Psyllid ID: psy7883

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------
MGKDGVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFGLDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHTEKVISQQILAAKVLPPWSRPSCPQARSIIRGRPSTLRYSARTQFVRSSQPARPKRDLDAKMTTVPPSYFTRWWLSRSKSDVENHLLSNSEDLDDYADVNTPIVFNGKPGSKISIVGSKVENSPV
ccccccccccccccccccccccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHccccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHcccHHHcccccccHHHHHHHHHHHHHccccHHHHHHHHccccHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHccccccccccccccccccccccHHHHHHHccccHHHHHHcccccccccccccccccEEEcccccccEEEEEcccccccc
ccccccEEEEEccEEEEEcccccccHHHHHHHHHccccccccEccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccHHHcccEcccccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHcccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccEEEEEEccEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHcEEccccccccccccccccHHHHHHHHHHHHHccccEEcccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccEccEcccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHcEEcHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHcccccHHHHHHHccHHHcccccccccccccccccEEcHHHHHHHHHHHHHHccccccccccccHHHHccccccEEEccccEEEEcccccccccccccccccccccHHHHHHHccccccHHHHHccccccHcccccccccEEEccccccEEEEEccEcccccc
mgkdgvriekdsfgelevpndkyygaqTVRSLinfpiggesermPEAIISAMGILKKAAAQVNKGFGLDSKIADTISKAADEVisgklyedhfplsiwqtgsgtqtnmNVNEVISNRAIEMlggklgskdpvhpndhvnkcqssndtfPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGrthtqdatpltlgqefsGYVTQIKYGIERVKDTLPRLYQLAiggtavgtglntyVGFAENCTQRISeltglpfksapnkFEALASHDALVEVSGALNTVAVSLMKIANdirflgsgprsglgelklpenepgssimpgkvnptQVEALTMVAAQVMGNHVAVtvggsnghfelnvfkpliVSNVLRSIRLLADTTesfttkcvtgilpnedtiaKHVNDSLMLVtalnphigydKAAEIAKHAYKTGITLKEAAVKLGYLTEQeydqwvkpekmlgpeyhpyfkpdnnetifHTEKVISQQILAakvlppwsrpscpqarsiirgrpstlrysartqfvrssqparpkrdldakmttvppsyftrwwlsrsksdvenhllsnsedlddyadvntpivfngkpgskisivgskvenspv
mgkdgvriekdsfgelevpndkyygaqTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFGLDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGrthtqdatpltlgqeFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHTEKVISQQILAAKvlppwsrpscpqarsiirgrpstlrysartqfvrssqparpkrdldakmttvppsyftrwWLSRSKSDVENHLLSnsedlddyaDVNTPivfngkpgskisivgskvenspv
MGKDGVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFGLDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHTEKVISQQILAAKVLPPWSRPSCPQARSIIRGRPSTLRYSARTQFVRSSQPARPKRDLDAKMTTVPPSYFTRWWLSRSKSDVENHLLSNSEDLDDYADVNTPIVFNGKPGSKISIVGSKVENSPV
*****************VPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFGLDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEML************************TFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLG******************************VEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHTEKVISQQILAAKVLPPWSR********************************************VPPSYFTRWWLSR****************DDYADVNTPIVFN*******************
****GVR*EKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFGLDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKML*****************HTEKVISQQILAAKVLPPWSRPSCPQARSIIRGRPSTLRYSA********************MTTVPPSYFTRWWLSRSKSDVENHLLSNSEDLDDYADVNTPIVFNGKPGSKISIVGSKV*****
MGKDGVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFGLDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHTEKVISQQILAAKVLPPWSRPSCPQARSIIRGRPSTLRYSART***************DAKMTTVPPSYFTRWWLSRSKSDVENHLLSNSEDLDDYADVNTPIVFNGKPGSKISIVGSKVENSPV
****GVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFGLDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHTEKVISQQILAAKVLPPWSRPSCPQARSIIRGRPSTLRYSARTQFVRS************KMTTVPPSYFTRWWLSRSKSDVEN*LLSNSEDLDDYADVNTPIVFNGKPGSKISIVGSKV*****
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MGKDGVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFGLDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHTEKVISQQILAAKVLPPWSRPSCPQARSIIRGRPSTLRYSARTQFVRSSQPARPKRDLDAKMTTVPPSYFTRWWLSRSKSDVENHLLSNSEDLDDYADVNTPIVFNGKPGSKISIVGSKVENSPV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query607 2.2.26 [Sep-21-2011]
Q7SX99509 Fumarate hydratase, mitoc yes N/A 0.762 0.909 0.758 0.0
Q60HF9510 Fumarate hydratase, mitoc N/A N/A 0.764 0.909 0.746 0.0
P07954510 Fumarate hydratase, mitoc yes N/A 0.764 0.909 0.746 0.0
P14408507 Fumarate hydratase, mitoc yes N/A 0.764 0.915 0.739 0.0
P10173466 Fumarate hydratase, mitoc yes N/A 0.764 0.995 0.748 0.0
P97807507 Fumarate hydratase, mitoc yes N/A 0.764 0.915 0.735 0.0
O17214501 Probable fumarate hydrata yes N/A 0.759 0.920 0.748 0.0
P55250494 Fumarate hydratase, mitoc N/A N/A 0.752 0.925 0.707 0.0
O94552520 Fumarate hydratase, mitoc yes N/A 0.761 0.888 0.672 0.0
Q9FI53499 Fumarate hydratase 2, chl yes N/A 0.754 0.917 0.682 0.0
>sp|Q7SX99|FUMH_DANRE Fumarate hydratase, mitochondrial OS=Danio rerio GN=fh PE=2 SV=1 Back     alignment and function desciption
 Score =  733 bits (1892), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/464 (75%), Positives = 400/464 (86%), Gaps = 1/464 (0%)

Query: 4   DGVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVN 63
           +  RIE+D+FGEL+VP+DKYYGAQTVRS +NF IGG +ERMP  +I A GILKKAAA+VN
Sbjct: 47  EAFRIERDTFGELKVPSDKYYGAQTVRSTMNFRIGGVTERMPIQVIRAFGILKKAAAEVN 106

Query: 64  KGFGLDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLG 123
           K +GLD KIAD I KAADEV SGKL +DHFPL +WQTGSGTQTNMNVNEVISNRAIEMLG
Sbjct: 107 KDYGLDPKIADAIMKAADEVESGKL-DDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMLG 165

Query: 124 GKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQ 183
           GKLGSKDPVHPNDHVNK QSSNDTFPTAMHIA A E+H  LL  LQ LHDAL  K+++F+
Sbjct: 166 GKLGSKDPVHPNDHVNKSQSSNDTFPTAMHIAAAKEVHEVLLPGLQTLHDALAAKAEQFK 225

Query: 184 NIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTY 243
           +IIKIGRTHTQDA PL+LGQEF GYV Q+KY I RVK +LPR+Y+LA GGTAVGTGLNT 
Sbjct: 226 DIIKIGRTHTQDAVPLSLGQEFGGYVQQVKYSIARVKASLPRVYELAAGGTAVGTGLNTR 285

Query: 244 VGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLG 303
           +GFAE    ++S LTGLPF +A NKFEALA+HDALVE+SGALNTVAVS+MKIANDIRFLG
Sbjct: 286 IGFAEKVADKVSALTGLPFVTAANKFEALAAHDALVELSGALNTVAVSMMKIANDIRFLG 345

Query: 304 SGPRSGLGELKLPENEPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELN 363
           SGPRSGLGEL LPENEPGSSIMPGKVNPTQ EA+TMVAAQVMGNHVAVTVGGSNGHFELN
Sbjct: 346 SGPRSGLGELILPENEPGSSIMPGKVNPTQCEAMTMVAAQVMGNHVAVTVGGSNGHFELN 405

Query: 364 VFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALNPHIGYD 423
           VFKP+I+ NVL S RLL D + SFT  CV GI  N + I K +++SLMLVTALNPHIGYD
Sbjct: 406 VFKPMIIKNVLNSARLLGDASVSFTNNCVVGIEANTERINKLMSESLMLVTALNPHIGYD 465

Query: 424 KAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPE 467
           KAA+IAK A+K G TLKEAA+KLG+L EQ++++WV+P  MLGP+
Sbjct: 466 KAAKIAKTAHKDGSTLKEAALKLGFLNEQQFEEWVRPHDMLGPK 509

Danio rerio (taxid: 7955)
EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: 2
>sp|Q60HF9|FUMH_MACFA Fumarate hydratase, mitochondrial OS=Macaca fascicularis GN=FH PE=2 SV=1 Back     alignment and function description
>sp|P07954|FUMH_HUMAN Fumarate hydratase, mitochondrial OS=Homo sapiens GN=FH PE=1 SV=3 Back     alignment and function description
>sp|P14408|FUMH_RAT Fumarate hydratase, mitochondrial OS=Rattus norvegicus GN=Fh PE=1 SV=1 Back     alignment and function description
>sp|P10173|FUMH_PIG Fumarate hydratase, mitochondrial OS=Sus scrofa GN=FH PE=1 SV=1 Back     alignment and function description
>sp|P97807|FUMH_MOUSE Fumarate hydratase, mitochondrial OS=Mus musculus GN=Fh PE=1 SV=3 Back     alignment and function description
>sp|O17214|FUMH_CAEEL Probable fumarate hydratase, mitochondrial OS=Caenorhabditis elegans GN=fum-1 PE=1 SV=1 Back     alignment and function description
>sp|P55250|FUMH_RHIOR Fumarate hydratase, mitochondrial OS=Rhizopus oryzae GN=FUMR PE=3 SV=1 Back     alignment and function description
>sp|O94552|FUMH_SCHPO Fumarate hydratase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fum1 PE=3 SV=3 Back     alignment and function description
>sp|Q9FI53|FUM2_ARATH Fumarate hydratase 2, chloroplastic OS=Arabidopsis thaliana GN=FUM2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query607
91084043497 PREDICTED: similar to AGAP001884-PA [Tri 0.759 0.927 0.785 0.0
321474099467 hypothetical protein DAPPUDRAFT_46417 [D 0.762 0.991 0.773 0.0
289743205495 fumarase [Glossina morsitans morsitans] 0.759 0.931 0.759 0.0
24640179467 lethal (1) G0255, isoform B [Drosophila 0.769 1.0 0.747 0.0
198470180496 GA22866 [Drosophila pseudoobscura pseudo 0.769 0.941 0.745 0.0
427789355502 Putative fumarase [Rhipicephalus pulchel 0.757 0.916 0.770 0.0
24640177495 lethal (1) G0255, isoform A [Drosophila 0.759 0.931 0.754 0.0
194764139498 GF21422 [Drosophila ananassae] gi|190619 0.759 0.925 0.750 0.0
332374940496 unknown [Dendroctonus ponderosae] 0.759 0.929 0.765 0.0
194896387495 GG19604 [Drosophila erecta] gi|190650118 0.759 0.931 0.752 0.0
>gi|91084043|ref|XP_967085.1| PREDICTED: similar to AGAP001884-PA [Tribolium castaneum] gi|270006696|gb|EFA03144.1| hypothetical protein TcasGA2_TC013056 [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  766 bits (1979), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/461 (78%), Positives = 413/461 (89%)

Query: 7   RIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGF 66
           RIEKD+FGEL+VP+DKYYGAQT+RS++NFPIGGE ERMP  +I+AMG+LKKAAA VNK +
Sbjct: 37  RIEKDTFGELKVPSDKYYGAQTLRSVMNFPIGGEFERMPYPVITAMGVLKKAAATVNKDY 96

Query: 67  GLDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKL 126
           GLD KI+D I KAADEVISGKLY DHFPL IWQTGSGTQTNMN NEVISNRAIE++GGKL
Sbjct: 97  GLDPKISDAICKAADEVISGKLYCDHFPLVIWQTGSGTQTNMNTNEVISNRAIEIMGGKL 156

Query: 127 GSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNII 186
           GSKDPVHPNDHVNK QSSNDTFPTAMHIAVA+EI N LL  L+ML ++LDKK+QEF++II
Sbjct: 157 GSKDPVHPNDHVNKSQSSNDTFPTAMHIAVAVEIQNTLLPGLKMLTNSLDKKAQEFKDII 216

Query: 187 KIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGF 246
           KIGRTHTQDA PLTLGQEFSGYV Q+K+GI+R+ DTLPRLY LA+GGTAVGTGLNT  GF
Sbjct: 217 KIGRTHTQDAVPLTLGQEFSGYVQQMKFGIDRINDTLPRLYMLALGGTAVGTGLNTRKGF 276

Query: 247 AENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGP 306
           AE C   IS+LTGLPF SAPNKFEALA+HDALVEVSGALN VA S+MKIANDIRFL SGP
Sbjct: 277 AEKCAAEISKLTGLPFTSAPNKFEALAAHDALVEVSGALNVVACSIMKIANDIRFLASGP 336

Query: 307 RSGLGELKLPENEPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFK 366
           R GLGEL LPENEPGSSIMPGKVNPTQ EA+TMVAAQVMGNHVAVT+GGSNGHFELNVFK
Sbjct: 337 RCGLGELSLPENEPGSSIMPGKVNPTQCEAITMVAAQVMGNHVAVTIGGSNGHFELNVFK 396

Query: 367 PLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALNPHIGYDKAA 426
           P++V+NVLRSIRLL D++++FTT CV GI+ N+D I K +++SLMLVTALNPHIGYDKAA
Sbjct: 397 PMMVANVLRSIRLLGDSSKAFTTNCVDGIVANKDRIDKLLHESLMLVTALNPHIGYDKAA 456

Query: 427 EIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPE 467
           +IAK A+K   TLKE A+KLG LTE+++ +WVKPE+MLGP+
Sbjct: 457 QIAKTAHKENSTLKETAIKLGILTEEQFKEWVKPEEMLGPK 497

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|321474099|gb|EFX85065.1| hypothetical protein DAPPUDRAFT_46417 [Daphnia pulex] Back     alignment and taxonomy information
>gi|289743205|gb|ADD20350.1| fumarase [Glossina morsitans morsitans] Back     alignment and taxonomy information
>gi|24640179|ref|NP_727108.1| lethal (1) G0255, isoform B [Drosophila melanogaster] gi|22831835|gb|AAN09177.1| lethal (1) G0255, isoform B [Drosophila melanogaster] gi|256000855|gb|ACU51768.1| LP02262p [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|198470180|ref|XP_002133384.1| GA22866 [Drosophila pseudoobscura pseudoobscura] gi|198145329|gb|EDY72012.1| GA22866 [Drosophila pseudoobscura pseudoobscura] Back     alignment and taxonomy information
>gi|427789355|gb|JAA60129.1| Putative fumarase [Rhipicephalus pulchellus] Back     alignment and taxonomy information
>gi|24640177|ref|NP_572339.1| lethal (1) G0255, isoform A [Drosophila melanogaster] gi|195340303|ref|XP_002036753.1| GM12511 [Drosophila sechellia] gi|22831834|gb|AAF46186.3| lethal (1) G0255, isoform A [Drosophila melanogaster] gi|194130869|gb|EDW52912.1| GM12511 [Drosophila sechellia] gi|329112611|gb|AEB72009.1| FI05334p [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|194764139|ref|XP_001964189.1| GF21422 [Drosophila ananassae] gi|190619114|gb|EDV34638.1| GF21422 [Drosophila ananassae] Back     alignment and taxonomy information
>gi|332374940|gb|AEE62611.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
>gi|194896387|ref|XP_001978469.1| GG19604 [Drosophila erecta] gi|190650118|gb|EDV47396.1| GG19604 [Drosophila erecta] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query607
FB|FBgn0028336495 l(1)G0255 "lethal (1) G0255" [ 0.759 0.931 0.754 5.4e-189
ZFIN|ZDB-GENE-010724-6509 fh "fumarate hydratase" [Danio 0.762 0.909 0.758 2.7e-187
UNIPROTKB|P07954510 FH "Fumarate hydratase, mitoch 0.764 0.909 0.746 1.9e-186
UNIPROTKB|Q5ZLD1507 FH "Uncharacterized protein" [ 0.764 0.915 0.750 6.4e-186
UNIPROTKB|P10173466 FH "Fumarate hydratase, mitoch 0.764 0.995 0.748 1e-185
UNIPROTKB|E2RGR9508 FH "Uncharacterized protein" [ 0.764 0.913 0.744 1.3e-185
UNIPROTKB|Q5M964507 Fh "Protein Fh1" [Rattus norve 0.764 0.915 0.741 2.2e-185
UNIPROTKB|Q148D3510 FH "Fumarate hydratase" [Bos t 0.764 0.909 0.739 4.5e-185
UNIPROTKB|I3LPP1466 FH "Fumarate hydratase, mitoch 0.762 0.993 0.748 4.5e-185
RGD|2614507 Fh "fumarate hydratase" [Rattu 0.764 0.915 0.739 5.8e-185
FB|FBgn0028336 l(1)G0255 "lethal (1) G0255" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1832 (650.0 bits), Expect = 5.4e-189, P = 5.4e-189
 Identities = 348/461 (75%), Positives = 404/461 (87%)

Query:     7 RIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGF 66
             R+E D+FGEL+VP DKYYGAQT+RS INFPIGG +ERMP+ ++ AMGILKKAAA+VNK F
Sbjct:    35 RVESDTFGELKVPADKYYGAQTMRSQINFPIGGATERMPKPVVQAMGILKKAAAEVNKEF 94

Query:    67 GLDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKL 126
             GLDSK+++ ISKAAD+VISGKLY+DHFPL IWQTGSGTQ+NMNVNEVISNRAIE+LGGKL
Sbjct:    95 GLDSKVSEAISKAADDVISGKLYDDHFPLVIWQTGSGTQSNMNVNEVISNRAIELLGGKL 154

Query:   127 GSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNII 186
             GSK PVHPNDHVNK QSSNDTFPTA+HI+VALE++N L  +++ LHDAL  KS+EF++II
Sbjct:   155 GSKTPVHPNDHVNKSQSSNDTFPTAIHISVALELNNNLKPAIKTLHDALRAKSEEFKDII 214

Query:   187 KIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGF 246
             KIGRTHT DA PLTLGQEFSGY  Q+ Y  ER+   LPR+Y+LA+GGTAVGTGLNT  GF
Sbjct:   215 KIGRTHTMDAVPLTLGQEFSGYAQQLAYAQERIDACLPRVYELALGGTAVGTGLNTRKGF 274

Query:   247 AENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGP 306
             AE C  +I+ELT LPF +APNKFEALA+ DA+VEV G LNT+AVSLMKIANDIRFLGSGP
Sbjct:   275 AEKCAAKIAELTSLPFVTAPNKFEALAARDAMVEVHGVLNTIAVSLMKIANDIRFLGSGP 334

Query:   307 RSGLGELKLPENEPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFK 366
             R GLGEL LPENEPGSSIMPGKVNPTQ E+LTM++AQVMGN VAVT+GGSNGHFELNVFK
Sbjct:   335 RCGLGELSLPENEPGSSIMPGKVNPTQCESLTMLSAQVMGNLVAVTIGGSNGHFELNVFK 394

Query:   367 PLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALNPHIGYDKAA 426
             PLIVSNVLRSIRLL+D + +FT  CV GI  N + IAK +N+SLMLVTALNPHIGYDKAA
Sbjct:   395 PLIVSNVLRSIRLLSDGSRTFTANCVNGIQANRENIAKIMNESLMLVTALNPHIGYDKAA 454

Query:   427 EIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPE 467
             +IAK A+K G TLKE A+ LGYLTEQ+++ WV+PE+MLGP+
Sbjct:   455 KIAKTAHKNGTTLKEEAINLGYLTEQQFNDWVRPEQMLGPK 495
GO:0005739 "mitochondrion" evidence=ISS;IDA
GO:0004333 "fumarate hydratase activity" evidence=ISS
GO:0006099 "tricarboxylic acid cycle" evidence=ISS
GO:0005737 "cytoplasm" evidence=ISS
GO:0045239 "tricarboxylic acid cycle enzyme complex" evidence=IEA
GO:0006106 "fumarate metabolic process" evidence=IEA
ZFIN|ZDB-GENE-010724-6 fh "fumarate hydratase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|P07954 FH "Fumarate hydratase, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZLD1 FH "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P10173 FH "Fumarate hydratase, mitochondrial" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2RGR9 FH "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q5M964 Fh "Protein Fh1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q148D3 FH "Fumarate hydratase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|I3LPP1 FH "Fumarate hydratase, mitochondrial" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|2614 Fh "fumarate hydratase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9ZCQ4FUMC_RICPR4, ., 2, ., 1, ., 20.64700.74950.9869yesN/A
Q8UEY7FUMC_AGRT54, ., 2, ., 1, ., 20.63200.75450.9892yesN/A
Q9I587FUMC2_PSEAE4, ., 2, ., 1, ., 20.58400.75780.9913yesN/A
Q92PB6FUMC_RHIME4, ., 2, ., 1, ., 20.63770.75280.9870yesN/A
Q8DIP7FUMC_THEEB4, ., 2, ., 1, ., 20.63470.75120.9764yesN/A
Q8FX90FUMC_BRUSU4, ., 2, ., 1, ., 20.62550.75450.9892yesN/A
Q8F9L0FUMC_LEPIN4, ., 2, ., 1, ., 20.65720.75280.9849yesN/A
P28894FUMC1_BRAJA4, ., 2, ., 1, ., 20.62150.75940.9746yesN/A
O17214FUMH_CAEEL4, ., 2, ., 1, ., 20.74890.75940.9201yesN/A
Q9FI53FUM2_ARATH4, ., 2, ., 1, ., 20.68260.75450.9178yesN/A
Q7W4N9FUMC_BORPA4, ., 2, ., 1, ., 20.60910.74790.9805yesN/A
P08417FUMH_YEAST4, ., 2, ., 1, ., 20.65150.75610.9405yesN/A
Q72VY3FUMC_LEPIC4, ., 2, ., 1, ., 20.65720.75280.9849yesN/A
Q82SM5FUMC_NITEU4, ., 2, ., 1, ., 20.60300.75280.9891yesN/A
Q4UMT4FUMC_RICFE4, ., 2, ., 1, ., 20.64560.75120.9891yesN/A
Q92GW0FUMC_RICCN4, ., 2, ., 1, ., 20.64270.74950.9827yesN/A
O25883FUMC_HELPY4, ., 2, ., 1, ., 20.57140.75450.9892yesN/A
Q983U5FUMC_RHILO4, ., 2, ., 1, ., 20.62030.75280.9827yesN/A
Q885V0FUMC_PSESM4, ., 2, ., 1, ., 20.58160.74950.9806yesN/A
P93033FUM1_ARATH4, ., 2, ., 1, ., 20.68910.75450.9308yesN/A
Q9ZJQ9FUMC_HELPJ4, ., 2, ., 1, ., 20.56920.75450.9892yesN/A
Q8ZPL7FUMC_SALTY4, ., 2, ., 1, ., 20.58350.75280.9785yesN/A
P97807FUMH_MOUSE4, ., 2, ., 1, ., 20.73540.76440.9151yesN/A
Q8XQE8FUMC_RALSO4, ., 2, ., 1, ., 20.59560.75120.9891yesN/A
Q1RHL6FUMC_RICBR4, ., 2, ., 1, ., 20.63930.74290.9740yesN/A
Q8KTE1FUMC_METEA4, ., 2, ., 1, ., 20.63990.75280.9682yesN/A
Q83CL8FUMC_COXBU4, ., 2, ., 1, ., 20.63550.75280.9956yesN/A
Q83ML8FUMC_SHIFL4, ., 2, ., 1, ., 20.58560.75280.9785yesN/A
Q68W74FUMC_RICTY4, ., 2, ., 1, ., 20.64480.74950.9869yesN/A
Q7W0A2FUMC_BORPE4, ., 2, ., 1, ., 20.61130.74790.9805yesN/A
Q8FHA7FUMC_ECOL64, ., 2, ., 1, ., 20.58780.75280.9785yesN/A
P55250FUMH_RHIOR4, ., 2, ., 1, ., 20.70740.75280.9251N/AN/A
Q8YB50FUMC_BRUME4, ., 2, ., 1, ., 20.62550.75450.9892yesN/A
P10173FUMH_PIG4, ., 2, ., 1, ., 20.74830.76440.9957yesN/A
Q7SX99FUMH_DANRE4, ., 2, ., 1, ., 20.75860.76270.9096yesN/A
O94552FUMH_SCHPO4, ., 2, ., 1, ., 20.67240.76110.8884yesN/A
Q7N4H8FUMC_PHOLL4, ., 2, ., 1, ., 20.57600.75120.9827yesN/A
P07954FUMH_HUMAN4, ., 2, ., 1, ., 20.74620.76440.9098yesN/A
Q9A6I5FUMC_CAUCR4, ., 2, ., 1, ., 20.65940.75280.9870yesN/A
Q7WG65FUMC_BORBR4, ., 2, ., 1, ., 20.60910.74790.9805yesN/A
Q54VA2FUMH_DICDI4, ., 2, ., 1, ., 20.68690.75450.9443yesN/A
Q60HF9FUMH_MACFA4, ., 2, ., 1, ., 20.74620.76440.9098N/AN/A
P14408FUMH_RAT4, ., 2, ., 1, ., 20.73970.76440.9151yesN/A
Q9CMK1FUMC_PASMU4, ., 2, ., 1, ., 20.59130.75280.9849yesN/A
P95331FUMC_MYXXD4, ., 2, ., 1, ., 20.59010.76110.9914yesN/A
Q8ZEB6FUMC_YERPE4, ., 2, ., 1, ., 20.58040.75120.9806yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer4.2.10.963
4th Layer4.2.1.20.946

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query607
PRK00485464 PRK00485, fumC, fumarate hydratase; Reviewed 0.0
cd01362455 cd01362, Fumarase_classII, Class II fumarases 0.0
COG0114462 COG0114, FumC, Fumarase [Energy production and con 0.0
cd01596450 cd01596, Aspartase_like, aspartase (L-aspartate am 0.0
PLN00134458 PLN00134, PLN00134, fumarate hydratase; Provisiona 0.0
TIGR00979458 TIGR00979, fumC_II, fumarate hydratase, class II 0.0
PRK12425464 PRK12425, PRK12425, fumarate hydratase; Provisiona 0.0
PRK12273472 PRK12273, aspA, aspartate ammonia-lyase; Provision 0.0
cd01357450 cd01357, Aspartase, Aspartase 0.0
PRK13353473 PRK13353, PRK13353, aspartate ammonia-lyase; Provi 0.0
COG1027471 COG1027, AspA, Aspartate ammonia-lyase [Amino acid 0.0
TIGR00839468 TIGR00839, aspA, aspartate ammonia-lyase 1e-161
PRK14515479 PRK14515, PRK14515, aspartate ammonia-lyase; Provi 1e-146
pfam00206312 pfam00206, Lyase_1, Lyase 1e-133
cd01334325 cd01334, Lyase_I, Lyase class I family; a group of 1e-121
cd01594231 cd01594, Lyase_I_like, Lyase class I_like superfam 2e-64
pfam1041555 pfam10415, FumaraseC_C, Fumarase C C-terminus 4e-30
cd01595381 cd01595, Adenylsuccinate_lyase_like, Adenylsuccina 5e-28
COG0015438 COG0015, PurB, Adenylosuccinate lyase [Nucleotide 8e-26
cd01597437 cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muco 1e-24
TIGR00928435 TIGR00928, purB, adenylosuccinate lyase 5e-21
PRK08540449 PRK08540, PRK08540, adenylosuccinate lyase; Review 5e-16
cd01360387 cd01360, Adenylsuccinate_lyase_1, Adenylsuccinate 9e-16
TIGR00838455 TIGR00838, argH, argininosuccinate lyase 2e-15
COG0165459 COG0165, ArgH, Argininosuccinate lyase [Amino acid 3e-15
PRK06390451 PRK06390, PRK06390, adenylosuccinate lyase; Provis 2e-14
cd01359435 cd01359, Argininosuccinate_lyase, Argininosuccinat 2e-13
PRK09053452 PRK09053, PRK09053, 3-carboxy-cis,cis-muconate cyc 3e-11
PLN02646474 PLN02646, PLN02646, argininosuccinate lyase 4e-11
TIGR02426338 TIGR02426, protocat_pcaB, 3-carboxy-cis,cis-mucona 8e-11
cd01598425 cd01598, PurB, PurB_like adenylosuccinases (adenyl 4e-10
cd03302436 cd03302, Adenylsuccinate_lyase_2, Adenylsuccinate 4e-09
PRK00855459 PRK00855, PRK00855, argininosuccinate lyase; Provi 5e-09
PRK07380431 PRK07380, PRK07380, adenylosuccinate lyase; Provis 3e-08
PRK12308614 PRK12308, PRK12308, bifunctional argininosuccinate 4e-08
PRK06705502 PRK06705, PRK06705, argininosuccinate lyase; Provi 6e-08
PRK04833455 PRK04833, PRK04833, argininosuccinate lyase; Provi 2e-07
PRK08470442 PRK08470, PRK08470, adenylosuccinate lyase; Provis 5e-07
PRK09285456 PRK09285, PRK09285, adenylosuccinate lyase; Provis 1e-06
PRK08937216 PRK08937, PRK08937, adenylosuccinate lyase; Provis 2e-06
PRK07492435 PRK07492, PRK07492, adenylosuccinate lyase; Provis 4e-06
PRK05975351 PRK05975, PRK05975, 3-carboxy-cis,cis-muconate cyc 2e-05
PRK06389434 PRK06389, PRK06389, argininosuccinate lyase; Provi 8e-05
PLN02848458 PLN02848, PLN02848, adenylosuccinate lyase 0.003
>gnl|CDD|234779 PRK00485, fumC, fumarate hydratase; Reviewed Back     alignment and domain information 
 Score =  923 bits (2388), Expect = 0.0
 Identities = 325/462 (70%), Positives = 376/462 (81%), Gaps = 4/462 (0%)

Query: 6   VRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKG 65
            RIEKDS GE+EVP D  +GAQT RSL NFPIGGE  RMP  +I A+ +LKKAAA+VN  
Sbjct: 4   TRIEKDSMGEVEVPADALWGAQTQRSLENFPIGGE--RMPRELIRALALLKKAAARVNAE 61

Query: 66  FG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGG 124
            G LD++ AD I  AADEVI+GK  +DHFPL +WQTGSGTQ+NMNVNEVI+NRA E+LGG
Sbjct: 62  LGLLDAEKADAIVAAADEVIAGKH-DDHFPLDVWQTGSGTQSNMNVNEVIANRASELLGG 120

Query: 125 KLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQN 184
           +LGSK PVHPNDHVN  QSSNDTFPTAMHIA  L I  RLL +L+ L D L  K++EF +
Sbjct: 121 ELGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAVLAIVERLLPALEHLRDTLAAKAEEFAD 180

Query: 185 IIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYV 244
           I+KIGRTH QDATPLTLGQEFSGY  Q+++GIER++  LP LY+LA+GGTAVGTGLN + 
Sbjct: 181 IVKIGRTHLQDATPLTLGQEFSGYAAQLEHGIERIEAALPHLYELALGGTAVGTGLNAHP 240

Query: 245 GFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGS 304
           GFAE   + ++ELTGLPF +APNKFEALA+HDALVE SGAL T+AVSLMKIANDIR+L S
Sbjct: 241 GFAERVAEELAELTGLPFVTAPNKFEALAAHDALVEASGALKTLAVSLMKIANDIRWLAS 300

Query: 305 GPRSGLGELKLPENEPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNV 364
           GPR GLGE+ LPENEPGSSIMPGKVNPTQ EALTMV AQVMGN  AVT  GS G+FELNV
Sbjct: 301 GPRCGLGEISLPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNDAAVTFAGSQGNFELNV 360

Query: 365 FKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALNPHIGYDK 424
           FKP+I  N L+SIRLLAD   SF   CV GI PN + I + +  SLMLVTALNPHIGYDK
Sbjct: 361 FKPVIAYNFLQSIRLLADAMRSFADHCVVGIEPNRERIKELLERSLMLVTALNPHIGYDK 420

Query: 425 AAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGP 466
           AA+IAK A+K G+TLKEAA++LGYLTE+E+D+WV PEKM GP
Sbjct: 421 AAKIAKKAHKEGLTLKEAALELGYLTEEEFDRWVDPEKMTGP 462

Length = 464
>gnl|CDD|176465 cd01362, Fumarase_classII, Class II fumarases Back     alignment and domain information
>gnl|CDD|223192 COG0114, FumC, Fumarase [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|176468 cd01596, Aspartase_like, aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes Back     alignment and domain information
>gnl|CDD|215069 PLN00134, PLN00134, fumarate hydratase; Provisional Back     alignment and domain information
>gnl|CDD|130052 TIGR00979, fumC_II, fumarate hydratase, class II Back     alignment and domain information
>gnl|CDD|171490 PRK12425, PRK12425, fumarate hydratase; Provisional Back     alignment and domain information
>gnl|CDD|237031 PRK12273, aspA, aspartate ammonia-lyase; Provisional Back     alignment and domain information
>gnl|CDD|176462 cd01357, Aspartase, Aspartase Back     alignment and domain information
>gnl|CDD|183992 PRK13353, PRK13353, aspartate ammonia-lyase; Provisional Back     alignment and domain information
>gnl|CDD|223958 COG1027, AspA, Aspartate ammonia-lyase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|213564 TIGR00839, aspA, aspartate ammonia-lyase Back     alignment and domain information
>gnl|CDD|237743 PRK14515, PRK14515, aspartate ammonia-lyase; Provisional Back     alignment and domain information
>gnl|CDD|215787 pfam00206, Lyase_1, Lyase Back     alignment and domain information
>gnl|CDD|176461 cd01334, Lyase_I, Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions Back     alignment and domain information
>gnl|CDD|176466 cd01594, Lyase_I_like, Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions Back     alignment and domain information
>gnl|CDD|204481 pfam10415, FumaraseC_C, Fumarase C C-terminus Back     alignment and domain information
>gnl|CDD|176467 cd01595, Adenylsuccinate_lyase_like, Adenylsuccinate lyase (ASL)_like Back     alignment and domain information
>gnl|CDD|223094 COG0015, PurB, Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|176469 cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like Back     alignment and domain information
>gnl|CDD|233192 TIGR00928, purB, adenylosuccinate lyase Back     alignment and domain information
>gnl|CDD|236283 PRK08540, PRK08540, adenylosuccinate lyase; Reviewed Back     alignment and domain information
>gnl|CDD|176464 cd01360, Adenylsuccinate_lyase_1, Adenylsuccinate lyase (ASL)_subgroup 1 Back     alignment and domain information
>gnl|CDD|129918 TIGR00838, argH, argininosuccinate lyase Back     alignment and domain information
>gnl|CDD|223243 COG0165, ArgH, Argininosuccinate lyase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|235792 PRK06390, PRK06390, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|176463 cd01359, Argininosuccinate_lyase, Argininosuccinate lyase (argininosuccinase, ASAL) Back     alignment and domain information
>gnl|CDD|181627 PRK09053, PRK09053, 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>gnl|CDD|215348 PLN02646, PLN02646, argininosuccinate lyase Back     alignment and domain information
>gnl|CDD|233863 TIGR02426, protocat_pcaB, 3-carboxy-cis,cis-muconate cycloisomerase Back     alignment and domain information
>gnl|CDD|176470 cd01598, PurB, PurB_like adenylosuccinases (adenylsuccinate lyase, ASL) Back     alignment and domain information
>gnl|CDD|176471 cd03302, Adenylsuccinate_lyase_2, Adenylsuccinate lyase (ASL)_subgroup 2 Back     alignment and domain information
>gnl|CDD|179143 PRK00855, PRK00855, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|180954 PRK07380, PRK07380, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|183425 PRK12308, PRK12308, bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional Back     alignment and domain information
>gnl|CDD|180664 PRK06705, PRK06705, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|179883 PRK04833, PRK04833, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|181437 PRK08470, PRK08470, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|236452 PRK09285, PRK09285, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|236352 PRK08937, PRK08937, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|181000 PRK07492, PRK07492, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|168324 PRK05975, PRK05975, 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>gnl|CDD|235791 PRK06389, PRK06389, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|178440 PLN02848, PLN02848, adenylosuccinate lyase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 607
PRK12425464 fumarate hydratase; Provisional 100.0
PRK14515479 aspartate ammonia-lyase; Provisional 100.0
TIGR00979458 fumC_II fumarate hydratase, class II. Putative fum 100.0
PLN00134458 fumarate hydratase; Provisional 100.0
COG0114462 FumC Fumarase [Energy production and conversion] 100.0
PRK00485464 fumC fumarate hydratase; Reviewed 100.0
PRK13353473 aspartate ammonia-lyase; Provisional 100.0
PRK12273472 aspA aspartate ammonia-lyase; Provisional 100.0
COG1027471 AspA Aspartate ammonia-lyase [Amino acid transport 100.0
TIGR00839468 aspA aspartate ammonia-lyase. Fumarate hydratase s 100.0
cd01357450 Aspartase Aspartase. This subgroup contains Escher 100.0
cd01362455 Fumarase_classII Class II fumarases. This subgroup 100.0
cd01596450 Aspartase_like aspartase (L-aspartate ammonia-lyas 100.0
KOG1317|consensus487 100.0
COG0165459 ArgH Argininosuccinate lyase [Amino acid transport 100.0
KOG1316|consensus464 100.0
PLN02646474 argininosuccinate lyase 100.0
PRK09053452 3-carboxy-cis,cis-muconate cycloisomerase; Provisi 100.0
PRK00855459 argininosuccinate lyase; Provisional 100.0
TIGR00838455 argH argininosuccinate lyase. This model describes 100.0
cd01597437 pCLME prokaryotic 3-carboxy-cis,cis-muconate cyclo 100.0
PRK08540449 adenylosuccinate lyase; Reviewed 100.0
TIGR00928435 purB adenylosuccinate lyase. This family consists 100.0
PRK04833455 argininosuccinate lyase; Provisional 100.0
PRK08470442 adenylosuccinate lyase; Provisional 100.0
PRK06705502 argininosuccinate lyase; Provisional 100.0
PRK07492435 adenylosuccinate lyase; Provisional 100.0
COG0015438 PurB Adenylosuccinate lyase [Nucleotide transport 100.0
PRK07380431 adenylosuccinate lyase; Provisional 100.0
PRK06390451 adenylosuccinate lyase; Provisional 100.0
cd01359435 Argininosuccinate_lyase Argininosuccinate lyase (a 100.0
cd03302436 Adenylsuccinate_lyase_2 Adenylsuccinate lyase (ASL 100.0
cd01360387 Adenylsuccinate_lyase_1 Adenylsuccinate lyase (ASL 100.0
cd01595381 Adenylsuccinate_lyase_like Adenylsuccinate lyase ( 100.0
PRK12308614 bifunctional argininosuccinate lyase/N-acetylgluta 100.0
PRK02186887 argininosuccinate lyase; Provisional 100.0
TIGR02426338 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisom 100.0
PRK06389434 argininosuccinate lyase; Provisional 100.0
PRK09285456 adenylosuccinate lyase; Provisional 100.0
cd01334325 Lyase_I Lyase class I family; a group of proteins 100.0
PRK05975351 3-carboxy-cis,cis-muconate cycloisomerase; Provisi 100.0
cd01598425 PurB PurB_like adenylosuccinases (adenylsuccinate 100.0
PLN02848458 adenylosuccinate lyase 100.0
PF00206312 Lyase_1: Lyase; InterPro: IPR022761 This entry rep 100.0
KOG2700|consensus481 100.0
cd01594231 Lyase_I_like Lyase class I_like superfamily: conta 100.0
PRK08937216 adenylosuccinate lyase; Provisional 99.96
PF1041555 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR0 98.68
PF1039781 ADSL_C: Adenylosuccinate lyase C-terminus; InterPr 97.93
PF1469870 ASL_C2: Argininosuccinate lyase C-terminal; PDB: 1 97.71
PF08328115 ASL_C: Adenylosuccinate lyase C-terminal; InterPro 93.47
KOG2700|consensus481 88.06
>PRK12425 fumarate hydratase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.6e-105  Score=877.49  Aligned_cols=460  Identities=59%  Similarity=0.954  Sum_probs=442.1

Q ss_pred             ccccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHH
Q psy7883           6 VRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVI   84 (607)
Q Consensus         6 ~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~   84 (607)
                      +|+|+|++|+++||.+.|||.+|+|++.||++||.  +.++++|+++..|++|||+||.+.| |+++++++|.++|++|.
T Consensus         2 ~r~e~d~~g~~~~p~~~~~g~~t~ra~~nf~~~~~--~~~~~~i~a~~~ik~Aha~~l~~~G~l~~~~~~~I~~al~ei~   79 (464)
T PRK12425          2 SRTETDSLGPIEVPEDAYWGAQTQRSLINFAIGKE--RMPLAVLHALALIKKAAARVNDRNGDLPADIARLIEQAADEVL   79 (464)
T ss_pred             CCcCcccCCCCCCcccccchHHHHHHHHcCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Confidence            79999999999999999999999999999999987  4779999999999999999999999 99999999999999998


Q ss_pred             cCccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHH
Q psy7883          85 SGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRL  164 (607)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L  164 (607)
                      ++.. +++|+++.++.+++||+|||+||||++++.+++|++.|++.+||||+|||+||||||+++|+++|++|+.+.+.|
T Consensus        80 ~~~~-~~~f~~~~~~~g~~ed~~mnvnevi~~~~~e~~G~~~g~~~~vhpn~~vh~g~S~ND~~~Ta~~L~~r~~l~~~l  158 (464)
T PRK12425         80 DGQH-DDQFPLVVWQTGSGTQSNMNVNEVIAGRANELAGNGRGGKSPVHPNDHVNRSQSSNDCFPTAMHIAAAQAVHEQL  158 (464)
T ss_pred             cCcc-cCCCCccCCCCCCcchHHHHHHHHHHHHHHHHhCcccccccccCchhcccCCCChhhHHHHHHHHHHHHHHHHHH
Confidence            8665 689999999998899999999999999999999987887778999999999999999999999999999874359


Q ss_pred             HHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCc
Q psy7883         165 LCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYV  244 (607)
Q Consensus       165 ~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~  244 (607)
                      .+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.+++++++.+|+||||+||++++++
T Consensus       159 ~~~L~~l~~~L~~~A~~~~~tim~GrTHlQ~A~PiT~G~~~~a~~~~l~rd~~RL~~~~~r~~~~plGggAvGT~~~~~~  238 (464)
T PRK12425        159 LPAIAELSGGLAEQSARHAKLVKTGRTHMMDATPITFGQELSAFVAQLDYAERAIRAALPAVCELAQGGTAVGTGLNAPH  238 (464)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCeeecccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhcCcccCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCCCCC
Q psy7883         245 GFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSI  324 (607)
Q Consensus       245 ~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~GSSi  324 (607)
                      +|++.+.+.|++.|||+.++.+|++|++++||+++++++++++++++|+|||+||++|+|+|++||||+.+|+.++||||
T Consensus       239 ~~~~~~~~~La~~LG~~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~llsS~p~~g~~ei~lp~~~~GSSi  318 (464)
T PRK12425        239 GFAEAIAAELAALSGLPFVTAPNKFAALAGHEPLVSLSGALKTLAVALMKIANDLRLLGSGPRAGLAEVRLPANEPGSSI  318 (464)
T ss_pred             cHHHHHHHHHHHHhCCCCcccccHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccCCceEEECCCCCCCCCC
Confidence            99999999999999999877899999999999999999999999999999999999999999999999999988999999


Q ss_pred             CCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHH
Q psy7883         325 MPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAK  404 (607)
Q Consensus       325 MPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~  404 (607)
                      |||||||+.+|.++++|+++.|++.+++....+++++.+.++|.+.+.++++++.+.++++.++..|+++|+||++||++
T Consensus       319 MPqK~NP~~~E~i~~~a~~v~G~~~~v~~~~~~~~~q~n~~~~~~~~~~l~s~~~l~~~~~~~~~~~i~~l~vn~erm~~  398 (464)
T PRK12425        319 MPGKVNPTQCEALSMLACQVMGNDATIGFAASQGHLQLNVFKPVIIHNLLQSIRLLADGCRNFQQHCVAGLEPDAEQMAA  398 (464)
T ss_pred             CCCCcCCHHHHHHHHHHHHHHhHHHHHHHHHhcCCchhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHH
Confidence            99999999999999999999999999988878889998888888888999999999999999999999999999999999


Q ss_pred             hhhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCC
Q psy7883         405 HVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEY  468 (607)
Q Consensus       405 ~l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~~  468 (607)
                      +++.+++++|+|++++||++||+++++|.++|++++|++.+.+.+++++++++|||.+|+|+..
T Consensus       399 ~l~~~~~~at~L~~~ig~~~A~~ia~~a~~~g~~l~e~~~~~~~l~~~el~~~ldP~~~~~~~~  462 (464)
T PRK12425        399 HLERGLMLVTALNPHIGYDKAAEIAKKAYAEGTTLREAALALGYLTDEQFDAWVRPENMLEAGG  462 (464)
T ss_pred             HHHcccHHHHHhhhccCHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHHcCHHHhcCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999764

>PRK14515 aspartate ammonia-lyase; Provisional Back     alignment and domain information
>TIGR00979 fumC_II fumarate hydratase, class II Back     alignment and domain information
>PLN00134 fumarate hydratase; Provisional Back     alignment and domain information
>COG0114 FumC Fumarase [Energy production and conversion] Back     alignment and domain information
>PRK00485 fumC fumarate hydratase; Reviewed Back     alignment and domain information
>PRK13353 aspartate ammonia-lyase; Provisional Back     alignment and domain information
>PRK12273 aspA aspartate ammonia-lyase; Provisional Back     alignment and domain information
>COG1027 AspA Aspartate ammonia-lyase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00839 aspA aspartate ammonia-lyase Back     alignment and domain information
>cd01357 Aspartase Aspartase Back     alignment and domain information
>cd01362 Fumarase_classII Class II fumarases Back     alignment and domain information
>cd01596 Aspartase_like aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes Back     alignment and domain information
>KOG1317|consensus Back     alignment and domain information
>COG0165 ArgH Argininosuccinate lyase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1316|consensus Back     alignment and domain information
>PLN02646 argininosuccinate lyase Back     alignment and domain information
>PRK09053 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>PRK00855 argininosuccinate lyase; Provisional Back     alignment and domain information
>TIGR00838 argH argininosuccinate lyase Back     alignment and domain information
>cd01597 pCLME prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like Back     alignment and domain information
>PRK08540 adenylosuccinate lyase; Reviewed Back     alignment and domain information
>TIGR00928 purB adenylosuccinate lyase Back     alignment and domain information
>PRK04833 argininosuccinate lyase; Provisional Back     alignment and domain information
>PRK08470 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PRK06705 argininosuccinate lyase; Provisional Back     alignment and domain information
>PRK07492 adenylosuccinate lyase; Provisional Back     alignment and domain information
>COG0015 PurB Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK07380 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PRK06390 adenylosuccinate lyase; Provisional Back     alignment and domain information
>cd01359 Argininosuccinate_lyase Argininosuccinate lyase (argininosuccinase, ASAL) Back     alignment and domain information
>cd03302 Adenylsuccinate_lyase_2 Adenylsuccinate lyase (ASL)_subgroup 2 Back     alignment and domain information
>cd01360 Adenylsuccinate_lyase_1 Adenylsuccinate lyase (ASL)_subgroup 1 Back     alignment and domain information
>cd01595 Adenylsuccinate_lyase_like Adenylsuccinate lyase (ASL)_like Back     alignment and domain information
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional Back     alignment and domain information
>PRK02186 argininosuccinate lyase; Provisional Back     alignment and domain information
>TIGR02426 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisomerase Back     alignment and domain information
>PRK06389 argininosuccinate lyase; Provisional Back     alignment and domain information
>PRK09285 adenylosuccinate lyase; Provisional Back     alignment and domain information
>cd01334 Lyase_I Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions Back     alignment and domain information
>PRK05975 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>cd01598 PurB PurB_like adenylosuccinases (adenylsuccinate lyase, ASL) Back     alignment and domain information
>PLN02848 adenylosuccinate lyase Back     alignment and domain information
>PF00206 Lyase_1: Lyase; InterPro: IPR022761 This entry represents the N-terminal region of lyase-1 family; PDB: 1DOF_C 1K62_B 1AOS_B 2VD6_D 2J91_B 1C3U_B 1C3C_A 3R6Y_C 3R6V_F 3R6Q_F Back     alignment and domain information
>KOG2700|consensus Back     alignment and domain information
>cd01594 Lyase_I_like Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions Back     alignment and domain information
>PRK08937 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle Back     alignment and domain information
>PF10397 ADSL_C: Adenylosuccinate lyase C-terminus; InterPro: IPR019468 Adenylosuccinate lyase catalyses two steps in the synthesis of purine nucleotides: the conversion of succinylaminoimidazole-carboxamide ribotide into aminoimidazole-carboxamide ribotide (the fifth step of de novo IMP biosynthesis); the formation of adenosine monophosphate (AMP) from adenylosuccinate (the final step in the synthesis of AMP from IMP) [] Back     alignment and domain information
>PF14698 ASL_C2: Argininosuccinate lyase C-terminal; PDB: 1XWO_A 2E9F_A 1TJW_C 1TJU_A 1DCN_B 1K7W_B 1HY1_C 1TJV_B 1AUW_A 1U15_B Back     alignment and domain information
>PF08328 ASL_C: Adenylosuccinate lyase C-terminal; InterPro: IPR013539 This domain is found at the C terminus of adenylosuccinate lyase(ASL; PurB in Escherichia coli) Back     alignment and domain information
>KOG2700|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query607
3e04_A490 Crystal Structure Of Human Fumarate Hydratase Lengt 0.0
1yfm_A488 Recombinant Yeast Fumarase Length = 488 1e-173
3gtd_A482 2.4 Angstrom Crystal Structure Of Fumarate Hydratas 1e-171
4hgv_A495 Crystal Structure Of A Fumarate Hydratase Length = 1e-164
3tv2_A459 Structure Of A Class Ii Fumarate Hydratase From Bur 1e-163
1fuo_A467 Fumarase C With Bound Citrate Length = 467 1e-156
1fup_A472 Fumarase With Bound Pyromellitic Acid Length = 472 1e-156
1kq7_A467 E315q Mutant Form Of Fumarase C From E.Coli Length 1e-156
1fur_A467 Fumarase Mutant H188n With Bound Substrate L-Malate 1e-155
2fus_A467 Mutations Of Fumarase That Distinguish Between The 1e-155
1vdk_A466 Crystal Structure Of Fumarase From Thermus Thermoph 1e-145
1j3u_A468 Crystal Structure Of Aspartase From Bacillus Sp. Ym 1e-117
3qbp_A478 Crystal Structure Of Fumarase Fum From Mycobacteriu 1e-116
3rd8_A489 Crystal Structure Of Fumarate Hydratase Class Ii My 1e-114
3no9_A475 Crystal Structure Of Apo Fumarate Hydratase From My 1e-112
4adl_A495 Crystal Structures Of Rv1098c In Complex With Malat 1e-112
4apa_A474 Crystal Structure Of Mycobacterium Tuberculosis Fum 1e-112
4apb_A474 Crystal Structure Of Mycobacterium Tuberculosis Fum 1e-112
3rrp_A471 Crystal Structure Of Fumarate Hydratase Fum From My 1e-110
3r6y_A401 Crystal Structure Of Chymotrypsin-Treated Aspartase 1e-99
3oce_A474 Crystal Structure Of Fumarate Lyase:delta Crystalli 2e-99
3ocf_A478 Crystal Structure Of Fumarate Lyase:delta Crystalli 2e-99
1jsw_A478 Native L-Aspartate Ammonia Lyase Length = 478 5e-94
2e9f_A462 Crystal Structure Of T.th.hb8 Argininosuccinate Lya 7e-11
4eei_A438 Crystal Structure Of Adenylosuccinate Lyase From Fr 9e-11
1f1o_A431 Structural Studies Of Adenylosuccinate Lyases Lengt 3e-10
1re5_A450 Crystal Structure Of 3-Carboxy-Cis,Cis-Muconate Lac 2e-09
1tj7_A457 Structure Determination And Refinement At 2.44 A Re 2e-09
1c3c_A429 T. Maritima Adenylosuccinate Lyase Length = 429 9e-08
1c3u_A431 T. Maritima Adenylosuccinate Lyase Length = 431 9e-08
1q5n_A454 Crystal Structure Of Beta-Carboxy-Cis,Cis-Muconate 2e-07
3bhg_A459 Crystal Structure Of Adenylosuccinate Lyase From Le 2e-07
2pfm_A444 Crystal Structure Of Adenylosuccinate Lyase (Purb) 2e-07
2x75_A431 Staphylococcus Aureus Adenylosuccinate Lyase Length 8e-07
3c8t_A451 Crystal Structure Of Fumarate Lyase From Mesorhizob 2e-06
1dof_A403 The Crystal Structure Of Adenylosuccinate Lyase Fro 3e-06
2qga_B465 Plasmodium Vivax Adenylosuccinate Lyase Pv003765 Wi 2e-05
4efc_A472 Crystal Structure Of Adenylosuccinate Lyase From Tr 5e-05
1i0a_A466 Crystal Structure Of Wild Type Turkey Delta 1 Cryst 7e-05
1hy1_A468 Crystal Structure Of Wild Type Duck Delta 2 Crystal 9e-05
1u15_A472 Crystal Structure Of A Duck-Delta-Crystallin-1 Doub 9e-05
1xwo_A465 Crystal Structrue Of Goose Delta Crystallin Length 1e-04
2hvg_A482 Crystal Structure Of Adenylosuccinate Lyase From Pl 1e-04
1k7w_A468 Crystal Structure Of S283a Duck Delta 2 Crystallin 2e-04
1tju_A474 Crystal Structure Of T161s Duck Delta 2 Crystallin 2e-04
4flc_A487 Structural And Biochemical Characterization Of Huma 3e-04
3gzh_A482 Crystal Structure Of Phosphate-Bound Adenylosuccina 4e-04
1hy0_A466 Crystal Structure Of Wild Type Duck Delta 1 Crystal 4e-04
1auw_A468 H91n Delta 2 Crystallin From Duck Length = 468 4e-04
1tjv_A474 Crystal Structure Of T161d Duck Delta 2 Crystallin 4e-04
4ffx_A487 Structural And Biochemical Characterization Of Huma 6e-04
2j91_A503 Crystal Structure Of Human Adenylosuccinate Lyase I 7e-04
2vd6_A503 Human Adenylosuccinate Lyase In Complex With Its Su 7e-04
>pdb|3E04|A Chain A, Crystal Structure Of Human Fumarate Hydratase Length = 490 Back     alignment and structure 
Iteration: 1

 Score =  719 bits (1855), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/465 (74%), Positives = 396/465 (85%), Gaps = 1/465 (0%)
Query: 3   KDGVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQV 62
           ++  RIE D+FGEL+VPNDKYYGAQTVRS +NF IGG +ERMP  +I A GILK+AAA+V
Sbjct: 27  QNSFRIEYDTFGELKVPNDKYYGAQTVRSTMNFKIGGVTERMPTPVIKAFGILKRAAAEV 86
Query: 63  NKGFGLDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEML 122
           N+ +GLD KIA+ I KAADEV  GKL  DHFPL +WQTGSGTQTNMNVNEVISNRAIEML
Sbjct: 87  NQDYGLDPKIANAIMKAADEVAEGKL-NDHFPLVVWQTGSGTQTNMNVNEVISNRAIEML 145
Query: 123 GGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEF 182
           GG+LGSK PVHPNDHVNK QSSNDTFPTAMHIA A+E+H  LL  LQ LHDALD KS+EF
Sbjct: 146 GGELGSKIPVHPNDHVNKSQSSNDTFPTAMHIAAAIEVHEVLLPGLQKLHDALDAKSKEF 205
Query: 183 QNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNT 242
             IIKIGRTHTQDA PLTLGQEFSGYV Q+KY + R+K  +PR+Y+LA GGTAVGTGLNT
Sbjct: 206 AQIIKIGRTHTQDAVPLTLGQEFSGYVQQVKYAMTRIKAAMPRIYELAAGGTAVGTGLNT 265
Query: 243 YVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFL 302
            +GFAE    +++ LTGLPF +APNKFEALA+HDALVE+SGA+NT A SLMKIANDIRFL
Sbjct: 266 RIGFAEKVAAKVAALTGLPFVTAPNKFEALAAHDALVELSGAMNTTACSLMKIANDIRFL 325
Query: 303 GSGPRSGLGELKLPENEPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFEL 362
           GSGPRSGLGEL LPENEPGSSIMPGKVNPTQ EA+TMVAAQVMGNHVAVTVGGSNGHFEL
Sbjct: 326 GSGPRSGLGELILPENEPGSSIMPGKVNPTQCEAMTMVAAQVMGNHVAVTVGGSNGHFEL 385
Query: 363 NVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALNPHIGY 422
           NVFKP+++ NVL S RLL D + SFT  CV GI  N + I K +N+SLMLVTALNPHIGY
Sbjct: 386 NVFKPMMIKNVLHSARLLGDASVSFTENCVVGIQANTERINKLMNESLMLVTALNPHIGY 445
Query: 423 DKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPE 467
           DKAA+IAK A+K G TLKE A++LGYLT +++D+WVKP+ MLGP+
Sbjct: 446 DKAAKIAKTAHKNGSTLKETAIELGYLTAEQFDEWVKPKDMLGPK 490
>pdb|1YFM|A Chain A, Recombinant Yeast Fumarase Length = 488 Back     alignment and structure
>pdb|3GTD|A Chain A, 2.4 Angstrom Crystal Structure Of Fumarate Hydratase From Rickettsia Prowazekii Length = 482 Back     alignment and structure
>pdb|4HGV|A Chain A, Crystal Structure Of A Fumarate Hydratase Length = 495 Back     alignment and structure
>pdb|3TV2|A Chain A, Structure Of A Class Ii Fumarate Hydratase From Burkholderia Pseudomallei Length = 459 Back     alignment and structure
>pdb|1FUO|A Chain A, Fumarase C With Bound Citrate Length = 467 Back     alignment and structure
>pdb|1FUP|A Chain A, Fumarase With Bound Pyromellitic Acid Length = 472 Back     alignment and structure
>pdb|1KQ7|A Chain A, E315q Mutant Form Of Fumarase C From E.Coli Length = 467 Back     alignment and structure
>pdb|1FUR|A Chain A, Fumarase Mutant H188n With Bound Substrate L-Malate At Putative Activator Site Length = 467 Back     alignment and structure
>pdb|2FUS|A Chain A, Mutations Of Fumarase That Distinguish Between The Active Site And A Nearby Dicarboxylic Acid Binding Site Length = 467 Back     alignment and structure
>pdb|1VDK|A Chain A, Crystal Structure Of Fumarase From Thermus Thermophilus Hb8 Length = 466 Back     alignment and structure
>pdb|1J3U|A Chain A, Crystal Structure Of Aspartase From Bacillus Sp. Ym55-1 Length = 468 Back     alignment and structure
>pdb|3QBP|A Chain A, Crystal Structure Of Fumarase Fum From Mycobacterium Marinum Length = 478 Back     alignment and structure
>pdb|3RD8|A Chain A, Crystal Structure Of Fumarate Hydratase Class Ii Mycobacterium Smegmatis Length = 489 Back     alignment and structure
>pdb|3NO9|A Chain A, Crystal Structure Of Apo Fumarate Hydratase From Mycobacterium Tuberculosis Length = 475 Back     alignment and structure
>pdb|4ADL|A Chain A, Crystal Structures Of Rv1098c In Complex With Malate Length = 495 Back     alignment and structure
>pdb|4APA|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Fumarase (Rv1098c) S318a In Apo Form Length = 474 Back     alignment and structure
>pdb|4APB|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Fumarase ( Rv1098c) S318c In Complex With Fumarate Length = 474 Back     alignment and structure
>pdb|3RRP|A Chain A, Crystal Structure Of Fumarate Hydratase Fum From Mycobacterium Abscessus With Malate Bound Length = 471 Back     alignment and structure
>pdb|3R6Y|A Chain A, Crystal Structure Of Chymotrypsin-Treated Aspartase From Bacillus Sp. Ym55-1 Length = 401 Back     alignment and structure
>pdb|3OCE|A Chain A, Crystal Structure Of Fumarate Lyase:delta Crystallin From Brucella Melitensis Bound To Cobalt Length = 474 Back     alignment and structure
>pdb|3OCF|A Chain A, Crystal Structure Of Fumarate Lyase:delta Crystallin From Brucella Melitensis In Native Form Length = 478 Back     alignment and structure
>pdb|1JSW|A Chain A, Native L-Aspartate Ammonia Lyase Length = 478 Back     alignment and structure
>pdb|2E9F|A Chain A, Crystal Structure Of T.th.hb8 Argininosuccinate Lyase Complexed With L-arginine Length = 462 Back     alignment and structure
>pdb|4EEI|A Chain A, Crystal Structure Of Adenylosuccinate Lyase From Francisella Tularensis Complexed With Amp And Succinate Length = 438 Back     alignment and structure
>pdb|1F1O|A Chain A, Structural Studies Of Adenylosuccinate Lyases Length = 431 Back     alignment and structure
>pdb|1RE5|A Chain A, Crystal Structure Of 3-Carboxy-Cis,Cis-Muconate Lactonizing Enzyme From Pseudomonas Putida Length = 450 Back     alignment and structure
>pdb|1TJ7|A Chain A, Structure Determination And Refinement At 2.44 A Resolution Of Argininosuccinate Lyase From E. Coli Length = 457 Back     alignment and structure
>pdb|1C3C|A Chain A, T. Maritima Adenylosuccinate Lyase Length = 429 Back     alignment and structure
>pdb|1C3U|A Chain A, T. Maritima Adenylosuccinate Lyase Length = 431 Back     alignment and structure
>pdb|1Q5N|A Chain A, Crystal Structure Of Beta-Carboxy-Cis,Cis-Muconate Cycloisomerase (Cmle) From Acinetobacter Calcoaceticus Sp. Adp1 Length = 454 Back     alignment and structure
>pdb|3BHG|A Chain A, Crystal Structure Of Adenylosuccinate Lyase From Legionella Pneumophila Length = 459 Back     alignment and structure
>pdb|2PFM|A Chain A, Crystal Structure Of Adenylosuccinate Lyase (Purb) From Bacillus Anthracis Length = 444 Back     alignment and structure
>pdb|2X75|A Chain A, Staphylococcus Aureus Adenylosuccinate Lyase Length = 431 Back     alignment and structure
>pdb|3C8T|A Chain A, Crystal Structure Of Fumarate Lyase From Mesorhizobium Sp. Bnc1 Length = 451 Back     alignment and structure
>pdb|1DOF|A Chain A, The Crystal Structure Of Adenylosuccinate Lyase From Pyrobaculum Aerophilum: Insights Into Thermal Stability And Human Pathology Length = 403 Back     alignment and structure
>pdb|2QGA|B Chain B, Plasmodium Vivax Adenylosuccinate Lyase Pv003765 With Amp Bound Length = 465 Back     alignment and structure
>pdb|4EFC|A Chain A, Crystal Structure Of Adenylosuccinate Lyase From Trypanosoma Brucei, Tb427tmp.160.5560 Length = 472 Back     alignment and structure
>pdb|1I0A|A Chain A, Crystal Structure Of Wild Type Turkey Delta 1 Crystallin (Eye Lens Protein) Length = 466 Back     alignment and structure
>pdb|1HY1|A Chain A, Crystal Structure Of Wild Type Duck Delta 2 Crystallin (Eye Lens Protein) Length = 468 Back     alignment and structure
>pdb|1U15|A Chain A, Crystal Structure Of A Duck-Delta-Crystallin-1 Double Loop Mutant (Dlm) Length = 472 Back     alignment and structure
>pdb|1XWO|A Chain A, Crystal Structrue Of Goose Delta Crystallin Length = 465 Back     alignment and structure
>pdb|2HVG|A Chain A, Crystal Structure Of Adenylosuccinate Lyase From Plasmodium Vivax Length = 482 Back     alignment and structure
>pdb|1K7W|A Chain A, Crystal Structure Of S283a Duck Delta 2 Crystallin Mutant Length = 468 Back     alignment and structure
>pdb|1TJU|A Chain A, Crystal Structure Of T161s Duck Delta 2 Crystallin Mutant Length = 474 Back     alignment and structure
>pdb|4FLC|A Chain A, Structural And Biochemical Characterization Of Human Adenylosuccinate Lyase (Adsl) And The R303c Adsl Deficiency Associated Mutation Length = 487 Back     alignment and structure
>pdb|3GZH|A Chain A, Crystal Structure Of Phosphate-Bound Adenylosuccinate Lyase From E. Coli Length = 482 Back     alignment and structure
>pdb|1HY0|A Chain A, Crystal Structure Of Wild Type Duck Delta 1 Crystallin (Eye Lens Protein) Length = 466 Back     alignment and structure
>pdb|1AUW|A Chain A, H91n Delta 2 Crystallin From Duck Length = 468 Back     alignment and structure
>pdb|1TJV|A Chain A, Crystal Structure Of T161d Duck Delta 2 Crystallin Mutant Length = 474 Back     alignment and structure
>pdb|4FFX|A Chain A, Structural And Biochemical Characterization Of Human Adenylosuccinate Lyase (Adsl) And The R303c Adsl Deficiency Associated Mutation Length = 487 Back     alignment and structure
>pdb|2J91|A Chain A, Crystal Structure Of Human Adenylosuccinate Lyase In Complex With Amp Length = 503 Back     alignment and structure
>pdb|2VD6|A Chain A, Human Adenylosuccinate Lyase In Complex With Its Substrate N6-(1,2-Dicarboxyethyl)-Amp, And Its Products Amp And Fumarate. Length = 503 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query607
3e04_A490 Fumarase, fumarate hydratase; TCA cycle, structura 0.0
1yfm_A488 Fumarase, YFUM; lyase, krebs cycle, active site wa 0.0
1fur_A467 Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, 0.0
1vdk_A466 Fumarase C, fumarate hydratase class II; TCA cycle 0.0
3gtd_A482 Fumarase C, fumarate hydratase class II; structura 0.0
4adm_A495 Fumarase C, fumarate hydratase class II; lyase, tr 0.0
3r6q_A468 Aspartase; aspartate ammonia lyase, lyase; 2.40A { 0.0
1jsw_A478 L-aspartase, L-aspartate ammonia-lyase; amino acid 0.0
3ocf_A478 Fumarate lyase:delta crystallin; fumarase, brucell 0.0
1q5n_A454 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, a 5e-30
3c8t_A451 Fumarate lyase; structural genomics, PSI-2, protei 1e-29
1re5_A450 3-carboxy-CIS,CIS-muconate cycloisomerase; homotet 2e-29
2pfm_A444 Adenylosuccinate lyase; PURB, purine biosynthesis, 3e-24
1c3c_A429 Protein (adenylosuccinate lyase); purine biosynthe 3e-23
2fel_A359 3-carboxy-CIS,CIS-muconate lactonizing enzyme; bio 1e-22
4eei_A438 Adenylosuccinate lyase; structural genomics, niaid 1e-20
1dof_A403 Adenylosuccinate lyase; purine biosynthesis; 2.10A 3e-20
1yis_A478 Adenylosuccinate lyase; structural genomics, PSI, 3e-15
2j91_A503 Adenylosuccinate lyase; disease mutation, adenylos 2e-14
2qga_B465 Adenylosuccinate lyase; malaria, PV003765, SGC, st 8e-14
3bhg_A459 Adenylosuccinate lyase; structural G PSI-2, protei 4e-13
2ptr_A462 Adenylosuccinate lyase; mutant-substrate complex; 9e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-09
1k7w_A468 Delta 2 crystallin; eye lens protein, argininosucc 2e-06
1tj7_A457 Argininosuccinate lyase; crystallin, E. coli, fuma 2e-06
2e9f_A462 Argininosuccinate lyase; alpha helix bundle; HET: 5e-06
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens} Length = 490 Back     alignment and structure
 Score =  964 bits (2494), Expect = 0.0
 Identities = 347/467 (74%), Positives = 396/467 (84%), Gaps = 1/467 (0%)

Query: 1   MGKDGVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAA 60
             ++  RIE D+FGEL+VPNDKYYGAQTVRS +NF IGG +ERMP  +I A GILK+AAA
Sbjct: 25  ASQNSFRIEYDTFGELKVPNDKYYGAQTVRSTMNFKIGGVTERMPTPVIKAFGILKRAAA 84

Query: 61  QVNKGFGLDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIE 120
           +VN+ +GLD KIA+ I KAADEV  GKL  DHFPL +WQTGSGTQTNMNVNEVISNRAIE
Sbjct: 85  EVNQDYGLDPKIANAIMKAADEVAEGKLN-DHFPLVVWQTGSGTQTNMNVNEVISNRAIE 143

Query: 121 MLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQ 180
           MLGG+LGSK PVHPNDHVNK QSSNDTFPTAMHIA A+E+H  LL  LQ LHDALD KS+
Sbjct: 144 MLGGELGSKIPVHPNDHVNKSQSSNDTFPTAMHIAAAIEVHEVLLPGLQKLHDALDAKSK 203

Query: 181 EFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGL 240
           EF  IIKIGRTHTQDA PLTLGQEFSGYV Q+KY + R+K  +PR+Y+LA GGTAVGTGL
Sbjct: 204 EFAQIIKIGRTHTQDAVPLTLGQEFSGYVQQVKYAMTRIKAAMPRIYELAAGGTAVGTGL 263

Query: 241 NTYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIR 300
           NT +GFAE    +++ LTGLPF +APNKFEALA+HDALVE+SGA+NT A SLMKIANDIR
Sbjct: 264 NTRIGFAEKVAAKVAALTGLPFVTAPNKFEALAAHDALVELSGAMNTTACSLMKIANDIR 323

Query: 301 FLGSGPRSGLGELKLPENEPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHF 360
           FLGSGPRSGLGEL LPENEPGSSIMPGKVNPTQ EA+TMVAAQVMGNHVAVTVGGSNGHF
Sbjct: 324 FLGSGPRSGLGELILPENEPGSSIMPGKVNPTQCEAMTMVAAQVMGNHVAVTVGGSNGHF 383

Query: 361 ELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALNPHI 420
           ELNVFKP+++ NVL S RLL D + SFT  CV GI  N + I K +N+SLMLVTALNPHI
Sbjct: 384 ELNVFKPMMIKNVLHSARLLGDASVSFTENCVVGIQANTERINKLMNESLMLVTALNPHI 443

Query: 421 GYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPE 467
           GYDKAA+IAK A+K G TLKE A++LGYLT +++D+WVKP+ MLGP+
Sbjct: 444 GYDKAAKIAKTAHKNGSTLKETAIELGYLTAEQFDEWVKPKDMLGPK 490
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1 Length = 488 Back     alignment and structure
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A Length = 467 Back     alignment and structure
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1 Length = 466 Back     alignment and structure
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii} Length = 482 Back     alignment and structure
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A Length = 495 Back     alignment and structure
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} PDB: 1j3u_A 3r6v_A 3r6y_A Length = 468 Back     alignment and structure
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1 Length = 478 Back     alignment and structure
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A Length = 478 Back     alignment and structure
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1 Length = 454 Back     alignment and structure
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP} Length = 451 Back     alignment and structure
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1 Length = 450 Back     alignment and structure
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A* Length = 444 Back     alignment and structure
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A Length = 429 Back     alignment and structure
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A Length = 359 Back     alignment and structure
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp} Length = 438 Back     alignment and structure
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1 Length = 403 Back     alignment and structure
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans} Length = 478 Back     alignment and structure
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A* Length = 503 Back     alignment and structure
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A Length = 465 Back     alignment and structure
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp} Length = 459 Back     alignment and structure
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A Length = 462 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A Length = 468 Back     alignment and structure
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1 Length = 457 Back     alignment and structure
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus} Length = 462 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query607
3gtd_A482 Fumarase C, fumarate hydratase class II; structura 100.0
3e04_A490 Fumarase, fumarate hydratase; TCA cycle, structura 100.0
3r6q_A468 Aspartase; aspartate ammonia lyase, lyase; 2.40A { 100.0
3ocf_A478 Fumarate lyase:delta crystallin; fumarase, brucell 100.0
4hgv_A495 Fumarase C, fumarate hydratase class II; nysgrc, P 100.0
1fur_A467 Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, 100.0
4adm_A495 Fumarase C, fumarate hydratase class II; lyase, tr 100.0
1yfm_A488 Fumarase, YFUM; lyase, krebs cycle, active site wa 100.0
1jsw_A478 L-aspartase, L-aspartate ammonia-lyase; amino acid 100.0
1vdk_A466 Fumarase C, fumarate hydratase class II; TCA cycle 100.0
1q5n_A454 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, a 100.0
1re5_A450 3-carboxy-CIS,CIS-muconate cycloisomerase; homotet 100.0
2e9f_A462 Argininosuccinate lyase; alpha helix bundle; HET: 100.0
3c8t_A451 Fumarate lyase; structural genomics, PSI-2, protei 100.0
1k7w_A468 Delta 2 crystallin; eye lens protein, argininosucc 100.0
1c3c_A429 Protein (adenylosuccinate lyase); purine biosynthe 100.0
2pfm_A444 Adenylosuccinate lyase; PURB, purine biosynthesis, 100.0
1tj7_A457 Argininosuccinate lyase; crystallin, E. coli, fuma 100.0
1dof_A403 Adenylosuccinate lyase; purine biosynthesis; 2.10A 100.0
4eei_A438 Adenylosuccinate lyase; structural genomics, niaid 100.0
2ptr_A462 Adenylosuccinate lyase; mutant-substrate complex; 100.0
2j91_A503 Adenylosuccinate lyase; disease mutation, adenylos 100.0
1yis_A478 Adenylosuccinate lyase; structural genomics, PSI, 100.0
2fel_A359 3-carboxy-CIS,CIS-muconate lactonizing enzyme; bio 100.0
3bhg_A459 Adenylosuccinate lyase; structural G PSI-2, protei 100.0
2qga_B465 Adenylosuccinate lyase; malaria, PV003765, SGC, st 100.0
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii} Back     alignment and structure
Probab=100.00  E-value=2.8e-110  Score=913.81  Aligned_cols=460  Identities=65%  Similarity=0.980  Sum_probs=442.9

Q ss_pred             CCCccccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHH
Q psy7883           3 KDGVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAAD   81 (607)
Q Consensus         3 ~~~~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~   81 (607)
                      |+++|+|+|++|+++||.|+|||.||+|+++||++|+..  .|+++|++++.||+|+|++|.++| ||++.+++|.++|+
T Consensus        22 ~~~~r~e~d~~g~~~vp~~~~~g~qt~Ra~~nf~i~~~~--~~~~~i~a~~~vk~AaA~an~~~G~l~~~~a~aI~~a~~   99 (482)
T 3gtd_A           22 MKNYRIESDSFGEIQIEEKFYWGAQTQRSLNNFKISKQK--MPKILIRALAILKKCAAQVNYEFGDLEYKIATSIDKAID   99 (482)
T ss_dssp             --CEEEEEETTEEEEEETTCCCCHHHHHHHHHCCCCSCB--CCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred             cccCcCccccCCCccCCcccccCHHHHHHHHhccccCCC--CCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence            567899999999999999999999999999999999974  789999999999999999999999 99999999999999


Q ss_pred             HHHcCccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHH
Q psy7883          82 EVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIH  161 (607)
Q Consensus        82 ~i~~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~  161 (607)
                      +|.+|++ +++|+++++|+|+|+++|||+||||++++++++|.+.|+|.+||||+|||+||||||+++|+++|++++++.
T Consensus       100 ev~~g~~-~~~fp~~~~q~gsGt~~Nmn~NevIa~ra~e~~G~~~g~~~~vHpndhVn~gqSsND~~~Ta~~l~~~~~~~  178 (482)
T 3gtd_A          100 RILAGEF-EDNFPLVVWQTGSGTQTNMNMNEVIASIANEELTGKKGGKFPVHPNDHVNKGQSSNDSFPTAMHIATVLATK  178 (482)
T ss_dssp             HHHHTTT-TTSCCCBSSSCTTCHHHHHHHHHHHHHHHHHHHHSCCCSSSSSCCCCCCTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHcCCc-ccCCCeehhccCCCccccchHHHHHHHHHHHHhCcccCCcCcCCccccCCCCCChhhHHHHHHHHHHHHHHH
Confidence            9999887 889999999999999999999999999999999988999988999999999999999999999999998876


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCC
Q psy7883         162 NRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLN  241 (607)
Q Consensus       162 ~~L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~  241 (607)
                      +.|.+.|..|+++|.++|++|+|++||||||+|+||||||||+|++|+++|.||++||.+++++++.+||||||+||+++
T Consensus       179 ~~L~~~L~~L~~~L~~kA~e~~d~v~~GrTHlQ~A~P~TlG~~~~~~~~~l~rd~~RL~~~~~~l~~~~lGgtAvGT~~~  258 (482)
T 3gtd_A          179 QQLIPALNNLLTYLQDKSKDWDKIIKIGRTHLQDATPLTLKQEFSGYITQIEYALERIEDALKKVYLLAQGGTAVGTGIN  258 (482)
T ss_dssp             HTHHHHHHHHHHHHHHHHTTGGGCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHTTTTEECTTCTTTSSCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCcEeeccccCccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCc
Confidence            56999999999999999999999999999999999999999999999999999999999999999999999998999999


Q ss_pred             CCcchhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCC
Q psy7883         242 TYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPG  321 (607)
Q Consensus       242 ~d~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~G  321 (607)
                      ++++|+.++.++++++|||+..+.+|++|++++||++++++++|+.++++|+|||+||++|+|+||+|||||.+|+.++|
T Consensus       259 ~~~~~~~~v~~~la~~lGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsSgpr~g~gEi~lp~~~~G  338 (482)
T 3gtd_A          259 SKIGFDIKFAQKVAEFTQQPFKTAPNKFESLAAHDALVEFSGTLNTIAVSLMKIANDIRLLGSGPRCGLGELHLPENEPG  338 (482)
T ss_dssp             SCTTHHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEECCCCSCC
T ss_pred             CCchhHHHHHHHHHHHhCCCCccccchhhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCeeEEECCCCCCC
Confidence            99999999999999999999877899999999999999999999999999999999999999999999999999998999


Q ss_pred             CCCCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHH
Q psy7883         322 SSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDT  401 (607)
Q Consensus       322 SSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~er  401 (607)
                      |||||||+||+.+|.++++|++++|+..++++++..+++|++.++|++.++++++++++.++++.++.+|++||+||++|
T Consensus       339 SSiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~g~~eln~~~pl~~~~~l~s~~ll~~~~~~~~~~~v~gl~vn~er  418 (482)
T 3gtd_A          339 SSIMPGKVNPTQVEALTMVCTQVMGNHVTVTIAGSNGHLELNVFKPVIIYNILQSIELLSDSVNSFVTHCVKGLEPNIAR  418 (482)
T ss_dssp             CSSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTCCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCEECHHH
T ss_pred             CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHH
Confidence            99999999999999999999999999999998889999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccC
Q psy7883         402 IAKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLG  465 (607)
Q Consensus       402 m~~~l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg  465 (607)
                      |+++++++++++|+|++++||+.|++++++|.++|++++|++.+.++||++||+++|||.+|+|
T Consensus       419 m~~~l~~s~~lvTaLa~~iGy~~a~~ia~~A~~~g~~l~e~~~~~~~ls~eeld~~ldP~~~~g  482 (482)
T 3gtd_A          419 INTLRDKSLMLVTVLNPHIGYDNAAKIAKEAHKYGITLKEAAKKLNFLSEEEFDKIVVPEKMIS  482 (482)
T ss_dssp             HHHHHHHCGGGHHHHHHHHCHHHHHHHHHHHHHHTCCHHHHHHHTTSCCHHHHHHHHSCC----
T ss_pred             HHHHHhhhhHHHHHhhhHHHHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHHHHHHHcCHHHhcC
Confidence            9999999999999999999999999999999999999999999999999999999999999987
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens} Back     alignment and structure
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} SCOP: a.127.1.1 PDB: 1j3u_A 3r6v_A 3r6y_A Back     alignment and structure
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A Back     alignment and structure
>4hgv_A Fumarase C, fumarate hydratase class II; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 2.09A {Sinorhizobium meliloti} Back     alignment and structure
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A Back     alignment and structure
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A Back     alignment and structure
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1 Back     alignment and structure
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1 Back     alignment and structure
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1 Back     alignment and structure
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1 Back     alignment and structure
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1 Back     alignment and structure
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus} Back     alignment and structure
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP} Back     alignment and structure
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A Back     alignment and structure
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A Back     alignment and structure
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A* Back     alignment and structure
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1 Back     alignment and structure
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1 Back     alignment and structure
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp} Back     alignment and structure
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A Back     alignment and structure
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A* Back     alignment and structure
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans} Back     alignment and structure
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A Back     alignment and structure
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp} Back     alignment and structure
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 607
d1yfma_459 a.127.1.1 (A:) Fumarase {Baker's yeast (Saccharomy 1e-178
d1fuoa_456 a.127.1.1 (A:) Fumarase {Escherichia coli [TaxId: 1e-170
d1vdka_460 a.127.1.1 (A:) Fumarase {Thermus thermophilus [Tax 1e-161
d1j3ua_462 a.127.1.1 (A:) L-aspartate ammonia lyase {Bacillus 1e-141
d1jswa_459 a.127.1.1 (A:) L-aspartate ammonia lyase {Escheric 1e-135
d1re5a_448 a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloiso 9e-52
d1q5na_444 a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloiso 5e-47
d1c3ca_429 a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga 1e-45
d1tj7a_455 a.127.1.1 (A:) Argininosuccinate lyase/delta-cryst 3e-39
d1dofa_402 a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Py 1e-37
d1k62b_459 a.127.1.1 (B:) Argininosuccinate lyase/delta-cryst 2e-36
d1tjva_449 a.127.1.1 (A:) Argininosuccinate lyase/delta-cryst 2e-32
>d1yfma_ a.127.1.1 (A:) Fumarase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 459 Back     information, alignment and structure

class: All alpha proteins
fold: L-aspartase-like
superfamily: L-aspartase-like
family: L-aspartase/fumarase
domain: Fumarase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  510 bits (1314), Expect = e-178
 Identities = 298/459 (64%), Positives = 359/459 (78%), Gaps = 3/459 (0%)

Query: 7   RIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGF 66
           R E D+FGE+ VP DKY+GAQT RS  NF IGG  ERMP  ++ A G+LKK+AA VN+  
Sbjct: 3   RTETDAFGEIHVPADKYWGAQTQRSFQNFKIGGARERMPLPLVHAFGVLKKSAAIVNESL 62

Query: 67  G-LDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGK 125
           G LD KI+  I +AADEV SGKL +DHFPL ++QTGSGTQ+NMN NEVISNRAIE+LGGK
Sbjct: 63  GGLDPKISKAIQQAADEVASGKL-DDHFPLVVFQTGSGTQSNMNANEVISNRAIEILGGK 121

Query: 126 LGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNI 185
           +GSK  VHPN+H N+ QSSNDTFPT MHIA +L+I N L+  L  L +AL+ KS+EF +I
Sbjct: 122 IGSKQ-VHPNNHCNQSQSSNDTFPTVMHIAASLQIQNELIPELTNLKNALEAKSKEFDHI 180

Query: 186 IKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVG 245
           +KIGRTH QDATPLTLGQEFSGYV Q++ GI+RV  +L  L  LA GGTAVGTGLNT  G
Sbjct: 181 VKIGRTHLQDATPLTLGQEFSGYVQQVENGIQRVAHSLKTLSFLAQGGTAVGTGLNTKPG 240

Query: 246 FAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSG 305
           F     ++IS+ TGL F++APN+FEALA+HDA+VE SGALNT+A SL KIA DIR+LGSG
Sbjct: 241 FDVKIAEQISKETGLKFQTAPNRFEALAAHDAIVECSGALNTLACSLFKIAQDIRYLGSG 300

Query: 306 PRSGLGELKLPENEPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVF 365
           PR G  EL LPENEPGSSIMPGKVNPTQ EALT V  QVMGN+ A+T  GS G FELNVF
Sbjct: 301 PRCGYHELMLPENEPGSSIMPGKVNPTQNEALTQVCVQVMGNNAAITFAGSQGQFELNVF 360

Query: 366 KPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALNPHIGYDKA 425
           KP++++N+L SIRL+ D   SF   CV GI  NE  I + +  SLMLVTALNP IGYD A
Sbjct: 361 KPVMIANLLNSIRLITDAAYSFRVHCVEGIKANEPRIHELLTKSLMLVTALNPKIGYDAA 420

Query: 426 AEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKML 464
           +++AK+A+K GITLKE+A++LG LTE+E+D+WV PE ML
Sbjct: 421 SKVAKNAHKKGITLKESALELGVLTEKEFDEWVVPEHML 459
>d1fuoa_ a.127.1.1 (A:) Fumarase {Escherichia coli [TaxId: 562]} Length = 456 Back     information, alignment and structure
>d1vdka_ a.127.1.1 (A:) Fumarase {Thermus thermophilus [TaxId: 274]} Length = 460 Back     information, alignment and structure
>d1j3ua_ a.127.1.1 (A:) L-aspartate ammonia lyase {Bacillus sp., ym55-1 [TaxId: 1409]} Length = 462 Back     information, alignment and structure
>d1jswa_ a.127.1.1 (A:) L-aspartate ammonia lyase {Escherichia coli [TaxId: 562]} Length = 459 Back     information, alignment and structure
>d1re5a_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Pseudomonas putida, strain KT2440 [TaxId: 303]} Length = 448 Back     information, alignment and structure
>d1q5na_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Acinetobacter calcoaceticus [TaxId: 471]} Length = 444 Back     information, alignment and structure
>d1c3ca_ a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga maritima [TaxId: 2336]} Length = 429 Back     information, alignment and structure
>d1tj7a_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Escherichia coli [TaxId: 562]} Length = 455 Back     information, alignment and structure
>d1dofa_ a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Length = 402 Back     information, alignment and structure
>d1k62b_ a.127.1.1 (B:) Argininosuccinate lyase/delta-crystallin {Human (Homo sapiens) [TaxId: 9606]} Length = 459 Back     information, alignment and structure
>d1tjva_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]} Length = 449 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query607
d1yfma_459 Fumarase {Baker's yeast (Saccharomyces cerevisiae) 100.0
d1vdka_460 Fumarase {Thermus thermophilus [TaxId: 274]} 100.0
d1jswa_459 L-aspartate ammonia lyase {Escherichia coli [TaxId 100.0
d1j3ua_462 L-aspartate ammonia lyase {Bacillus sp., ym55-1 [T 100.0
d1fuoa_456 Fumarase {Escherichia coli [TaxId: 562]} 100.0
d1tj7a_455 Argininosuccinate lyase/delta-crystallin {Escheric 100.0
d1k62b_459 Argininosuccinate lyase/delta-crystallin {Human (H 100.0
d1tjva_449 Argininosuccinate lyase/delta-crystallin {Domestic 100.0
d1re5a_448 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) { 100.0
d1q5na_444 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) { 100.0
d1f1oa_408 Adenylosuccinate lyase {Bacillus subtilis [TaxId: 100.0
d1c3ca_429 Adenylosuccinate lyase {Thermotoga maritima [TaxId 100.0
d1dofa_402 Adenylosuccinate lyase {Archaeon Pyrobaculum aerop 100.0
>d1yfma_ a.127.1.1 (A:) Fumarase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: All alpha proteins
fold: L-aspartase-like
superfamily: L-aspartase-like
family: L-aspartase/fumarase
domain: Fumarase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=9.7e-104  Score=860.70  Aligned_cols=458  Identities=65%  Similarity=0.999  Sum_probs=434.7

Q ss_pred             CccccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHH
Q psy7883           5 GVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEV   83 (607)
Q Consensus         5 ~~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i   83 (607)
                      .+|+|+|++|+++||.|+|||.||+|++.||++||...+.|..+|+++..||+|+|++|.++| ||++.+++|.++|++|
T Consensus         1 ~~r~e~d~~g~~~vp~~~~~G~~T~ra~~nf~i~~~~~~~~~~~i~a~~~vk~A~A~an~~lG~l~~~~a~aI~~a~~ei   80 (459)
T d1yfma_           1 SFRTETDAFGEIHVPADKYWGAQTQRSFQNFKIGGARERMPLPLVHAFGVLKKSAAIVNESLGGLDPKISKAIQQAADEV   80 (459)
T ss_dssp             CEEEECSSSCCEEEESSCCCCHHHHHHHTTCCTTGGGGBCCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred             CCCCcccCCCCccCCcccchhHHHHHHHHCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence            379999999999999999999999999999999986556789999999999999999999999 9999999999999999


Q ss_pred             HcCccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHH
Q psy7883          84 ISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNR  163 (607)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~  163 (607)
                      .+|++ +++|+++++++++++++|||+||||.+++.+.+|...|.+ .||||+|||+|+||||+++||++|+++.++.+.
T Consensus        81 ~~g~~-~~~f~~~~~q~g~gt~~nmn~nevia~~a~~~~~~~~~~~-~vhp~d~v~~gqSsnD~~~Ta~~l~~~~~~~~~  158 (459)
T d1yfma_          81 ASGKL-DDHFPLVVFQTGSGTQSNMNANEVISNRAIEILGGKIGSK-QVHPNNHCNQSQSSNDTFPTVMHIAASLQIQNE  158 (459)
T ss_dssp             HHTSS-GGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHC----------CCCCCCCTTTCCHHHHHHHHHHHHHHHHHHTT
T ss_pred             HcCCc-cccccchHHhhccccccccchhhhhHHHHHHHhhcccccc-ccCcchhhhhccchHhhhhhHHHHHHHHHHHHH
Confidence            99887 7899999999999999999999999999999888778877 499999999999999999999999998887667


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCC
Q psy7883         164 LLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTY  243 (607)
Q Consensus       164 L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d  243 (607)
                      |.+.|..|+++|.++|++|++|+||||||+|+||||||||||++|+++|.||++||.+++++++.+||||||+||+.+..
T Consensus       159 L~~~L~~L~~~L~~kA~e~~~~im~GRTHlQ~A~PiT~G~~~~~~~~~l~r~~~RL~~~~~~l~~~~lGgta~gtg~~a~  238 (459)
T d1yfma_         159 LIPELTNLKNALEAKSKEFDHIVKIGRTHLQDATPLTLGQEFSGYVQQVENGIQRVAHSLKTLSFLAQGGTAVGTGLNTK  238 (459)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTEECTTCTTTSSCTTSC
T ss_pred             HHHHHHHHHHHHHHHHHhccCeeehhHhhCCcCCCeeHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccchhhccccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999889999999


Q ss_pred             cchhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCCCC
Q psy7883         244 VGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSS  323 (607)
Q Consensus       244 ~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~GSS  323 (607)
                      +++...+.+.+++.|||...+.+|+++|+++||++++++++|++++++|+|||+||++|+|+|+.||+|+.+|+.++|||
T Consensus       239 ~~~~~~v~~~l~~~lgl~~~~~~n~~~a~~~rD~~~e~~~~L~~la~~L~Kia~Dlrll~s~~~~g~~El~~~~~~~GSS  318 (459)
T d1yfma_         239 PGFDVKIAEQISKETGLKFQTAPNRFEALAAHDAIVECSGALNTLACSLFKIAQDIRYLGSGPRCGYHELMLPENEPGSS  318 (459)
T ss_dssp             TTHHHHHHHHHHHHHSSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEECCCCSCCCT
T ss_pred             CcchHHHHHHHHHHcCCCCcccCchHHHHcCChhHHHHHHHHHHHHHHHHHHHHHHHHhccceeeeEEeeecccccccCc
Confidence            99999999999999999988899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHH
Q psy7883         324 IMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIA  403 (607)
Q Consensus       324 iMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~  403 (607)
                      |||||+||+.+|.++++|+++.|+..++++....+++|+|.+.+.+.+.++++++++.+++..++..|++||+||++||+
T Consensus       319 iMP~K~NPv~~E~v~~~~~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~~l~s~~~l~~~~~~~~~~~i~gl~vn~erm~  398 (459)
T d1yfma_         319 IMPGKVNPTQNEALTQVCVQVMGNNAAITFAGSQGQFELNVFKPVMIANLLNSIRLITDAAYSFRVHCVEGIKANEPRIH  398 (459)
T ss_dssp             TSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCBTTBCSCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHH
T ss_pred             ccccccChhhHHHHHHHHHHhccHhhHHHHHHhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCEECHHHHH
Confidence            99999999999999999999999999998888888999999999999999999999999999999999999999999999


Q ss_pred             HhhhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCccccc
Q psy7883         404 KHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKML  464 (607)
Q Consensus       404 ~~l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~v  464 (607)
                      ++++++.+++|+|++++||+.||++|++|.++|++|+|++.+.+.||++||+++|||++|+
T Consensus       399 ~~l~~s~~l~taL~~~iGy~~A~~ia~~a~~~g~~lre~~~~~~~Ls~~eld~lldP~~~l  459 (459)
T d1yfma_         399 ELLTKSLMLVTALNPKIGYDAASKVAKNAHKKGITLKESALELGVLTEKEFDEWVVPEHML  459 (459)
T ss_dssp             HHHHHCSGGGTTTGGGTCHHHHHHHHHHHHHHTCCHHHHHHHTTSCCHHHHHHHCCGGGCC
T ss_pred             HHHHhCccHHHHhcchhhHHHHHHHHHHHHHhCCCHHHHHHHhCCCCHHHHHHHcCHHHhC
Confidence            9999999999999999999999999999999999999999999999999999999999986
>d1vdka_ a.127.1.1 (A:) Fumarase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1jswa_ a.127.1.1 (A:) L-aspartate ammonia lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1j3ua_ a.127.1.1 (A:) L-aspartate ammonia lyase {Bacillus sp., ym55-1 [TaxId: 1409]} Back     information, alignment and structure
>d1fuoa_ a.127.1.1 (A:) Fumarase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tj7a_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1k62b_ a.127.1.1 (B:) Argininosuccinate lyase/delta-crystallin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tjva_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]} Back     information, alignment and structure
>d1re5a_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Pseudomonas putida, strain KT2440 [TaxId: 303]} Back     information, alignment and structure
>d1q5na_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Acinetobacter calcoaceticus [TaxId: 471]} Back     information, alignment and structure
>d1f1oa_ a.127.1.1 (A:) Adenylosuccinate lyase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1c3ca_ a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1dofa_ a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure