 3dyd_A           54 KTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSG--KYNGYAPSIGFLSSREEIASYYHCP-EAPLEAK  119 (427)
T ss_dssp             SCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHC--CSSSCCCTTCCHHHHHHHHHHHCBT-TBCCCGG
T ss_pred             CCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcC--cCCCCCCCCCcHHHHHHHHHHHhhc-CCCCChH
Confidence            3689999999973  1 67799999999988765  3578999999999999999999875 7777665

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=98.54  E-value=1.1e-08  Score=71.16  Aligned_cols=75  Identities=17%  Similarity=0.096  Sum_probs=45.5

Q ss_pred             CCChhhcccchhHHHHHHH-hh--cCCCceecCCCCC-CCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHH
Q psy782            9 ALPPRFEASVYSVWVEFIQ-LS--LDHKPLNLGQGFP-DYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAK   84 (100)
Q Consensus         9 ~~s~r~~~~~~~~~~~~~~-~~--~~~~~i~l~~G~P-~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~   84 (100)
                      .++.++....++.+..+.+ ..  ...++|+|++|.| ++ .++..+.+++.++...   ..++|++..|.++||++||+
T Consensus        15 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~-~~~~~v~~a~~~a~~~---~~~~y~~~~g~~~lr~~ia~   90 (409)
T 4eu1_A           15 QTQGPGSMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDD-ADQPFVLECVKQATLG---TNMDYAPVTGIASFVEEAQK   90 (409)
T ss_dssp             ------------CHHHHHHHHHHCCCSSCEECCCSSCCCT-TSCCCCCHHHHTCCCC---SCCCCCCTTCCHHHHHHHHH
T ss_pred             hHhhcCCCCCCChHHHHHHHHhhCCCcCceeeeeeEEECC-CCCEeecHHHHhcCcc---ccccCCCCCCcHHHHHHHHH
Confidence            3567777777775433333 32  2357999999998 88 5555566666665333   36899999999999999999


Q ss_pred             HHh
Q psy782           85 LYS   87 (100)
Q Consensus        85 ~~~   87 (100)
                      ++.
T Consensus        91 ~~~   93 (409)
T 4eu1_A           91 LCF   93 (409)
T ss_dssp             HHH
T ss_pred             HHc
Confidence            983

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=98.52  E-value=1.8e-08  Score=70.64  Aligned_cols=76  Identities=16%  Similarity=0.138  Sum_probs=51.7

Q ss_pred             CChhhcccchhHHHHHHHhhcCCCceecCCCCCC---CCCchHHHHHHHHHHH-hcCCcccCCCCCCCCCHHHHHHHHHH
Q psy782           10 LPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPD---YESAPSHVSKGLADAA-TGENKLLNQYTRGFGHPRIVQAIAKL   85 (100)
Q Consensus        10 ~s~r~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~---~~~pp~~l~~a~~~~~-~~~~~~~~~Y~~~~G~~~LR~aia~~   85 (100)
                      .+.++......++..+.++..+.++|+|+.|.|+   + ++++.+.+++.+.+ .......++|++..|.++||++||++
T Consensus        10 ~~~~l~~~~~~~~~~~~~l~~~~~~i~l~~g~~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~   88 (422)
T 3d6k_A           10 DAARLAQVREEVTAKYAELKAKNLSLDLTRGKPSAEQL-DLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEA   88 (422)
T ss_dssp             --------CHHHHHHHHHHHHTTCCEECCCCSCCHHHH-HTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHH
T ss_pred             CHHHHHhhHHHHHHHHHHHhccCCeEeCCCCCCChhhC-CCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHH
Confidence            4566666677777777776666679999999998   6 55667777766543 11212357899999999999999999


Q ss_pred             H
Q psy782           86 Y   86 (100)
Q Consensus        86 ~   86 (100)
                      +
T Consensus        89 ~   89 (422)
T 3d6k_A           89 L   89 (422)
T ss_dssp             H
T ss_pred             h
Confidence            8

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=98.52  E-value=3.7e-08  Score=68.65  Aligned_cols=68  Identities=16%  Similarity=0.160  Sum_probs=50.8

Q ss_pred             CCCceecCCCCCCCCCchHHHHHHHHHHHh-cCCcccCCCCCCCCC-----HHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           31 DHKPLNLGQGFPDYESAPSHVSKGLADAAT-GENKLLNQYTRGFGH-----PRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        31 ~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~-~~~~~~~~Y~~~~G~-----~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      ..++|+|+.|.|++ ++|+.+.+++.+... .......+|++..|.     ++||++||+++.. +|+.++++.+|
T Consensus        21 ~~~~i~l~~g~p~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~i   94 (391)
T 3bwn_A           21 SDFVVNLDHGDPTA-YEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHGV-VGNAATEDRYI   94 (391)
T ss_dssp             TTSCEECSSCCCGG-GHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHHH-HCSBCCSSSEE
T ss_pred             CCCeeEcCCCCCCC-CCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHHh-cCCCCCCCCeE
Confidence            45789999999999 777777776643332 111135789999999     9999999999984 69888774243

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=98.51  E-value=1.3e-07  Score=64.67  Aligned_cols=61  Identities=25%  Similarity=0.246  Sum_probs=53.8

Q ss_pred             CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCC
Q psy782           31 DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        31 ~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~   97 (100)
                      ..++|+|+.|.+++ .+++.+.+++.+.+.+.   .++|++ .| .+||++||+++.+.+|+.++++
T Consensus        22 g~~~idl~~~~~~~-~~~~~v~~a~~~~~~~~---~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~   82 (377)
T 3fdb_A           22 GQGVLPLWVAESDF-STCPAVLQAITDAVQRE---AFGYQP-DG-SLLSQATAEFYADRYGYQARPE   82 (377)
T ss_dssp             CTTSEECCSSCCCS-CCCHHHHHHHHHHHHTT---CCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGG
T ss_pred             CCCeeeecccCCCC-CCCHHHHHHHHHHHHcC---CCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHH
Confidence            45799999999999 88899999999998875   678998 88 9999999999998889887766

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=98.50  E-value=6.1e-08  Score=68.48  Aligned_cols=64  Identities=9%  Similarity=-0.090  Sum_probs=51.4

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCC-C---CHHHHHHHHHHHhhhhCCCCCCC
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGF-G---HPRIVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~-G---~~~LR~aia~~~~~~~g~~~~~~   97 (100)
                      .+|+|+.|+|++ .+++.+.+++.+++...+....+|++.. |   .++||++||+++.+.++..++++
T Consensus        57 ~~i~l~~g~~~~-~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~  124 (427)
T 2hox_A           57 CSADVASGDGLF-LEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDR  124 (427)
T ss_dssp             CCEECCSCCCGG-GHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTC
T ss_pred             ceEEecCcCCCC-CCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCC
Confidence            589999999999 8888999998887743321223599998 9   99999999999988766667776

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=98.49  E-value=3.5e-07  Score=63.57  Aligned_cols=76  Identities=16%  Similarity=0.219  Sum_probs=57.0

Q ss_pred             hhHHHHHHHhhc----CCCceecCCCCCC----CCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhh--
Q psy782           19 YSVWVEFIQLSL----DHKPLNLGQGFPD----YESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSS--   88 (100)
Q Consensus        19 ~~~~~~~~~~~~----~~~~i~l~~G~P~----~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~--   88 (100)
                      .+.++.+.....    ..++|+|+.|.|+    + ++++.+.+++.+.+...  ..++|++..|..+||++||+++.+  
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~-~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~lr~~la~~~~~~~   92 (416)
T 1bw0_A           16 FNPIRTVSDNAKPSPSPKPIIKLSVGDPTLDKNL-LTSAAQIKKLKEAIDSQ--ECNGYFPTVGSPEAREAVATWWRNSF   92 (416)
T ss_dssp             CCHHHHHHHTCCCCCSCSCCEECCCCCTTTTSCS-CCCHHHHHHHHHHHHTT--CSSSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHhhcCCCeEEecCcCCCcccCC-CCCHHHHHHHHHHhhCC--ccCCcCCCCCCHHHHHHHHHHHHhhh
Confidence            344555555332    2468999999984    4 77899999999988764  357899889999999999999982  


Q ss_pred             ----hhCCCCCCC
Q psy782           89 ----LIERPLLPH   97 (100)
Q Consensus        89 ----~~g~~~~~~   97 (100)
                          .+|+.++++
T Consensus        93 ~~~~~~~~~~~~~  105 (416)
T 1bw0_A           93 VHKEELKSTIVKD  105 (416)
T ss_dssp             CCSTTTGGGCCGG
T ss_pred             cccccCCCCCCcc
Confidence                246666665

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=98.48  E-value=2.7e-07  Score=64.26  Aligned_cols=57  Identities=16%  Similarity=0.046  Sum_probs=46.1

Q ss_pred             CCceecCCCCC-----CCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCC
Q psy782           32 HKPLNLGQGFP-----DYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIER   92 (100)
Q Consensus        32 ~~~i~l~~G~P-----~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~   92 (100)
                      .++|+|++|.|     ++ .+++.+.+++.+.....   ..+|++..|.++||++|++++...++.
T Consensus        38 ~~~i~l~~g~~~~~~~~~-~~~~~v~~a~~~~~~~~---~~~y~~~~g~~~lr~~ia~~~~~~~~~   99 (418)
T 3rq1_A           38 ENVVNGTLGAIHDEEGNL-VFLKTVKEEYLSLSDSE---HVGYAPIAGIPDFLCAAEKECFGNFRP   99 (418)
T ss_dssp             GGCEECCSSCCBCTTSCB-CCCHHHHHHHHTCCHHH---HHSCCCTTCCHHHHHHHHHHHHGGGCC
T ss_pred             CCeEECCCCcccCCCCCc-cccHHHHHHHHHhcccc---cCCCCCCCChHHHHHHHHHHHhcccCc
Confidence            47999999998     55 77788988887654433   578999999999999999999776553

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=98.39  E-value=1.7e-06  Score=59.27  Aligned_cols=61  Identities=13%  Similarity=0.107  Sum_probs=52.6

Q ss_pred             CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCC
Q psy782           31 DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        31 ~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~   97 (100)
                      ..++|+|+.|.|++ .+++.+.+++.+.+.+.   .++|++  |..+||+++++++.+.+|+.++++
T Consensus        31 ~~~~i~l~~~~~~~-~~~~~v~~a~~~~~~~~---~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~   91 (391)
T 4dq6_A           31 TNDLLPMWVADMDF-KAAPCIIDSLKNRLEQE---IYGYTT--RPDSYNESIVNWLYRRHNWKIKSE   91 (391)
T ss_dssp             CSCSEECCSSSCSS-CCCHHHHHHHHHHHTTC---CCCCBC--CCHHHHHHHHHHHHHHHCCCCCGG
T ss_pred             CCCceeccccCCCC-CCCHHHHHHHHHHHhCC---CCCCCC--CCHHHHHHHHHHHHHHhCCCCcHH
Confidence            46899999999999 88899999999988765   667865  679999999999999889776665

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=98.39  E-value=9.6e-07  Score=62.47  Aligned_cols=78  Identities=22%  Similarity=0.198  Sum_probs=53.0

Q ss_pred             CCChhhcccchhHHHHHHH-hhc--CCCceecCCCCC-CCC-Cch--HHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHH
Q psy782            9 ALPPRFEASVYSVWVEFIQ-LSL--DHKPLNLGQGFP-DYE-SAP--SHVSKGLADAATGENKLLNQYTRGFGHPRIVQA   81 (100)
Q Consensus         9 ~~s~r~~~~~~~~~~~~~~-~~~--~~~~i~l~~G~P-~~~-~pp--~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~a   81 (100)
                      .+..++.....+.+..+.+ +..  .+++|+|++|.| |+. .|+  +.+.+++.+.........++|.+..|.++||++
T Consensus        23 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~  102 (448)
T 3meb_A           23 SVFSGFPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEA  102 (448)
T ss_dssp             CTTTTCCCCCCCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHH
T ss_pred             hHHhcCCCCCCChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHHH
Confidence            3455666666654444433 322  345799999999 764 322  778887776652222236789999999999999


Q ss_pred             HHHHH
Q psy782           82 IAKLY   86 (100)
Q Consensus        82 ia~~~   86 (100)
                      ||+++
T Consensus       103 ia~~l  107 (448)
T 3meb_A          103 AQFLM  107 (448)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            99998

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=98.39  E-value=4e-07  Score=65.45  Aligned_cols=76  Identities=14%  Similarity=0.077  Sum_probs=54.0

Q ss_pred             hhHHHHHHHhhcCCCceecCCCCCCCCCchHHHHHHHHHHHhcCC-cccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCC
Q psy782           19 YSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGEN-KLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        19 ~~~~~~~~~~~~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~-~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~   97 (100)
                      .+.++.+..+...+++|+|+.| |.. +|++.+.++ .+++...+ ....+|++..|.++||++||+++.+.+|+.++++
T Consensus        82 ~~~~~~~~~~~~~p~~i~~~~~-~~~-~p~~~~~~a-~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~  158 (500)
T 3tcm_A           82 VTFFREVLALCDHPDLLQREEI-KTL-FSADSISRA-KQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANAD  158 (500)
T ss_dssp             CHHHHHHHHHHHSGGGGGCTTH-HHH-SCHHHHHHH-HHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGG
T ss_pred             CcHHHHHHHhhcCcccccCCCC-ccc-CCHHHHHHH-HHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcc
Confidence            3445555555566667777776 444 555555554 56666532 1467899999999999999999988889888776

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=98.38  E-value=7.7e-07  Score=61.02  Aligned_cols=60  Identities=10%  Similarity=0.008  Sum_probs=52.5

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCC
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~   97 (100)
                      .++|+|+.|.|++ ++++.+.+++.+.+.+.   .++|++.  ..+||+++++++.+.+|++++++
T Consensus        27 ~~~i~~~~~~~~~-~~~~~v~~a~~~~~~~~---~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~   86 (391)
T 3dzz_A           27 EKELPMWIAEMDF-KIAPEIMASMEEKLKVA---AFGYESV--PAEYYKAVADWEEIEHRARPKED   86 (391)
T ss_dssp             TTCEECCSSCCSS-CCCHHHHHHHHHHHTTC---CCCCBCC--CHHHHHHHHHHHHHHHSCCCCGG
T ss_pred             CCceeccccCCCC-CCCHHHHHHHHHHHhcC---cCCCCCC--CHHHHHHHHHHHHHHhCCCCCHH
Confidence            4799999999999 88899999999998775   6788766  69999999999999889777665

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=98.37  E-value=3.5e-07  Score=63.12  Aligned_cols=62  Identities=15%  Similarity=0.187  Sum_probs=52.1

Q ss_pred             CceecCCCCCC-CCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCC
Q psy782           33 KPLNLGQGFPD-YESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        33 ~~i~l~~G~P~-~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~   97 (100)
                      .+|+|+.|+|+ + ++++.+.+++.+.+...  ...+|++..|..+||+++++++.+.+|++++++
T Consensus        40 ~~id~~~g~~~~~-~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~  102 (407)
T 3nra_A           40 RPVDFSHGDVDAH-EPTPGAFDLFSAGVQSG--GVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDAR  102 (407)
T ss_dssp             CCEETTSCCTTTS-CCCTTHHHHHHHHHHHT--HHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTT
T ss_pred             ceeeecCcCCCCC-CCcHHHHHHHHHHHhcC--CCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Confidence            37999999998 4 56688999999888764  245799999999999999999999889887663

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=98.31  E-value=9.5e-07  Score=60.86  Aligned_cols=60  Identities=15%  Similarity=0.158  Sum_probs=49.7

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHH-HHHHHHHHHhhhhCCCCCCC
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPR-IVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~-LR~aia~~~~~~~g~~~~~~   97 (100)
                      .++|+|+.|.+++ .+++.+.+++.+.+...   ..+|++.  .++ ||++||+++.+.+|+.++++
T Consensus        28 ~~~i~l~~~~~~~-~~~~~v~~a~~~~~~~~---~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~   88 (390)
T 1d2f_A           28 ADLLPFTISDMDF-ATAPCIIEALNQRLMHG---VFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQ   88 (390)
T ss_dssp             --CEECCSSSCSS-CCCHHHHHHHHHHHTTC---CCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGG
T ss_pred             CCeeEeeecCCCC-CCCHHHHHHHHHHHhCC---CCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHH
Confidence            4689999999988 78899999999988754   6789765  788 99999999988788777665

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=98.29  E-value=1.3e-06  Score=59.85  Aligned_cols=62  Identities=11%  Similarity=0.121  Sum_probs=50.8

Q ss_pred             ceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCC
Q psy782           34 PLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        34 ~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~   97 (100)
                      .|+|+.|.+++ .+++.+.+++.+.++.......+|+...| .+||++||+++.+.+|+.++++
T Consensus        32 ~idl~~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~   93 (369)
T 3cq5_A           32 DIRLNTNENPY-PPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRD   93 (369)
T ss_dssp             SEECSSCCCCS-CCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGG
T ss_pred             ceeccCCCCCC-CCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChH
Confidence            49999999988 78889999999888663223578987766 8999999999998888877665

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=98.28  E-value=1.5e-06  Score=59.97  Aligned_cols=60  Identities=12%  Similarity=0.161  Sum_probs=51.0

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCC
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~   97 (100)
                      .++|+|+.|.+++ .+++.+.+++.+.+...   ..+|++.  ..+||++||+++.+.+|++++++
T Consensus        31 ~~~i~l~~~~~~~-~~~~~v~~a~~~~~~~~---~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~   90 (399)
T 1c7n_A           31 NEVVPLSVADMEF-KNPPELIEGLKKYLDET---VLGYTGP--TEEYKKTVKKWMKDRHQWDIQTD   90 (399)
T ss_dssp             TTCCCCCSSSCSS-CCCHHHHHHHHHHHHHC---CCSSBCC--CHHHHHHHHHHHHHHHCCCCCGG
T ss_pred             CCceeeeecCCCC-CCCHHHHHHHHHHHhcC---CCCCCCC--cHHHHHHHHHHHHHHhCCCCChh
Confidence            4789999999988 88899999999988764   6789764  89999999999988788766665

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=98.25  E-value=3.6e-06  Score=57.94  Aligned_cols=73  Identities=14%  Similarity=0.128  Sum_probs=53.3

Q ss_pred             hhcccchhHHHHHHHhh---cCCCceecCCCCC---CCC-CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHH
Q psy782           13 RFEASVYSVWVEFIQLS---LDHKPLNLGQGFP---DYE-SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKL   85 (100)
Q Consensus        13 r~~~~~~~~~~~~~~~~---~~~~~i~l~~G~P---~~~-~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~   85 (100)
                      ++.....+.+..+.+..   ...++|+|+.|.|   +.. ++++.+.+++.+.++..  ..++|++..|.++||++||++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~~la~~   81 (394)
T 2ay1_A            4 NLKPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETE--TTKTYAGLSGEPEFQKAMGEL   81 (394)
T ss_dssp             GCCCCCCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHC--CCCCCCCSSCCHHHHHHHHHH
T ss_pred             cCccCCCccHHHHHHHHHhCCCccccccccceeeCCCCCccCcHHHHHHHHHhcCCc--ccCCCCCCCCcHHHHHHHHHH
Confidence            44555555555555432   2357899999986   322 45689999998887653  367899999999999999999


Q ss_pred             Hh
Q psy782           86 YS   87 (100)
Q Consensus        86 ~~   87 (100)
                      +.
T Consensus        82 ~~   83 (394)
T 2ay1_A           82 IL   83 (394)
T ss_dssp             HH
T ss_pred             Hh
Confidence            84

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=98.23  E-value=3.4e-07  Score=64.00  Aligned_cols=73  Identities=8%  Similarity=-0.011  Sum_probs=51.7

Q ss_pred             hHHHHHHHhhcCCCceecCCCCC-CCCCchHHH--HHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCC
Q psy782           20 SVWVEFIQLSLDHKPLNLGQGFP-DYESAPSHV--SKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLP   96 (100)
Q Consensus        20 ~~~~~~~~~~~~~~~i~l~~G~P-~~~~pp~~l--~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~   96 (100)
                      +.+..+.... ..++|+|+.|.| ++ .+++.+  .+++.+.+...  ..++|++..|.++||++||+++.+. ++.+++
T Consensus        36 ~~~~~~~~~~-~~~~i~l~~g~~~~~-~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~~~~~-~~~~~~  110 (430)
T 2x5f_A           36 KGILSQSAEA-KSTTYNATIGMATNK-DGKMFASSLDAMFNDLTPD--EIFPYAPPQGIEELRDLWQQKMLRD-NPELSI  110 (430)
T ss_dssp             CHHHHHHHHT-TTCSEECCCSSCEET-TEECCCHHHHTTBSSCCGG--GTSSCCCTTCCHHHHHHHHHHHHHH-CTTCCG
T ss_pred             hHHHHHHHhc-CCCcEEeeeeeccCC-CCchhhHHHHHHHHhcCcc--cccccCCCCCCHHHHHHHHHHHhcc-CcccCC
Confidence            4444443333 457999999999 88 555545  66655554431  2678999999999999999999876 566666


Q ss_pred             C
Q psy782           97 H   97 (100)
Q Consensus        97 ~   97 (100)
                      +
T Consensus       111 ~  111 (430)
T 2x5f_A          111 D  111 (430)
T ss_dssp             G
T ss_pred             C
Confidence            5

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=98.18  E-value=4.1e-06  Score=58.51  Aligned_cols=61  Identities=8%  Similarity=0.062  Sum_probs=52.0

Q ss_pred             CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCC
Q psy782           31 DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        31 ~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~   97 (100)
                      ..++|+|++|++++ .+++.+.+++.+.+...   .++|+...  .+|++++++++.+.+|.+++++
T Consensus        60 g~~~i~~~~~~~~~-~~~~~v~~a~~~~~~~~---~~~y~~~~--~~l~~~l~~~l~~~~g~~~~~~  120 (421)
T 3l8a_A           60 NPELLQMWVADMDF-LPVPEIKEAIINYGREH---IFGYNYFN--DDLYQAVIDWERKEHDYAVVKE  120 (421)
T ss_dssp             CTTCEECCSSCCCS-CCCHHHHHHHHHHHHHC---CSSCBCCC--HHHHHHHHHHHHHHHCCCCCGG
T ss_pred             CCCeeecccCCCCC-CCCHHHHHHHHHHHhcC---CcCCCCCC--HHHHHHHHHHHHHHhCCCCCHH
Confidence            45799999999999 88899999999988765   67887653  9999999999999889777665

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=97.48  E-value=2.2e-07  Score=64.23  Aligned_cols=60  Identities=17%  Similarity=0.095  Sum_probs=50.8

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCC
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~   97 (100)
                      .++|+|+.|+|++ .+++.+.+++.+.+...   .++|++.  ..+||++||+++.+.+|+.++++
T Consensus        31 ~~~i~l~~~~~~~-~~~~~v~~a~~~~~~~~---~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~   90 (392)
T 3b1d_A           31 PQLLPAWIADMDF-EVMPEVKQAIHDYAEQL---VYGYTYA--SDELLQAVLDWEKSEHQYSFDKE   90 (392)
Confidence            3789999999999 88899999999888664   6789765  89999999999988778766665

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=98.11  E-value=2.9e-06  Score=61.02  Aligned_cols=67  Identities=15%  Similarity=0.131  Sum_probs=38.4

Q ss_pred             CceecCCCCCCCC--Cc----------------------hHHHHHHHHHHHhcCC-cccCCCCCCCCCHHHHHHHHHHHh
Q psy782           33 KPLNLGQGFPDYE--SA----------------------PSHVSKGLADAATGEN-KLLNQYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus        33 ~~i~l~~G~P~~~--~p----------------------p~~l~~a~~~~~~~~~-~~~~~Y~~~~G~~~LR~aia~~~~   87 (100)
                      .+|.+.+|+|..-  .|                      |..+.+++.+++++.. ....+|++..|.++||++||+++.
T Consensus        64 ~~i~~nig~p~~~~~~~~~~~r~~l~l~~~p~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~  143 (498)
T 3ihj_A           64 EVIRANIGDAQAMGQQPITFLRQVMALCTYPNLLDSPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYIT  143 (498)
T ss_dssp             SCBCCC----------CCHHHHHHHHHHHCGGGGGCSSSCHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHH
T ss_pred             hhhhcCCcCcccccCCcchHHHHHHHHhcCccccCcccCCHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            6899999999431  23                      4444455577776532 135789999999999999999998


Q ss_pred             hhh-CCCCCCCCCC
Q psy782           88 SLI-ERPLLPHQLV  100 (100)
Q Consensus        88 ~~~-g~~~~~~~eI  100 (100)
                      +.+ |++++++ +|
T Consensus       144 ~~~gG~~~~~~-~i  156 (498)
T 3ihj_A          144 RRDGGVPADPD-NI  156 (498)
T ss_dssp             HHTTTCCCCGG-GE
T ss_pred             HhcCCCCCCcc-cE
Confidence            877 4888776 53

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=98.00  E-value=4.2e-06  Score=57.12  Aligned_cols=54  Identities=15%  Similarity=0.273  Sum_probs=44.7

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHh
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   87 (100)
                      .++|+|+.|.|++ .+++.+.+++.+.+...+....+|+.. |..+||++||+++.
T Consensus        26 ~~~i~l~~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~y~~~-~~~~lr~~la~~~g   79 (360)
T 3hdo_A           26 ASWIKLNTNENPY-PPSPEVVKAILEELGPDGAALRIYPSA-SSQKLREVAGELYG   79 (360)
T ss_dssp             TTSEECSSCCCSS-CCCHHHHHHHHHHHTTTCGGGGSCCCS-SCHHHHHHHHHHHT
T ss_pred             cceeeccCCCCCC-CCCHHHHHHHHHHHhcccchhhcCCCC-chHHHHHHHHHHhC
Confidence            4689999999999 888999999999887643335678654 77999999999883

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=97.90  E-value=7.1e-05  Score=50.94  Aligned_cols=50  Identities=14%  Similarity=0.203  Sum_probs=43.4

Q ss_pred             CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           31 DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        31 ~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ..++|+|+.|.+.+ .+++.+.+++.+.+..    ..+|++..| .+||++||+++
T Consensus        29 ~~~~i~l~~~~~~~-~~~~~v~~a~~~~~~~----~~~y~~~~~-~~lr~~la~~~   78 (365)
T 3get_A           29 VKEVIKLASNENPF-GTPPKAIECLRQNANK----AHLYPDDSM-IELKSTLAQKY   78 (365)
T ss_dssp             CSCCEECSSCCCTT-CSCHHHHHHHHHHGGG----TTSCCCTTC-HHHHHHHHHHH
T ss_pred             CCceEEecCCCCCC-CCCHHHHHHHHHHHHh----hccCCCCCh-HHHHHHHHHHh
Confidence            36799999999999 8889999999988763    678988877 99999999987

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=97.67  E-value=6.8e-05  Score=50.80  Aligned_cols=49  Identities=16%  Similarity=0.158  Sum_probs=41.7

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      .++|+|+.|.|.+ .+++.+.+++.+.+ ..   ..+|++..| .+||++||+++
T Consensus        15 ~~~id~~~~~~~~-~~~~~v~~a~~~~~-~~---~~~y~~~~~-~~lr~~la~~~   63 (350)
T 3fkd_A           15 SEIVNFSTTVWTD-GDKDHLEKHLVENL-NC---IRHYPEPDA-GTLRQMLAKRN   63 (350)
T ss_dssp             -CCEECSCCSCCC-SCCHHHHHHHHHTG-GG---GGSCCCTTC-HHHHHHHHHHT
T ss_pred             ccEEEccCCCCCC-CCCHHHHHHHHHhH-hH---HhcCCCCcH-HHHHHHHHHHh
Confidence            5799999999999 88899999998877 33   678988877 99999999987

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=97.67  E-value=5.4e-05  Score=52.16  Aligned_cols=59  Identities=14%  Similarity=0.059  Sum_probs=47.5

Q ss_pred             CceecCCCCC-CCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCC
Q psy782           33 KPLNLGQGFP-DYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIER   92 (100)
Q Consensus        33 ~~i~l~~G~P-~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~   92 (100)
                      ++|+|+.|.| ++ ++++.+.+++.+.+........+|....|.+++++++++++++.+|.
T Consensus        44 ~~idl~~~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~  103 (398)
T 3a2b_A           44 RVLMFGSNSYLGL-TTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGK  103 (398)
T ss_dssp             EEEECSCSCTTCG-GGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC
T ss_pred             eEEEeecccccCC-CCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC
Confidence            4799999998 55 68899999999888764222345777889999999999999988775

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=97.65  E-value=4.6e-05  Score=51.48  Aligned_cols=53  Identities=9%  Similarity=0.149  Sum_probs=43.0

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhh
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSS   88 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~   88 (100)
                      .++|+|+.|.+++ .+++.+.+++.+.+...  ..++|+. .|.++||++||+++.+
T Consensus        19 ~~~i~l~~~~~~~-~~~~~v~~a~~~~~~~~--~~~~y~~-~~~~~lr~~la~~~~~   71 (335)
T 1uu1_A           19 RDKTYLALNENPF-PFPEDLVDEVFRRLNSD--ALRIYYD-SPDEELIEKILSYLDT   71 (335)
T ss_dssp             CCSEEESSCCCSS-CCCHHHHHHHHHTCCGG--GGGSCCC-SSCHHHHHHHHHHHTC
T ss_pred             CcceECCCCCCCC-CCCHHHHHHHHHHhhhh--hhhcCCC-CchHHHHHHHHHHcCC
Confidence            3689999999988 77889999998887432  2567865 4899999999999964

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=97.56  E-value=0.00019  Score=48.77  Aligned_cols=72  Identities=11%  Similarity=-0.010  Sum_probs=46.4

Q ss_pred             CChhhcccchhHH----HHHHHhhcCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHH
Q psy782           10 LPPRFEASVYSVW----VEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKL   85 (100)
Q Consensus        10 ~s~r~~~~~~~~~----~~~~~~~~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~   85 (100)
                      +..+++.+.....    ..+.+.....++|+|+.|.+.+ .+++.+.+++.+.+..    ...|+ ..|..+||++||++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~-~~~~~v~~a~~~~~~~----~~~y~-~~~~~~lr~~la~~   79 (363)
T 3ffh_A            6 WKKSLAGLSSYKPGKREEEVMAELGLTKITKLSSNENPL-GTSKKVAAIQANSSVE----TEIYP-DGWASSLRKEVADF   79 (363)
T ss_dssp             CCGGGTTCCC----CHHHHHHHTTTCSCCEECSSCSCTT-CCCHHHHHHHHTCBSC----CCBC-----CHHHHHHHHHH
T ss_pred             hhHHHHhCCCCCCCCCHHHHHHhcCCCceEEccCCCCCC-CCCHHHHHHHHHHHHH----hhcCC-CcchHHHHHHHHHH
Confidence            4555555544322    2222222335799999999988 8889999998876532    56674 57999999999999


Q ss_pred             Hh
Q psy782           86 YS   87 (100)
Q Consensus        86 ~~   87 (100)
                      +.
T Consensus        80 ~~   81 (363)
T 3ffh_A           80 YQ   81 (363)
T ss_dssp             HT
T ss_pred             hC
Confidence            84

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=97.53  E-value=0.00014  Score=49.53  Aligned_cols=51  Identities=18%  Similarity=0.197  Sum_probs=43.3

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      .++|+|+.|.+++ .+++.+.+++.+.+...  ..++|+. .|..+||++||+++
T Consensus        30 ~~~i~l~~~~~~~-~~~~~v~~a~~~~~~~~--~~~~y~~-~~~~~l~~~la~~~   80 (367)
T 3euc_A           30 HGLVKLDAMENPY-RLPPALRSELAARLGEV--ALNRYPV-PSSEALRAKLKEVM   80 (367)
T ss_dssp             TTCEECCSSCCCC-CCCHHHHHHHHHHHHHH--HTTCSCC-CCHHHHHHHHHHHH
T ss_pred             CCeeEccCCCCCC-CCCHHHHHHHHHHhhhh--hhhcCCC-CcHHHHHHHHHHHh
Confidence            4689999999988 88899999999988753  2678976 58999999999987

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=97.43  E-value=0.00021  Score=48.36  Aligned_cols=50  Identities=12%  Similarity=0.254  Sum_probs=40.8

Q ss_pred             CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           31 DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        31 ~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ..++|+|+.|.+.+ .+++.+.+++.+.+..    ..+| +..|..+||++||+++
T Consensus        25 ~~~~idl~~~~~~~-~~~~~v~~a~~~~~~~----~~~y-~~~~~~~l~~~la~~~   74 (361)
T 3ftb_A           25 GRELLDYSSNINPL-GIPKSFLNNIDEGIKN----LGVY-PDVNYRRLNKSIENYL   74 (361)
T ss_dssp             ---CEETTCCCCTT-CSCHHHHTTHHHHHHG----GGSC-CCTTCHHHHHHHHHHH
T ss_pred             CCCEEEecCCCCCC-CCCHHHHHHHHHHHHH----hcCC-CCccHHHHHHHHHHHh
Confidence            45799999999988 7889999999988865    3578 4579999999999998

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=97.30  E-value=0.00029  Score=49.07  Aligned_cols=63  Identities=14%  Similarity=0.174  Sum_probs=44.8

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHh--------cCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCC--CCCC
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAAT--------GENKLLNQYTRGFGHPRIVQAIAKLYSSLIERP--LLPH   97 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~--------~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~--~~~~   97 (100)
                      ++|+|+.+...+  +++.+.+++.+...        ..-....+|++..|..+||++||+++.+.+|..  ++++
T Consensus        37 ~~i~l~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~  109 (428)
T 1iay_A           37 GVIQMGLAENQL--CLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPE  109 (428)
T ss_dssp             SBEECSSCCCCS--SHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTT
T ss_pred             ceeeeccccchh--hHHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChh
Confidence            589999877555  34577777764321        000124679999999999999999998877865  5565

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=97.28  E-value=0.0001  Score=53.42  Aligned_cols=57  Identities=12%  Similarity=-0.013  Sum_probs=40.3

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhh-hC-CCCC
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSL-IE-RPLL   95 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~-~g-~~~~   95 (100)
                      ++|+|+.|.|++ .+|+.+.++.. .+..    ...|.+..|.++||++||+++.+. ++ +.++
T Consensus       104 ~~i~l~~g~~~~-~~~~~v~a~~~-~~~~----~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~  162 (533)
T 3f6t_A          104 DAVNYCHTELGL-NRDKVVAEWVN-GAVA----NNYPVPDRCLVNTEKIINYFLQELSYKDANLA  162 (533)
T ss_dssp             HHHHHHHHTTCC-CHHHHHHHHHH-HHHT----CSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCG
T ss_pred             hheeccCCCCCc-CCcHHHHHHHH-HHHh----CCCCCCcccHHHHHHHHHHHHHHhcCCCCCCC
Confidence            379999999999 66555555544 4442    222448899999999999999665 34 4554

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=97.23  E-value=0.00018  Score=48.65  Aligned_cols=50  Identities=12%  Similarity=0.102  Sum_probs=42.2

Q ss_pred             CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           31 DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        31 ~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ..++|+|+.|.+++ .+++.+.+++.+.+..    ..+|+ ..|.++||++||+++
T Consensus        15 ~~~~i~l~~~~~~~-~~~~~v~~a~~~~~~~----~~~y~-~~~~~~l~~~la~~~   64 (354)
T 3ly1_A           15 TDNPIRINFNENPL-GMSPKAQAAARDAVVK----ANRYA-KNEILMLGNKLAAHH   64 (354)
T ss_dssp             SSSCEECSSCCCSS-CCCHHHHHHHHHTGGG----TTSCC-HHHHHHHHHHHHHHT
T ss_pred             CCceEEccCCCCCC-CCCHHHHHHHHHHHhh----CcCCC-CCchHHHHHHHHHHh
Confidence            35689999999999 8889999999988763    56784 568999999999987

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=97.23  E-value=0.00053  Score=46.66  Aligned_cols=49  Identities=18%  Similarity=0.273  Sum_probs=40.9

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      .++|+|+.|.+++ .+++.+.+++.+.+..    .++|+. .|..+||++||+++
T Consensus        24 ~~~idl~~~~~~~-~~~~~v~~a~~~~~~~----~~~y~~-~~~~~l~~~la~~~   72 (364)
T 1lc5_A           24 DQLLDFSANINPL-GMPVSVKRALIDNLDC----IERYPD-ADYFHLHQALARHH   72 (364)
T ss_dssp             GGSEECSSCCCTT-CCCHHHHHHHHHTGGG----GGSCCC-TTCHHHHHHHHHHH
T ss_pred             cceEEeccccCCC-CCCHHHHHHHHHHHHH----hhcCCC-CCHHHHHHHHHHHH
Confidence            3589999999888 7788899999887753    467865 58999999999998

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=97.13  E-value=0.0008  Score=45.05  Aligned_cols=50  Identities=20%  Similarity=0.298  Sum_probs=41.4

Q ss_pred             CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           31 DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        31 ~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ..++|+|+.+.+.+ .+++.+.+++.+.+..    .++|+ ..|.++||++||+++
T Consensus        15 ~~~~i~l~~n~~~~-~~~~~v~~a~~~~~~~----~~~y~-~~~~~~lr~~la~~~   64 (337)
T 3p1t_A           15 AAQAVCLAFNENPE-AVEPRVQAAIAAAAAR----INRYP-FDAEPRVMRKLAEHF   64 (337)
T ss_dssp             CCCCEECSSCCCCS-CCCHHHHHHHHHHGGG----TTSCC-TTHHHHHHHHHHHHH
T ss_pred             CCCceEeeCCCCCC-CCCHHHHHHHHHhhhh----hccCC-CCchHHHHHHHHHHh
Confidence            34689999998777 7788899999887653    57894 679999999999987

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=96.84  E-value=0.00084  Score=46.75  Aligned_cols=47  Identities=17%  Similarity=0.108  Sum_probs=40.4

Q ss_pred             ecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCC-CCCCHHHHHHHHHHHhh
Q psy782           36 NLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTR-GFGHPRIVQAIAKLYSS   88 (100)
Q Consensus        36 ~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~-~~G~~~LR~aia~~~~~   88 (100)
                      +|+.|+|++ .+|+.+.+++.++++.+     .|+. ..|..+||++||+++..
T Consensus        20 ~l~~~~p~~-~~p~~~~~a~~~~~~~~-----~y~~~~~~~~~l~~~la~~~~~   67 (424)
T 2po3_A           20 PLLVGRPNR-IDRARLYERLDRALDSQ-----WLSNGGPLVREFEERVAGLAGV   67 (424)
T ss_dssp             CEETTCCCC-CCHHHHHHHHHHHHHHT-----CCSSSCHHHHHHHHHHHHHHTS
T ss_pred             cccccCCCC-CChHHHHHHHHHHHhcC-----CcccCCHHHHHHHHHHHHHhCC
Confidence            699999999 88889999999888653     4877 78999999999999854

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=96.82  E-value=0.0014  Score=45.54  Aligned_cols=53  Identities=9%  Similarity=0.178  Sum_probs=37.8

Q ss_pred             CCCCCCCCCc-hHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCC
Q psy782           38 GQGFPDYESA-PSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERP   93 (100)
Q Consensus        38 ~~G~P~~~~p-p~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~   93 (100)
                      +.|+|++ ++ ++.+.+++.++++..  ....|++..|.++|++++.+++++.+|++
T Consensus         5 ~~g~p~~-~~~~~~~~~a~~~~~~~~--~~~~~~~~~g~~~l~~~l~~~la~~~g~~   58 (418)
T 2c81_A            5 FDHWPEW-PQHSDRTRRKIEEVFQSN--RWAISGYWTGEESMERKFAKAFADFNGVP   58 (418)
T ss_dssp             ---CCCS-SCCCHHHHHHHHHHHHHT--CCSTTSBCCSSCCHHHHHHHHHHHHHTCS
T ss_pred             cCCCCCC-CCCCHHHHHHHHHHHhcC--CccccCcccCCHHHHHHHHHHHHHHhCCC
Confidence            5689988 44 688999999998775  22348888998777777777777766653

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=96.79  E-value=0.0015  Score=45.63  Aligned_cols=63  Identities=13%  Similarity=0.160  Sum_probs=43.6

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCC---------cccCCCCCCCCCHHHHHHHHHHHhhhhC--CCCCCC
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGEN---------KLLNQYTRGFGHPRIVQAIAKLYSSLIE--RPLLPH   97 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~---------~~~~~Y~~~~G~~~LR~aia~~~~~~~g--~~~~~~   97 (100)
                      ++|+|+.+.-.+  +.+.+.+++.+......         ....+|++..|.++||++||+++.+.+|  +.++++
T Consensus        39 ~~i~lg~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~  112 (435)
T 3piu_A           39 GIIQMGLAENQL--CFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPN  112 (435)
T ss_dssp             SBEECSSCCCCS--SHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGG
T ss_pred             CeEEeccccccc--cHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHH
Confidence            589999965444  56777777776543220         0125799999999999999999985444  445554

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=96.74  E-value=0.00068  Score=49.41  Aligned_cols=49  Identities=12%  Similarity=0.037  Sum_probs=37.3

Q ss_pred             ceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhh
Q psy782           34 PLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSL   89 (100)
Q Consensus        34 ~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~   89 (100)
                      +|+|++|.|++ +++ .+.+++.+.+.     ..+|+++.|.++||++|++++.+.
T Consensus       106 ~i~l~~g~~~~-~~~-~~~~al~~~~~-----~~~Y~~~~g~~~lr~~ia~~~~~~  154 (546)
T 2zy4_A          106 SLSYVRDQLGL-DPA-AFLHEMVDGIL-----GCNYPVPPRMLNISEKIVRQYIIR  154 (546)
T ss_dssp             HHHHHHHTSCC-CHH-HHHHHHHHHHH-----TCSCCSSSSCCHHHHHHHHHHHHH
T ss_pred             hhecccCCCCC-CCh-HHHHHHHHhhh-----cCCCCCCcCCHHHHHHHHHHHHHH
Confidence            79999999987 554 45556665552     358999999999999998877443

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=96.65  E-value=0.0018  Score=44.28  Aligned_cols=47  Identities=17%  Similarity=0.147  Sum_probs=37.2

Q ss_pred             CCCCCCCCCc-h---HHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhh
Q psy782           38 GQGFPDYESA-P---SHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSS   88 (100)
Q Consensus        38 ~~G~P~~~~p-p---~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~   88 (100)
                      +.++|++ ++ |   +++.+++.+++..+   ...|.+..|..+||++||+++..
T Consensus         3 ~~~~p~f-~~~p~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~l~~~la~~~~~   53 (388)
T 1b9h_A            3 ARKAPEF-PAWPQYDDAERNGLVRALEQG---QWWRMGGDEVNSFEREFAAHHGA   53 (388)
T ss_dssp             --CCCCC-CCSSCCCHHHHHHHHHHHHTS---CCBTTTCSHHHHHHHHHHHHTTC
T ss_pred             CccCCCC-CCCCCCCHHHHHHHHHHHHcC---CeeecCCHHHHHHHHHHHHHhCC
Confidence            4678888 65 6   88999999998875   35687888999999999999853

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=96.39  E-value=0.0062  Score=40.82  Aligned_cols=54  Identities=19%  Similarity=0.276  Sum_probs=40.1

Q ss_pred             cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCC
Q psy782           30 LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIER   92 (100)
Q Consensus        30 ~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~   92 (100)
                      .++++|.|+.+.+..  +++.+.+++.+.+.       +|....|..++++++++++.+.+|.
T Consensus        11 ~~p~~i~l~~~~~~~--~~~~v~~a~~~~~~-------~~~~~~g~~~~~~~~~~~l~~~~g~   64 (359)
T 1svv_A           11 AKPKPYSFVNDYSVG--MHPKILDLMARDNM-------TQHAGYGQDSHCAKAARLIGELLER   64 (359)
T ss_dssp             ----CEECSCSCSSC--CCHHHHHHHHHHTT-------CCCCSTTCSHHHHHHHHHHHHHHTC
T ss_pred             CCCeeEEecCCCcCC--CCHHHHHHHHHHHh-------hccccccccHHHHHHHHHHHHHhCC
Confidence            345689999866554  56778888877653       3777789999999999999998884

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=96.02  E-value=0.0013  Score=46.16  Aligned_cols=53  Identities=11%  Similarity=0.175  Sum_probs=40.2

Q ss_pred             CCCceecCCCCC------CCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhh
Q psy782           31 DHKPLNLGQGFP------DYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSS   88 (100)
Q Consensus        31 ~~~~i~l~~G~P------~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~   88 (100)
                      ..++++|+.|.+      ++ .+ +.+.+++.+++..+   ...|++..|..+||++||+++..
T Consensus        31 g~~~~~~~~~~~ylD~~~~~-~~-~~v~~a~~~~l~~~---~~~y~~~~~~~~l~~~la~~~~~   89 (467)
T 2oqx_A           31 GMNPFLLDSEDVFIDLLTDS-GT-GAVTQSMQAAMMRG---DEAYSGSRSYYALAESVKNIFGY   89 (467)
T ss_dssp             TSCGGGSCGGGCSEECSCCS-SC-SCCCHHHHHHTTSC---CCCSSSCHHHHHHHHHHHHHHCC
T ss_pred             CCCceeccCCCeeEecccCC-Cc-HHHHHHHHHHhccC---cceeccCchhHHHHHHHHHHhCc
Confidence            456788888876      33 33 67777887777654   46799888999999999999853

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=95.82  E-value=0.0018  Score=45.50  Aligned_cols=76  Identities=14%  Similarity=0.019  Sum_probs=49.2

Q ss_pred             CChhhcccchhHH----HHHHHhh-cCCCceecCCCCC--CCC--CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHH
Q psy782           10 LPPRFEASVYSVW----VEFIQLS-LDHKPLNLGQGFP--DYE--SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQ   80 (100)
Q Consensus        10 ~s~r~~~~~~~~~----~~~~~~~-~~~~~i~l~~G~P--~~~--~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~   80 (100)
                      ...|+..+.++.+    ....++. ...++++|+.|.+  |+.  .+.+.+.+++.+.+...   ..+|++..|..+||+
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ylD~~~~~~~~~v~~a~~~~~~~~---~~~y~~~~~~~~l~~   83 (467)
T 1ax4_A            7 EPFRIKMVEKIRVPSREEREAALKEAGYNPFLLPSSAVYIDLLTDSGTNAMSDHQWAAMITG---DEAYAGSRNYYDLKD   83 (467)
T ss_dssp             CSEEEEEEEECCCCCHHHHHHHHHHTTSCGGGSCGGGCSEECSCSSSCCCEEHHHHHHHHTC---CCCSSSCHHHHHHHH
T ss_pred             ChhhhceeecccccchhHHHHHHHhcCcCcccCCCCceeeecccCcCCHHHHHHHHHHHhhc---ccccccCccHHHHHH
Confidence            4566666665533    2333332 3457888888877  221  12266777777776655   457988889999999


Q ss_pred             HHHHHHhh
Q psy782           81 AIAKLYSS   88 (100)
Q Consensus        81 aia~~~~~   88 (100)
                      +||+++..
T Consensus        84 ~la~~~~~   91 (467)
T 1ax4_A           84 KAKELFNY   91 (467)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHcCC
Confidence            99998843

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=95.70  E-value=0.0034  Score=43.75  Aligned_cols=53  Identities=23%  Similarity=0.192  Sum_probs=36.8

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHh--cCCcccCCCCCCCCCH---HHHHHHHHHHh
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAAT--GENKLLNQYTRGFGHP---RIVQAIAKLYS   87 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~--~~~~~~~~Y~~~~G~~---~LR~aia~~~~   87 (100)
                      +...+++|.|++ .++..+.+++.+.++  ......++|+. .|.+   +||++||+++.
T Consensus        19 ~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~g   76 (404)
T 1e5e_A           19 KDQFGAAIPPIY-QTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLEK   76 (404)
T ss_dssp             CCTTCCSSCCCC-CCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCcCCCCc-CCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHhC
Confidence            346799999999 666555555555443  11113567987 7888   89999999874

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=95.65  E-value=0.01  Score=40.41  Aligned_cols=54  Identities=11%  Similarity=0.027  Sum_probs=39.0

Q ss_pred             CCceecCCCCC-CCCCchHHHHHHHHHHHhcCCc----ccCCCCCCCCCHHHHHHHHHHH
Q psy782           32 HKPLNLGQGFP-DYESAPSHVSKGLADAATGENK----LLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        32 ~~~i~l~~G~P-~~~~pp~~l~~a~~~~~~~~~~----~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ..+|+|+.|.+ ++ .+++.+.+++.+.+.....    ....|+...+..+||++||+++
T Consensus        39 ~~~id~~~~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~   97 (384)
T 1bs0_A           39 RQYLNFSSNDYLGL-SHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL   97 (384)
T ss_dssp             EEEEECSCCCTTSG-GGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH
T ss_pred             ceEEEeeccCccCC-CCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh
Confidence            35799999985 55 5778899999988865210    1122355678899999999987

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=95.29  E-value=0.0047  Score=43.22  Aligned_cols=74  Identities=11%  Similarity=0.041  Sum_probs=43.8

Q ss_pred             ChhhcccchhHH----HHHHHh-hcCCCceecCCCCC--CCCCchH---HHHHHHHHHHhcCCcccCCCCCCCCCHHHHH
Q psy782           11 PPRFEASVYSVW----VEFIQL-SLDHKPLNLGQGFP--DYESAPS---HVSKGLADAATGENKLLNQYTRGFGHPRIVQ   80 (100)
Q Consensus        11 s~r~~~~~~~~~----~~~~~~-~~~~~~i~l~~G~P--~~~~pp~---~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~   80 (100)
                      ..|++.+.++.+    .....+ ....++++|+.|.|  |+ ..+.   .+.+++.+++...   ...|++..|..+||+
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~ylD~-~~~~~~~~~~~~~~~a~~~~---~~~y~~~~~~~~l~~   82 (456)
T 2ez2_A            7 PFRIKSVETVSMIPRDERLKKMQEAGYNTFLLNSKDIYIDL-LTDSGTNAMSDKQWAGMMMG---DEAYAGSENFYHLER   82 (456)
T ss_dssp             SSCCCCCCCCCCCCHHHHHHHHHHTTTCGGGSCGGGCSEEC-SCSSSCCCCCHHHHHHHTTC---CCCSSSCHHHHHHHH
T ss_pred             CeeeeeecccCCCCHHHHHHHHHHCCCCcccCCcccceeee-ccccCCccCCHHHHHHhhcc---hhhcccChhHHHHHH
Confidence            445555554422    222222 24457899999988  65 2211   2223333334443   457988889999999


Q ss_pred             HHHHHHhh
Q psy782           81 AIAKLYSS   88 (100)
Q Consensus        81 aia~~~~~   88 (100)
                      +||+++..
T Consensus        83 ~la~~~~~   90 (456)
T 2ez2_A           83 TVQELFGF   90 (456)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhCC
Confidence            99999853

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=95.24  E-value=0.003  Score=43.32  Aligned_cols=54  Identities=15%  Similarity=0.104  Sum_probs=39.2

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCC---c-ccCCCCC--CCCCHHHHHHHHHHHhh
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGEN---K-LLNQYTR--GFGHPRIVQAIAKLYSS   88 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~---~-~~~~Y~~--~~G~~~LR~aia~~~~~   88 (100)
                      ++|+|+.|.|+.  +|+.+.+++.+.+....   . ..+.|++  ..|..+||++||+++..
T Consensus        28 ~~i~l~~~~~~~--~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~   87 (420)
T 1t3i_A           28 PLVYLDNAATSQ--KPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINA   87 (420)
T ss_dssp             ECEECBTTTCCC--CCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ceEEecCCccCC--CCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCC
Confidence            389999999975  45778888888876521   0 1345654  57889999999998743

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=95.23  E-value=0.0036  Score=43.25  Aligned_cols=54  Identities=7%  Similarity=-0.020  Sum_probs=40.2

Q ss_pred             CceecCCCCC--CCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           33 KPLNLGQGFP--DYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        33 ~~i~l~~G~P--~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      .+++|+.|.+  ++..+++.+.+++.+.+........+|.+..|..+||++||+++
T Consensus        42 ~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~   97 (426)
T 1sff_A           42 EYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKV   97 (426)
T ss_dssp             EEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHS
T ss_pred             EEEEcccChhhcccCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhC
Confidence            4789988874  33246688899999888764222235778889999999999988

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=95.22  E-value=0.014  Score=41.65  Aligned_cols=81  Identities=14%  Similarity=-0.050  Sum_probs=54.5

Q ss_pred             CChhhcccchhHHHHHHHhh-cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCc----ccCCCCCCCCCHHHHHHHHH
Q psy782           10 LPPRFEASVYSVWVEFIQLS-LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENK----LLNQYTRGFGHPRIVQAIAK   84 (100)
Q Consensus        10 ~s~r~~~~~~~~~~~~~~~~-~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~----~~~~Y~~~~G~~~LR~aia~   84 (100)
                      ++.++..+.+.++..+.+.. .+.+.|+|..|+.   ++++.+.+++.+++.....    ....|+...+..++++++.+
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~a~e~---~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~   97 (483)
T 1rv3_A           21 LAQPLKDSDAEVYDIIKKESNRQRVGLELIASEN---FASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQK   97 (483)
T ss_dssp             TTSCHHHHCHHHHHHHHHHHHHHHSSEECCTTCC---CCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHH
T ss_pred             HhhhhhhcCHHHHHHHHHHHHHhhcCeEEEcCCC---CCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHH
Confidence            34566666777777666532 3357899988764   4577888988887765310    00124444556789999999


Q ss_pred             HHhhhhCCC
Q psy782           85 LYSSLIERP   93 (100)
Q Consensus        85 ~~~~~~g~~   93 (100)
                      ++++.+|++
T Consensus        98 ~~a~~~g~~  106 (483)
T 1rv3_A           98 RALQAYGLD  106 (483)
T ss_dssp             HHHHHTTCC
T ss_pred             HHHHHhCCC
Confidence            999988876

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=95.07  E-value=0.011  Score=40.11  Aligned_cols=42  Identities=12%  Similarity=0.101  Sum_probs=32.8

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ++|+|+.|++++ .+|+.+      ++ ..   .++|++. |..+||++||+++
T Consensus        30 ~~i~l~~~~~~~-~~~~~v------a~-~~---~~~Y~~~-~~~~lr~~la~~~   71 (356)
T 1fg7_A           30 GDVWLNANEYPT-AVEFQL------TQ-QT---LNRYPEC-QPKAVIENYAQYA   71 (356)
T ss_dssp             CSEECSSCCCSS-CCCCCC------CC-CC---TTSCCCS-SCHHHHHHHHHHH
T ss_pred             ceEEeeCCCCCC-CCCHhH------hh-hh---hccCCCc-cHHHHHHHHHHHh
Confidence            689999999988 666555      12 22   6789775 6999999999998

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=95.01  E-value=0.048  Score=37.92  Aligned_cols=53  Identities=15%  Similarity=-0.001  Sum_probs=35.3

Q ss_pred             CceecCCCCC-CCCCchHHHHHHHHHHHhcCCcccCCCCCCCCC----HHHHHHHHHHH
Q psy782           33 KPLNLGQGFP-DYESAPSHVSKGLADAATGENKLLNQYTRGFGH----PRIVQAIAKLY   86 (100)
Q Consensus        33 ~~i~l~~G~P-~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~----~~LR~aia~~~   86 (100)
                      ++|+|+.|+| ++ .+++.+.+++.+.+...+.....|....|.    .+|+++||+++
T Consensus        65 ~~id~~~~~~lg~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~  122 (427)
T 2w8t_A           65 DTILLGTYNYMGM-TFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFY  122 (427)
T ss_dssp             EEEECSCCCTTCG-GGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHH
T ss_pred             eEEEEECcccccC-CCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHh
Confidence            3689999986 54 567889999988887621113345555665    66666666665

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=94.92  E-value=0.012  Score=40.31  Aligned_cols=50  Identities=8%  Similarity=-0.024  Sum_probs=33.7

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCC-CCCCCHHHHHHHHHHHhhh
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYT-RGFGHPRIVQAIAKLYSSL   89 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~-~~~G~~~LR~aia~~~~~~   89 (100)
                      .++++|+.|.|++ .  +.+.+++.+++...     .|+ +..|..+||++||+++...
T Consensus        22 ~~~~~l~~~~p~~-~--~~~~~a~~~~~~~~-----~~~~~~~~~~~l~~~la~~~~~~   72 (391)
T 3dr4_A           22 SDLPRISVAAPRL-D--GNERDYVLECMDTT-----WISSVGRFIVEFEKAFADYCGVK   72 (391)
T ss_dssp             ------CCCCCCC-C--SSHHHHHHHHHHHT-----CCSSCSHHHHHHHHHHHHHHTCS
T ss_pred             CCCceeccCCCCC-C--HHHHHHHHHHHHcC-----CccCCChHHHHHHHHHHHHhCCC
Confidence            4789999999977 3  56677777777654     355 6789999999999998543

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=94.91  E-value=0.03  Score=38.85  Aligned_cols=58  Identities=12%  Similarity=-0.102  Sum_probs=41.1

Q ss_pred             CCceecCCCCCCCC--Cc-hHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCC
Q psy782           32 HKPLNLGQGFPDYE--SA-PSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERP   93 (100)
Q Consensus        32 ~~~i~l~~G~P~~~--~p-p~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~   93 (100)
                      ..+++|+.|.+...  .+ ++.+.+++.+.++..    ..|++..|..+++.++++.+.+.+|++
T Consensus        42 ~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~----~~~~~~~~~~~~~~~l~~~la~~~~~~  102 (419)
T 2eo5_A           42 NKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKL----AHAAANDFYNIPQLELAKKLVTYSPGN  102 (419)
T ss_dssp             CEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTS----CCCSCSCSCCHHHHHHHHHHHHHSSCS
T ss_pred             CEEEEccCChhhhccCCCCCHHHHHHHHHHHhhC----ccccccccCCHHHHHHHHHHHHhCCCC
Confidence            34789999986431  23 688999999988654    235555566677888888888877765

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=94.84  E-value=0.0061  Score=41.36  Aligned_cols=54  Identities=13%  Similarity=0.175  Sum_probs=39.2

Q ss_pred             CCceecCCCCCCCC-C-chHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           32 HKPLNLGQGFPDYE-S-APSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        32 ~~~i~l~~G~P~~~-~-pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ..+++|+.|.|+.. . +++.+.+++.+.+++.......| +..|..+||++||+++
T Consensus        28 ~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~y-~~~~~~~l~~~la~~~   83 (375)
T 2eh6_A           28 KEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLY-ENPWQEELAHKLVKHF   83 (375)
T ss_dssp             CEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCTTB-CCHHHHHHHHHHHHTS
T ss_pred             CEEEEcCCcccccccCCCCHHHHHHHHHHHHhccccCccc-CCHHHHHHHHHHHhhc
Confidence            35799999987432 3 67899999998886542223467 4567889999999875

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=94.62  E-value=0.0076  Score=40.70  Aligned_cols=56  Identities=7%  Similarity=-0.004  Sum_probs=34.7

Q ss_pred             CCCceecCCCCCCCCCchHHHHHHHHHHHhcCC------cccCCCCCCCCCHHHHHH-HHHHHh
Q psy782           31 DHKPLNLGQGFPDYESAPSHVSKGLADAATGEN------KLLNQYTRGFGHPRIVQA-IAKLYS   87 (100)
Q Consensus        31 ~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~------~~~~~Y~~~~G~~~LR~a-ia~~~~   87 (100)
                      ++++|.|..|.+.. .+++.+.+++.+.+....      .....|.+..+..+||++ ||+++.
T Consensus         6 ~~~~i~ld~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~   68 (371)
T 2e7j_A            6 TKDFINIDPLQTGG-KLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLG   68 (371)
T ss_dssp             --CCEECCHHHHTC-CCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTT
T ss_pred             CCCcEEecccccCC-CCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcC
Confidence            45789999988777 778889999888776531      012346678899999999 999874

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=94.50  E-value=0.008  Score=40.74  Aligned_cols=48  Identities=17%  Similarity=0.161  Sum_probs=38.7

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhh
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSS   88 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~   88 (100)
                      .++++|+.|.|++ .+   +.+++.+++...     .|.+..|..+||++||+++..
T Consensus         6 ~~~~~l~~~~~~~-~~---~~~~~~~~~~~~-----~~~~~~~~~~l~~~la~~~~~   53 (374)
T 3uwc_A            6 VPYSYLERQFADI-EP---YLNDLREFIKTA-----DFTLGAELEKFEKRFAALHNA   53 (374)
T ss_dssp             BCSCCHHHHTSSC-HH---HHHHHHHHHHHT-----CCSSCHHHHHHHHHHHHHTTC
T ss_pred             ceeeccccCCCCc-hH---HHHHHHHHHHcC-----CcccChhHHHHHHHHHHHhCC
Confidence            4578999999988 43   888888877654     477888999999999998754

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=94.02  E-value=0.25  Score=33.36  Aligned_cols=30  Identities=20%  Similarity=0.339  Sum_probs=24.7

Q ss_pred             HHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           54 GLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        54 a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ++.+++...   ..+|++..|.++||++||+++
T Consensus        47 ~~~~~~~~~---~~~y~~~~g~~~l~~~la~~~   76 (375)
T 3op7_A           47 DFYKKLQGT---KLNYGWIEGSPAFKKSVSQLY   76 (375)
T ss_dssp             HHHHHHHTS---CCSSCCTTCCHHHHHHHHTTS
T ss_pred             HHHHHHhcC---CcCCCCCCChHHHHHHHHHHh
Confidence            455556655   678999999999999999987

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=93.97  E-value=0.096  Score=36.82  Aligned_cols=57  Identities=9%  Similarity=-0.084  Sum_probs=42.2

Q ss_pred             CceecCCCCC--CCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCC
Q psy782           33 KPLNLGQGFP--DYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIER   92 (100)
Q Consensus        33 ~~i~l~~G~P--~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~   92 (100)
                      ..++|..|.+  .+...++.+.+++.+.+.+.   .++|+...|..+++.++++++.+.++.
T Consensus        51 ~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~---~~~~~~~~~~~~~~~~la~~l~~~~~~  109 (459)
T 4a6r_A           51 KIIDGMAGLWCVNVGYGRKDFAEAARRQMEEL---PFYNTFFKTTHPAVVELSSLLAEVTPA  109 (459)
T ss_dssp             EEEETTHHHHTCTTCBCCHHHHHHHHHHHHHC---SCCCTTSSSCCHHHHHHHHHHHHHSCT
T ss_pred             EEEECCCchhcccCCCCCHHHHHHHHHHHHhc---cccccccccCCHHHHHHHHHHHHhCCC
Confidence            3688888843  23234678999999888765   456776678888999999999887654

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=93.95  E-value=0.014  Score=39.18  Aligned_cols=50  Identities=14%  Similarity=0.153  Sum_probs=36.0

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHh
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   87 (100)
                      +.+|+|+.+...+  |++.+.+++.++.. .   ...|++..|..+||++||+++.
T Consensus         3 ~~~i~~~~~~~~~--p~~~~~~a~~~~~~-~---~~~y~~~~~~~~l~~~la~~~g   52 (347)
T 1jg8_A            3 HMMIDLRSDTVTK--PTEEMRKAMAQAEV-G---DDVYGEDPTINELERLAAETFG   52 (347)
T ss_dssp             --CEECSCGGGCC--CCHHHHHHHHTCCC-C---CGGGTCCHHHHHHHHHHHHHHT
T ss_pred             ceEEEeccccCCC--CCHHHHHHHhcCCC-C---CcccCCChHHHHHHHHHHHHhC
Confidence            3578999988766  45677787765432 2   2368888899999999999874

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=93.90  E-value=0.048  Score=37.27  Aligned_cols=53  Identities=8%  Similarity=-0.048  Sum_probs=36.4

Q ss_pred             CceecCCCCCCCCC-chHHHHHHHHHHHhcCCcc--cCCC--CCCCCCHHHHHHHHHHH
Q psy782           33 KPLNLGQGFPDYES-APSHVSKGLADAATGENKL--LNQY--TRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        33 ~~i~l~~G~P~~~~-pp~~l~~a~~~~~~~~~~~--~~~Y--~~~~G~~~LR~aia~~~   86 (100)
                      .+|+|+.|.|-. + +++.+.+++.+.+...+..  ...|  +...+..+||++||+++
T Consensus        46 ~~id~~~~~~~g-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  103 (401)
T 1fc4_A           46 HVINFCANNYLG-LANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL  103 (401)
T ss_dssp             EEEECCCSCTTS-CTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH
T ss_pred             cEEEeeccCccc-ccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHh
Confidence            579999997732 3 5788999998888652110  0123  22567889999999987

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=93.82  E-value=0.13  Score=35.72  Aligned_cols=56  Identities=9%  Similarity=0.003  Sum_probs=43.4

Q ss_pred             CceecCCCCCCCC--CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCC
Q psy782           33 KPLNLGQGFPDYE--SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIER   92 (100)
Q Consensus        33 ~~i~l~~G~P~~~--~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~   92 (100)
                      .+++|+.|.+...  ..++.+.+++.+.+...    .+|+...|..++++++++++.+.++.
T Consensus        44 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~----~~~~~~~~~~~~~~~l~~~la~~~~~  101 (439)
T 3dxv_A           44 ELIDLSGAWGAASLGYGHPAIVAAVSAAAANP----AGATILSASNAPAVTLAERLLASFPG  101 (439)
T ss_dssp             EEEESSTTTTTCTTCBSCHHHHHHHHHHHHSC----SCSCSSSSEEHHHHHHHHHHHHTTTC
T ss_pred             EEEECCCchhhccCCCCCHHHHHHHHHHHHhc----cCccccccCCHHHHHHHHHHHHhCCC
Confidence            4799999988432  26688999999888654    45776788889999999999887643

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=93.77  E-value=0.026  Score=38.99  Aligned_cols=45  Identities=16%  Similarity=0.152  Sum_probs=34.8

Q ss_pred             cCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCC-CCCCHHHHHHH-HHHHh
Q psy782           37 LGQGFPDYESAPSHVSKGLADAATGENKLLNQYTR-GFGHPRIVQAI-AKLYS   87 (100)
Q Consensus        37 l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~-~~G~~~LR~ai-a~~~~   87 (100)
                      +.+|.|++ .+++++.+++.++++.+   .  |++ .....+||++| |+++.
T Consensus         5 i~~~~p~~-~~~~~i~~a~~~~~~~~---~--~~~~~~~~~~l~~~~~a~~~g   51 (377)
T 3ju7_A            5 IPFLRAST-VPVIEYLDELKEIDASH---I--YTNYGPINQRFEQTIMSGFFQ   51 (377)
T ss_dssp             BCSCCCCC-CCGGGGHHHHHHHHHHT---C--CSSSCHHHHHHHHHHHHHTST
T ss_pred             eeccCCCC-CCcHHHHHHHHHHHHcC---C--cccCCHHHHHHHHHHHHHHhC
Confidence            45669999 88999999999999876   3  322 23468999999 98875

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=93.63  E-value=0.058  Score=37.08  Aligned_cols=52  Identities=17%  Similarity=0.129  Sum_probs=31.6

Q ss_pred             ceecCCCCC-CCCCchHHHHHHHHHHHhcCCcccCCCCCC----CCCHHHHHHHHHHH
Q psy782           34 PLNLGQGFP-DYESAPSHVSKGLADAATGENKLLNQYTRG----FGHPRIVQAIAKLY   86 (100)
Q Consensus        34 ~i~l~~G~P-~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~----~G~~~LR~aia~~~   86 (100)
                      +++|+..++ ++ .+++.+.+++.+.+++.+.....|...    ....+|++++++++
T Consensus        61 ~ld~~s~~~l~~-~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  117 (409)
T 3kki_A           61 DIILQSNDYLAL-ANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFT  117 (409)
T ss_dssp             SEECCCSCTTCC-TTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHH
T ss_pred             eEEeeccCccCC-cCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHh
Confidence            567766543 24 566899999999887632223333333    34566666666665

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=93.44  E-value=0.07  Score=37.56  Aligned_cols=56  Identities=11%  Similarity=0.007  Sum_probs=41.2

Q ss_pred             CceecCCCCC--CCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhC
Q psy782           33 KPLNLGQGFP--DYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIE   91 (100)
Q Consensus        33 ~~i~l~~G~P--~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g   91 (100)
                      .+|+|+.|..  .+...++.+.+++.+.+.+.   .+.|+...|..+++.++++++.+.++
T Consensus        52 ~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~---~~~~~~~~~~~~~~~~la~~l~~~~~  109 (460)
T 3gju_A           52 KSIDAFAGLYCVNVGYGRQKIADAIATQAKNL---AYYHAYVGHGTEASITLAKMIIDRAP  109 (460)
T ss_dssp             EEEETTHHHHTCTTCBCCHHHHHHHHHHHHHH---SCCCCCTTCCCHHHHHHHHHHHHHSC
T ss_pred             EEEECCcchhhccCCCCCHHHHHHHHHHHHhc---cccccccccCCHHHHHHHHHHHhhCC
Confidence            4789988832  22145688899998888765   45677777888899999999988644

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=93.41  E-value=0.052  Score=36.24  Aligned_cols=52  Identities=13%  Similarity=0.283  Sum_probs=31.5

Q ss_pred             CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhC
Q psy782           31 DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIE   91 (100)
Q Consensus        31 ~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g   91 (100)
                      .+++|+|+.+.+..  +++.+.+++.+.+...   ...|++    .++++++++++.+.+|
T Consensus         6 ~~~~id~~~~~~~~--~~~~v~~a~~~~~~~~---~~~~~~----~~~~~~l~~~la~~~g   57 (356)
T 1v72_A            6 RPPALGFSSDNIAG--ASPEVAQALVKHSSGQ---AGPYGT----DELTAQVKRKFCEIFE   57 (356)
T ss_dssp             CCCCCBCSCGGGCC--CCHHHHHHHHHTTSSC---CCSTTC----SHHHHHHHHHHHHHHT
T ss_pred             CCceEeeccCCccC--CCHHHHHHHHhhccCc---cccccc----chHHHHHHHHHHHHhC
Confidence            35789999986644  5678888887764221   244543    3455555555555555

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=93.28  E-value=0.0056  Score=43.71  Aligned_cols=57  Identities=18%  Similarity=0.121  Sum_probs=39.2

Q ss_pred             CceecCCC-CCCCCCchHHHHHHHHHHHhc-CCcccCCCCCCCCCHHHHHHHHHHHhhhhCC
Q psy782           33 KPLNLGQG-FPDYESAPSHVSKGLADAATG-ENKLLNQYTRGFGHPRIVQAIAKLYSSLIER   92 (100)
Q Consensus        33 ~~i~l~~G-~P~~~~pp~~l~~a~~~~~~~-~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~   92 (100)
                      ++|+|+.| +|++ .+|+.+.+++...... .....++|+ ..|.+ +++++++++++.+|.
T Consensus        90 ~~i~l~~g~~~~~-~~~~~i~~a~~~~~~~~~~~~~~~Y~-~~g~~-~~~~l~~~la~~~g~  148 (464)
T 1ibj_A           90 LLVNLDNKFDPFD-AMSTPLYQTATFKQPSAIENGPYDYT-RSGNP-TRDALESLLAKLDKA  148 (464)
T ss_dssp             HHTCCCCSSCTTC-CSSCCCCCCSBCCCSSSSCCCSCSBT-TTCCH-HHHHHHHHHHHHHTC
T ss_pred             eEEECCCCCCCCC-CCCccHHhhhhhhhhcccccCCcccc-CCCCH-HHHHHHHHHHHHhCC
Confidence            47999998 8888 6666666665432111 011256787 56888 899999999988775

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=93.24  E-value=0.24  Score=34.65  Aligned_cols=70  Identities=10%  Similarity=-0.042  Sum_probs=48.4

Q ss_pred             hHHHHHHHhhcCC--CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCC
Q psy782           20 SVWVEFIQLSLDH--KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPL   94 (100)
Q Consensus        20 ~~~~~~~~~~~~~--~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~   94 (100)
                      .++..+.+.....  ..++++.+.+.+  +++.+.+++.+++...   ..+|....|..+|++++.+++.+.+|++.
T Consensus        27 ~v~~~~~~~~~~~~~~~~~~~~f~~~~--~~~~v~e~~~~a~~~~---~~~~~~~~~~~~l~~~~~~~la~l~g~~~   98 (452)
T 2dgk_A           27 VAFQIINDELYLDGNARQNLATFCQTW--DDENVHKLMDLSINKN---WIDKEEYPQSAAIDLRCVNMVADLWHAPA   98 (452)
T ss_dssp             HHHHHHHHHGGGSCCCTTBCSCCSCCC--CCHHHHHHHHHTTTCB---TTCTTTCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHhcCCCCCccCCCCeeCCC--chHHHHHHHHHHhccC---CCChhhChhHHHHHHHHHHHHHHHhCCCc
Confidence            4455665555322  235566666533  4467888888887654   56677777889999999999999888764

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=93.23  E-value=0.23  Score=33.63  Aligned_cols=54  Identities=9%  Similarity=-0.057  Sum_probs=34.8

Q ss_pred             CceecCCCCC-CCCCchHHHHHHHHHHHhcCCcc----cCCCCCCCCCHHHHHHHHHHHh
Q psy782           33 KPLNLGQGFP-DYESAPSHVSKGLADAATGENKL----LNQYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus        33 ~~i~l~~G~P-~~~~pp~~l~~a~~~~~~~~~~~----~~~Y~~~~G~~~LR~aia~~~~   87 (100)
                      ++|+|+.|.| .+ .+++.+.+++.+.+......    ...|+...+..+||++||+++.
T Consensus        44 ~~id~~~~~~~g~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~  102 (399)
T 3tqx_A           44 EVLNFCANNYLGL-ADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLG  102 (399)
T ss_dssp             EEEECSSCCTTSC-TTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHT
T ss_pred             eEEEeeccCcccc-cCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHC
Confidence            4799999976 33 45688888888887653110    1113334446888888888763

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=93.00  E-value=0.31  Score=34.47  Aligned_cols=77  Identities=6%  Similarity=-0.172  Sum_probs=46.1

Q ss_pred             HHHHHHHhhcC-CCceecCCCCCCCC-CchHHHHHHHHHHHhcCC-cccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCC
Q psy782           21 VWVEFIQLSLD-HKPLNLGQGFPDYE-SAPSHVSKGLADAATGEN-KLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        21 ~~~~~~~~~~~-~~~i~l~~G~P~~~-~pp~~l~~a~~~~~~~~~-~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~   97 (100)
                      +...+.++... .+...++...+..- .+++.+.+++.+++.... ....+|....|..+|++++++++.+.+|.+.+++
T Consensus        48 i~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~  127 (497)
T 3mc6_A           48 VIEELNKLNDLIPHTQWKEGKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTG  127 (497)
T ss_dssp             HHHHHHHHHHSSCCCCGGGTCBSSSCSCCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTC
T ss_pred             HHHHHHHHhhhcCCCCCCCCCEeeecCCCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCC
Confidence            34444444443 23333333333321 334667777777766521 1245677778889999999999999888875444

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=92.78  E-value=0.074  Score=37.32  Aligned_cols=78  Identities=9%  Similarity=0.049  Sum_probs=48.7

Q ss_pred             ChhhcccchhHHHHHHHhh-cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCC---CCCHHHH--HHHH-
Q psy782           11 PPRFEASVYSVWVEFIQLS-LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRG---FGHPRIV--QAIA-   83 (100)
Q Consensus        11 s~r~~~~~~~~~~~~~~~~-~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~---~G~~~LR--~aia-   83 (100)
                      ..++..+.+.++..+.+.. ...++|+|. +.+++ . ++.+.+++.+.+.+.  ...+|+..   .|.+.++  ++++ 
T Consensus        23 ~~~l~~~~~~i~~~~~~~~~~~~~~i~l~-~~~~~-~-~~~v~~a~~~~~~~~--~~~g~~~~~~~~g~~~~~~~e~~a~   97 (447)
T 3h7f_A           23 SAPLAEVDPDIAELLAKELGRQRDTLEMI-ASENF-V-PRAVLQAQGSVLTNK--YAEGLPGRRYYGGCEHVDVVENLAR   97 (447)
T ss_dssp             GCCHHHHCHHHHHHHHHHHHHHHHSEECC-TTCCC-C-CHHHHHHHTSGGGGC--CCCEETTEESSSCCHHHHHHHHHHH
T ss_pred             HHHHHhCCHHHHHHHHHHHHHHhCceeEe-cCCCC-C-CHHHHHHHHHHhcCC--ccccCCcccccCccHHHHHHHHHHH
Confidence            4556667777777665432 234678984 45566 4 778888887776533  12344332   3777776  7777 


Q ss_pred             HHHhhhhCCC
Q psy782           84 KLYSSLIERP   93 (100)
Q Consensus        84 ~~~~~~~g~~   93 (100)
                      +++.+.+|++
T Consensus        98 ~~la~~~g~~  107 (447)
T 3h7f_A           98 DRAKALFGAE  107 (447)
T ss_dssp             HHHHHHHTCS
T ss_pred             HHHHHHcCCC
Confidence            7887777764

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=92.69  E-value=0.012  Score=40.54  Aligned_cols=49  Identities=12%  Similarity=0.159  Sum_probs=39.1

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhh
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSS   88 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~   88 (100)
                      .++|+|+.|.|++ .  +.+.+++.+.+...     .|.+..|..+||++||+++..
T Consensus        30 ~~~id~~~~~~~~-~--~~v~~a~~~~~~~~-----~y~~~~~~~~l~~~la~~~~~   78 (399)
T 2oga_A           30 VPFLDLKAAYEEL-R--AETDAAIARVLDSG-----RYLLGPELEGFEAEFAAYCET   78 (399)
T ss_dssp             BCSCCHHHHHHHT-H--HHHHHHHHHHHHHT-----CCSSSHHHHHHHHHHHHHTTS
T ss_pred             CcccccCcCCCCC-C--HHHHHHHHHHHhcC-----CCCCchhHHHHHHHHHHHHCC
Confidence            4689999999877 3  77888888887643     577778899999999998743

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=92.08  E-value=0.14  Score=34.70  Aligned_cols=46  Identities=13%  Similarity=0.172  Sum_probs=33.8

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhh
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSS   88 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~   88 (100)
                      ++|+|+.  |++  | +.+.+++.+.+...   .  |.+..|..+||++||+++..
T Consensus         9 ~~i~~~~--p~~--~-~~~~~a~~~~~~~~---~--~~~~~~~~~l~~~la~~~~~   54 (393)
T 1mdo_A            9 DFLPFSR--PAM--G-AEELAAVKTVLDSG---W--ITTGPKNQELEAAFCRLTGN   54 (393)
T ss_dssp             CCBCSCC--CCC--C-HHHHHHHHHHHHHT---C--CSSSHHHHHHHHHHHHHHCC
T ss_pred             cccccCC--CCC--C-HHHHHHHHHHHhcC---C--cCCChHHHHHHHHHHHHhCC
Confidence            5788886  666  3 45578888888664   2  44567899999999999853

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=91.70  E-value=0.087  Score=35.72  Aligned_cols=53  Identities=9%  Similarity=-0.018  Sum_probs=37.6

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccC------CCCCCCCCHHHHHHHHHHHh
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLN------QYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~------~Y~~~~G~~~LR~aia~~~~   87 (100)
                      +++.|..|.++. . |+.+.+++.+.+.......+      +|.+..|..+||++||+++.
T Consensus        23 ~~i~l~~~~~~~-~-~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~   81 (406)
T 1kmj_A           23 PLAYLDSAASAQ-K-PSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFIN   81 (406)
T ss_dssp             ECEECCTTTCCC-C-CHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceEEecCCccCC-C-CHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcC
Confidence            589999999976 4 45788888888865310111      13456788999999999874

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=91.42  E-value=0.28  Score=33.92  Aligned_cols=58  Identities=12%  Similarity=0.067  Sum_probs=41.5

Q ss_pred             CCceecCCCCCC--CCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCC
Q psy782           32 HKPLNLGQGFPD--YESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERP   93 (100)
Q Consensus        32 ~~~i~l~~G~P~--~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~   93 (100)
                      ...++|+.|.+.  +...++.+.+++.+.+...    ..|+...|..++++++++++.+.++..
T Consensus        29 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~----~~~~~~~~~~~~~~~l~~~la~~~~~~   88 (430)
T 3i4j_A           29 RRYLDGSSGALVANIGHGRAEVGERMAAQAARL----PFVHGSQFSSDVLEEYAGRLARFVGLP   88 (430)
T ss_dssp             CEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHC----CCCCTTTCEEHHHHHHHHHHHHHTTCT
T ss_pred             CEEEECCCchhccccCCCCHHHHHHHHHHHHhc----ccccccccCCHHHHHHHHHHHHhCCCC
Confidence            347899887432  3133678889988888653    346666788889999999998876643

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=91.32  E-value=0.28  Score=33.32  Aligned_cols=70  Identities=13%  Similarity=0.084  Sum_probs=43.0

Q ss_pred             hhHHHHHHHhh-cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCC---CCHH--HHHHHH-HHHhhhhC
Q psy782           19 YSVWVEFIQLS-LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGF---GHPR--IVQAIA-KLYSSLIE   91 (100)
Q Consensus        19 ~~~~~~~~~~~-~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~---G~~~--LR~aia-~~~~~~~g   91 (100)
                      +.++..+.+.. ...++|+|..|.+..   ++.+.+++.+.+.+.  ..++|+...   |.+.  ++++++ +++.+.+|
T Consensus         9 ~~i~~~~~~~~~~~~~~i~~~~~~~~~---~~~v~~a~~~~~~~~--~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g   83 (407)
T 2dkj_A            9 EALFELIALEEKRQREGLELIASENFV---SKQVREAVGSVLTNK--YAEGYPGARYYGGCEVIDRVESLAIERAKALFG   83 (407)
T ss_dssp             HHHHHHHHHHHHHHHTSEECCTTCCCC---CHHHHHHHTSGGGGC--CCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhhcceeeccCCCCC---CHHHHHHHHhhhhcC--cccCCCcccccCCchHHHHHHHHHHHHHHHHhC
Confidence            34455444432 235789999998755   677888888877542  145675443   7775  666555 45555556


Q ss_pred             CC
Q psy782           92 RP   93 (100)
Q Consensus        92 ~~   93 (100)
                      .+
T Consensus        84 ~~   85 (407)
T 2dkj_A           84 AA   85 (407)
T ss_dssp             CS
T ss_pred             CC
Confidence            53

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=91.20  E-value=0.36  Score=33.66  Aligned_cols=52  Identities=15%  Similarity=0.126  Sum_probs=38.4

Q ss_pred             CceecCCCCCCC--CCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhC
Q psy782           33 KPLNLGQGFPDY--ESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIE   91 (100)
Q Consensus        33 ~~i~l~~G~P~~--~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g   91 (100)
                      ..|+|+.|.+..  ..+++.+.+++.+.+...   . .|   .+..++++++|+++.+.++
T Consensus        58 ~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~---~-~~---~~~~~~~~~la~~l~~~~~  111 (453)
T 2cy8_A           58 VYLDFFGGHGALVLGHGHPRVNAAIAEALSHG---V-QY---AASHPLEVRWAERIVAAFP  111 (453)
T ss_dssp             EEEESCTTTTSCTTCBTCHHHHHHHHHHHTTT---C-SS---CSSCHHHHHHHHHHHHHCT
T ss_pred             EEEECcccHhhcccCCCCHHHHHHHHHHHHhC---C-CC---CCCCHHHHHHHHHHHhhCC
Confidence            478999997532  146788999999988664   2 23   2467899999999988653

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=91.00  E-value=0.16  Score=34.73  Aligned_cols=53  Identities=15%  Similarity=-0.068  Sum_probs=35.8

Q ss_pred             ceecCCCCC-CCCCchHHHHHHHHHHHhcCCcc----cCCCCCCCCCHHHHHHHHHHHh
Q psy782           34 PLNLGQGFP-DYESAPSHVSKGLADAATGENKL----LNQYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus        34 ~i~l~~G~P-~~~~pp~~l~~a~~~~~~~~~~~----~~~Y~~~~G~~~LR~aia~~~~   87 (100)
                      +++|..+.. .+ .+++.+.+++.+.+.+....    ...|+...+..+||++||+++.
T Consensus        48 ~i~~~~~~~~~~-~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~  105 (401)
T 2bwn_A           48 ITVWCGNDYLGM-GQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQ  105 (401)
T ss_dssp             EEECSCSCTTSG-GGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTT
T ss_pred             EEEeeCCCcccC-CCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhC
Confidence            577776654 33 34457889998888752111    2346667788999999999874

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=90.30  E-value=0.16  Score=33.99  Aligned_cols=58  Identities=10%  Similarity=0.146  Sum_probs=34.4

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcC-CcccCCCCC---CCCCHHHHHHHHHHHhhhhCCC
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGE-NKLLNQYTR---GFGHPRIVQAIAKLYSSLIERP   93 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~-~~~~~~Y~~---~~G~~~LR~aia~~~~~~~g~~   93 (100)
                      .++.|+.|.+   .+|+.+.+++.+.+.+. ......|..   ..|..++.+++.+++++.+|+.
T Consensus         3 ~~~~~~~g~~---~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~   64 (360)
T 1w23_A            3 QVFNFNAGPS---ALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIP   64 (360)
T ss_dssp             CCEECCSSSC---CCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCC
T ss_pred             ceEeecCCCc---CCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCC
Confidence            4688888865   35677888888877542 001122322   3355556666667776666764

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=90.08  E-value=0.086  Score=36.25  Aligned_cols=53  Identities=15%  Similarity=0.099  Sum_probs=26.8

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHh--cCCcccCCCC--CCCCCHHHHHHHHHHH
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAAT--GENKLLNQYT--RGFGHPRIVQAIAKLY   86 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~--~~~~~~~~Y~--~~~G~~~LR~aia~~~   86 (100)
                      +-..+++|.|++ .++..+.+++.+++.  ......+.|+  +..+..+||++|++++
T Consensus        21 ~~~~~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~   77 (398)
T 2rfv_A           21 DPSTGALSTPIF-QTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLE   77 (398)
T ss_dssp             CTTTCCSSCCCC-CCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHH
T ss_pred             ccCCCCcCCCCc-CCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHh
Confidence            345799999999 655444444444443  1111123343  2334455555555554

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=90.04  E-value=0.53  Score=33.79  Aligned_cols=47  Identities=11%  Similarity=-0.016  Sum_probs=38.4

Q ss_pred             CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCC
Q psy782           46 SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLL   95 (100)
Q Consensus        46 ~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~   95 (100)
                      .++..+.+.+..++...   ...|....|..+|++++++++.+.+|.+.+
T Consensus       107 ~~~~~~~e~l~~~~~~~---~~~~~~~p~~~~le~~~~~~l~~~~g~~~~  153 (511)
T 3vp6_A          107 DIIGLAGEWLTSTANTN---MFTYEIAPVFVLMEQITLKKMREIVGWSSK  153 (511)
T ss_dssp             CHHHHHHHHHHHHHCCC---SSCTTTCHHHHHHHHHHHHHHHHHHTCCSS
T ss_pred             cHHHHHHHHHHHHhccC---CCCcccCchHHHHHHHHHHHHHHHhCCCCC
Confidence            45567778888887665   678988899999999999999999888643

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=89.28  E-value=0.38  Score=34.44  Aligned_cols=49  Identities=8%  Similarity=0.028  Sum_probs=36.2

Q ss_pred             CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCC
Q psy782           46 SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        46 ~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~   97 (100)
                      .+++.+.+++.+++...   ...|....+..+|.+.+.+++.+.+|++.+++
T Consensus        67 ~~~~~v~~~l~~~~~~~---~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~  115 (502)
T 3hbx_A           67 WMEPECDKLIMSSINKN---YVDMDEYPVTTELQNRCVNMIAHLFNAPLEEA  115 (502)
T ss_dssp             CCCHHHHHHHHHTTTCB---TTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSS
T ss_pred             CCCHHHHHHHHHHhccC---CCChhcChhHHHHHHHHHHHHHHHhCCCcccc
Confidence            35577888888877665   44555556678899999999999889875444

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=88.69  E-value=0.67  Score=32.86  Aligned_cols=56  Identities=9%  Similarity=-0.008  Sum_probs=39.2

Q ss_pred             CceecCCCCC--CCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCC
Q psy782           33 KPLNLGQGFP--DYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIER   92 (100)
Q Consensus        33 ~~i~l~~G~P--~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~   92 (100)
                      ..|+|..|..  .+...++.+.+++.+.+...   .+.| ...|..+++.++++++.+.++.
T Consensus        55 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~---~~~~-~~~~~~~~~~~la~~l~~~~~~  112 (476)
T 3i5t_A           55 RLIDGPAGMWCAQVGYGRREIVDAMAHQAMVL---PYAS-PWYMATSPAARLAEKIATLTPG  112 (476)
T ss_dssp             EEEETTHHHHTCTTCBCCHHHHHHHHHHHHHC---CCCC-TTTCBCHHHHHHHHHHHTTSST
T ss_pred             EEEECCCchhhccCCCCCHHHHHHHHHHHHhc---cCcc-cCccCCHHHHHHHHHHHhcCCC
Confidence            4688887732  33235678999998888764   3323 3367788999999999887653

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=88.67  E-value=1.1  Score=31.60  Aligned_cols=67  Identities=16%  Similarity=0.152  Sum_probs=40.5

Q ss_pred             hHHHHHHHhhcCC-----CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCC---CCCCHHHHHHHHHHHhhhhC
Q psy782           20 SVWVEFIQLSLDH-----KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTR---GFGHPRIVQAIAKLYSSLIE   91 (100)
Q Consensus        20 ~~~~~~~~~~~~~-----~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~---~~G~~~LR~aia~~~~~~~g   91 (100)
                      .+++.+.+++.+.     .++.|+ |.... ..|+.+ +++.+.+ .   ..+.|.+   ..|..++++++++++.+.+|
T Consensus        49 ~~~~~~~~l~~~~~~~~~~~~~lg-~~~~~-~~p~v~-~~~~~~~-~---~~~~~~~~~~~~g~~~l~~~l~~~la~~~g  121 (474)
T 1wyu_B           49 TLVRHYTGLSRRQVGVDTTFYPLG-SCTMK-YNPKLH-EEAARLF-A---DLHPYQDPRTAQGALRLMWELGEYLKALTG  121 (474)
T ss_dssp             HHHHHHHHHHTTCCCTTTSCCCBT-TTCCC-CCCHHH-HHHHHTT-S---SCCTTSCGGGCHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCcccCccccc-ccccc-CCHHHH-HHHHHHH-H---hcCCCCchhhChHHHHHHHHHHHHHHHHHC
Confidence            3455555555432     468888 64433 344433 3333322 1   1345554   67889999999999999888


Q ss_pred             CC
Q psy782           92 RP   93 (100)
Q Consensus        92 ~~   93 (100)
                      ++
T Consensus       122 ~~  123 (474)
T 1wyu_B          122 MD  123 (474)
T ss_dssp             CS
T ss_pred             CC
Confidence            65

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=88.45  E-value=0.45  Score=32.37  Aligned_cols=47  Identities=15%  Similarity=0.125  Sum_probs=31.8

Q ss_pred             ceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhh
Q psy782           34 PLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSS   88 (100)
Q Consensus        34 ~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~   88 (100)
                      .|+|..|.|.+   ++++.+++.+++...     .|.+..+..+||++||+++..
T Consensus         3 ~~~~~~~~~~~---~~~~~~a~~~~~~~~-----~~~~~~~~~~l~~~la~~~~~   49 (390)
T 3b8x_A            3 MINYPLASSTW---DDLEYKAIQSVLDSK-----MFTMGEYVKQYETQFAKTFGS   49 (390)
T ss_dssp             --CBCSCCCCC---CHHHHHHHHHHHHHT-----CCSSCHHHHHHHHHHHHHHTC
T ss_pred             ceeccCCCCCC---CHHHHHHHHHHHHcC-----CCCCChHHHHHHHHHHHHHCC
Confidence            45565555544   455667788877653     366678899999999999854

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=88.24  E-value=0.56  Score=32.70  Aligned_cols=55  Identities=5%  Similarity=-0.139  Sum_probs=37.9

Q ss_pred             CceecCCCCCC--CCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCC
Q psy782           33 KPLNLGQGFPD--YESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIER   92 (100)
Q Consensus        33 ~~i~l~~G~P~--~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~   92 (100)
                      ..|+|..|.+.  +...++.+.+++.+.+++.   .+  ....|..+++.++++++.+.++.
T Consensus        50 ~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~---~~--~~~~~~~~~~~~la~~l~~~~~~  106 (452)
T 3n5m_A           50 RYLDGMSGLWCVNSGYGRKELAEAAYKQLQTL---SY--FPMSQSHEPAIKLAEKLNEWLGG  106 (452)
T ss_dssp             EEEETTHHHHTCTTCBCCHHHHHHHHHHHTTC---CC--CCTTSEEHHHHHHHHHHHHHHTS
T ss_pred             EEEECCcchhhccCCCCCHHHHHHHHHHHHhc---CC--cccccCCHHHHHHHHHHHHhCCC
Confidence            47999988422  2145688999999888764   22  33456677888888888776654

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=88.09  E-value=0.35  Score=34.31  Aligned_cols=56  Identities=13%  Similarity=-0.062  Sum_probs=40.1

Q ss_pred             CceecCCCC--CCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhC
Q psy782           33 KPLNLGQGF--PDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIE   91 (100)
Q Consensus        33 ~~i~l~~G~--P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g   91 (100)
                      ..|+|..|.  -.+...++.+.+++.+.+...   .++|+...+..+++.++++++.+.++
T Consensus        56 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~---~~~~~~~~~~~~~~~~lae~l~~~~~  113 (472)
T 3hmu_A           56 EILDAMAGLWCVNIGYGRDELAEVAARQMREL---PYYNTFFKTTHVPAIALAQKLAELAP  113 (472)
T ss_dssp             EEECTTHHHHTCTTCBCCHHHHHHHHHHHHHC---SCCCSSSSEECHHHHHHHHHHHHHSC
T ss_pred             EEEECCCchhhccCCCCCHHHHHHHHHHHHhc---cccccccccCCHHHHHHHHHHHHhCC
Confidence            478888773  223234678999999888765   44666666777888899998887654

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=87.89  E-value=0.81  Score=32.05  Aligned_cols=54  Identities=11%  Similarity=0.086  Sum_probs=39.8

Q ss_pred             ceecCCCCC--CCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhC
Q psy782           34 PLNLGQGFP--DYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIE   91 (100)
Q Consensus        34 ~i~l~~G~P--~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g   91 (100)
                      .|+|..|.+  .+...++.+.+++.+.+...    .+|+...|..+++.++++++.+.++
T Consensus        63 ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~----~~~~~~~~~~~~~~~la~~l~~~~~  118 (451)
T 3oks_A           63 LIDLGSGIAVTTVGNSAPKVVEAVRSQVGDF----THTCFMVTPYEGYVAVCEQLNRLTP  118 (451)
T ss_dssp             EEESSHHHHTCTTCTTCHHHHHHHHHHHTTC----SCCTTTTSCCHHHHHHHHHHHHHSS
T ss_pred             EEEcCCCccccccCCCCHHHHHHHHHHHHhc----ccccCCccCCHHHHHHHHHHHHhCC
Confidence            588887743  23224678899998888654    4577777888999999999988754

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=87.67  E-value=0.071  Score=36.04  Aligned_cols=53  Identities=9%  Similarity=-0.036  Sum_probs=36.2

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCc-ccC---CCCC-CCCCHHHHHHHHHHH
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENK-LLN---QYTR-GFGHPRIVQAIAKLY   86 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~-~~~---~Y~~-~~G~~~LR~aia~~~   86 (100)
                      .+.+.|..|.+..  +|+.+.+++.+.+..... ...   .|+. ..|..+||++||+++
T Consensus        15 ~~~i~l~~~~~~~--~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~   72 (390)
T 1elu_A           15 ANKTYFNFGGQGI--LPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF   72 (390)
T ss_dssp             TTSEECCTTTCCC--CCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCeEEecCCccCC--CCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHc
Confidence            4678999887544  557788888887765310 001   4544 468899999999986

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=87.45  E-value=0.82  Score=32.09  Aligned_cols=54  Identities=20%  Similarity=0.193  Sum_probs=39.6

Q ss_pred             ceecCCCCC--CCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhC
Q psy782           34 PLNLGQGFP--DYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIE   91 (100)
Q Consensus        34 ~i~l~~G~P--~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g   91 (100)
                      .|+|..|.+  .+...++.+.+++.+.+.+.    .+|+...|..+++.++++++.+.++
T Consensus        66 ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~----~~~~~~~~~~~~~~~la~~l~~~~~  121 (453)
T 4ffc_A           66 FIDLGAGIAVTTVGASHPAVAAAIADQATHF----THTCFMVTPYEQYVQVAELLNALTP  121 (453)
T ss_dssp             EEESSHHHHTCTTCTTCHHHHHHHHHHHHHC----SCCTTTTSCCHHHHHHHHHHHHHSS
T ss_pred             EEEcCCCcccCcCCCCCHHHHHHHHHHHHhc----cccccCcCCCHHHHHHHHHHHHhCC
Confidence            688887743  23124678889998888754    4577677888899999999988755

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=86.72  E-value=0.47  Score=32.84  Aligned_cols=51  Identities=8%  Similarity=-0.021  Sum_probs=34.5

Q ss_pred             CceecCCCCCCCC--CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           33 KPLNLGQGFPDYE--SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        33 ~~i~l~~G~P~~~--~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ..++|..|.....  ..++.+.+++.+.+.+.   .+.|.+..+..+|+++|++++
T Consensus        54 ~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~---~~~~~~~~~~~~l~~~la~~~  106 (429)
T 3k28_A           54 EYIDYVLSWGPLIHGHANDRVVEALKAVAERG---TSFGAPTEIENKLAKLVIERV  106 (429)
T ss_dssp             EEEESCGGGTTCTTCBSCHHHHHHHHHHHHHC---SCCSSCCHHHHHHHHHHHHHS
T ss_pred             EEEECCCChhhcccCCCCHHHHHHHHHHHhhC---cCcCCCCHHHHHHHHHHHHhC
Confidence            4789998865321  24688999999888765   222334556677777777765

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=86.09  E-value=0.49  Score=31.72  Aligned_cols=45  Identities=13%  Similarity=-0.010  Sum_probs=30.1

Q ss_pred             CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCC
Q psy782           46 SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERP   93 (100)
Q Consensus        46 ~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~   93 (100)
                      .+++.+.+++.+.+...   ...|....|..++++++.+++.+.+|++
T Consensus        41 ~~~~~v~~a~~~~~~~~---~~~~~~~~~~~~~~~~l~~~la~~~~~~   85 (397)
T 3f9t_A           41 NVLPITRKIVDIFLETN---LGDPGLFKGTKLLEEKAVALLGSLLNNK   85 (397)
T ss_dssp             CCCTHHHHHHHHHTTCC---TTSGGGBHHHHHHHHHHHHHHHHHTTCT
T ss_pred             CCcHHHHHHHHHHHhhc---CCCcccChhHHHHHHHHHHHHHHHhCCC
Confidence            44557788888877654   3333323366788888888888877753

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=86.05  E-value=1.1  Score=30.85  Aligned_cols=52  Identities=13%  Similarity=0.112  Sum_probs=35.9

Q ss_pred             CceecCCCCCC--CCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhC
Q psy782           33 KPLNLGQGFPD--YESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIE   91 (100)
Q Consensus        33 ~~i~l~~G~P~--~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g   91 (100)
                      .+|+|+.|.+.  +..+++.+.+++.+.++..   . .|+   +..++++++++++.+.++
T Consensus        53 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~---~-~~~---~~~~~~~~l~~~l~~~~~  106 (424)
T 2e7u_A           53 RYLDYVMSWGPLILGHAHPKVLARVRETLERG---L-TFG---APSPLEVALAKKVKRAYP  106 (424)
T ss_dssp             EEEESSGGGTTCTTCBTCHHHHHHHHHHHHTC---S-CCS---SCCHHHHHHHHHHHHHCT
T ss_pred             EEEEccccccccccCCCCHHHHHHHHHHHHhC---C-CCC---CCCHHHHHHHHHHHHhCC
Confidence            47899988643  2135788999999988764   2 232   456678888888877653

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=85.61  E-value=1.1  Score=30.79  Aligned_cols=52  Identities=10%  Similarity=0.075  Sum_probs=36.3

Q ss_pred             CceecCCCCCCCC--CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhC
Q psy782           33 KPLNLGQGFPDYE--SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIE   91 (100)
Q Consensus        33 ~~i~l~~G~P~~~--~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g   91 (100)
                      ..++|+.|.+...  ..++.+.+++.+.+...   . .|+.   ..+++.++++++.+.++
T Consensus        53 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~---~-~~~~---~~~~~~~la~~l~~~~~  106 (427)
T 3fq8_A           53 RYIDYVGTWGPAICGHAHPEVIEALKVAMEKG---T-SFGA---PCALENVLAEMVNDAVP  106 (427)
T ss_dssp             EEEESSGGGTTCTTCBTCHHHHHHHHHHHTTC---S-CCSS---CCHHHHHHHHHHHHHST
T ss_pred             EEEECCCchhhhccCCCCHHHHHHHHHHHHhC---C-CcCC---CCHHHHHHHHHHHHhCC
Confidence            4799999875431  35788999999888764   2 2432   45688888888877654

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=85.52  E-value=0.11  Score=35.17  Aligned_cols=36  Identities=8%  Similarity=0.067  Sum_probs=28.4

Q ss_pred             hHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhh
Q psy782           48 PSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSS   88 (100)
Q Consensus        48 p~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~   88 (100)
                      ++.+.+++.+++...     .|.+..+..+||++||+++..
T Consensus        16 ~~~~~~a~~~~~~~~-----~~~~~~~~~~l~~~la~~~~~   51 (373)
T 3frk_A           16 EYEIKFKFEEIYKRN-----WFILGDEDKKFEQEFADYCNV   51 (373)
T ss_dssp             HHHHHHHHHHHHHHT-----CCSSSHHHHHHHHHHHHHHTS
T ss_pred             CHHHHHHHHHHHHCC-----CccCCchHHHHHHHHHHHhCC
Confidence            467788888877654     377778899999999999854

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=84.49  E-value=1.5  Score=30.99  Aligned_cols=45  Identities=18%  Similarity=0.155  Sum_probs=37.7

Q ss_pred             CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCC
Q psy782           46 SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERP   93 (100)
Q Consensus        46 ~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~   93 (100)
                      .+|..+.+.+..++...   ...|....|..+|.+++++++.+.+|.+
T Consensus        90 ~~~~~~~~~~~~~~n~~---~~~~~~~p~~~~lE~~v~~~l~~l~g~~  134 (481)
T 4e1o_A           90 SWPSLLGDMLADAINCL---GFTWASSPACTELEMNVMDWLAKMLGLP  134 (481)
T ss_dssp             CHHHHHHHHHHHHHCCC---CSSTTTCHHHHHHHHHHHHHHHHHHTCC
T ss_pred             CHHHHHHHHHHHHhCcc---cCCcCCCcHHHHHHHHHHHHHHHHhCCC
Confidence            44677888888888765   6789888899999999999999988875

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=84.47  E-value=1.2  Score=30.99  Aligned_cols=55  Identities=4%  Similarity=-0.214  Sum_probs=39.6

Q ss_pred             CceecCCCCC--CCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhC
Q psy782           33 KPLNLGQGFP--DYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIE   91 (100)
Q Consensus        33 ~~i~l~~G~P--~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g   91 (100)
                      ..|+|..|.+  .....++.+.+++.+.+...    ..|....|..+++.++++++.+.++
T Consensus        45 ~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~----~~~~~~~~~~~~~~~la~~l~~~~~  101 (448)
T 3dod_A           45 EYYDGFSSVWLNVHGHRKKELDDAIKKQLGKI----AHSTLLGMTNVPATQLAETLIDISP  101 (448)
T ss_dssp             EEEETTHHHHTCSSCBSCHHHHHHHHHHHTTC----SCCCCSSSEEHHHHHHHHHHHHHSC
T ss_pred             EEEECCcchhhccCCCCCHHHHHHHHHHHHhc----cCccccccCCHHHHHHHHHHHHhCC
Confidence            4789888753  23234688999999888654    3455566778899999999988754

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=84.19  E-value=0.48  Score=32.20  Aligned_cols=54  Identities=6%  Similarity=0.105  Sum_probs=31.2

Q ss_pred             CceecCCCCC--CCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhC
Q psy782           33 KPLNLGQGFP--DYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIE   91 (100)
Q Consensus        33 ~~i~l~~G~P--~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g   91 (100)
                      .+++|+.|.|  ++.++++.+.+++.+.++........| +    .++++++.+++.+.+|
T Consensus        46 ~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~~-~----~~~~~~l~~~la~~~~  101 (395)
T 1vef_A           46 EYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQTL-P----TPMRGEFYRTLTAILP  101 (395)
T ss_dssp             EEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTS-C----CHHHHHHHHHHHHTSC
T ss_pred             EEEEccCccccccCCCCCHHHHHHHHHHHHhCCCCcccc-C----CHHHHHHHHHHHHhcC
Confidence            4789999864  231367889999999887641111123 2    3344555555544444

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=82.67  E-value=0.45  Score=31.62  Aligned_cols=46  Identities=17%  Similarity=0.062  Sum_probs=30.5

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCC-C-CCCHHHHHHHHHHHh
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTR-G-FGHPRIVQAIAKLYS   87 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~-~-~G~~~LR~aia~~~~   87 (100)
                      ++++|+.| |..  +++.+.+++.+.+      .+.|+. . .+..+||++||+++.
T Consensus         4 ~~~~~~~g-p~~--~~~~v~~a~~~~~------~~~~~~~~~~~~~~l~~~la~~~g   51 (366)
T 1m32_A            4 NYLLLTPG-PLT--TSRTVKEAMLFDS------CTWDDDYNIGVVEQIRQQLTALAT   51 (366)
T ss_dssp             -CEECSSS-SCC--CCHHHHHTTCCCC------CTTSHHHHTTTHHHHHHHHHHHHC
T ss_pred             ccccccCC-CcC--CCHHHHHHHhhhh------cCCCHHHHHHHHHHHHHHHHHHhC
Confidence            36899999 644  5667777765421      122321 2 788999999999874

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=81.60  E-value=0.64  Score=31.11  Aligned_cols=50  Identities=6%  Similarity=-0.044  Sum_probs=30.7

Q ss_pred             eecCCCCCCCCCchHHHHHHHHHHHhcCCcc-----cCCCCCCCCCHHHHHHHHHHH
Q psy782           35 LNLGQGFPDYESAPSHVSKGLADAATGENKL-----LNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        35 i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~-----~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      +-|..+....  +++.+.+++.+.+.+....     ..+|....|..+||++||+++
T Consensus         3 ~yld~~~~~~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~   57 (384)
T 1eg5_A            3 VYFDNNATTR--VDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL   57 (384)
T ss_dssp             EECBTTTCCC--CCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCccCC--CCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHc
Confidence            3444444433  5677888888877642100     012444567789999999887

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=81.34  E-value=1.5  Score=30.46  Aligned_cols=54  Identities=22%  Similarity=0.216  Sum_probs=34.3

Q ss_pred             ceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCC-----CCCCHHHHHHHHHHHhhhhCCC
Q psy782           34 PLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTR-----GFGHPRIVQAIAKLYSSLIERP   93 (100)
Q Consensus        34 ~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~-----~~G~~~LR~aia~~~~~~~g~~   93 (100)
                      +..++.|.|+. ..|+.+.+.+.+.   .  ...+|++     ..|..++.+++.+++.+.+|++
T Consensus        66 ~~~~~~g~~~~-~~p~~v~~~~~~~---~--~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~  124 (438)
T 1wyu_A           66 KAFLGGGVRSH-HVPPVVQALAARG---E--FLTAYTPYQPEVSQGVLQATFEYQTMIAELAGLE  124 (438)
T ss_dssp             TCCCCSSCCCC-CCCHHHHHHHTSH---H--HHHCCSCCSGGGCHHHHHHHHHHHHHHHHHHTSS
T ss_pred             ccccCCCccCC-cCcHHHHHHHhcc---h--hhhcCCCCcchhhhhHHHHHHHHHHHHHHHhCCC
Confidence            56899999988 7777775544211   1  1133544     5677777777777777777764

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=81.13  E-value=3.5  Score=28.31  Aligned_cols=55  Identities=2%  Similarity=-0.092  Sum_probs=32.3

Q ss_pred             CceecCCCCCC--CCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhC
Q psy782           33 KPLNLGQGFPD--YESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIE   91 (100)
Q Consensus        33 ~~i~l~~G~P~--~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g   91 (100)
                      ..++|+.|.+.  +..+++.+.+++.+.++..   .+ |+...+..+++.++++.+.+.+|
T Consensus        44 ~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~---~~-~~~~~~~~~~~~~l~~~la~~~~  100 (429)
T 1s0a_A           44 RLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAM---SH-VMFGGITHAPAIELCRKLVAMTP  100 (429)
T ss_dssp             EEEESSTTTTTCTTCBSCHHHHHHHHHHHHHC---SC-CCCSSEECHHHHHHHHHHHHHSC
T ss_pred             EEEEcCccHhhccCCCCCHHHHHHHHHHHHhc---cc-ccccccCCHHHHHHHHHHHHhCC
Confidence            47899998862  3135688999999888654   11 21111123445556666655554

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=81.07  E-value=2.8  Score=28.50  Aligned_cols=46  Identities=4%  Similarity=-0.112  Sum_probs=32.5

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCC
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERP   93 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~   93 (100)
                      ++|+|+.|.|+. ++++.+.+++.     .   ...|      ..+.+++++.+++.+|.+
T Consensus        29 ~v~~~~~~~~~~-~~~~~v~~a~~-----~---~~~~------~~~~~~~~~~~a~~~g~~   74 (374)
T 2aeu_A           29 ALYDLSGLSGGF-LIDEKDKALLN-----T---YIGS------SYFAEKVNEYGLKHLGGD   74 (374)
T ss_dssp             GCEECSSCCCCC-CCCHHHHHHHT-----S---TTHH------HHHHHHHHHHHHHHHTCC
T ss_pred             ceeeecccCCCC-CCCHHHHHHHH-----H---hcCc------hHHHHHHHHHHHHHhCCC
Confidence            689999999888 88888888774     1   1111      456677777776666763

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=80.97  E-value=1.6  Score=30.02  Aligned_cols=55  Identities=11%  Similarity=-0.013  Sum_probs=35.6

Q ss_pred             CceecCCCCC--CCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCC
Q psy782           33 KPLNLGQGFP--DYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIER   92 (100)
Q Consensus        33 ~~i~l~~G~P--~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~   92 (100)
                      ..++|..|.+  ++...++.+.+++.+.+...   .+ + ...+..+++.++++++.+.+|+
T Consensus        44 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~---~~-~-~~~~~~~~~~~l~~~la~~~~~  100 (433)
T 1zod_A           44 AILDFTSGQMSAVLGHCHPEIVSVIGEYAGKL---DH-L-FSEMLSRPVVDLATRLANITPP  100 (433)
T ss_dssp             EEEETTHHHHTCTTCBTCHHHHHHHHHHHHHC---CC-C-CTTCCCHHHHHHHHHHHHHSCT
T ss_pred             EEEEcccchhccccCCCCHHHHHHHHHHHHhC---cc-c-ccccCCHHHHHHHHHHHHhCCC
Confidence            4678877765  33234678889998888654   11 2 2334456778888888777664

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=80.82  E-value=2.3  Score=28.81  Aligned_cols=55  Identities=13%  Similarity=0.059  Sum_probs=37.0

Q ss_pred             CCceecCCCCCC--CCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhC
Q psy782           32 HKPLNLGQGFPD--YESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIE   91 (100)
Q Consensus        32 ~~~i~l~~G~P~--~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g   91 (100)
                      ...++|+.|.+.  +...++.+.+++.+.+++.   .+.|  ..+..++++++++++.+.+|
T Consensus        36 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~---~~~~--~~~~~~~~~~l~~~la~~~~   92 (395)
T 3nx3_A           36 KKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKL---LHTS--NLYYNENIAAAAKNLAKASA   92 (395)
T ss_dssp             CEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTC---SCCC--TTSBCHHHHHHHHHHHHHHT
T ss_pred             CEEEECCCcHHhccCCCCCHHHHHHHHHHHHhc---cccc--cccCCHHHHHHHHHHHHhcC
Confidence            357999988543  2134688899999888654   3333  33456778888888877665

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=80.80  E-value=0.28  Score=32.84  Aligned_cols=49  Identities=16%  Similarity=0.121  Sum_probs=31.0

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHh
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   87 (100)
                      ..+-++.|.-.+ .+++.+.+++.+.+.     ...|++..+..+||++||+++.
T Consensus        14 ~~~~~~~~~~~~-g~~p~v~~ai~~~~~-----~~~~~~~~~~~~l~~~la~~~~   62 (359)
T 3pj0_A           14 PYKLGGNGPRNV-GVLTEALQNIDDNLE-----SDIYGNGAVIEDFETKIAKILG   62 (359)
T ss_dssp             SEESSSSSCCBH-HHHHHHTTTSCTTCB-----CCBTTBSHHHHHHHHHHHHHHT
T ss_pred             chhhcCCCcccc-CCCHHHHHHHHhhcc-----cCcccCCHHHHHHHHHHHHHhC
Confidence            333344433333 345777777766322     3568777888999999998874

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=80.49  E-value=0.98  Score=30.83  Aligned_cols=40  Identities=18%  Similarity=0.218  Sum_probs=25.2

Q ss_pred             CCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCC--CHHHHHHHHHHHhh
Q psy782           40 GFPDYESAPSHVSKGLADAATGENKLLNQYTRGFG--HPRIVQAIAKLYSS   88 (100)
Q Consensus        40 G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G--~~~LR~aia~~~~~   88 (100)
                      +.|..   ++++.+++.+++..      +|.+..|  ..+||++||+++..
T Consensus         6 ~~p~~---~~~v~~a~~~~~~~------~~~~~~g~~~~~l~~~la~~~~~   47 (394)
T 1o69_A            6 SPPHM---GGNELKYIEEVFKS------NYIAPLGEFVNRFEQSVKDYSKS   47 (394)
T ss_dssp             ---------CCHHHHHHHHHHH------TTTSCTTHHHHHHHHHHHHHHCC
T ss_pred             CCCCC---CHHHHHHHHHHHHc------CCccCCChHHHHHHHHHHHHhCC
Confidence            44544   24566777777654      2666678  89999999999843

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=80.36  E-value=5.4  Score=27.24  Aligned_cols=49  Identities=8%  Similarity=-0.002  Sum_probs=31.6

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCC---------CCCHHHHHHHHHHH
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRG---------FGHPRIVQAIAKLY   86 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~---------~G~~~LR~aia~~~   86 (100)
                      .+.+.|..+.+..  +++.+.+++.+.+...    ..|+..         .+..+||++||+++
T Consensus        17 ~~~~~Ld~~~~~~--~~~~v~~a~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~la~~~   74 (432)
T 3a9z_A           17 NRKVYMDYNATTP--LEPEVIQAVTEAMKEA----WGNPSSSYVAGRKAKDIINTARASLAKMI   74 (432)
T ss_dssp             -CCEECBTTTCCC--CCHHHHHHHHHHHHHC----CSCTTCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEeeCCccCC--CCHHHHHHHHHHHHHh----cCCCccCcHHHHHHHHHHHHHHHHHHHHc
Confidence            3678888887765  4667788888877542    234321         11358888888876

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=80.15  E-value=1.2  Score=30.67  Aligned_cols=51  Identities=14%  Similarity=0.151  Sum_probs=32.0

Q ss_pred             CceecCCCCCC--CCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           33 KPLNLGQGFPD--YESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        33 ~~i~l~~G~P~--~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ..++|..|...  +...++.+.+++.+.+...  ..+.| +.....+|+++|++++
T Consensus        56 ~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~~-~~~~~~~l~~~la~~~  108 (434)
T 3l44_A           56 KYIDYLAAYGPIITGHAHPHITKAITTAAENG--VLYGT-PTALEVKFAKMLKEAM  108 (434)
T ss_dssp             EEEECCGGGTTCSSCBTCHHHHHHHHHHHHHC--SCCSS-CCHHHHHHHHHHHHHC
T ss_pred             EEEECCCchhccccCCCCHHHHHHHHHHHHhC--cCCCC-CCHHHHHHHHHHHHhC
Confidence            47889888643  2134678889998888764  12344 3445556666666654

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=80.04  E-value=1.7  Score=30.31  Aligned_cols=52  Identities=8%  Similarity=0.077  Sum_probs=30.3

Q ss_pred             ceecCCCCCCCC-C-chHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           34 PLNLGQGFPDYE-S-APSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        34 ~i~l~~G~P~~~-~-pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      .|+|..|.+... . +++.+.+++.+.+.........| +..-..+|++.|++++
T Consensus        78 ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~  131 (439)
T 2oat_A           78 YFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAF-YNNVLGEYEEYITKLF  131 (439)
T ss_dssp             EEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCCCTTS-EESSHHHHHHHHHHHH
T ss_pred             EEEccCCcccccCCCCCHHHHHHHHHHHHhcCcccCcc-CCHHHHHHHHHHHHhc
Confidence            689998876442 3 67899999999887641111123 1223345555555543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	100
d2r5ea1	418	c.67.1.1 (A:12-429) Kynurenine--oxoglutarate trans	3e-21
d1w7la_	418	c.67.1.1 (A:) Kynurenine--oxoglutarate transaminas	4e-15
d1u08a_	382	c.67.1.1 (A:) Putative methionine aminotransferase	2e-12
d1v2da_	368	c.67.1.1 (A:) Glutamine aminotransferase {Thermus	6e-11
d1vp4a_	420	c.67.1.1 (A:) Putative aminotransferase TM1131 {Th	5e-10
d1wsta1	403	c.67.1.1 (A:13-415) Multiple substrate aminotransf	2e-07
d1gdea_	388	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	6e-07
d2gb3a1	389	c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotog	1e-06
d1bw0a_	412	c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Try	2e-06
d1j32a_	388	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pho	3e-05
d1o4sa_	375	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	4e-04
d1b5pa_	382	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	7e-04
d1xi9a_	395	c.67.1.1 (A:) Putative alanine aminotransferase {P	0.001

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

 Score = 84.1 bits (206), Expect = 3e-21
 Identities = 55/94 (58%), Positives = 68/94 (72%), Gaps = 1/94 (1%)

Query: 7   KFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLL 66
           KF LP R++ S  SVWVE+IQL+  +KPLNLGQGFPDY  AP +    LA AA   + L 
Sbjct: 1   KFDLPKRYQGSTKSVWVEYIQLAAQYKPLNLGQGFPDYH-APKYALNALAAAANSPDPLA 59

Query: 67  NQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV 100
           NQYTRGFGHPR+VQA++KLYS L++R + P   V
Sbjct: 60  NQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEV 93

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.7 bits (161), Expect = 4e-15
 Identities = 31/88 (35%), Positives = 53/88 (60%), Gaps = 2/88 (2%)

Query: 13  RFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRG 72
           R +   Y+ WVEF++L+ +H  +NLGQGFPD+   P    +    A +G + +LNQYT+ 
Sbjct: 6   RLDGIDYNPWVEFVKLASEHDVVNLGQGFPDFP-PPDFAVEAFQHAVSG-DFMLNQYTKT 63

Query: 73  FGHPRIVQAIAKLYSSLIERPLLPHQLV 100
           FG+P + + +A  +  L+ + + P + V
Sbjct: 64  FGYPPLTKILASFFGELLGQEIDPLRNV 91

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

 Score = 59.0 bits (141), Expect = 2e-12
 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 4/81 (4%)

Query: 20  SVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIV 79
           +++ +   L+  H+ +NL QGFPD++  P ++ + LA       +  NQY    G   + 
Sbjct: 14  TIFTQMSALAQQHQAINLSQGFPDFD-GPRYLQERLAHHV---AQGANQYAPMTGVQALR 69

Query: 80  QAIAKLYSSLIERPLLPHQLV 100
           +AIA+    L          +
Sbjct: 70  EAIAQKTERLYGYQPDADSDI 90

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]} Length = 368

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

 Score = 55.1 bits (131), Expect = 6e-11
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 5/75 (6%)

Query: 10 LPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQY 69
          L PR EA+  S++     L+     +NLGQGFP     P  + + +  A        +QY
Sbjct: 3  LHPRTEAAKESIFPRMSGLAQRLGAVNLGQGFPSNP-PPPFLLEAVRRALGR----QDQY 57

Query: 70 TRGFGHPRIVQAIAK 84
              G P + +A+A+
Sbjct: 58 APPAGLPALREALAE 72

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]} Length = 420

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

 Score = 52.5 bits (124), Expect = 5e-10
 Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 10/103 (9%)

Query: 1   MSSQASKFA--LPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAP-SHVSKGLAD 57
           +  + SK    +         S+  E ++ + D   ++ G G PD E+ P   +++   +
Sbjct: 12  LEGKISKIGQNMKS-------SIIREILKFAADKDAISFGGGVPDPETFPRKELAEIAKE 64

Query: 58  AATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV 100
               E     QY+   G P + Q I KL   +     L    +
Sbjct: 65  IIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNL 107

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]} Length = 403

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

 Score = 45.4 bits (106), Expect = 2e-07
 Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 1/69 (1%)

Query: 20 SVWVEFIQLSLDHKPLNLGQGFPDYESAP-SHVSKGLADAATGENKLLNQYTRGFGHPRI 78
          S   E ++L      ++L  G P  E+ P   + K   +          QY    G   +
Sbjct: 17 SEVRELLKLVETSDVISLAGGLPAPETFPVETIKKIAVEVLEEHADKALQYGTTKGFTPL 76

Query: 79 VQAIAKLYS 87
            A+A+   
Sbjct: 77 RLALARWME 85

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score = 43.7 bits (102), Expect = 6e-07
 Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 5/93 (5%)

Query: 9   ALPPRFEASVYSVWVEFIQLSLDHKP-LNLGQGFPDYESAPSHVSKGLADAATGENKLLN 67
           AL  R E    S   +   ++   K  ++LG G PD++  P H+ +   +A    +K L 
Sbjct: 1   ALSDRLELVSASEIRKLFDIAAGMKDVISLGIGEPDFD-TPQHIKEYAKEAL---DKGLT 56

Query: 68  QYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV 100
            Y    G   + +AIA+           P   +
Sbjct: 57  HYGPNIGLLELREAIAEKLKKQNGIEADPKTEI 89

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]} Length = 389

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

 Score = 42.9 bits (99), Expect = 1e-06
 Identities = 10/56 (17%), Positives = 20/56 (35%), Gaps = 5/56 (8%)

Query: 32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS 87
           +  +L  G PD +  P    + + +        +  Y+   G   + +A A  Y 
Sbjct: 28 VRIHHLNIGQPDLK-TPEVFFERIYENKPE----VVYYSHSAGIWELREAFASYYK 78

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 42.2 bits (97), Expect = 2e-06
 Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 6/69 (8%)

Query: 23 VEFIQLSLDHKP-LNLGQGFPDYES---APSHVSKGLADAATGENKLLNQYTRGFGHPRI 78
           +  + S   KP + L  G P  +      +   K L +A   +++  N Y    G P  
Sbjct: 20 SDNAKPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAI--DSQECNGYFPTVGSPEA 77

Query: 79 VQAIAKLYS 87
           +A+A  + 
Sbjct: 78 REAVATWWR 86

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

 Score = 38.6 bits (89), Expect = 3e-05
 Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 4/69 (5%)

Query: 32  HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIE 91
               +   G PD+   P H+ +    A     +   +Y    G PR+ +AIA+       
Sbjct: 30  IDVCSFSAGEPDFN-TPKHIVEAAKAAL---EQGKTRYGPAAGEPRLREAIAQKLQRDNG 85

Query: 92  RPLLPHQLV 100
                  ++
Sbjct: 86  LCYGADNIL 94

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]} Length = 375

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

 Score = 35.4 bits (80), Expect = 4e-04
 Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 4/51 (7%)

Query: 32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAI 82
             +NL  G PD+   P  V +          K   +YT   G   + + I
Sbjct: 28 EDVINLTAGEPDFP-TPEPVVEEAVRFL---QKGEVKYTDPRGIYELREGI 74

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

 Score = 34.7 bits (79), Expect = 7e-04
 Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIE 91
             + L  G PD++  P HV +    A     +   +Y    G P + +A+A+ +     
Sbjct: 31 VDLVALTAGEPDFD-TPEHVKEAARRAL---AQGKTKYAPPAGIPELREALAEKFRRENG 86

Query: 92 RPLLPHQ 98
            + P +
Sbjct: 87 LSVTPEE 93

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]} Length = 395

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

 Score = 34.5 bits (78), Expect = 0.001
 Identities = 13/58 (22%), Positives = 20/58 (34%), Gaps = 5/58 (8%)

Query: 32 HKPLNLGQGFPDYE--SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS 87
           K + L  G P       P H+ +    A     +  N Y    G P + +AI +   
Sbjct: 30 IKVIRLNIGDPVKFDFQPPEHMKEAYCKAI---KEGHNYYGDSEGLPELRKAIVEREK 84

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	100
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	99.78
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	99.77
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	99.7
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	99.69
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	99.69
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	99.67
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	99.65
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	99.65
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	99.62
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	99.61
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	99.6
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	99.56
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	99.47
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	99.41
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	99.28
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	99.08
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	99.07
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	98.96
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	98.93
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	98.91
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	98.84
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	98.84
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	98.47
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	98.23
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	98.05
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	94.14
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	93.8
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	91.02
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	90.56

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=99.78  E-value=5e-19  Score=123.01  Aligned_cols=92  Identities=59%  Similarity=0.989  Sum_probs=83.2

Q ss_pred             CCCChhhcccchhHHHHHHHhhcCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHh
Q psy782            8 FALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus         8 ~~~s~r~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   87 (100)
                      |.++.|++.+.++.|.++.+++.++++|+|++|+|++ +||+.+++++.+++++.....++|++..|+++||++||++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~G~Pd~-~~p~~i~eal~~a~~~~~~~~~~Y~~~~G~~~lReaiA~~~~   80 (418)
T d2r5ea1           2 FDLPKRYQGSTKSVWVEYIQLAAQYKPLNLGQGFPDY-HAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYS   80 (418)
T ss_dssp             CCCCGGGTTCCCCHHHHHHHHHHHHCCEECSSSCCSS-CCCHHHHHHHHHHHTCSCGGGGSCCCTTCCHHHHHHHHHHHH
T ss_pred             CchhhhhcCCCCCHHHHHHHHhcCCCCEEccCCCCCC-CCCHHHHHHHHHHHhCCCccCcCCCCCCCCHHHHHHHHHHHH
Confidence            5689999999999999999998888999999999999 889999999999998765557899999999999999999999


Q ss_pred             hhhCCCCCCCCCC
Q psy782           88 SLIERPLLPHQLV  100 (100)
Q Consensus        88 ~~~g~~~~~~~eI  100 (100)
                      +.+|+.++|.++|
T Consensus        81 ~~~g~~~~p~~~I   93 (418)
T d2r5ea1          81 QLVDRTINPMTEV   93 (418)
T ss_dssp             HHHTSCCCTTTSE
T ss_pred             HHhCCCCCccceE
Confidence            9999999874354

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=8.7e-19  Score=120.58  Aligned_cols=88  Identities=23%  Similarity=0.332  Sum_probs=80.6

Q ss_pred             CCChhhcccchhHHHHHHHhhcCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhh
Q psy782            9 ALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSS   88 (100)
Q Consensus         9 ~~s~r~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~   88 (100)
                      .+++|+..+...++.++.++++++++|+|++|+|++ +||+.+++++.++++++   .++|++..|+++||++||+++++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~a~~~~~i~l~~G~Pd~-~~p~~i~~a~~~~~~~~---~~~Y~~~~G~~~LReaia~~~~~   78 (382)
T d1u08a_           3 IPQSKLPQLGTTIFTQMSALAQQHQAINLSQGFPDF-DGPRYLQERLAHHVAQG---ANQYAPMTGVQALREAIAQKTER   78 (382)
T ss_dssp             CCCCSCCCCCCCHHHHHHHHHHHTTCEECCCSSCSS-CCCHHHHHHHHHHHHTT---CCSCCCTTCCHHHHHHHHHHHHH
T ss_pred             CchhhCCCCCCcHHHHHHHHhccCCCEEccCCCCCC-CCCHHHHHHHHHHHhcC---CCCCCCCcCCHHHHHHHHHHHHH
Confidence            467888889999999999999889999999999999 89999999999999876   78999999999999999999999


Q ss_pred             hhCCCCCCCCCC
Q psy782           89 LIERPLLPHQLV  100 (100)
Q Consensus        89 ~~g~~~~~~~eI  100 (100)
                      .+|+.++++++|
T Consensus        79 ~~g~~~~~~~~I   90 (382)
T d1u08a_          79 LYGYQPDADSDI   90 (382)
T ss_dssp             HHSCCCCTTTTE
T ss_pred             HhCCCCCCCceE
Confidence            999999887544

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=99.70  E-value=1e-17  Score=115.47  Aligned_cols=91  Identities=15%  Similarity=0.125  Sum_probs=81.6

Q ss_pred             CCChhhcccchhHHHHHHHhhcCCCceecCCCCCCCC-CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHh
Q psy782            9 ALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYE-SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus         9 ~~s~r~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~-~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   87 (100)
                      .+|++++.+..|.|+++.+++.++++|+|++|+|+++ +|.+.+.+++.++++......++|+++.|+++||++||+++.
T Consensus         6 ~~~~~~~~~~~s~ire~~~~~~~~~~i~l~~G~P~~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aia~~l~   85 (403)
T d1wsta1           6 FFSEKAMLMKASEVRELLKLVETSDVISLAGGLPAPETFPVETIKKIAVEVLEEHADKALQYGTTKGFTPLRLALARWME   85 (403)
T ss_dssp             GCCHHHHHCCCHHHHHHHHHHTSSSCEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCSSCCHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCcHHHHHHHHhCCCCcEECCCCCCCccccCHHHHHHHHHHHHHhCcccccCCCCCcCCHHHHHHHHHHHH
Confidence            4789999999999999999998999999999999987 778999999999887754456789999999999999999999


Q ss_pred             hhhCCCCCCCCCC
Q psy782           88 SLIERPLLPHQLV  100 (100)
Q Consensus        88 ~~~g~~~~~~~eI  100 (100)
                      +.+|.+++++ +|
T Consensus        86 ~~~g~~~~~~-~I   97 (403)
T d1wsta1          86 KRYDIPMSKV-EI   97 (403)
T ss_dssp             HHHCCCCTTC-EE
T ss_pred             HHhCCCCChH-He
Confidence            9999999887 54

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=99.69  E-value=3.3e-17  Score=112.48  Aligned_cols=87  Identities=22%  Similarity=0.267  Sum_probs=77.3

Q ss_pred             CCChhhcccchhHHHHHHHhh-----cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHH
Q psy782            9 ALPPRFEASVYSVWVEFIQLS-----LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIA   83 (100)
Q Consensus         9 ~~s~r~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia   83 (100)
                      .+|+|++.+.+|.+..+.+.+     .+.++|+|++|+|++ ++|+++++++.+++.++   .++|+++.|+++||++||
T Consensus         3 ~~~~r~~~~~~s~~~~i~~~a~~~~~~G~~vi~l~~g~p~~-~~p~~i~~a~~~~~~~~---~~~Y~~~~G~~~lR~~ia   78 (382)
T d1b5pa_           3 GLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDF-DTPEHVKEAARRALAQG---KTKYAPPAGIPELREALA   78 (382)
T ss_dssp             CCCHHHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSCSS-CCCHHHHHHHHHHHHTT---CCSCCCTTCCHHHHHHHH
T ss_pred             HHHHHHHhCCCCHHHHHHHHHHHHHhCCCCeEECCCCCCCC-CCCHHHHHHHHHHHhcC---CcCCCCCCCCHHHHHHHH
Confidence            589999999999988887643     245799999999999 99999999999999887   789999999999999999


Q ss_pred             HHHhhhhCCCCCCCCCC
Q psy782           84 KLYSSLIERPLLPHQLV  100 (100)
Q Consensus        84 ~~~~~~~g~~~~~~~eI  100 (100)
                      +++.+.+|+.++++ +|
T Consensus        79 ~~~~~~~~~~~~~~-~i   94 (382)
T d1b5pa_          79 EKFRRENGLSVTPE-ET   94 (382)
T ss_dssp             HHHHHTTCCCCCGG-GE
T ss_pred             hhhhhhcccccccc-cc
Confidence            99999899999987 54

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=99.69  E-value=1.3e-17  Score=115.07  Aligned_cols=88  Identities=19%  Similarity=0.210  Sum_probs=74.9

Q ss_pred             CCCChhhcccchhHHHHHHHhh-----cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHH
Q psy782            8 FALPPRFEASVYSVWVEFIQLS-----LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAI   82 (100)
Q Consensus         8 ~~~s~r~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~ai   82 (100)
                      |++++|++.+.++.+..+.+.+     .+.++|+|++|+|++ ++|+.+.+++.++++++   .++|+++.|.++||++|
T Consensus         1 m~~~~~~~~~~~s~~~~i~~~a~~~~~~g~~vi~l~~G~p~~-~~p~~v~~a~~~~~~~~---~~~Y~~~~G~~~lR~ai   76 (388)
T d1j32a_           1 MKLAARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDF-NTPKHIVEAAKAALEQG---KTRYGPAAGEPRLREAI   76 (388)
T ss_dssp             CCCCHHHHTSCCCSSTTTHHHHHHHHTTTCCCEECCCSSCSS-CCCHHHHHHHHHHHHTT---CCSCCCTTCCHHHHHHH
T ss_pred             CchhhHhhcCCcCHHHHHHHHHHHHHHCCCCeEECCCCCCCC-CCCHHHHHHHHHHHhcC---CCCCCCCCCCHHHHHHH
Confidence            5689999998888654444322     245799999999999 89999999999999876   78999999999999999


Q ss_pred             HHHHhhhhCCCCCCCCCC
Q psy782           83 AKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        83 a~~~~~~~g~~~~~~~eI  100 (100)
                      |+++.+.+|+.+++| +|
T Consensus        77 a~~~~~~~g~~~~~~-~i   93 (388)
T d1j32a_          77 AQKLQRDNGLCYGAD-NI   93 (388)
T ss_dssp             HHHHHHHHCCCCCGG-GE
T ss_pred             HHHHHHhcccCCCCc-eE
Confidence            999999999999887 54

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2.8e-17  Score=114.21  Aligned_cols=86  Identities=35%  Similarity=0.760  Sum_probs=77.5

Q ss_pred             CChhhcccchhHHHHHHHhhcCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhh
Q psy782           10 LPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSL   89 (100)
Q Consensus        10 ~s~r~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~   89 (100)
                      .++|++.+..+.|.++.+++.++++|+|++|+|++ +||+.+.+++.++++.+ ...++|+++.|+++||++||+++++.
T Consensus         3 ~~~r~~~~~~~~~~~~~~~~~~~dvI~l~~G~p~~-~~p~~v~~a~~~al~~~-~~~~~Y~~~~G~~~LReaia~~~~~~   80 (418)
T d1w7la_           3 QARRLDGIDYNPWVEFVKLASEHDVVNLGQGFPDF-PPPDFAVEAFQHAVSGD-FMLNQYTKTFGYPPLTKILASFFGEL   80 (418)
T ss_dssp             SCGGGTTCCCCTHHHHHHHHHTSCCEECCCCSCSS-CCCHHHHHHHHHHTSSC-GGGGSCCCTTCCHHHHHHHHHHHHHH
T ss_pred             cCccccCCCCCHHHHHHHHhCCCCCEECCCCCCCC-CCCHHHHHHHHHHHhCC-CcccCCCCCcCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999 88999999999998864 23568999999999999999999998


Q ss_pred             hCCCCCCC
Q psy782           90 IERPLLPH   97 (100)
Q Consensus        90 ~g~~~~~~   97 (100)
                      +|++++|+
T Consensus        81 ~g~~~~~~   88 (418)
T d1w7la_          81 LGQEIDPL   88 (418)
T ss_dssp             HTCCCCHH
T ss_pred             hCCCCCcc
Confidence            99988763

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=99.65  E-value=4.7e-17  Score=112.84  Aligned_cols=91  Identities=20%  Similarity=0.238  Sum_probs=79.4

Q ss_pred             CCChhhcccchhHHHHHHHhhcCCCceecCCCCCCCC-CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHh
Q psy782            9 ALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYE-SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus         9 ~~s~r~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~-~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   87 (100)
                      ++|++.+++.++.++++.+++..+++|+|+.|+||++ +|.+.+.+++.++++......++|+++.|+++||++||++++
T Consensus        15 ~~s~~~~~~~~s~ir~~~~~~~~~~~I~l~~G~Pd~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   94 (420)
T d1vp4a_          15 KISKIGQNMKSSIIREILKFAADKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLE   94 (420)
T ss_dssp             HCCHHHHTCCCCCHHHHTTTTTSTTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHH
T ss_pred             HHhHHHHhCCCcHHHHHHHHhCCCCcEecCCcCCCCccCCHHHHHHHHHHHHhhCCccccCCCCCcCCHHHHHHHHHHHH
Confidence            3788888888999999988888889999999999987 788999999999988764456899999999999999999999


Q ss_pred             hhhCCC-CCCCCCC
Q psy782           88 SLIERP-LLPHQLV  100 (100)
Q Consensus        88 ~~~g~~-~~~~~eI  100 (100)
                      +.+|++ ++++ +|
T Consensus        95 ~~~g~~~~~~~-~I  107 (420)
T d1vp4a_          95 RMYGITGLDED-NL  107 (420)
T ss_dssp             HHHCCCSCCGG-GE
T ss_pred             HHhCCCCCCHH-He
Confidence            999987 6776 54

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.65  E-value=1.7e-16  Score=108.72  Aligned_cols=87  Identities=22%  Similarity=0.304  Sum_probs=75.3

Q ss_pred             CChhhcccchhHHHHHHHhhc-CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhh
Q psy782           10 LPPRFEASVYSVWVEFIQLSL-DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSS   88 (100)
Q Consensus        10 ~s~r~~~~~~~~~~~~~~~~~-~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~   88 (100)
                      +|+|++.+..+.|+++...+. .+++|+|++|+|++ +||+.+++++.++++++   .++|++..|+++||++||+++.+
T Consensus         2 ~s~~~~~~~~s~ir~~~~~~~~~~dvi~l~~g~p~~-~~p~~v~~~~~~a~~~~---~~~Y~~~~G~~~lr~aia~~~~~   77 (388)
T d1gdea_           2 LSDRLELVSASEIRKLFDIAAGMKDVISLGIGEPDF-DTPQHIKEYAKEALDKG---LTHYGPNIGLLELREAIAEKLKK   77 (388)
T ss_dssp             HHHHHHHSCCCHHHHHHHHHHHCTTCEECCCCSCCS-CCCHHHHHHHHHHHHTT---CCSCCCTTCCHHHHHHHHHHHHH
T ss_pred             hhhhhhhCCccHHHHHHHHHhCCCCeEECCCCCCCC-CCCHHHHHHHHHHHhcC---ccCCCCCcCCHHHHHHHHHHHHh
Confidence            478899999999999998764 56899999999999 89999999999999876   78999999999999999999988


Q ss_pred             hhCCCCCCCCCC
Q psy782           89 LIERPLLPHQLV  100 (100)
Q Consensus        89 ~~g~~~~~~~eI  100 (100)
                      .++....++++|
T Consensus        78 ~~~~~~~~~~~i   89 (388)
T d1gdea_          78 QNGIEADPKTEI   89 (388)
T ss_dssp             HHCCCCCTTTSE
T ss_pred             hccccCCChhee
Confidence            777765554343

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=99.62  E-value=8.7e-17  Score=110.30  Aligned_cols=85  Identities=18%  Similarity=0.203  Sum_probs=71.7

Q ss_pred             CChhhcccchhHHHHHHHhh-----cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHH
Q psy782           10 LPPRFEASVYSVWVEFIQLS-----LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAK   84 (100)
Q Consensus        10 ~s~r~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~   84 (100)
                      +|+|+.++.+++|+++...+     .+.++|+|++|+|++ ++|+.+.+++.++. .+   .++|+++.|.++||++||+
T Consensus         1 ~~~r~~~~~~~~i~~l~~~a~~~~~~g~~vi~l~~G~p~~-~~p~~~~~al~~~~-~~---~~~Y~~~~G~~~LR~aia~   75 (389)
T d2gb3a1           1 FSDRVLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQPDL-KTPEVFFERIYENK-PE---VVYYSHSAGIWELREAFAS   75 (389)
T ss_dssp             CCHHHHSCCCCTTGGGHHHHHHHHHTTCEEEECSSCCCCS-CCCTHHHHHHHHTC-CS---SCCCCCTTCCHHHHHHHHH
T ss_pred             CChhhhcCCCCHHHHHHHHHHHHHHcCCCEEECCCCCCCC-CCCHHHHHHHHhcC-CC---CCCCCCCcCCHHHHHHHHH
Confidence            58899999999988775532     235789999999999 88999999887643 33   7899999999999999999


Q ss_pred             HHhhhhCCCCCCCCCC
Q psy782           85 LYSSLIERPLLPHQLV  100 (100)
Q Consensus        85 ~~~~~~g~~~~~~~eI  100 (100)
                      ++++.+|+.+++| +|
T Consensus        76 ~~~~~~g~~~~~~-~I   90 (389)
T d2gb3a1          76 YYKRRQRVDVKPE-NV   90 (389)
T ss_dssp             HHHHTSCCCCCGG-GE
T ss_pred             HHHHhcCCCcccc-eE
Confidence            9999899999988 54

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=99.61  E-value=5.2e-16  Score=107.10  Aligned_cols=85  Identities=19%  Similarity=0.226  Sum_probs=67.8

Q ss_pred             CCCChhhcccchhHHHHHHHhh-----cCCCceecCCCCC---CCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHH
Q psy782            8 FALPPRFEASVYSVWVEFIQLS-----LDHKPLNLGQGFP---DYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIV   79 (100)
Q Consensus         8 ~~~s~r~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~P---~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR   79 (100)
                      +.+|+|+..+. +.++++...+     .+.++|+|++|+|   ++ +||+++++++.++++++   .++|+++.|+++||
T Consensus         2 ~~~s~r~~~~~-~~ir~i~~~a~~l~~~G~~vi~l~~G~P~~~df-~~p~~i~~a~~~a~~~~---~~~Y~~~~G~~~LR   76 (395)
T d1xi9a_           2 IRASKRALSVE-YAIRDVVLPARELEKKGIKVIRLNIGDPVKFDF-QPPEHMKEAYCKAIKEG---HNYYGDSEGLPELR   76 (395)
T ss_dssp             CCCCHHHHTCC-C-------CHHHHHHTTCCCEECCCCCGGGTTC-CCCHHHHHHHHHHHHTT---CCSCCCTTCCHHHH
T ss_pred             ccchhccccCc-HHHHHHHHHHHHHHHCCCCeEECCCCCCCCCCC-CCCHHHHHHHHHHHhcC---CCCCCCCCCCHHHH
Confidence            46789999885 4566665422     2467999999999   66 78899999999999876   78999999999999


Q ss_pred             HHHHHHHhhhhCCCCCCC
Q psy782           80 QAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        80 ~aia~~~~~~~g~~~~~~   97 (100)
                      ++||+++++.+|+.++++
T Consensus        77 ~aia~~~~~~~g~~~~~~   94 (395)
T d1xi9a_          77 KAIVEREKRKNGVDITPD   94 (395)
T ss_dssp             HHHHHHHHHHHCCCCCGG
T ss_pred             HHHHHhhhhccccccccc
Confidence            999999999999999887

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=99.60  E-value=8.7e-16  Score=104.82  Aligned_cols=84  Identities=20%  Similarity=0.220  Sum_probs=71.6

Q ss_pred             CChhhcccchhHHHHHHHhh-----cCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHH
Q psy782           10 LPPRFEASVYSVWVEFIQLS-----LDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAK   84 (100)
Q Consensus        10 ~s~r~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~   84 (100)
                      +|+|+.++..+.+..+.+.+     ...++|+|++|+|++ +||+.+.+++.+++.++   .++|+++.|+++||++|++
T Consensus         1 ~~~r~~~~~~~~~~~~~~~a~~~~~~G~~vI~l~~G~p~~-~~p~~i~~~~~~~~~~~---~~~Y~~~~G~~~lR~aia~   76 (375)
T d1o4sa_           1 VSRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDF-PTPEPVVEEAVRFLQKG---EVKYTDPRGIYELREGIAK   76 (375)
T ss_dssp             CCHHHHHSCCCSSHHHHHHHHHHHHTTCCCEECCCSSCSS-CCCHHHHHHHHHHHTTC---CCCCCCTTCCHHHHHHHHH
T ss_pred             CchhhhhCCCCHHHHHHHHHHHHHHCCCCeEECCCcCCCC-CCCHHHHHHHHHHHhcC---CcCCCCCcCCHHHHHHHHh
Confidence            46788887777666665533     245799999999999 88999999999998876   6899999999999999999


Q ss_pred             HHhhhhCCCCCCC
Q psy782           85 LYSSLIERPLLPH   97 (100)
Q Consensus        85 ~~~~~~g~~~~~~   97 (100)
                      ++.+.+|+.++++
T Consensus        77 ~~~~~~~~~~~~~   89 (375)
T d1o4sa_          77 RIGERYKKDISPD   89 (375)
T ss_dssp             HHHHHHTCCCCGG
T ss_pred             hhhhccccccccc
Confidence            9999899998887

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.56  E-value=2.2e-15  Score=102.60  Aligned_cols=74  Identities=30%  Similarity=0.473  Sum_probs=64.9

Q ss_pred             CCCChhhcccchhHHHHHHHhhcCCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782            8 FALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus         8 ~~~s~r~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      |+++.|+..++.+++..+..++++.++|+|++|+|++ +||+.+.+++.+++.+    .++|+++.|.++||++||+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~la~~~~~I~ls~g~p~~-~~p~~i~~al~~~l~~----~~~Y~~~~G~~elr~aiA~~~   74 (368)
T d1v2da_           1 MRLHPRTEAAKESIFPRMSGLAQRLGAVNLGQGFPSN-PPPPFLLEAVRRALGR----QDQYAPPAGLPALREALAEEF   74 (368)
T ss_dssp             CCCCGGGGGC---CHHHHHHHHHHHTCEECCCCSCSS-CCCHHHHHHHHHHTTT----SCSCCCTTCCHHHHHHHHHHH
T ss_pred             CCCChhhhhcCCCHHHHHHHHhccCCCEEecCCCCCC-CCCHHHHHHHHHHhhc----ccCCCCCcCCHHHHHHHHhhc
Confidence            5789999999999999999988888999999999999 8999999999998754    478999999999999999987

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=99.47  E-value=6.4e-14  Score=96.29  Aligned_cols=63  Identities=11%  Similarity=0.145  Sum_probs=56.7

Q ss_pred             CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           31 DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        31 ~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      ..++|+|++|+||| +||+++++++.++++++   .++|+  .|.++||++||+++++++|++++++ +|
T Consensus        30 g~~vi~l~~g~pdf-~~p~~v~~al~~~~~~~---~~~Y~--~g~~~Lr~aia~~~~~~~g~~~~~~-~I   92 (394)
T d1c7na_          30 GNEVVPLSVADMEF-KNPPELIEGLKKYLDET---VLGYT--GPTEEYKKTVKKWMKDRHQWDIQTD-WI   92 (394)
T ss_dssp             CTTCCCCCSSSCSS-CCCHHHHHHHHHHHHHC---CCSSB--CCCHHHHHHHHHHHHHHHCCCCCGG-GE
T ss_pred             CCCeEEccCCCCCC-CCCHHHHHHHHHHHhCC---CcCCC--CCCHHHHHHHHHHHHHhcCCCCCCc-ce
Confidence            35799999999999 99999999999999887   78895  5899999999999999999999987 64

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=99.41  E-value=1.7e-13  Score=92.87  Aligned_cols=61  Identities=16%  Similarity=0.154  Sum_probs=55.6

Q ss_pred             ceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           34 PLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        34 ~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      +|+|++|+||| ++|+++++++.++++++   .++|++..| ++||++||+++++++|++++++ +|
T Consensus         1 ~~~~~~~~~df-~~p~~i~eal~~~~~~~---~~~Y~~~~g-~~lr~~ia~~~~~~~g~~~~~~-~i   61 (361)
T d1d2fa_           1 LLPFTISDMDF-ATAPCIIEALNQRLMHG---VFGYSRWKN-DEFLAAIAHWFSTQHYTAIDSQ-TV   61 (361)
T ss_dssp             CEECCSSSCSS-CCCHHHHHHHHHHHTTC---CCCCCCSCC-HHHHHHHHHHHHHHSCCCCCGG-GE
T ss_pred             CcCcCCCCCCC-CCCHHHHHHHHHHHhCC---CCCCCCCCC-HHHHHHHHHHHHHHhCCCCCcc-eE
Confidence            68999999999 99999999999999876   679999888 7899999999999999999987 54

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.28  E-value=3.3e-12  Score=87.92  Aligned_cols=74  Identities=18%  Similarity=0.207  Sum_probs=56.6

Q ss_pred             cchhHHHHHHHhhcC----CCceecCCCCCCCC---CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhh
Q psy782           17 SVYSVWVEFIQLSLD----HKPLNLGQGFPDYE---SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSL   89 (100)
Q Consensus        17 ~~~~~~~~~~~~~~~----~~~i~l~~G~P~~~---~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~   89 (100)
                      ...+.++.+.+.+..    .++|+|++|+|+++   ++++.+.+++.+++...  ..++|++..|+++||++||++++++
T Consensus        11 ~~~~pir~~~~~~~~~~~~~~vI~L~~G~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~LReaia~~~~~~   88 (412)
T d1bw0a_          11 LVFNPIRTVSDNAKPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQ--ECNGYFPTVGSPEAREAVATWWRNS   88 (412)
T ss_dssp             TCCCHHHHHHHTCCCCCSCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTT--CSSSCCCTTCCHHHHHHHHHHHHHH
T ss_pred             CCccHHHHHHHhcCCCCCCCCcEECcCCCCCCCCCccccHHHHHHHHHHhhCC--CCCCCCCCcCCHHHHHHHHHHHHHh
Confidence            345667777664322    36999999999874   23378888888887765  4789999999999999999999987


Q ss_pred             hCC
Q psy782           90 IER   92 (100)
Q Consensus        90 ~g~   92 (100)
                      ++.
T Consensus        89 ~~~   91 (412)
T d1bw0a_          89 FVH   91 (412)
T ss_dssp             HCC
T ss_pred             cCc
Confidence            643

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=99.08  E-value=5.1e-11  Score=81.53  Aligned_cols=82  Identities=16%  Similarity=0.050  Sum_probs=52.7

Q ss_pred             hhcccchhHHHHHHHhh---cCCCceecCCC---CCCCC-CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHH
Q psy782           13 RFEASVYSVWVEFIQLS---LDHKPLNLGQG---FPDYE-SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKL   85 (100)
Q Consensus        13 r~~~~~~~~~~~~~~~~---~~~~~i~l~~G---~P~~~-~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~   85 (100)
                      ++...+++.+..+.+..   ..++.|+|++|   +|+.. ++++.+++++.++++++  ..++|++..|+++||++||++
T Consensus         4 ~~~~~p~d~i~~~~~~~~~d~~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~~~~~~--~~~~Y~p~~G~~~lR~aia~~   81 (396)
T d2q7wa1           4 NITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE--TTKNYLGIDGIPEFGRCTQEL   81 (396)
T ss_dssp             TCCCCCC-----------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHC--CCCCCCCTTCCHHHHHHHHHH
T ss_pred             ccccCCCChHHHHHHHHhccCCCCcEEeeCCCccCCCCCCCCCHHHHHHHHHHhhCC--CCCCCCCCcCCHHHHHHHHHH
Confidence            34445555554454422   23567999999   45553 44589999999888776  366899999999999999999


Q ss_pred             HhhhhCCCCCC
Q psy782           86 YSSLIERPLLP   96 (100)
Q Consensus        86 ~~~~~g~~~~~   96 (100)
                      +.++++..+.+
T Consensus        82 ~~~~~~~~~~~   92 (396)
T d2q7wa1          82 LFGKGSALIND   92 (396)
T ss_dssp             HHCTTCHHHHT
T ss_pred             HHhhcCCcccc
Confidence            98876655443

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=99.07  E-value=1.1e-10  Score=79.95  Aligned_cols=79  Identities=18%  Similarity=0.085  Sum_probs=58.0

Q ss_pred             cchhHHHHHHHhh---cCCCceecCCCC---CCCC-CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhh
Q psy782           17 SVYSVWVEFIQLS---LDHKPLNLGQGF---PDYE-SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSL   89 (100)
Q Consensus        17 ~~~~~~~~~~~~~---~~~~~i~l~~G~---P~~~-~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~   89 (100)
                      .+++++..+.+..   .+++.|+||+|.   |+.. ++++.++++..+++.++  ..++|+++.|+++||++||+++.+.
T Consensus        10 ~p~d~i~~~~~~~~~d~~~~~InL~iG~~~d~~~~~~~~~~V~~a~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~   87 (401)
T d7aata_          10 GPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKK--MDKEYLPIAGLADFTRASAELALGE   87 (401)
T ss_dssp             CCCCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTT--CCCCCCCTTCCHHHHHHHHHHHHCT
T ss_pred             CCCChHHHHHHHHhCCCCCCcEEccCCCCcCCCCCCCCCHHHHHHHHHHhhCC--CCCCCCCCCCCHHHHHHHHHHHhcc
Confidence            3455555555432   235689999994   4442 33389999999888776  3568999999999999999999888


Q ss_pred             hCCCCCCC
Q psy782           90 IERPLLPH   97 (100)
Q Consensus        90 ~g~~~~~~   97 (100)
                      ++..+.++
T Consensus        88 ~~~~~~~~   95 (401)
T d7aata_          88 NSEAFKSG   95 (401)
T ss_dssp             TCHHHHTT
T ss_pred             CCcccCcC
Confidence            77665554

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.96  E-value=5.6e-10  Score=76.06  Aligned_cols=60  Identities=17%  Similarity=0.158  Sum_probs=48.4

Q ss_pred             CCceecCCCC---CCCC-CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCC
Q psy782           32 HKPLNLGQGF---PDYE-SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERP   93 (100)
Q Consensus        32 ~~~i~l~~G~---P~~~-~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~   93 (100)
                      ++.|+|++|.   ++.. ++++.+++++.+++.++  ..++|++..|+++||++|++++.+.++..
T Consensus        26 ~~~InL~iG~~~d~~g~~~~~~~V~~A~~~~~~~~--~~~~Y~p~~G~~~lr~aia~~~~~~~~~~   89 (394)
T d2ay1a_          26 QGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETE--TTKTYAGLSGEPEFQKAMGELILGDGLKS   89 (394)
T ss_dssp             TTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHC--CCCCCCCSSCCHHHHHHHHHHHHGGGCCG
T ss_pred             CCCEEccCCCccCCCCCCCCCHHHHHHHHHHhhCC--CCCCCCCCCCCHHHHHHHHHHHhcccccc
Confidence            4689999994   4443 44589999999988765  35689999999999999999998765543

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=98.93  E-value=1.5e-09  Score=74.54  Aligned_cols=83  Identities=18%  Similarity=0.143  Sum_probs=54.8

Q ss_pred             hcccchhHHHHHHH-hhc--CCCceecCCC---CCCCC-CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           14 FEASVYSVWVEFIQ-LSL--DHKPLNLGQG---FPDYE-SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        14 ~~~~~~~~~~~~~~-~~~--~~~~i~l~~G---~P~~~-~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      +....++.+..+.+ ..+  .++.|+|++|   +++.. +.++.++++......+. ...++|+|+.|+++||++|++++
T Consensus         9 ~~~~~~~~i~~l~~~~~~d~~~~~Inl~iG~~~d~~g~~~~~~~V~~a~~~~~~~~-~~~~~Y~p~~G~p~lreaia~~~   87 (412)
T d1ajsa_           9 VPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNS-SLNHEYLPILGLAEFRTCASRLA   87 (412)
T ss_dssp             CCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCT-TCCCCCCCTTCCHHHHHHHHHHH
T ss_pred             CCcCCCChHHHHHHHHhcCCCCCcEEeeCCCCcCCCCCCCCcHHHHHHHHHHHhCC-CcCCCCCCCCCCHHHHHHHHHHH
Confidence            44444444434443 333  2568999999   44442 23378888776655443 24578999999999999999999


Q ss_pred             hhhhCCCCCCC
Q psy782           87 SSLIERPLLPH   97 (100)
Q Consensus        87 ~~~~g~~~~~~   97 (100)
                      .+.++..+.++
T Consensus        88 ~~~~~~~~~~~   98 (412)
T d1ajsa_          88 LGDDSPALQEK   98 (412)
T ss_dssp             HCTTCHHHHTT
T ss_pred             hccCCcccccc
Confidence            88766544443

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=98.91  E-value=1e-09  Score=75.49  Aligned_cols=82  Identities=15%  Similarity=0.064  Sum_probs=56.5

Q ss_pred             hhhcccchhHHHHHHHh-hc--CCCceecCCC---CCCCC-CchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHH
Q psy782           12 PRFEASVYSVWVEFIQL-SL--DHKPLNLGQG---FPDYE-SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAK   84 (100)
Q Consensus        12 ~r~~~~~~~~~~~~~~~-~~--~~~~i~l~~G---~P~~~-~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~   84 (100)
                      .++....++.+..+.+. ..  .++.|+|++|   +|+.. ++++.++++...+..+ ....++|++..|+++||++|++
T Consensus         6 ~~~~~~~~d~i~~~~~~~~~d~~~~kInL~iG~~~d~~g~~~~~~~V~~A~~~l~~~-~~~~~~Y~p~~G~~~lr~aia~   84 (412)
T d1yaaa_           6 NNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHND-SSYNHEYLGITGLPSLTSNAAK   84 (412)
T ss_dssp             TTCCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTC-TTCCCCCCCTTCCHHHHHHHHH
T ss_pred             hcCCcCCCChHHHHHHHHhcCCCCCcEEeecCCCcCCCCCCCCcHHHHHHHHHHHhC-cccCCCCCCCCCCHHHHHHHHH
Confidence            44666666655555553 22  3468999999   46653 2338888876554433 3346789999999999999999


Q ss_pred             HHhhhhCCCC
Q psy782           85 LYSSLIERPL   94 (100)
Q Consensus        85 ~~~~~~g~~~   94 (100)
                      ++.+.++..+
T Consensus        85 ~~~~~~~~~~   94 (412)
T d1yaaa_          85 IIFGTQSDAL   94 (412)
T ss_dssp             HHHCTTCHHH
T ss_pred             HHhcccCccc
Confidence            9988765433

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=98.84  E-value=1.8e-09  Score=73.79  Aligned_cols=65  Identities=20%  Similarity=0.061  Sum_probs=49.1

Q ss_pred             CCCceecCCCC---CCCCCc--hHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCC
Q psy782           31 DHKPLNLGQGF---PDYESA--PSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPH   97 (100)
Q Consensus        31 ~~~~i~l~~G~---P~~~~p--p~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~   97 (100)
                      .++.|+|++|.   |+. .+  ++.+++|......+ ....++|+|+.|+++||++||+++.+.+|..++++
T Consensus        25 ~~~kInL~iG~~~d~~g-~~p~~~~V~~A~~~l~~~-~~~~~~Y~p~~G~~~lR~aia~~~~~~~~~~~~~~   94 (397)
T d3tata_          25 RSDKVNLSIGLYYNEDG-IIPQLQAVAEAEARLNAQ-PHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQ   94 (397)
T ss_dssp             CSSCEECSCCSCCCTTS-SCCCCHHHHHHHHHHTTS-CCSSBCCCCTTCCHHHHHHHHHHHTCSSCHHHHTT
T ss_pred             CCCcEEccCCCCcCCCC-CCCCcHHHHHHHHHHHhC-cccCCCCCCcccCHHHHHHHHHHHhhccCCcCCcC
Confidence            35679999994   554 33  38888887655433 33467899999999999999999998877766555

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=98.84  E-value=1.4e-09  Score=72.91  Aligned_cols=62  Identities=8%  Similarity=0.029  Sum_probs=50.1

Q ss_pred             CCCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy782           31 DHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV  100 (100)
Q Consensus        31 ~~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~eI  100 (100)
                      +.++|.|++|++.+ ++|+.+.+++.+.+...   .++|.|..|.++||++||+++.+. +  +++| +|
T Consensus        18 ~~d~~~l~~~enp~-~~p~~i~~~~~~~~~~~---~~~~yp~~g~~~Lr~aia~~~~~~-~--v~~d-~I   79 (334)
T d2f8ja1          18 KRDKTYLALNENPF-PFPEDLVDEVFRRLNSD---ALRIYYDSPDEELIEKILSYLDTD-F--LSKN-NV   79 (334)
T ss_dssp             CCCSEECSSCCCSS-CCCHHHHHHHHHHCCTT---GGGSCCCSSCHHHHHHHHHHHTCS-S--CCGG-GE
T ss_pred             CCCceEEECCCCCC-CCCHHHHHHHHHHhhcc---hhcCCCCCCcHHHHHHHHHHhccc-C--CCcc-eE
Confidence            35899999999888 88899999998888776   455557789999999999999765 4  4555 43

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=98.47  E-value=1e-07  Score=65.61  Aligned_cols=65  Identities=17%  Similarity=0.216  Sum_probs=46.7

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCC--------cccCCCCCCCCCHHHHHHHHHHHhhhhCC--CCCCCCCC
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGEN--------KLLNQYTRGFGHPRIVQAIAKLYSSLIER--PLLPHQLV  100 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~--------~~~~~Y~~~~G~~~LR~aia~~~~~~~g~--~~~~~~eI  100 (100)
                      ++|+|++|++..  ..+.+.+-+.+......        ....+|+++.|.++||++||+|+++.+|.  .++++ +|
T Consensus        37 G~i~l~~aen~l--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~~~~e-~I  111 (428)
T d1iaya_          37 GVIQMGLAENQL--CLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPE-RV  111 (428)
T ss_dssp             SBEECSSCCCCS--SHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTT-SC
T ss_pred             ceEEeecccCcc--chHHHHHHHHhCCchhhhHhHhhhCHHhccCcCCcchHHHHHHHHHHHHHHhCCCCCCChh-hE
Confidence            699999998654  55666665554221110        12357999999999999999999998874  45677 54

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=98.23  E-value=2.8e-07  Score=63.34  Aligned_cols=65  Identities=12%  Similarity=0.136  Sum_probs=45.5

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHh-----cC----CcccCCCCCCCCCHHHHHHHHHHHhhhhC--CCCCCCCCC
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAAT-----GE----NKLLNQYTRGFGHPRIVQAIAKLYSSLIE--RPLLPHQLV  100 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~-----~~----~~~~~~Y~~~~G~~~LR~aia~~~~~~~g--~~~~~~~eI  100 (100)
                      ++|+|++++...  .-+.+.+-+.+...     ..    ....++|+++.|.++||++||+++++.+|  +.++|+ +|
T Consensus        37 G~i~l~~~en~l--~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~~~pe-~I  112 (431)
T d1m7ya_          37 GIIQMGLAENQL--CFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPN-HL  112 (431)
T ss_dssp             SBEECSSCCCCS--CHHHHHHHHHHCCTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGG-GE
T ss_pred             cEEEeecccccc--cHHHHHHHHHhCCchhhhhhhhhhccHHhcCCcCCcCcHHHHHHHHHHHHHHhCCCCCCCcc-eE
Confidence            599999999876  34555555443111     00    01235799999999999999999998877  456776 54

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=98.05  E-value=3.1e-06  Score=56.35  Aligned_cols=48  Identities=19%  Similarity=0.279  Sum_probs=39.4

Q ss_pred             CceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           33 KPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        33 ~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      ++|+|+.|.+.+ .+|+.+.+++.+.+..    .++|+ ..|.++||++||+++
T Consensus        23 ~~idls~~~np~-~~p~~~~~a~~~~~~~----~~~Yp-~~~~~~Lr~aia~~~   70 (355)
T d1lc5a_          23 QLLDFSANINPL-GMPVSVKRALIDNLDC----IERYP-DADYFHLHQALARHH   70 (355)
T ss_dssp             GSEECSSCCCTT-CCCHHHHHHHHHTGGG----GGSCC-CTTCHHHHHHHHHHH
T ss_pred             heEEccCCCCCC-CCCHHHHHHHHHHHHH----hccCC-CCChHHHHHHHHHHh
Confidence            689999998778 7788889988886643    56794 557799999999987

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=94.14  E-value=0.017  Score=39.38  Aligned_cols=57  Identities=11%  Similarity=-0.084  Sum_probs=38.1

Q ss_pred             ceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCC--C--HHHHHHHHHHHhhhhC
Q psy782           34 PLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFG--H--PRIVQAIAKLYSSLIE   91 (100)
Q Consensus        34 ~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G--~--~~LR~aia~~~~~~~g   91 (100)
                      ++++..|+|.+ +.|-..+.+...+.-..+-.-+.|....+  .  ++|+++|++......+
T Consensus        58 ~~~~~~gdp~~-~~~~w~~~~~~~~~~~~~~~~~sy~~~~~~~~~~~~L~~~i~~lh~~~gn  118 (425)
T d2hoxa1          58 SADVASGDGLF-LEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGN  118 (425)
T ss_dssp             CEECCSCCCGG-GHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred             eeeCCCCCCCC-CCHHHHhCcccceEEeecccccceecCCccccCCHHHHHHHHHHHhhhCC
Confidence            79999999999 87766666655554322212234654433  2  8999999998876533

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=93.80  E-value=0.038  Score=34.08  Aligned_cols=36  Identities=11%  Similarity=0.124  Sum_probs=29.0

Q ss_pred             hHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           48 PSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        48 p~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      .+.+.+|+.++....   ..+|++..+..+||+.||+++
T Consensus        13 ~P~v~eAl~~~~~~~---~~~y~~~~~~~~lr~~ia~~~   48 (340)
T d1svva_          13 HPKILDLMARDNMTQ---HAGYGQDSHCAKAARLIGELL   48 (340)
T ss_dssp             CHHHHHHHHHHTTCC---CCSTTCSHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhhcC---CCCCCCCHHHHHHHHHHHHHh
Confidence            357889998877665   678988888888999999877

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=91.02  E-value=0.036  Score=36.03  Aligned_cols=43  Identities=12%  Similarity=0.101  Sum_probs=28.4

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHH
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY   86 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   86 (100)
                      .+.|.|+.++..+ .++..+       .++   ..+.|+.. +..+||++||+++
T Consensus        27 ~~~i~L~~ne~p~-~~~~~~-------~~~---~l~rYPd~-~~~~Lr~~ia~~~   69 (354)
T d1fg7a_          27 NGDVWLNANEYPT-AVEFQL-------TQQ---TLNRYPEC-QPKAVIENYAQYA   69 (354)
T ss_dssp             TCSEECSSCCCSS-CCCCCC-------CCC---CTTSCCCS-SCHHHHHHHHHHH
T ss_pred             CCCEEeeCCCCCC-CCCHHH-------HHH---HHhcCCCC-cHHHHHHHHHHHh
Confidence            3579999997545 333222       112   26789655 5689999999986

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=90.56  E-value=0.096  Score=32.60  Aligned_cols=51  Identities=10%  Similarity=0.206  Sum_probs=32.8

Q ss_pred             CCceecCCCCCCCCCchHHHHHHHHHHHhcCCcccCCCCCCCCCHHHHHHHHHHHh
Q psy782           32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS   87 (100)
Q Consensus        32 ~~~i~l~~G~P~~~~pp~~l~~a~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   87 (100)
                      ++..+|+.=++.. . .+++.+|+.++....   ..+|+......+||+.+|+++.
T Consensus         2 ~~~~~f~s~n~~g-~-~P~v~~A~~~a~~~~---~~~~~~~~~~~~l~~~la~~~g   52 (345)
T d1v72a1           2 PPALGFSSDNIAG-A-SPEVAQALVKHSSGQ---AGPYGTDELTAQVKRKFCEIFE   52 (345)
T ss_dssp             CCCCBCSCGGGCC-C-CHHHHHHHHHTTSSC---CCSTTCSHHHHHHHHHHHHHHT
T ss_pred             CCCcCcCCCCCCC-C-CHHHHHHHHHHhccC---ccccCCCHHHHHHHHHHHHHHC
Confidence            3456677544333 3 356888888765433   5667766677788888887764