Psyllid ID: psy8040

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270--
Protein Sequence
MDPNNVKDIPMEVDDFQSSGLSAQFSAELDRVALAIAIRGLEEEMGSHITFELHLRDQSATNYCLSDYSQYPVVFFLSHRYKSSSGGCGVSSSRCTASGVELRELRRHNYKSCVFPNKTSASYQDHRHHRTRSGRGMSMGQKISNGVKTVNRESSAPFKPVIPRELAHQRPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQIIRFQ
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccHHHHHHHHHHHcHHHHHcccEEEEEEEcccccccccccccccccEEEEEEcEEEccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccEEEEEccEEEEEccccccccccccccccccccccHHHHccccccccccccccccccccccccEEEcccccEEEEEccccccccccccccccccccEEEEEEEcccccccEEEEEEEcccccccccccEEcccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccccccccccccccccccEEEEEcccccccccccccccccEEcccccHHHHHHHccEEEEcccccccccccccccccccccccccccEEcccEEEccccccHHHHHHHHccccHHccHHHHHHHccccccHHHHHHHccccccccccEEEEccccEEEEEccccEcccccccccccccccEEEEEEEccccccEEEEEEEEccccccccccEEEEEcc
Coil and Loop (DISEMBL)
mdpnnvkdipmevddfqssglsaqfSAELDRVALAIAIRGLeeemgshitfelhlrdqsatnyclsdysqypVVFFLSHryksssggcgvsssrctasGVELRELRrhnykscvfpnktsasyqdhrhhrtrsgrgmsmgqkisngvktvnressapfkpviprelahqrpgrldiildmppasretqvkhawnpedrslnifvkdddkltfhrhpvaqstdcirgrvgfTKGFHIWEVHWSarqrgthavvgvgtidaplhsvgYQIIRFQ
Flexible Loop (DISEMBL)
mdpnnvkdipmevDDFQSSGLSAQFSAELDRVALAIAIRGLEEEMGSHITFELHLRDQSATNYCLSDYSQYPVVFFLSHRYKsssggcgvsssrcTASGVELRELRRHNYKScvfpnktsasyqdhrhhrtrsgrgmsmgqKISNgvktvnressapfkpviprelahqrpgRLDIILDMPPASRETQVkhawnpedrslnIFVKDDDKLTfhrhpvaqstdcirgRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIdaplhsvgYQIIRFQ
Low Complexity Region (SEG)
MDPNNVKDIPMEVDDFQSSGLSAQFSAELDRVALAIAIRGLEEEMGSHITFELHLRDQSATNYCLSDYSQYPVVFFLSHRYKsssggcgvsssRCTASGVELRELRRHNYKSCVFPNKTSASYQDHRHHRTRSGRGMSMGQKISNGVKTVNRESSAPFKPVIPRELAHQRPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQIIRFQ
Disordered region (IsUnstruct)
************************FSAELDRVALAIAIRGLEEEMGSHITFELHLRDQSATNYCLSDYSQYPVVFFLSHRYKSSSGGCGV***RCTASGVELRELRRHNYKSCVF************************************************************IIL**************W****RSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQIIR**
Disordered Region (DISOPRED)
*****VK*IPMEVDDFQSSGLSAQFSAELDRVALAIAIRGLEEEMGSHITFELHLRDQSATNYCLSDYSQYPVVFFLSH********************************SCVFP************************************************************ILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQIIRFQ
Disordered Region (DISEMBL)
MDPNNVKDIPMEVDDFQSSGLSAQFSAELDRVALAIAIRGLEEEMGSHITFELHLRDQSATNYCLSDYSQYPVVFFLSHRY****************SGVELRELRRHNYKSCVFPNKT*****************MSMGQKISNGVKTVNRESSAPFKPVIPRELAHQRPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQIIRFQ
Disordered Region (DISPRO)
****NVKDIPMEVDDFQSSGLSAQFSAELDRVALAIAIRGLEEEMGSHITFELHLRDQSATNYCLSDYSQYPVVFFLSHR****************ASGVELRELRRHNYKSCVFPN**********************GQKISNGVKTVNRESSAPFKPVIPRELAHQRPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQIIRFQ
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDPNNVKDIPMEVDDFQSSGLSAQFSAELDRVALAIAIRGLEEEMGSHITFELHLRDQSATNYCLSDYSQYPVVFFLSHRYKSSSGGCGVSSSRCTASGVELRELRRHNYKSCVFPNKTSASYQDHRHHRTRSGRGMSMGQKISNGVKTVNRESSAPFKPVIPRELAHQRPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQIIRFQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	272	2.2.26 [Sep-21-2011]
Q9D5L7	273	SPRY domain-containing SO	yes	N/A	0.477	0.476	0.593	4e-43
Q96BD6	273	SPRY domain-containing SO	yes	N/A	0.477	0.476	0.593	5e-43
Q5E9X6	273	SPRY domain-containing SO	yes	N/A	0.477	0.476	0.593	5e-43
Q8R5B6	273	SPRY domain-containing SO	no	N/A	0.477	0.476	0.631	2e-42
Q96A44	273	SPRY domain-containing SO	no	N/A	0.474	0.472	0.619	2e-41
Q5M877	264	SPRY domain-containing SO	no	N/A	0.360	0.371	0.494	1e-20
Q99619	263	SPRY domain-containing SO	no	N/A	0.360	0.372	0.494	2e-20
O88838	264	SPRY domain-containing SO	no	N/A	0.360	0.371	0.494	2e-20
Q8K3B1	286	F-box/SPRY domain-contain	no	N/A	0.408	0.388	0.373	2e-14
P0C2W1	286	F-box/SPRY domain-contain	no	N/A	0.408	0.388	0.373	2e-14

>sp|Q9D5L7|SPSB1_MOUSE SPRY domain-containing SOCS box protein 1 OS=Mus musculus GN=Spsb1 PE=1 SV=1

 Score =  174 bits (442), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 79/133 (59%), Positives = 102/133 (76%), Gaps = 3/133 (2%)

Query: 139 MGQKISNGVKTVNRESSA--PFKPVIPRELAHQRPGRLDIILDMPPASRETQVKHAWNPE 196
           MGQK++ G+KTV+       P K  + + L + +P RLD++LDMPP S + Q+ H+WN  
Sbjct: 1   MGQKVTGGIKTVDMRDPTYRPLKQEL-QGLDYCKPTRLDLLLDMPPVSYDVQLLHSWNNN 59

Query: 197 DRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGT 256
           DRSLN+FVK+DDKL FHRHPVAQSTD IRG+VG+T+G H+W++ W+ RQRGTHAVVGV T
Sbjct: 60  DRSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVAT 119

Query: 257 IDAPLHSVGYQII 269
            DAPLHSVGY  +
Sbjct: 120 ADAPLHSVGYTTL 132

Probable substrate recognition component of a SCF-like ECS (Elongin BC-CUL2/5-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
Mus musculus (taxid: 10090)

>sp|Q96BD6|SPSB1_HUMAN SPRY domain-containing SOCS box protein 1 OS=Homo sapiens GN=SPSB1 PE=1 SV=1

 Score =  174 bits (442), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 79/133 (59%), Positives = 102/133 (76%), Gaps = 3/133 (2%)

Query: 139 MGQKISNGVKTVNRESSA--PFKPVIPRELAHQRPGRLDIILDMPPASRETQVKHAWNPE 196
           MGQK++ G+KTV+       P K  + + L + +P RLD++LDMPP S + Q+ H+WN  
Sbjct: 1   MGQKVTGGIKTVDMRDPTYRPLKQEL-QGLDYCKPTRLDLLLDMPPVSYDVQLLHSWNNN 59

Query: 197 DRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGT 256
           DRSLN+FVK+DDKL FHRHPVAQSTD IRG+VG+T+G H+W++ W+ RQRGTHAVVGV T
Sbjct: 60  DRSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVAT 119

Query: 257 IDAPLHSVGYQII 269
            DAPLHSVGY  +
Sbjct: 120 ADAPLHSVGYTTL 132

Probable substrate recognition component of a SCF-like ECS (Elongin BC-CUL2/5-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Homo sapiens (taxid: 9606)

>sp|Q5E9X6|SPSB1_BOVIN SPRY domain-containing SOCS box protein 1 OS=Bos taurus GN=SPSB1 PE=2 SV=1

 Score =  174 bits (442), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 79/133 (59%), Positives = 102/133 (76%), Gaps = 3/133 (2%)

Query: 139 MGQKISNGVKTVNRESSA--PFKPVIPRELAHQRPGRLDIILDMPPASRETQVKHAWNPE 196
           MGQK++ G+KTV+       P K  + + L + +P RLD++LDMPP S + Q+ H+WN  
Sbjct: 1   MGQKVTGGIKTVDMRDPTYRPLKQEL-QGLDYCKPTRLDLLLDMPPVSYDVQLLHSWNNN 59

Query: 197 DRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGT 256
           DRSLN+FVK+DDKL FHRHPVAQSTD IRG+VG+T+G H+W++ W+ RQRGTHAVVGV T
Sbjct: 60  DRSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVAT 119

Query: 257 IDAPLHSVGYQII 269
            DAPLHSVGY  +
Sbjct: 120 ADAPLHSVGYTTL 132

Probable substrate recognition component of a SCF-like ECS (Elongin BC-CUL2/5-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Bos taurus (taxid: 9913)

>sp|Q8R5B6|SPSB4_MOUSE SPRY domain-containing SOCS box protein 4 OS=Mus musculus GN=Spsb4 PE=1 SV=1

 Score =  172 bits (436), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 84/133 (63%), Positives = 98/133 (73%), Gaps = 3/133 (2%)

Query: 139 MGQKISNGVKTVNRESSA--PFKPVIPRELAHQRPGRLDIILDMPPASRETQVKHAWNPE 196
           MGQK+S  +K+V     A  P K  + R L   RP RLD +LDMP A    Q++HAWNPE
Sbjct: 1   MGQKLSGSLKSVEVREPALRPAKREL-RGLEPGRPARLDQLLDMPAAGLAVQLRHAWNPE 59

Query: 197 DRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGT 256
           DRSLN+FVKDDD+LTFHRHPVAQSTD IRG+VG  +G H W++HW ARQRGTHAVVGV T
Sbjct: 60  DRSLNVFVKDDDRLTFHRHPVAQSTDGIRGKVGHARGLHAWQIHWPARQRGTHAVVGVAT 119

Query: 257 IDAPLHSVGYQII 269
             APLHSVGY  +
Sbjct: 120 ARAPLHSVGYTAL 132

Probable substrate recognition component of a SCF-like ECS (Elongin BC-CUL2/5-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Mus musculus (taxid: 10090)

>sp|Q96A44|SPSB4_HUMAN SPRY domain-containing SOCS box protein 4 OS=Homo sapiens GN=SPSB4 PE=1 SV=1

 Score =  169 bits (427), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 83/134 (61%), Positives = 98/134 (73%), Gaps = 5/134 (3%)

Query: 139 MGQKISNGVKTVNRESSAPFKPVIPRELAHQRPGR---LDIILDMPPASRETQVKHAWNP 195
           MGQK+S  +K+V     A  +P   REL    PGR   LD +LDMP A    Q++HAWNP
Sbjct: 1   MGQKLSGSLKSVEVREPA-LRPA-KRELRGAEPGRPARLDQLLDMPAAGLAVQLRHAWNP 58

Query: 196 EDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVG 255
           EDRSLN+FVKDDD+LTFHRHPVAQSTD IRG+VG  +G H W+++W ARQRGTHAVVGV 
Sbjct: 59  EDRSLNVFVKDDDRLTFHRHPVAQSTDGIRGKVGHARGLHAWQINWPARQRGTHAVVGVA 118

Query: 256 TIDAPLHSVGYQII 269
           T  APLHSVGY  +
Sbjct: 119 TARAPLHSVGYTAL 132

Probable substrate recognition component of a SCF-like ECS (Elongin BC-CUL2/5-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Homo sapiens (taxid: 9606)

>sp|Q5M877|SPSB2_RAT SPRY domain-containing SOCS box protein 2 OS=Rattus norvegicus GN=Spsb2 PE=2 SV=1

 Score =  100 bits (248), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/99 (49%), Positives = 61/99 (61%), Gaps = 1/99 (1%)

Query: 171 PGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGF 230
           P  L+ +L  PP     Q  H WNP+D S NI VK+   L F R PVAQSTD +RG+ G+
Sbjct: 26  PEGLEELLSAPPPDLGAQRHHGWNPKDCSENIDVKEGG-LCFERRPVAQSTDGVRGKRGY 84

Query: 231 TKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQII 269
           ++G H WE+ W   QRGTHAVVGV T  APL +  Y  +
Sbjct: 85  SRGLHAWEISWPLEQRGTHAVVGVATALAPLQADHYAAL 123

Probable substrate recognition component of a SCF-like ECS (Elongin BC-CUL2/5-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Rattus norvegicus (taxid: 10116)

>sp|Q99619|SPSB2_HUMAN SPRY domain-containing SOCS box protein 2 OS=Homo sapiens GN=SPSB2 PE=1 SV=1

 Score = 99.8 bits (247), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 49/99 (49%), Positives = 61/99 (61%), Gaps = 1/99 (1%)

Query: 171 PGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGF 230
           P  L+ +L  PP     Q +H WNP+D S NI VK+   L F R PVAQSTD  RG+ G+
Sbjct: 26  PEGLEELLSAPPPDLGAQRRHGWNPKDCSENIEVKEGG-LYFERRPVAQSTDGARGKRGY 84

Query: 231 TKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQII 269
           ++G H WE+ W   QRGTHAVVGV T  APL +  Y  +
Sbjct: 85  SRGLHAWEISWPLEQRGTHAVVGVATALAPLQTDHYAAL 123

Probable substrate recognition component of a SCF-like ECS (Elongin BC-CUL2/5-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Homo sapiens (taxid: 9606)

>sp|O88838|SPSB2_MOUSE SPRY domain-containing SOCS box protein 2 OS=Mus musculus GN=Spsb2 PE=1 SV=1

 Score = 99.8 bits (247), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 49/99 (49%), Positives = 61/99 (61%), Gaps = 1/99 (1%)

Query: 171 PGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGF 230
           P  L+ +L  PP     Q  H WNP+D S NI VK+   L F R PVAQSTD +RG+ G+
Sbjct: 26  PEGLEELLSAPPPDLVAQRHHGWNPKDCSENIDVKEGG-LCFERRPVAQSTDGVRGKRGY 84

Query: 231 TKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQII 269
           ++G H WE+ W   QRGTHAVVGV T  APL +  Y  +
Sbjct: 85  SRGLHAWEISWPLEQRGTHAVVGVATALAPLQADHYAAL 123

Probable substrate recognition component of a SCF-like ECS (Elongin BC-CUL2/5-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Mus musculus (taxid: 10090)

>sp|Q8K3B1|FBSP1_MOUSE F-box/SPRY domain-containing protein 1 OS=Mus musculus GN=Fbxo45 PE=1 SV=2

 Score = 80.1 bits (196), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 69/115 (60%), Gaps = 4/115 (3%)

Query: 153 ESSAPFKPVIPRELAHQRPGRLDIILDMPPASRETQV-KHAWNPEDRSLNIFVKDDDKLT 211
           E+S  ++ +  R LA +   R DI+ ++P    + +  +HA++  D S N+++K +   T
Sbjct: 74  ENSEVWRSLCARSLAEEAL-RTDILCNLPSYKAKVRAFQHAFSTNDCSRNVYIKKNG-FT 131

Query: 212 FHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGY 266
            HR+P+AQSTD  R ++GF++G H WEV W     GT AV+G+ T  AP+   GY
Sbjct: 132 LHRNPIAQSTDGARTKIGFSEGRHAWEVWWEG-PLGTVAVIGIATKRAPMQCQGY 185

Component of E3 ubiquitin ligase complexes. Required for normal neuromuscular synaptogenesis, axon pathfinding and neuronal migration. Plays a role in the regulation of neurotransmission at mature neurons (By similarity). May controls synaptic activity by controlling UNC13A via ubiquitin dependent pathway. Specifically recognizes TP73, promoting its ubiquitination and degradation.

Mus musculus (taxid: 10090)

>sp|P0C2W1|FBSP1_HUMAN F-box/SPRY domain-containing protein 1 OS=Homo sapiens GN=FBXO45 PE=1 SV=1

 Score = 79.7 bits (195), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 69/115 (60%), Gaps = 4/115 (3%)

Query: 153 ESSAPFKPVIPRELAHQRPGRLDIILDMPPASRETQV-KHAWNPEDRSLNIFVKDDDKLT 211
           E+S  ++ +  R LA +   R DI+ ++P    + +  +HA++  D S N+++K +   T
Sbjct: 74  ENSEVWRSLCARSLAEEAL-RTDILCNLPSYKAKIRAFQHAFSTNDCSRNVYIKKNG-FT 131

Query: 212 FHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGY 266
            HR+P+AQSTD  R ++GF++G H WEV W     GT AV+G+ T  AP+   GY
Sbjct: 132 LHRNPIAQSTDGARTKIGFSEGRHAWEVWWEG-PLGTVAVIGIATKRAPMQCQGY 185

Component of E3 ubiquitin ligase complexes. Required for normal neuromuscular synaptogenesis, axon pathfinding and neuronal migration (By similarity). Plays a role in the regulation of neurotransmission at mature neurons (By similarity). May controls synaptic activity by controlling UNC13A via ubiquitin dependent pathway (By similarity). Specifically recognizes TP73, promoting its ubiquitination and degradation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	272
328717959	411	PREDICTED: SPRY domain-containing SOCS b	0.647	0.428	0.700	1e-68
242020565	280	SPRY domain-containing SOCS box protein,	0.481	0.467	0.849	1e-61
270011657	362	hypothetical protein TcasGA2_TC005709 [T	0.566	0.425	0.696	4e-58
195387433	349	GJ21895 [Drosophila virilis] gi|19414885	0.514	0.401	0.741	5e-58
195053237	349	GH13013 [Drosophila grimshawi] gi|193900	0.602	0.469	0.640	6e-58
195119167	349	GI18267 [Drosophila mojavensis] gi|19391	0.514	0.401	0.741	1e-57
195434162	349	GK14868 [Drosophila willistoni] gi|19416	0.514	0.401	0.748	1e-57
195175553	349	GL15433 [Drosophila persimilis] gi|19846	0.514	0.401	0.748	2e-57
289740615	344	SOCS box protein ssB-1 [Glossina morsita	0.606	0.479	0.640	3e-57
195355755	349	GM26734 [Drosophila sechellia] gi|195565	0.602	0.469	0.646	3e-57

>gi|328717959|ref|XP_003246347.1| PREDICTED: SPRY domain-containing SOCS box protein 1-like [Acyrthosiphon pisum]

 Score =  265 bits (678), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 131/187 (70%), Positives = 149/187 (79%), Gaps = 11/187 (5%)

Query: 92  SSRCTASGVELRELRRHNYKSCV----FPNKTSA-----SYQDHRHHRTRSGRGMSMGQK 142
           SSR T+SGVELRELRRHNYK+ V      NK +A     S       RTR+ R M+MGQK
Sbjct: 78  SSRVTSSGVELRELRRHNYKASVSVLSHLNKGNAASPYVSIGGGHRQRTRAHRAMNMGQK 137

Query: 143 ISNGVKTVNRESSAPFKPVIPRELAHQ--RPGRLDIILDMPPASRETQVKHAWNPEDRSL 200
           IS+GVKTV+RES+ P+KPV+PRELA    RP RLDI+LDMPPAS+E Q+KH WN EDRSL
Sbjct: 138 ISSGVKTVSRESAQPYKPVVPRELAQDFARPARLDILLDMPPASKEMQIKHGWNAEDRSL 197

Query: 201 NIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAP 260
           NIFVK++DKLTFHRHPVAQSTDCIRG+ G TKG H+WEV+WS RQRGTHAVVGV T DAP
Sbjct: 198 NIFVKEEDKLTFHRHPVAQSTDCIRGKTGLTKGLHVWEVNWSTRQRGTHAVVGVATQDAP 257

Query: 261 LHSVGYQ 267
           LHSVGYQ
Sbjct: 258 LHSVGYQ 264

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242020565|ref|XP_002430723.1| SPRY domain-containing SOCS box protein, putative [Pediculus humanus corporis] gi|212515913|gb|EEB17985.1| SPRY domain-containing SOCS box protein, putative [Pediculus humanus corporis]

 Score =  242 bits (617), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 113/133 (84%), Positives = 119/133 (89%), Gaps = 2/133 (1%)

Query: 137 MSMGQKISNGVKTVNRESSAPFKPVIPRELAHQ--RPGRLDIILDMPPASRETQVKHAWN 194
           M+MGQKIS GVK VNRES  PFKPVIPRELA    RP RLDI+LDMPPASR+ Q+KHAWN
Sbjct: 1   MNMGQKISGGVKNVNRESPQPFKPVIPRELAQDFARPARLDILLDMPPASRDCQIKHAWN 60

Query: 195 PEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGV 254
           PEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRG+VGFTKG H+WEVHWS RQRGTHAVVGV
Sbjct: 61  PEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGKVGFTKGLHVWEVHWSTRQRGTHAVVGV 120

Query: 255 GTIDAPLHSVGYQ 267
            T DAPLHSVGYQ
Sbjct: 121 ATQDAPLHSVGYQ 133

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270011657|gb|EFA08105.1| hypothetical protein TcasGA2_TC005709 [Tribolium castaneum]

 Score =  230 bits (587), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 117/168 (69%), Positives = 132/168 (78%), Gaps = 14/168 (8%)

Query: 102 LRELRRHNYKSCVFPNKTSASYQDHRHHRTRSGRGMSMGQKISNGVKTVNRESSAPFKPV 161
           L E+RR  YK+ V P KT            R  RGMSMGQK+S GVK VNR+++AP+KPV
Sbjct: 60  LCEVRR-AYKAAVVPCKTG----------RRRARGMSMGQKVS-GVKAVNRDAAAPYKPV 107

Query: 162 IPRELAHQ--RPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQ 219
           IPRELA    RP RLD++LDMP A RETQ+KH+WN +DRSLNIFVK+DDKLTFHRHPVAQ
Sbjct: 108 IPRELAQDFARPPRLDMLLDMPAALRETQLKHSWNQDDRSLNIFVKEDDKLTFHRHPVAQ 167

Query: 220 STDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQ 267
           STDCIRG+VGFTKG H WEV WS RQRGTHAVVGV T +APLHSVGYQ
Sbjct: 168 STDCIRGKVGFTKGMHCWEVCWSTRQRGTHAVVGVATAEAPLHSVGYQ 215

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195387433|ref|XP_002052400.1| GJ21895 [Drosophila virilis] gi|194148857|gb|EDW64555.1| GJ21895 [Drosophila virilis]

 Score =  230 bits (586), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 106/143 (74%), Positives = 122/143 (85%), Gaps = 3/143 (2%)

Query: 128 HHRTRSGRGMSMGQKISNGVKTVNR-ESSAPFKPVIPRELAHQ--RPGRLDIILDMPPAS 184
             R+RS RGM+MGQKIS GVKTVNR +S A FKP+IPREL     +P R+DI+LDMPPA+
Sbjct: 60  QRRSRSCRGMNMGQKISGGVKTVNRNDSQATFKPIIPRELQADFLKPARIDILLDMPPAN 119

Query: 185 RETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSAR 244
           RE Q+KH+WN EDRSLNIFVK+DDKLTFHRHPVAQSTDCIRG+VG TKG H+WE++W  R
Sbjct: 120 REVQLKHSWNSEDRSLNIFVKEDDKLTFHRHPVAQSTDCIRGKVGLTKGLHVWEIYWPTR 179

Query: 245 QRGTHAVVGVGTIDAPLHSVGYQ 267
           QRGTHAVVGV + DAPLHSVGYQ
Sbjct: 180 QRGTHAVVGVASADAPLHSVGYQ 202

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195053237|ref|XP_001993533.1| GH13013 [Drosophila grimshawi] gi|193900592|gb|EDV99458.1| GH13013 [Drosophila grimshawi]

 Score =  230 bits (586), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 116/181 (64%), Positives = 136/181 (75%), Gaps = 17/181 (9%)

Query: 92  SSRCTASGVELRELRRH--NYKSCVFPNKTSASYQDHRHHRTRSGRGMSMGQKISNGVKT 149
           S R   S +E R+  R   +YK  +          D R  R+RS RGM+MGQKIS GVKT
Sbjct: 34  SPRVVLSRLEARDFERLRLSYKVAI----------DQR--RSRSCRGMNMGQKISGGVKT 81

Query: 150 VNR-ESSAPFKPVIPRELAHQ--RPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKD 206
           VNR +S A FKP+IPREL     +P R+DI+LDMPPA+RE Q+KH+WN EDRSLNIFVK+
Sbjct: 82  VNRNDSQATFKPIIPRELQADFIKPARIDILLDMPPANREVQLKHSWNSEDRSLNIFVKE 141

Query: 207 DDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGY 266
           DDKLTFHRHPVAQSTDCIRG++G TKG HIWE++W  RQRGTHAVVGV + DAPLHSVGY
Sbjct: 142 DDKLTFHRHPVAQSTDCIRGKIGLTKGLHIWEIYWPTRQRGTHAVVGVASGDAPLHSVGY 201

Query: 267 Q 267
           Q
Sbjct: 202 Q 202

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195119167|ref|XP_002004103.1| GI18267 [Drosophila mojavensis] gi|193914678|gb|EDW13545.1| GI18267 [Drosophila mojavensis]

 Score =  229 bits (583), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 106/143 (74%), Positives = 122/143 (85%), Gaps = 3/143 (2%)

Query: 128 HHRTRSGRGMSMGQKISNGVKTVNR-ESSAPFKPVIPRELAHQ--RPGRLDIILDMPPAS 184
             R+RS RGM+MGQKIS GVKTVNR +S A FKP+IPREL     +P R+DI+LDMPPA+
Sbjct: 60  QRRSRSCRGMNMGQKISGGVKTVNRNDSQATFKPIIPRELQADFVKPARIDILLDMPPAN 119

Query: 185 RETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSAR 244
           RE Q+KH+WN EDRSLNIFVK+DDKLTFHRHPVAQSTDCIRG+VG TKG H+WE++W  R
Sbjct: 120 REVQLKHSWNSEDRSLNIFVKEDDKLTFHRHPVAQSTDCIRGKVGLTKGLHVWEIYWPTR 179

Query: 245 QRGTHAVVGVGTIDAPLHSVGYQ 267
           QRGTHAVVGV + DAPLHSVGYQ
Sbjct: 180 QRGTHAVVGVASGDAPLHSVGYQ 202

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195434162|ref|XP_002065072.1| GK14868 [Drosophila willistoni] gi|194161157|gb|EDW76058.1| GK14868 [Drosophila willistoni]

 Score =  228 bits (582), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 107/143 (74%), Positives = 122/143 (85%), Gaps = 3/143 (2%)

Query: 128 HHRTRSGRGMSMGQKISNGVKTVNR-ESSAPFKPVIPRELAHQ--RPGRLDIILDMPPAS 184
             R+RS RGM+MGQKIS GVKTV+R +S A FKP+IPREL     +P R+DI+LDMPPAS
Sbjct: 60  QRRSRSCRGMNMGQKISGGVKTVSRNDSQATFKPIIPRELQADFVKPARIDILLDMPPAS 119

Query: 185 RETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSAR 244
           RE Q+K++WN EDRSLNIFVK+DDKLTFHRHPVAQSTDCIRG+VG TKG HIWE++W  R
Sbjct: 120 REIQLKNSWNSEDRSLNIFVKEDDKLTFHRHPVAQSTDCIRGKVGLTKGLHIWEIYWPTR 179

Query: 245 QRGTHAVVGVGTIDAPLHSVGYQ 267
           QRGTHAVVGV T DAPLHSVGYQ
Sbjct: 180 QRGTHAVVGVATADAPLHSVGYQ 202

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195175553|ref|XP_002028506.1| GL15433 [Drosophila persimilis] gi|198460370|ref|XP_002135981.1| GA23998 [Drosophila pseudoobscura pseudoobscura] gi|194104048|gb|EDW26091.1| GL15433 [Drosophila persimilis] gi|198140050|gb|EDY70908.1| GA23998 [Drosophila pseudoobscura pseudoobscura]

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 107/143 (74%), Positives = 121/143 (84%), Gaps = 3/143 (2%)

Query: 128 HHRTRSGRGMSMGQKISNGVKTVNR-ESSAPFKPVIPRELAHQ--RPGRLDIILDMPPAS 184
             R+RS RGM+MGQKIS GVKTV+R +S A FKP+IPREL     +P R+DI+LDMPPA 
Sbjct: 60  QRRSRSCRGMNMGQKISGGVKTVSRNDSQATFKPIIPRELQADFLKPARIDILLDMPPAI 119

Query: 185 RETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSAR 244
           RE Q+KH+WN EDRSLNIFVK+DDKLTFHRHPVAQSTDCIRG+VG TKG HIWE++W  R
Sbjct: 120 RELQLKHSWNSEDRSLNIFVKEDDKLTFHRHPVAQSTDCIRGKVGLTKGLHIWEIYWPTR 179

Query: 245 QRGTHAVVGVGTIDAPLHSVGYQ 267
           QRGTHAVVGV T DAPLHSVGYQ
Sbjct: 180 QRGTHAVVGVSTADAPLHSVGYQ 202

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|289740615|gb|ADD19055.1| SOCS box protein ssB-1 [Glossina morsitans morsitans]

 Score =  228 bits (580), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 116/181 (64%), Positives = 137/181 (75%), Gaps = 16/181 (8%)

Query: 92  SSRCTASGVELRELRRH--NYKSCVFPNKTSASYQDHRHHRTRSGRGMSMGQKISNGVKT 149
           S R   S +E R+  R   +YK  V          D R  R+RS RGM+MGQKIS+ VKT
Sbjct: 28  SPRVVLSRLEPRDFERLRLSYKVAVI---------DQR--RSRSCRGMNMGQKISSSVKT 76

Query: 150 VNR-ESSAPFKPVIPRELAHQ--RPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKD 206
           VNR +S   FKP+IPRELA +  +P R+DI+LDMPPAS+E Q+KH+WNPEDRSLNIFVK+
Sbjct: 77  VNRNDSQTSFKPIIPRELAAEFAKPARIDILLDMPPASKEVQLKHSWNPEDRSLNIFVKE 136

Query: 207 DDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGY 266
           DDKLTFHRHPVAQSTDCIRG+VG TKG H+WE++W  RQRGTHAVVGV T +A LHSVGY
Sbjct: 137 DDKLTFHRHPVAQSTDCIRGKVGMTKGLHVWEIYWPTRQRGTHAVVGVATSEALLHSVGY 196

Query: 267 Q 267
           Q
Sbjct: 197 Q 197

Source: Glossina morsitans morsitans

Species: Glossina morsitans

Genus: Glossina

Family: Glossinidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195355755|ref|XP_002044354.1| GM26734 [Drosophila sechellia] gi|195565024|ref|XP_002106107.1| GD16681 [Drosophila simulans] gi|21429088|gb|AAM50263.1| LD34464p [Drosophila melanogaster] gi|194130659|gb|EDW52702.1| GM26734 [Drosophila sechellia] gi|194203478|gb|EDX17054.1| GD16681 [Drosophila simulans] gi|220946958|gb|ACL86022.1| gus-PA [synthetic construct] gi|220956582|gb|ACL90834.1| gus-PA [synthetic construct]

 Score =  227 bits (579), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 117/181 (64%), Positives = 136/181 (75%), Gaps = 17/181 (9%)

Query: 92  SSRCTASGVELRELRRH--NYKSCVFPNKTSASYQDHRHHRTRSGRGMSMGQKISNGVKT 149
           S R   S +E RE  R   +YK  +          D R  R+RS RGM+MGQKIS GVKT
Sbjct: 34  SPRVVLSRLEPREFERLRLSYKIAI----------DQR--RSRSCRGMNMGQKISGGVKT 81

Query: 150 VNR-ESSAPFKPVIPRELAHQ--RPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKD 206
           V+R +S + FKP+IPREL     +P R+DI+LDMPPASR+ Q+KH+WN EDRSLNIFVK+
Sbjct: 82  VSRNDSQSTFKPIIPRELQADFVKPARIDILLDMPPASRDLQLKHSWNSEDRSLNIFVKE 141

Query: 207 DDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGY 266
           DDKLTFHRHPVAQSTDCIRG+VG TKG HIWE++W  RQRGTHAVVGV T DAPLHSVGY
Sbjct: 142 DDKLTFHRHPVAQSTDCIRGKVGLTKGLHIWEIYWPTRQRGTHAVVGVCTADAPLHSVGY 201

Query: 267 Q 267
           Q
Sbjct: 202 Q 202

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	272
FB|FBgn0026238	363	gus "gustavus" [Drosophila mel	0.507	0.380	0.751	2.9e-55
UNIPROTKB|E1C2M3	273	SPSB4 "Uncharacterized protein	0.459	0.457	0.696	3e-46
ZFIN|ZDB-GENE-070911-3	277	spsb4a "splA/ryanodine recepto	0.466	0.458	0.679	1e-45
UNIPROTKB|E1C5U4	273	SPSB1 "Uncharacterized protein	0.466	0.465	0.623	7.3e-43
ZFIN|ZDB-GENE-030131-6122	273	spsb1 "splA/ryanodine receptor	0.466	0.465	0.630	2.5e-42
UNIPROTKB|F1MMF8	273	SPSB1 "SPRY domain-containing	0.466	0.465	0.615	1.1e-41
UNIPROTKB|Q5E9X6	273	SPSB1 "SPRY domain-containing	0.466	0.465	0.615	1.1e-41
UNIPROTKB|Q96BD6	273	SPSB1 "SPRY domain-containing	0.466	0.465	0.615	1.1e-41
MGI|MGI:1921896	273	Spsb1 "splA/ryanodine receptor	0.466	0.465	0.615	1.1e-41
UNIPROTKB|F1PE95	273	SPSB1 "Uncharacterized protein	0.466	0.465	0.615	1.4e-41

FB|FBgn0026238 gus "gustavus" [Drosophila melanogaster (taxid:7227)]

 Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
 Identities = 106/141 (75%), Positives = 122/141 (86%)

Query:   130 RTRSGRGMSMGQKISNGVKTVNR-ESSAPFKPVIPRELAHQ--RPGRLDIILDMPPASRE 186
             R+RS RGM+MGQKIS GVKTV+R +S + FKP+IPREL     +P R+DI+LDMPPASR+
Sbjct:    76 RSRSCRGMNMGQKISGGVKTVSRNDSQSTFKPIIPRELQADFVKPARIDILLDMPPASRD 135

Query:   187 TQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQR 246
              Q+KH+WN EDRSLNIFVK+DDKLTFHRHPVAQSTDCIRG+VG TKG HIWE++W  RQR
Sbjct:   136 LQLKHSWNSEDRSLNIFVKEDDKLTFHRHPVAQSTDCIRGKVGLTKGLHIWEIYWPTRQR 195

Query:   247 GTHAVVGVGTIDAPLHSVGYQ 267
             GTHAVVGV T DAPLHSVGYQ
Sbjct:   196 GTHAVVGVCTADAPLHSVGYQ 216

GO:0046843 "dorsal appendage formation" evidence=IMP

GO:0007314 "oocyte anterior/posterior axis specification" evidence=IMP

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|E1C2M3 SPSB4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 92/132 (69%), Positives = 107/132 (81%)

Query:   139 MGQKISNGVKTVN-RESSAPFKPVIPRELAHQ---RPGRLDIILDMPPASRETQVKHAWN 194
             MGQKIS  +K+V+ RE   PF+PV  REL      +P RLD++LDMPPA  E Q KHAWN
Sbjct:     1 MGQKISGSIKSVDVREP--PFRPV-KRELRGPDFCKPARLDMLLDMPPAKLEIQYKHAWN 57

Query:   195 PEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGV 254
              EDRSLNIFVK+DDKLTFHRHPVAQSTDCIRG+VG+T+G H+W++HW  RQRGTHAVVGV
Sbjct:    58 NEDRSLNIFVKEDDKLTFHRHPVAQSTDCIRGKVGYTRGLHVWQIHWPTRQRGTHAVVGV 117

Query:   255 GTIDAPLHSVGY 266
              T +APLHSVGY
Sbjct:   118 STAEAPLHSVGY 129

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0016567 "protein ubiquitination" evidence=IEA

ZFIN|ZDB-GENE-070911-3 spsb4a "splA/ryanodine receptor domain and SOCS box containing 4a" [Danio rerio (taxid:7955)]

 Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
 Identities = 89/131 (67%), Positives = 105/131 (80%)

Query:   139 MGQKISNGVKTVNRESSAPFKPVIPRELAHQ---RPGRLDIILDMPPASRETQVKHAWNP 195
             MGQKIS  +K+V+      F+P + REL      +P RLD++LDMPPAS E Q++HAWN 
Sbjct:     1 MGQKISGSIKSVDVRGEPSFRP-LRRELRGPDFFKPARLDLLLDMPPASYEQQLRHAWNS 59

Query:   196 EDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVG 255
             +DRSLNIF+KDDDKLTFHRHPVAQSTD IRGRVG+T+G H+W +HW ARQRGTHAVVGV 
Sbjct:    60 DDRSLNIFIKDDDKLTFHRHPVAQSTDGIRGRVGYTRGLHVWRIHWPARQRGTHAVVGVA 119

Query:   256 TIDAPLHSVGY 266
             T DAPLHSVGY
Sbjct:   120 TGDAPLHSVGY 130

GO:0035556 "intracellular signal transduction" evidence=IEA

UNIPROTKB|E1C5U4 SPSB1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
 Identities = 81/130 (62%), Positives = 102/130 (78%)

Query:   139 MGQKISNGVKTVNRESSA--PFKPVIPRELAHQRPGRLDIILDMPPASRETQVKHAWNPE 196
             MGQK++ G+KTV+       P K  + R L + +P RLD++LDMPP S E Q+ H+WN +
Sbjct:     1 MGQKVTGGIKTVDMRDPVYRPLKQELHR-LDYSKPTRLDLLLDMPPVSYEVQLLHSWNND 59

Query:   197 DRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGT 256
             DRSLN+FVK+DDKL FHRHPVAQSTD IRG+VG+T+G H+W++ W+ RQRGTHAVVGV T
Sbjct:    60 DRSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVAT 119

Query:   257 IDAPLHSVGY 266
              DAPLHSVGY
Sbjct:   120 ADAPLHSVGY 129

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0016567 "protein ubiquitination" evidence=IEA

ZFIN|ZDB-GENE-030131-6122 spsb1 "splA/ryanodine receptor domain and SOCS box containing 1" [Danio rerio (taxid:7955)]

 Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
 Identities = 82/130 (63%), Positives = 105/130 (80%)

Query:   139 MGQKISNGVKTVNRESSAPFKPVIP--RELAHQRPGRLDIILDMPPASRETQVKHAWNPE 196
             MGQK+  G+KTV+    A F+P+    + L + +P RLD++LDMP AS++ QV+H+WN +
Sbjct:     1 MGQKVPGGIKTVDMRDPA-FRPLKLELQALDYTKPSRLDMLLDMPSASQDIQVQHSWNND 59

Query:   197 DRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGT 256
             DRSLNIFVK+D+KL FHRHPVAQSTD IRGRVG+T+G H+WE+ W+ RQRGTHAVVGV T
Sbjct:    60 DRSLNIFVKEDNKLIFHRHPVAQSTDAIRGRVGYTRGLHVWEISWAMRQRGTHAVVGVAT 119

Query:   257 IDAPLHSVGY 266
              +APLHSVGY
Sbjct:   120 GEAPLHSVGY 129

GO:0035556 "intracellular signal transduction" evidence=IEA

UNIPROTKB|F1MMF8 SPSB1 "SPRY domain-containing SOCS box protein 1" [Bos taurus (taxid:9913)]

 Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
 Identities = 80/130 (61%), Positives = 104/130 (80%)

Query:   139 MGQKISNGVKTVN-RESS-APFKPVIPRELAHQRPGRLDIILDMPPASRETQVKHAWNPE 196
             MGQK++ G+KTV+ R+ +  P K  + + L + +P RLD++LDMPP S + Q+ H+WN  
Sbjct:     1 MGQKVTGGIKTVDMRDPTYRPLKQEL-QGLDYCKPTRLDLLLDMPPVSYDVQLLHSWNNN 59

Query:   197 DRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGT 256
             DRSLN+FVK+DDKL FHRHPVAQSTD IRG+VG+T+G H+W++ W+ RQRGTHAVVGV T
Sbjct:    60 DRSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVAT 119

Query:   257 IDAPLHSVGY 266
              DAPLHSVGY
Sbjct:   120 ADAPLHSVGY 129

GO:0016567 "protein ubiquitination" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

UNIPROTKB|Q5E9X6 SPSB1 "SPRY domain-containing SOCS box protein 1" [Bos taurus (taxid:9913)]

 Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
 Identities = 80/130 (61%), Positives = 104/130 (80%)

Query:   139 MGQKISNGVKTVN-RESS-APFKPVIPRELAHQRPGRLDIILDMPPASRETQVKHAWNPE 196
             MGQK++ G+KTV+ R+ +  P K  + + L + +P RLD++LDMPP S + Q+ H+WN  
Sbjct:     1 MGQKVTGGIKTVDMRDPTYRPLKQEL-QGLDYCKPTRLDLLLDMPPVSYDVQLLHSWNNN 59

Query:   197 DRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGT 256
             DRSLN+FVK+DDKL FHRHPVAQSTD IRG+VG+T+G H+W++ W+ RQRGTHAVVGV T
Sbjct:    60 DRSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVAT 119

Query:   257 IDAPLHSVGY 266
              DAPLHSVGY
Sbjct:   120 ADAPLHSVGY 129

GO:0016567 "protein ubiquitination" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

UNIPROTKB|Q96BD6 SPSB1 "SPRY domain-containing SOCS box protein 1" [Homo sapiens (taxid:9606)]

 Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
 Identities = 80/130 (61%), Positives = 104/130 (80%)

Query:   139 MGQKISNGVKTVN-RESS-APFKPVIPRELAHQRPGRLDIILDMPPASRETQVKHAWNPE 196
             MGQK++ G+KTV+ R+ +  P K  + + L + +P RLD++LDMPP S + Q+ H+WN  
Sbjct:     1 MGQKVTGGIKTVDMRDPTYRPLKQEL-QGLDYCKPTRLDLLLDMPPVSYDVQLLHSWNNN 59

Query:   197 DRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGT 256
             DRSLN+FVK+DDKL FHRHPVAQSTD IRG+VG+T+G H+W++ W+ RQRGTHAVVGV T
Sbjct:    60 DRSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVAT 119

Query:   257 IDAPLHSVGY 266
              DAPLHSVGY
Sbjct:   120 ADAPLHSVGY 129

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0016567 "protein ubiquitination" evidence=IEA

MGI|MGI:1921896 Spsb1 "splA/ryanodine receptor domain and SOCS box containing 1" [Mus musculus (taxid:10090)]

 Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
 Identities = 80/130 (61%), Positives = 104/130 (80%)

Query:   139 MGQKISNGVKTVN-RESS-APFKPVIPRELAHQRPGRLDIILDMPPASRETQVKHAWNPE 196
             MGQK++ G+KTV+ R+ +  P K  + + L + +P RLD++LDMPP S + Q+ H+WN  
Sbjct:     1 MGQKVTGGIKTVDMRDPTYRPLKQEL-QGLDYCKPTRLDLLLDMPPVSYDVQLLHSWNNN 59

Query:   197 DRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGT 256
             DRSLN+FVK+DDKL FHRHPVAQSTD IRG+VG+T+G H+W++ W+ RQRGTHAVVGV T
Sbjct:    60 DRSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVAT 119

Query:   257 IDAPLHSVGY 266
              DAPLHSVGY
Sbjct:   120 ADAPLHSVGY 129

GO:0005737 "cytoplasm" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

UNIPROTKB|F1PE95 SPSB1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
 Identities = 80/130 (61%), Positives = 104/130 (80%)

Query:   139 MGQKISNGVKTVN-RESS-APFKPVIPRELAHQRPGRLDIILDMPPASRETQVKHAWNPE 196
             MGQK++ G+KTV+ R+ +  P K  + + L + +P RLD++LDMPP S + Q+ H+WN  
Sbjct:     1 MGQKVTGGIKTVDMRDPTYRPLKQEL-QGLDYCKPTRLDLLLDMPPVSYDIQLLHSWNNN 59

Query:   197 DRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGT 256
             DRSLN+FVK+DDKL FHRHPVAQSTD IRG+VG+T+G H+W++ W+ RQRGTHAVVGV T
Sbjct:    60 DRSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVAT 119

Query:   257 IDAPLHSVGY 266
              DAPLHSVGY
Sbjct:   120 ADAPLHSVGY 129

GO:0016567 "protein ubiquitination" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5E9X6	SPSB1_BOVIN	No assigned EC number	0.5939	0.4779	0.4761	yes	N/A
Q9D5L7	SPSB1_MOUSE	No assigned EC number	0.5939	0.4779	0.4761	yes	N/A
Q96BD6	SPSB1_HUMAN	No assigned EC number	0.5939	0.4779	0.4761	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	272
cd12906	174	cd12906, SPRY_SOCS1-2-4, SPRY domain in the suppre	4e-56
cd12875	171	cd12875, SPRY_SOCS_Fbox, SPRY domain in Fbxo45 and	1e-38
cd12907	175	cd12907, SPRY_Fbox, SPRY domain in the F-box famil	1e-23
cd12876	187	cd12876, SPRY_SOCS3, SPRY domain in the suppressor	1e-07

>gnl|CDD|240486 cd12906, SPRY_SOCS1-2-4, SPRY domain in the suppressor of cytokine signaling 1, 2, 4 families (SOCS1, SOCS2, SOCS4)

 Score =  177 bits (452), Expect = 4e-56
 Identities = 60/77 (77%), Positives = 69/77 (89%)

Query: 191 HAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHA 250
           HAWNPEDRSLNIFVK+DD LTFHRHPVAQSTD IRG+VG+++G H+WE++W  RQRGTHA
Sbjct: 1   HAWNPEDRSLNIFVKEDDPLTFHRHPVAQSTDGIRGKVGYSRGLHVWEINWPTRQRGTHA 60

Query: 251 VVGVGTIDAPLHSVGYQ 267
           VVGV T +APLH VGYQ
Sbjct: 61  VVGVATAEAPLHCVGYQ 77

The SPRY domain-containing SOCS box protein family (SPSB1-4, also known as SSB-1 to -4) is composed of a central SPRY protein interaction domain and a C-terminal SOCS box. All four SPSB proteins interact with c-Met, the hepatocyte growth factor receptor, but only SPSB1, SPSB2, and SPSB4 interact with prostate apoptosis response protein 4 (Par-4). They are negative regulators that recruit the ECS E3 ubiquitin ligase complex to polyubiquitinate inducible nitric-oxide synthase (iNOS), resulting in its proteasomal degradation, thus contributing to protection against the cytotoxic effect of iNOS in activated macrophages. It has been shown that SPSB1 and SPSB4 induce the degradation of iNOS more strongly than SPSB2. The Drosophila melanogaster SPSB1 homolog, GUSTAVUS, interacts with the DEAD box RNA helicase Vasa. Suppressor of cytokine signaling (SOCS) proteins negatively regulate signaling from JAK-associated cytokine receptor complexes, and play key roles in the regulation of immune homeostasis. Length = 174

>gnl|CDD|240455 cd12875, SPRY_SOCS_Fbox, SPRY domain in Fbxo45 and suppressors of cytokine signaling (SOCS) proteins

 Score =  132 bits (334), Expect = 1e-38
 Identities = 50/76 (65%), Positives = 59/76 (77%), Gaps = 1/76 (1%)

Query: 191 HAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHA 250
           HAWNP D S NI++K+D  LTFHR PVAQSTD IRG++G+++G H WEV W  RQRG+HA
Sbjct: 1   HAWNPADCSKNIYIKED-GLTFHRRPVAQSTDAIRGKIGYSRGLHAWEVKWEGRQRGSHA 59

Query: 251 VVGVGTIDAPLHSVGY 266
           VVGV T DAPL   GY
Sbjct: 60  VVGVATKDAPLQCDGY 75

This family consists of the SPRY domain-containing SOCS box protein family (SPSB1-4, also known as SSB-1 to -4) as well as F-box protein 45 (Fbxo45), a novel synaptic E3 and ubiquitin ligase. The SPSB protein is composed of a central SPRY protein interaction domain and a C-terminal SOCS box. SPSB1, SPSB2, and SPSB4 interact with prostate apoptosis response protein 4 (Par-4) and are negative regulators that recruit the ECS E3 ubiquitin ligase complex to polyubiquitinate inducible nitric-oxide synthase (iNOS), resulting in its proteasomal degradation. Fbxo45 is related to this family; it is located N-terminal to the SPRY domain, and known to induce the degradation of a synaptic vesicle-priming factor, Munc13-1, via the SPRY domain, thus playing an important role in the regulation of neurotransmission by modulating Munc13-1 at the synapse. Suppressor of cytokine signaling (SOCS) proteins negatively regulate signaling from JAK-associated cytokine receptor complexes, and play key roles in the regulation of immune homeostasis. Length = 171

>gnl|CDD|240487 cd12907, SPRY_Fbox, SPRY domain in the F-box family Fbxo45

 Score = 94.1 bits (234), Expect = 1e-23
 Identities = 41/76 (53%), Positives = 51/76 (67%), Gaps = 2/76 (2%)

Query: 191 HAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHA 250
           HAWNP D S N+++K +   T HR+PVAQSTD  RG++GF+ G H WEV W     GT A
Sbjct: 1   HAWNPNDCSRNVYIKPNG-FTLHRNPVAQSTDGARGKIGFSSGRHAWEVWWEG-PLGTVA 58

Query: 251 VVGVGTIDAPLHSVGY 266
           VVG+ T +APL   GY
Sbjct: 59  VVGIATKEAPLQCHGY 74

Fbxo45 is a novel synaptic E3 and ubiquitin ligase, related to the suppressor of cytokine signaling (SOCS) proteins and located N-terminal to a SPRY (SPla and the ryanodine receptor) domain. Fbxo45 induces the degradation of a synaptic vesicle-priming factor, Munc13-1, via the SPRY domain, thus playing an important role in the regulation of neurotransmission by modulating Munc13-1 at the synapse. F-box motifs are found in proteins that function as the substrate recognition component of SCF E3 complexes. Length = 175

>gnl|CDD|240456 cd12876, SPRY_SOCS3, SPRY domain in the suppressor of cytokine signaling 3 (SOCS3) family

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 5/80 (6%)

Query: 193 WNPEDRSLN-IFVKDDDKLTFHRHPV-AQSTDCIRGRVGFTK-GFHIWEVHWSARQRGTH 249
           W+ +D+S + +  +D+ ++ FH  P  +  T  +RG    T+ G H WE+   +   GT 
Sbjct: 4   WDEDDKSPSVVLSEDNREVYFH--PDYSCGTAAVRGSKPLTEGGQHYWEIKMLSPVYGTS 61

Query: 250 AVVGVGTIDAPLHSVGYQII 269
            +VG+GT DA LH+  Y+  
Sbjct: 62  MMVGIGTDDADLHAYRYEFC 81

The SPRY domain-containing SOCS box protein family (SPSB1-4, also known as SSB-1 to -4) is composed of a central SPRY protein interaction domain and a C-terminal SOCS box. All four SPSB proteins interact with c-Met, the hepatocyte growth factor receptor, but SOCS3 regulates cellular response to a variety of cytokines such as leukemia inhibitory factor (LIF) and interleukin 6. SOCS3, along with SOCS1, are expressed by immune cells and cells of the central nervous system (CNS) and have the potential to impact immune processes within the CNS. In non-small cell lung cancer (NSCLC), SOCS3 is silenced and proline-rich tyrosine kinase 2 (Pyk2) is over-expressed; it has been suggested that SOCS3 could be an effective way to prevent the progression of NSCLC due to its role in regulating Pyk2 expression. Length = 187

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	272
KOG3953|consensus	242		100.0
KOG4367|consensus	699		94.72
KOG2626|consensus	544		94.36
smart00449	122	SPRY Domain in SPla and the RYanodine Receptor. Do	83.66

>KOG3953|consensus

Probab=100.00  E-value=8.9e-37  Score=274.43  Aligned_cols=103  Identities=58%  Similarity=0.986  Sum_probs=100.7

Q ss_pred             CCCchhhhhccCCCCCcccccccccCCCCCCCCeEEecCCeeEEEEcccccccchhccccccccceeEEEEEecCCCCcc
Q psy8040         169 QRPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGT  248 (272)
Q Consensus       169 ~~p~RlD~LL~~PP~~~~~q~~waWNp~DrS~NI~LK~ddklTfHRHPVaQSTDaIRGKkGls~G~H~WEI~W~~r~rGT  248 (272)
                      .+|.|++.|++|||...+.+..|+||+.|||.|+++|+++++||||||||||||+||||+||++|+|+|||.|+.+|+||
T Consensus         5 ~~~~~l~~l~~~~~~~~~~~~~~~w~~~drs~nv~vk~~~~~tfhrhpvaqstd~~rGk~g~~~g~h~w~i~w~~r~~GT   84 (242)
T KOG3953|consen    5 TESVRLDQLLFMPPSALGVQAQHGWSPSDRSLNVFVKLPDGLTFHRHPVAQSTDGIRGKRGYSRGRHAWEIAWPNRQRGT   84 (242)
T ss_pred             ccccccchhhhcCCcchhhHHhhccCcccccceeEEecCCcceEEecCCccccccccceeeeccCceEEEEEecCCccCC
Confidence            67889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEeeecCCccccCCCcccccc
Q psy8040         249 HAVVGVGTIDAPLHSVGYQIIRF  271 (272)
Q Consensus       249 hAMVGVgTkeApLh~~GY~sLl~  271 (272)
                      ||||||+||.|||||.||++||+
T Consensus        85 ~avVGIaTk~Aplha~gy~aLlG  107 (242)
T KOG3953|consen   85 HAVVGIATKVAPLHAVGYTALLG  107 (242)
T ss_pred             cceEEEEcccCchhhhHHHHHhC
Confidence            99999999999999999999986

>KOG4367|consensus

Probab=94.72  E-value=0.023  Score=57.54  Aligned_cols=65  Identities=25%  Similarity=0.459  Sum_probs=45.4

Q ss_pred             ccccCCCC---CCCCeEEecCCeeEEEEcccccc--cchhccccccccceeEEEEEecCCCCcceEEEeeecCCc
Q psy8040         190 KHAWNPED---RSLNIFVKDDDKLTFHRHPVAQS--TDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDA  259 (272)
Q Consensus       190 ~waWNp~D---rS~NI~LK~ddklTfHRHPVaQS--TDaIRGKkGls~G~H~WEI~W~~r~rGThAMVGVgTkeA  259 (272)
                      +.+|=.-+   ....+.++.++ +|+.-    +|  --.|-|+++|++|.||||+....----.+.+|||+--.+
T Consensus       531 ~vawfqlt~spsqrdmilsnec-atlsg----ssleyrtilgsiafskgvhywevtidrhdgnsdivigvaqpav  600 (699)
T KOG4367|consen  531 EVAWFQLTPSPSQRDMILSNEC-ATLSG----SSLEYRTILGSIAFSKGVHYWEVTIDRHDGNSDIVIGVAQPAV  600 (699)
T ss_pred             ceeeeeccCCchhhceeeeccc-ceecc----cccchheeeeecccccceeEEEEEEeccCCCCCceEEecchhh
Confidence            44554444   44567777664 77532    22  356889999999999999999943345788999997544

>KOG2626|consensus

Probab=94.36  E-value=0.064  Score=54.55  Aligned_cols=72  Identities=21%  Similarity=0.408  Sum_probs=61.9

Q ss_pred             ccccCCCCCCCCeEEecCCeeEEEEcccccccchhccccccccceeEEEEEecCCCCcceEEEeeecCCccccC-CCcc
Q psy8040         190 KHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHS-VGYQ  267 (272)
Q Consensus       190 ~waWNp~DrS~NI~LK~ddklTfHRHPVaQSTDaIRGKkGls~G~H~WEI~W~~r~rGThAMVGVgTkeApLh~-~GY~  267 (272)
                      .-+|  .|+..++.|++| ++|+.-.   -+--.||++.|+.+|--|+||+...-+=++|+=+|.++..++|++ .||.
T Consensus       294 ~l~~--hdrA~ql~Is~d-rlt~tge---KGy~MvRAshgv~~G~WYFEI~vd~~pd~~a~RlGwsq~~g~LqApvGYd  366 (544)
T KOG2626|consen  294 NLSW--HDRAEQLKISED-RLTATGE---KGYRMVRASHGVLEGAWYFEIKVDEMPDDAAIRLGWSQLYGNLQAPVGYD  366 (544)
T ss_pred             hhhh--hccccccccccc-ceeeecc---cceeeeeecccccccceeEEEEeecCCCccceeeeccccccccccccccc
Confidence            4567  789999999987 4776532   366789999999999999999999889999999999999999988 5775

>smart00449 SPRY Domain in SPla and the RYanodine Receptor

Probab=83.66  E-value=0.74  Score=34.99  Aligned_cols=12  Identities=33%  Similarity=0.415  Sum_probs=10.1

Q ss_pred             cceeEEEEEecC
Q psy8040         232 KGFHIWEVHWSA  243 (272)
Q Consensus       232 ~G~H~WEI~W~~  243 (272)
                      .|+|||||++..
T Consensus         1 sG~~YwEV~v~~   12 (122)
T smart00449        1 SGRHYFEVEIFD   12 (122)
T ss_pred             CCcEEEEEEEcC
Confidence            489999999854

Domain of unknown function. Distant homologues are domains in butyrophilin/marenostrin/pyrin homologues.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	272
2ihs_A	214	Crystal Structure Of The B30.2SPRY DOMAIN OF GUSTAV		7e-46
2fnj_A	226	Crystal Structure Of A B30.2SPRY DOMAIN-Containing		8e-46
3f2o_A	233	Crystal Structure Of Human SplaRYANODINE RECEPTOR D		2e-40
2jk9_A	212	The Structure Of Spla-Ryanodine Receptor Domain And		4e-40
2v24_A	208	Structure Of The Human Spry Domain-Containing Socs		1e-39
3emw_A	217	Crystal Structure Of Human SplaRYANODINE RECEPTOR D		2e-21
2afj_A	226	Spry Domain-Containing Socs Box Protein 2 (Ssb-2) L		2e-21
3ek9_A	213	Spry Domain-Containing Socs Box Protein 2: Crystal		2e-21

>pdb|2IHS|A Chain A, Crystal Structure Of The B30.2SPRY DOMAIN OF GUSTAVUS IN Complex With A 20-Residue Vasa Peptide Length = 214

Iteration: 1
 Score =  180 bits (457), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 79/98 (80%), Positives = 89/98 (90%)
Query: 170 RPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVG 229
           +P R+DI+LDMPPASR+ Q+KH+WN EDRSLNIFVK+DDKLTFHRHPVAQSTDCIRG+VG
Sbjct: 12  KPARIDILLDMPPASRDLQLKHSWNSEDRSLNIFVKEDDKLTFHRHPVAQSTDCIRGKVG 71
Query: 230 FTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQ 267
            TKG HIWE++W  RQRGTHAVVGV T DAPLHSVGYQ
Sbjct: 72  LTKGLHIWEIYWPTRQRGTHAVVGVCTADAPLHSVGYQ 109

>pdb|2FNJ|A Chain A, Crystal Structure Of A B30.2SPRY DOMAIN-Containing Protein Gustavus In Complex With Elongin B And Elongin C Length = 226

Iteration: 1
 Score =  180 bits (456), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 79/98 (80%), Positives = 89/98 (90%)
Query: 170 RPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVG 229
           +P R+DI+LDMPPASR+ Q+KH+WN EDRSLNIFVK+DDKLTFHRHPVAQSTDCIRG+VG
Sbjct: 10  KPARIDILLDMPPASRDLQLKHSWNSEDRSLNIFVKEDDKLTFHRHPVAQSTDCIRGKVG 69
Query: 230 FTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQ 267
            TKG HIWE++W  RQRGTHAVVGV T DAPLHSVGYQ
Sbjct: 70  LTKGLHIWEIYWPTRQRGTHAVVGVCTADAPLHSVGYQ 107

>pdb|3F2O|A Chain A, Crystal Structure Of Human SplaRYANODINE RECEPTOR DOMAIN AND SOCS BOX Containing 1 (Spsb1) In Complex With A 20-Residue Vasa Peptide Length = 233

Iteration: 1
 Score =  162 bits (409), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 69/104 (66%), Positives = 86/104 (82%)
Query: 166 LAHQRPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIR 225
           L + +P RLD++LDMPP S + Q+ H+WN  DRSLN+FVK+DDKL FHRHPVAQSTD IR
Sbjct: 29  LDYCKPTRLDLLLDMPPVSYDVQLLHSWNNNDRSLNVFVKEDDKLIFHRHPVAQSTDAIR 88
Query: 226 GRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQII 269
           G+VG+T+G H+W++ W+ RQRGTHAVVGV T DAPLHSVGY  +
Sbjct: 89  GKVGYTRGLHVWQITWAMRQRGTHAVVGVATADAPLHSVGYTTL 132

>pdb|2JK9|A Chain A, The Structure Of Spla-Ryanodine Receptor Domain And Socs Box Containing 1 In Complex With A Par-4 Peptide Length = 212

Iteration: 1
 Score =  161 bits (407), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 69/104 (66%), Positives = 86/104 (82%)
Query: 166 LAHQRPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIR 225
           L + +P RLD++LDMPP S + Q+ H+WN  DRSLN+FVK+DDKL FHRHPVAQSTD IR
Sbjct: 8   LDYCKPTRLDLLLDMPPVSYDVQLLHSWNNNDRSLNVFVKEDDKLIFHRHPVAQSTDAIR 67
Query: 226 GRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQII 269
           G+VG+T+G H+W++ W+ RQRGTHAVVGV T DAPLHSVGY  +
Sbjct: 68  GKVGYTRGLHVWQITWAMRQRGTHAVVGVATADAPLHSVGYTTL 111

>pdb|2V24|A Chain A, Structure Of The Human Spry Domain-Containing Socs Box Protein Ssb-4 Length = 208

Iteration: 1
 Score =  159 bits (403), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 71/100 (71%), Positives = 82/100 (82%)
Query: 170 RPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVG 229
           RP RLD +LDMP A    Q++HAWNPEDRSLN+FVKDDD+LTFHRHPVAQSTD IRG+VG
Sbjct: 8   RPARLDQLLDMPAAGLAVQLRHAWNPEDRSLNVFVKDDDRLTFHRHPVAQSTDGIRGKVG 67
Query: 230 FTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQII 269
             +G H W+++W ARQRGTHAVVGV T  APLHSVGY  +
Sbjct: 68  HARGLHAWQINWPARQRGTHAVVGVATARAPLHSVGYTAL 107

>pdb|3EMW|A Chain A, Crystal Structure Of Human SplaRYANODINE RECEPTOR DOMAIN AND SOCS BOX Containing 2 (Spsb2) In Complex With A 20-Residue Vasa Peptide Length = 217

Iteration: 1
 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 48/93 (51%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 171 PGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGF 230
           P  L+ +L  PP     Q +H WNP+D S NI VK+   L F R PVAQSTD  RG+ G+
Sbjct: 24  PEGLEELLSAPPPDLGAQRRHGWNPKDCSENIEVKEGG-LYFERRPVAQSTDGARGKRGY 82
Query: 231 TKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHS 263
           ++G H WE+ W   QRGTHAVVGV T  APL +
Sbjct: 83  SRGLHAWEISWPLEQRGTHAVVGVATALAPLQT 115

>pdb|2AFJ|A Chain A, Spry Domain-Containing Socs Box Protein 2 (Ssb-2) Length = 226

Iteration: 1
 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/99 (49%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 171 PGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGF 230
           P  L+ +L  PP     Q  H WNP+D S NI VK+   L F R PVAQSTD +RG+ G+
Sbjct: 21  PEGLEELLSAPPPDLVAQRHHGWNPKDCSENIDVKEGG-LCFERRPVAQSTDGVRGKRGY 79
Query: 231 TKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQII 269
           ++G H WE+ W   QRGTHAVVGV T  APL +  Y  +
Sbjct: 80  SRGLHAWEISWPLEQRGTHAVVGVATALAPLQADHYAAL 118

>pdb|3EK9|A Chain A, Spry Domain-Containing Socs Box Protein 2: Crystal Structure And Residues Critical For Protein Binding Length = 213

Iteration: 1
 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/99 (49%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 171 PGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGF 230
           P  L+ +L  PP     Q  H WNP+D S NI VK+   L F R PVAQSTD +RG+ G+
Sbjct: 15  PEGLEELLSAPPPDLVAQRHHGWNPKDCSENIDVKEGG-LCFERRPVAQSTDGVRGKRGY 73
Query: 231 TKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQII 269
           ++G H WE+ W   QRGTHAVVGV T  APL +  Y  +
Sbjct: 74  SRGLHAWEISWPLEQRGTHAVVGVATALAPLQADHYAAL 112

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	272
2jk9_A	212	SPRY domain-containing SOCS box protein 1; transcr	5e-38
2afj_A	226	Gene rich cluster, C9 gene; beta sandwich, gene re	4e-35
3emw_A	217	SPRY domain-containing SOCS box protein 2; apoptos	4e-35
3toj_A	213	SET1/ASH2 histone methyltransferase complex subun;	1e-07
2yyo_A	171	SPRY domain-containing protein 3; NPPSFA, national	2e-05

>2jk9_A SPRY domain-containing SOCS box protein 1; transcription regulation, transcription; 1.79A {Homo sapiens} PDB: 3f2o_A 2fnj_A 2v24_A 2ihs_A Length = 212

 Score =  132 bits (332), Expect = 5e-38
 Identities = 69/105 (65%), Positives = 86/105 (81%)

Query: 163 PRELAHQRPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTD 222
            + L + +P RLD++LDMPP S + Q+ H+WN  DRSLN+FVK+DDKL FHRHPVAQSTD
Sbjct: 5   LQGLDYCKPTRLDLLLDMPPVSYDVQLLHSWNNNDRSLNVFVKEDDKLIFHRHPVAQSTD 64

Query: 223 CIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQ 267
            IRG+VG+T+G H+W++ W+ RQRGTHAVVGV T DAPLHSVGY 
Sbjct: 65  AIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVATADAPLHSVGYT 109

>2afj_A Gene rich cluster, C9 gene; beta sandwich, gene regulation; NMR {Mus musculus} SCOP: b.29.1.22 Length = 226

 Score =  125 bits (314), Expect = 4e-35
 Identities = 53/116 (45%), Positives = 65/116 (56%), Gaps = 3/116 (2%)

Query: 154 SSAPFKPVIPRELAHQ--RPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLT 211
           SSA       + L      P  L+ +L  PP     Q  H WNP+D S NI VK+   L 
Sbjct: 2   SSARQSTPTSQALYSDFSPPEGLEELLSAPPPDLVAQRHHGWNPKDCSENIDVKEGG-LC 60

Query: 212 FHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQ 267
           F R PVAQSTD +RG+ G+++G H WE+ W   QRGTHAVVGV T  APL +  Y 
Sbjct: 61  FERRPVAQSTDGVRGKRGYSRGLHAWEISWPLEQRGTHAVVGVATALAPLQADHYA 116

>3emw_A SPRY domain-containing SOCS box protein 2; apoptosis nucleus, apoptosis, UBL conjugation pathwayc, CL transcription regulation, transcription, phosphoprotein; 1.80A {Homo sapiens} PDB: 3ek9_A Length = 217

 Score =  124 bits (313), Expect = 4e-35
 Identities = 54/142 (38%), Positives = 66/142 (46%), Gaps = 24/142 (16%)

Query: 126 HRHHRTRSGRGMSMGQKISNGVKTVNRESSAPFKPVIPRELAHQRPGRLDIILDMPPASR 185
           H HH   SG  +                                 P  L+ +L  PP   
Sbjct: 2   HHHHHHSSGVDLGTENLYFQ-----------------------SMPEGLEELLSAPPPDL 38

Query: 186 ETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQ 245
             Q +H WNP+D S NI VK+   L F R PVAQSTD  RG+ G+++G H WE+ W   Q
Sbjct: 39  GAQRRHGWNPKDCSENIEVKEGG-LYFERRPVAQSTDGARGKRGYSRGLHAWEISWPLEQ 97

Query: 246 RGTHAVVGVGTIDAPLHSVGYQ 267
           RGTHAVVGV T  APL +  Y 
Sbjct: 98  RGTHAVVGVATALAPLQTDHYA 119

>3toj_A SET1/ASH2 histone methyltransferase complex subun; transcription, SPRY domain, prote binding, histone methylation, RBBP5, DPY-30, nuclear; 2.07A {Homo sapiens} Length = 213

 Score = 50.3 bits (120), Expect = 1e-07
 Identities = 16/82 (19%), Positives = 26/82 (31%), Gaps = 12/82 (14%)

Query: 193 WNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVV 252
               DR+  + +  DD+LT       +    +R   G  KG   +E+        T A +
Sbjct: 15  LALHDRAPQLKI-SDDRLTVVGE---KGYSMVRASHGVRKGAWYFEITVDEMPPDTAARL 70

Query: 253 GVGTIDAPL--------HSVGY 266
           G       L         S  +
Sbjct: 71  GWSQPLGNLQAPLGYDKFSYSW 92

>2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens} Length = 171

 Score = 43.4 bits (102), Expect = 2e-05
 Identities = 15/78 (19%), Positives = 20/78 (25%), Gaps = 9/78 (11%)

Query: 197 DRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGT 256
             S    +  D   T   H  +    C       TK  + +EV            VG+  
Sbjct: 4   GSSGFKHILVD-GDTLSYHGNSGEVGCYVASRPLTKDSNYFEVSIVDSGVRGTIAVGLVP 62

Query: 257 IDAPL--------HSVGY 266
               L         SV Y
Sbjct: 63  QYYSLDHQPGWLPDSVAY 80

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	272
2jk9_A	212	SPRY domain-containing SOCS box protein 1; transcr	99.82
2afj_A	226	Gene rich cluster, C9 gene; beta sandwich, gene re	99.8
3emw_A	217	SPRY domain-containing SOCS box protein 2; apoptos	99.75
3toj_A	213	SET1/ASH2 histone methyltransferase complex subun;	99.17
2yyo_A	171	SPRY domain-containing protein 3; NPPSFA, national	98.91
2wl1_A	191	Pyrin, marenostrin; amyloidosis, polymorphism, cyt	98.4
2fbe_A	201	Predicted: similar to RET finger protein-like 1; d	98.39
3kb5_A	193	Tripartite motif-containing protein 72; B30.2, gus	98.16
2vok_A	188	52 kDa RO protein; polymorphism, immune system, me	98.07
3uv9_A	186	TRIM5alpha, tripartite motif-containing protein 5;	98.05
4b3n_A	602	Maltose-binding periplasmic protein, tripartite mo	96.76

>2jk9_A SPRY domain-containing SOCS box protein 1; transcription regulation, transcription; 1.79A {Homo sapiens} PDB: 3f2o_A 2fnj_A 2v24_A 2ihs_A

Probab=99.82  E-value=4.4e-21  Score=161.04  Aligned_cols=102  Identities=67%  Similarity=1.214  Sum_probs=94.0

Q ss_pred             CCCchhhhhccCCCCCcccccccccCCCCCCCCeEEecCCeeEEEEcccccccchhccccccccceeEEEEEecCCCCcc
Q psy8040         169 QRPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGT  248 (272)
Q Consensus       169 ~~p~RlD~LL~~PP~~~~~q~~waWNp~DrS~NI~LK~ddklTfHRHPVaQSTDaIRGKkGls~G~H~WEI~W~~r~rGT  248 (272)
                      ..|.++|+|++|||.....+..++||++++++++.|++|++++++++|+.+++++|||+.||+.|+|||||+|...+.+|
T Consensus        11 ~~~~~~~~ll~~p~~~~~~~~~~tldp~ta~~~L~lsed~~~~~~~~~~~~~~~~Vlg~~~f~sGrhYWEV~v~~~~~~~   90 (212)
T 2jk9_A           11 CKPTRLDLLLDMPPVSYDVQLLHSWNNNDRSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITWAMRQRGT   90 (212)
T ss_dssp             CCCCHHHHHHHSCCCCHHHHHHTSEEEEEECTTEEEETTEEEEEEECCBTTEEEEEEESCCBCSSEEEEEEECCGGGCTT
T ss_pred             CCccchhhhccCCCcccccccccccChhhcCCceEEeCCCeEEEEECCCCCccceEEcCCCccCCeEEEEEEEecccCCC
Confidence            67999999999999888889999999999999999999877899999998899999999999999999999999777899


Q ss_pred             eEEEeeecCCccccCCCccccc
Q psy8040         249 HAVVGVGTIDAPLHSVGYQIIR  270 (272)
Q Consensus       249 hAMVGVgTkeApLh~~GY~sLl  270 (272)
                      +++|||+++.++++..|+..++
T Consensus        91 ~w~vGV~~~~~~r~~~g~~~~~  112 (212)
T 2jk9_A           91 HAVVGVATADAPLHSVGYTTLV  112 (212)
T ss_dssp             CCEEEEECTTSCCEEESSCCCT
T ss_pred             cEEEEEEcCCccccccCccccc
Confidence            9999999999999766666554

>2afj_A Gene rich cluster, C9 gene; beta sandwich, gene regulation; NMR {Mus musculus} SCOP: b.29.1.22

Probab=99.80  E-value=7.9e-20  Score=155.73  Aligned_cols=101  Identities=49%  Similarity=0.844  Sum_probs=94.0

Q ss_pred             CCCchhhhhccCCCCCcccccccccCCCCCCCCeEEecCCeeEEEEcccccccchhccccccccceeEEEEEecCCCCcc
Q psy8040         169 QRPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGT  248 (272)
Q Consensus       169 ~~p~RlD~LL~~PP~~~~~q~~waWNp~DrS~NI~LK~ddklTfHRHPVaQSTDaIRGKkGls~G~H~WEI~W~~r~rGT  248 (272)
                      ..|.|+|+|++|||..+..+..++||+++.++++.|++|+ ++|+++|+.+++++|||+.||+.|+|||||+|.....||
T Consensus        19 ~~~~~~~~l~~~p~~~~~~~~~~tLDp~ta~~~L~lSed~-~~v~~~~~~~~~~~Vlg~~~f~sGrhYWEV~V~~~~~~~   97 (226)
T 2afj_A           19 SPPEGLEELLSAPPPDLVAQRHHGWNPKDCSENIDVKEGG-LCFERRPVAQSTDGVRGKRGYSRGLHAWEISWPLEQRGT   97 (226)
T ss_dssp             CCCSSSHHHHSSCCTTSSHHHHHSSCCSSSCCSSEEETTT-TEEECSSCTTTSSSEEECCCCCCSEEEEEEECCCCSSSC
T ss_pred             CCccccceeccCCCCccccccccEEccccCCCCEEEeCCC-EEEEECCCCCCcCeEEECCCccCCEEEEEEEEeccCCCC
Confidence            7899999999999999999999999999999999999986 799999999999999999999999999999999777899


Q ss_pred             eEEEeeecCCccccCCCccccc
Q psy8040         249 HAVVGVGTIDAPLHSVGYQIIR  270 (272)
Q Consensus       249 hAMVGVgTkeApLh~~GY~sLl  270 (272)
                      ..+|||+++.++++..|+..++
T Consensus        98 ~w~vGV~~~s~~~~r~~~~~~~  119 (226)
T 2afj_A           98 HAVVGVATALAPLQADHYAALL  119 (226)
T ss_dssp             CCEEEEEESSCCCSSCSSSCCC
T ss_pred             CEEEEecCCccccccccccccc
Confidence            9999999999998877776655

>3emw_A SPRY domain-containing SOCS box protein 2; apoptosis nucleus, apoptosis, UBL conjugation pathwayc, CL transcription regulation, transcription, phosphoprotein; 1.80A {Homo sapiens} PDB: 3ek9_A

Probab=99.75  E-value=3e-19  Score=152.89  Aligned_cols=102  Identities=48%  Similarity=0.809  Sum_probs=94.9

Q ss_pred             CCCchhhhhccCCCCCcccccccccCCCCCCCCeEEecCCeeEEEEcccccccchhccccccccceeEEEEEecCCCCcc
Q psy8040         169 QRPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGT  248 (272)
Q Consensus       169 ~~p~RlD~LL~~PP~~~~~q~~waWNp~DrS~NI~LK~ddklTfHRHPVaQSTDaIRGKkGls~G~H~WEI~W~~r~rGT  248 (272)
                      ..|.||+.||+|||.....+..++|||+++++++.|++| +.+|+++|+.|++++|||+.||+.|+|||||+|...+.|+
T Consensus        22 ~~~~~L~~~l~~~~~~~~~~~~~tlDp~ta~~~L~lSed-~~~v~~~~~~~~~~~Vl~~~~~~sGrhYWEV~v~~~~~g~  100 (217)
T 3emw_A           22 SMPEGLEELLSAPPPDLGAQRRHGWNPKDCSENIEVKEG-GLYFERRPVAQSTDGARGKRGYSRGLHAWEISWPLEQRGT  100 (217)
T ss_dssp             GCCTTHHHHHHSCCCCHHHHHHTSEEEEEECTTEEEEGG-GTEEEECCBSSCEEEEEESCCBSSSEEEEEEECCGGGCTT
T ss_pred             hcCHHHHHhhcCCCcccccccceEeCcccCCCCEEECCC-CeEEEECccCCCCCEEEeCCCccCccEEEEEEEcccCCCC
Confidence            568899999999999999999999999999999999997 4799999999999999999999999999999999878899


Q ss_pred             eEEEeeecCCccccCCCcccccc
Q psy8040         249 HAVVGVGTIDAPLHSVGYQIIRF  271 (272)
Q Consensus       249 hAMVGVgTkeApLh~~GY~sLl~  271 (272)
                      ...|||+++.++++..|+..+++
T Consensus       101 ~~~vGv~~~~~~r~~~g~~~~lG  123 (217)
T 3emw_A          101 HAVVGVATALAPLQTDHYAALLG  123 (217)
T ss_dssp             CCEEEEECTTSCCEESSSCCCTT
T ss_pred             ceeEEEEcCccccccCCcccccc
Confidence            99999999999998888877665

>3toj_A SET1/ASH2 histone methyltransferase complex subun; transcription, SPRY domain, prote binding, histone methylation, RBBP5, DPY-30, nuclear; 2.07A {Homo sapiens}

Probab=99.17  E-value=1.2e-11  Score=105.17  Aligned_cols=72  Identities=21%  Similarity=0.225  Sum_probs=65.0

Q ss_pred             ccccccCCCCCCCCeEEecCCeeEEEEcccccccchhccccccccceeEEEEEecCCCCcceEEEeeecCCccccC
Q psy8040         188 QVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHS  263 (272)
Q Consensus       188 q~~waWNp~DrS~NI~LK~ddklTfHRHPVaQSTDaIRGKkGls~G~H~WEI~W~~r~rGThAMVGVgTkeApLh~  263 (272)
                      ...+.||++|+++++.|++|+ ++++.   .++..+|||+.|+..|+|||||++...+.++++.||++|+.+++++
T Consensus        10 ~~~v~ld~~d~~~~l~ls~d~-l~v~~---~~~~~~vra~~~v~~G~~YfEV~v~~~~~~~~~~iG~a~~~~~~~~   81 (213)
T 3toj_A           10 YERVLLALHDRAPQLKISDDR-LTVVG---EKGYSMVRASHGVRKGAWYFEITVDEMPPDTAARLGWSQPLGNLQA   81 (213)
T ss_dssp             ECCCCEEEEEECTTSEECTTS-SEEEC---CSSCEEEEESCCBSSEEEEEEEEEEECCTTCEEEEEEECTTSCTTS
T ss_pred             CCeEEechhhCCCCEEEcCCC-cEEEe---CCceeEEEeCCCccCCeEEEEEEEeecCCCceEEEEeccCCccccc
Confidence            457999999999999999875 89987   4578899999999999999999999877799999999999999874

>2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens}

Probab=98.91  E-value=6e-10  Score=92.06  Aligned_cols=67  Identities=19%  Similarity=0.229  Sum_probs=56.6

Q ss_pred             CCCCCCCCeEEecCCeeEEEEcccccccchhccccccccceeEEEEEecCCCCcceEEEeeecCCccccC
Q psy8040         194 NPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHS  263 (272)
Q Consensus       194 Np~DrS~NI~LK~ddklTfHRHPVaQSTDaIRGKkGls~G~H~WEI~W~~r~rGThAMVGVgTkeApLh~  263 (272)
                      +++||+.+|.+.++ ++++|.+  .+++++||++.|+.+|.|||||++.....++++.||++|+.++|+.
T Consensus         3 s~~dr~~~l~~~~d-~l~~~~~--~~~~~~vra~~p~~~g~~YfEv~i~~~~~~~~~~IG~a~~~~~~~~   69 (171)
T 2yyo_A            3 SGSSGFKHILVDGD-TLSYHGN--SGEVGCYVASRPLTKDSNYFEVSIVDSGVRGTIAVGLVPQYYSLDH   69 (171)
T ss_dssp             ---CEEESEEEETT-EEEECCC--SSCCEEEECSSCCCSSSCEEEEEEEEETTTCCCEEEEECTTCCTTS
T ss_pred             CcccCcceEEEcCC-EEEEeCC--CCceeEEEECCCCCCCCEEEEEEEEECCCCcEEEEEecCCCCCCcc
Confidence            45899999988654 6887665  3689999999999999999999999878889999999999999864

>2wl1_A Pyrin, marenostrin; amyloidosis, polymorphism, cytoskeleton, actin-binding inflammatory response, metal-binding, signaling protein; 1.35A {Homo sapiens}

Probab=98.40  E-value=4.2e-07  Score=76.68  Aligned_cols=67  Identities=19%  Similarity=0.205  Sum_probs=54.6

Q ss_pred             ccccCCCCCCCCeEEecCCeeEEEEccccc----------ccchhccccccccceeEEEEEecCCCCcceEEEeeecCCc
Q psy8040         190 KHAWNPEDRSLNIFVKDDDKLTFHRHPVAQ----------STDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDA  259 (272)
Q Consensus       190 ~waWNp~DrS~NI~LK~ddklTfHRHPVaQ----------STDaIRGKkGls~G~H~WEI~W~~r~rGThAMVGVgTkeA  259 (272)
                      ..++||+-..+++.|++|+ .++.+....|          ...+|-|+.+|+.|+|||||+|..   .+...|||+.+.+
T Consensus        14 ~~tLDp~TA~~~L~lSed~-~~v~~~~~~q~~p~~p~RF~~~~~VLg~~~fssGrHYWEVev~~---~~~w~vGV~~~s~   89 (191)
T 2wl1_A           14 NVILDAETAYPNLIFSDDL-KSVRLGNKWERLPDGPQRFDSCIIVLGSPSFLSGRRYWEVEVGD---KTAWILGACKTSI   89 (191)
T ss_dssp             CCEECTTTSCTTEEECTTS-CEEEECCTTCCCCCCTTSCSSSCCEEEECCBCSSEEEEEEECTT---CSCEEEEEEETTC
T ss_pred             eeEECCccCCCceEECCCC-cEEEECCcCCCCCCCcccccccccccCcccccCCCEEEEEEeCC---CCEEEEEEeeCCc
Confidence            6788999999999999886 5676654333          245899999999999999999984   5788999998765


Q ss_pred             c
Q psy8040         260 P  260 (272)
Q Consensus       260 p  260 (272)
                      +
T Consensus        90 ~   90 (191)
T 2wl1_A           90 S   90 (191)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2fbe_A Predicted: similar to RET finger protein-like 1; dimer, jellyroll beta-sandwich fold, unknown function; 2.52A {Homo sapiens} SCOP: b.29.1.22

Probab=98.39  E-value=4.6e-07  Score=77.45  Aligned_cols=67  Identities=22%  Similarity=0.378  Sum_probs=54.6

Q ss_pred             ccccCCCCCCCCeEEecCCeeEEEEccccc----------ccchhccccccccceeEEEEEecCCCCcceEEEeeecCCc
Q psy8040         190 KHAWNPEDRSLNIFVKDDDKLTFHRHPVAQ----------STDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDA  259 (272)
Q Consensus       190 ~waWNp~DrS~NI~LK~ddklTfHRHPVaQ----------STDaIRGKkGls~G~H~WEI~W~~r~rGThAMVGVgTkeA  259 (272)
                      ..++|++-..+++.|++|+ .++.+....|          ...+|-|+.+|+.|+|||||+|..   .+...|||+.+.+
T Consensus        11 ~~tLDp~TA~~~L~lSed~-~~v~~~~~~q~~p~~peRF~~~~~VLg~~~fsSGrHYWEVev~~---~~~w~vGV~~~si   86 (201)
T 2fbe_A           11 DMTFDVDTANNYLIISEDL-RSFRSGDLSQNRKEQAERFDTALCVLGTPRFTSGRHYWEVDVGT---SQVWDVGVCKESV   86 (201)
T ss_dssp             CCCEETTTCCTTEEECTTS-SEEEECSSCCCCCCCTTSCSSSCEEEESCCBSSSEEEEEEECTT---CSEEEEEEEETTS
T ss_pred             eEEECcccCCCceEECCCC-cEEEECCccCCCCCCccceeeccceecCccccCCceEEEEEeCC---CCEEEEEEeeCcc
Confidence            6788999999999999886 5676654433          246899999999999999999984   4778999998765


Q ss_pred             c
Q psy8040         260 P  260 (272)
Q Consensus       260 p  260 (272)
                      +
T Consensus        87 ~   87 (201)
T 2fbe_A           87 N   87 (201)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3kb5_A Tripartite motif-containing protein 72; B30.2, gustavus, SPRY, TRIM21, TRIM72, PRY, high resolution, Mg53; 1.50A {Homo sapiens}

Probab=98.16  E-value=4e-06  Score=70.70  Aligned_cols=68  Identities=16%  Similarity=0.277  Sum_probs=53.5

Q ss_pred             cccccCCCCCCCCeEEecCCeeEEEEcccc-c----------ccchhccccccccceeEEEEEecCCCCcceEEEeeecC
Q psy8040         189 VKHAWNPEDRSLNIFVKDDDKLTFHRHPVA-Q----------STDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTI  257 (272)
Q Consensus       189 ~~waWNp~DrS~NI~LK~ddklTfHRHPVa-Q----------STDaIRGKkGls~G~H~WEI~W~~r~rGThAMVGVgTk  257 (272)
                      .+.+.||+-..+++.|++|+ .++.+-... |          ...+|-|+.+|+.|+|||||+|..   .+.-.|||+.+
T Consensus        12 ~~vtLDp~TA~~~L~lSed~-~~v~~~~~~~q~~p~~p~RF~~~~~VLg~~~fssGrhYWEVev~~---~~~W~lGV~~~   87 (193)
T 3kb5_A           12 EELTFDPSSAHPSLVVSSSG-RRVECSEQKAPPAGEDPRQFDKAVAVVAHQQLSEGEHYWEVDVGD---KPRWALGVIAA   87 (193)
T ss_dssp             CCCCBCTTTSCTTEEEETTT-TEEEECCSCCCCCCSCTTSCSSSCEEEBSCCBCSSEEEEEEECTT---CSSEEEEEEET
T ss_pred             ccEEECCCCCCCCEEECCCC-CEEEECCcCCCCCCCCccccccccEEccCCcccCCCEEEEEEeCc---CceEEEEEeeC
Confidence            35788999999999999886 466654433 2          235799999999999999999984   46789999987


Q ss_pred             Ccc
Q psy8040         258 DAP  260 (272)
Q Consensus       258 eAp  260 (272)
                      .++
T Consensus        88 s~~   90 (193)
T 3kb5_A           88 EAP   90 (193)
T ss_dssp             TSC
T ss_pred             CcC
Confidence            653

>2vok_A 52 kDa RO protein; polymorphism, immune system, metal-binding, tripartite motif (TRIM) protein, SPRY systemic lupus erythematosus, zinc, B30.2; 1.30A {Mus musculus} PDB: 2vol_B* 2iwg_B*

Probab=98.07  E-value=4.9e-06  Score=70.43  Aligned_cols=66  Identities=15%  Similarity=0.167  Sum_probs=50.5

Q ss_pred             cccCCCCCCCCeEEecCCeeEEEEccccc----------ccchhccccccccceeEEEEEecCCCCcceEEEeeecCCcc
Q psy8040         191 HAWNPEDRSLNIFVKDDDKLTFHRHPVAQ----------STDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAP  260 (272)
Q Consensus       191 waWNp~DrS~NI~LK~ddklTfHRHPVaQ----------STDaIRGKkGls~G~H~WEI~W~~r~rGThAMVGVgTkeAp  260 (272)
                      .+-||+-..+++.|++|+ .++.+....|          ...+|-|+.+|+.|+|||||+|..   ++.-.|||+.+.++
T Consensus        11 vtLDp~TA~~~L~lSed~-~~v~~~~~~q~~p~~peRF~~~~~VLg~~~fsSGrHYWEVev~~---~~~w~vGV~~~si~   86 (188)
T 2vok_A           11 ITLDRNTANSWLIISKDR-RQVRMGDTHQNVSDNKERFSNYPMVLGAQRFSSGKMYWEVDVTQ---KEAWDLGVCRDSVQ   86 (188)
T ss_dssp             CCBCGGGSCTTEEECTTS-CEEEECSSCCCCCCCTTSCCSSSEEEBSCCBSSSEEEEEEECTT---CSCEEEEEEETTCC
T ss_pred             eEECCccCCCCeEECCCC-CEEEECCccCCCCCCccceeeeccccccCcccCCCeEEEEEecC---CceEEEEEeeCCcC
Confidence            345777788899999876 4555543222          235899999999999999999984   67789999987654

>3uv9_A TRIM5alpha, tripartite motif-containing protein 5; domain SWAP, antiretroviral, HIV capsid, ligase; 1.55A {Macaca mulatta}

Probab=98.05  E-value=6.7e-06  Score=69.09  Aligned_cols=60  Identities=20%  Similarity=0.273  Sum_probs=44.9

Q ss_pred             ccCCCCCCCCeEEecCCeeEEEEcccccccchhccccccccceeEEEEEecCCCCcceEEEeeecCCcc
Q psy8040         192 AWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAP  260 (272)
Q Consensus       192 aWNp~DrS~NI~LK~ddklTfHRHPVaQSTDaIRGKkGls~G~H~WEI~W~~r~rGThAMVGVgTkeAp  260 (272)
                      +=||+--. ++.|++|+ .+|-+.+    ..+|-|+.+|+.|+|||||+|..   ++.-.|||+...+.
T Consensus        15 TLDp~TA~-~l~lSed~-r~Vr~~~----~~~VLG~~~ftsGrHYWEVeV~~---~~~W~vGV~~~~~~   74 (186)
T 3uv9_A           15 TLATNNIS-HAVIAEDK-RQVSSRA----GTGVLGSQSITSGKHYWEVDVSK---KSAWILGVCAGFQS   74 (186)
T ss_dssp             CCCCCSSC-CCEECTTS-SCEECCC----SSCEECSSCBCSSEEEEEEECTT---CSCEEEEEESCSTT
T ss_pred             EeCCCCcC-CceECCCC-CEEeecC----CCcCcCCCCCCCCCEEEEEEEcC---CCcEEEEEEEEEec
Confidence            34566655 47788875 4554443    34699999999999999999974   67789999976544

>4b3n_A Maltose-binding periplasmic protein, tripartite motif-containing protein 5; sugar binding protein-ligase complex; HET: MAL MES; 3.30A {Escherichia coli} PDB: 2lm3_A

Probab=96.76  E-value=0.0014  Score=61.88  Aligned_cols=63  Identities=21%  Similarity=0.295  Sum_probs=43.4

Q ss_pred             ccccCCCCCCCCeEEecCCeeEEEEc---------------cccc---ccchhccccccccceeEEEEEecCCCCcceEE
Q psy8040         190 KHAWNPEDRSLNIFVKDDDKLTFHRH---------------PVAQ---STDCIRGRVGFTKGFHIWEVHWSARQRGTHAV  251 (272)
Q Consensus       190 ~waWNp~DrS~NI~LK~ddklTfHRH---------------PVaQ---STDaIRGKkGls~G~H~WEI~W~~r~rGThAM  251 (272)
                      +.+=||+--+ ++.|++|+ ..|++-               |...   ...+|=|+.||+.|+|||||++..   .|.=.
T Consensus       411 ~vtldp~ta~-~l~~s~d~-r~v~~~~~~~~~~~p~~~~~~~~~~rF~~~~~VLg~~~f~sGrhyWEV~v~~---~~~w~  485 (602)
T 4b3n_A          411 DVTLATNNIS-HAVIAEDK-RQVSSRNPQIMYQAPGTLFTFPSLTNFNYCTGVLGSQSITSGKHYWEVDVSK---KSAWI  485 (602)
T ss_dssp             CCCEECCSCC-SCEECTTS-SEEECCCC--------------------CCCCEEESSCBSSSEEEEEEECTT---CSCEE
T ss_pred             EEEeCCCCCC-ceeEecCC-CEEEECCccccccCCCccCCCCCcccCCCCCEeccCCCCCCEEEEEEEEECC---CeeEE
Confidence            4455777666 57788875 456431               1111   346799999999999999999874   56668


Q ss_pred             EeeecC
Q psy8040         252 VGVGTI  257 (272)
Q Consensus       252 VGVgTk  257 (272)
                      |||+..
T Consensus       486 ~Gv~~~  491 (602)
T 4b3n_A          486 LGVCAG  491 (602)
T ss_dssp             EEEECC
T ss_pred             EEEeec
Confidence            999753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	272
d2fnja1	217	b.29.1.22 (A:35-251) LD34464p {Fruit fly (Drosophi	2e-38
d2afja1	213	b.29.1.22 (A:12-224) SPRY domain-containing SOCS b	7e-31

>d2fnja1 b.29.1.22 (A:35-251) LD34464p {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 217

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: SPRY domain
domain: LD34464p
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score =  132 bits (332), Expect = 2e-38
 Identities = 79/98 (80%), Positives = 89/98 (90%)

Query: 170 RPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVG 229
           +P R+DI+LDMPPASR+ Q+KH+WN EDRSLNIFVK+DDKLTFHRHPVAQSTDCIRG+VG
Sbjct: 3   KPARIDILLDMPPASRDLQLKHSWNSEDRSLNIFVKEDDKLTFHRHPVAQSTDCIRGKVG 62

Query: 230 FTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQ 267
            TKG HIWE++W  RQRGTHAVVGV T DAPLHSVGYQ
Sbjct: 63  LTKGLHIWEIYWPTRQRGTHAVVGVCTADAPLHSVGYQ 100

>d2afja1 b.29.1.22 (A:12-224) SPRY domain-containing SOCS box protein 2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 213

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: SPRY domain
domain: SPRY domain-containing SOCS box protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  112 bits (280), Expect = 7e-31
 Identities = 50/107 (46%), Positives = 62/107 (57%), Gaps = 3/107 (2%)

Query: 163 PRELAH--QRPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQS 220
            + L      P  L+ +L  PP     Q  H WNP+D S NI VK+   L F R PVAQS
Sbjct: 5   SQALYSDFSPPEGLEELLSAPPPDLVAQRHHGWNPKDCSENIDVKEGG-LCFERRPVAQS 63

Query: 221 TDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQ 267
           TD +RG+ G+++G H WE+ W   QRGTHAVVGV T  APL +  Y 
Sbjct: 64  TDGVRGKRGYSRGLHAWEISWPLEQRGTHAVVGVATALAPLQADHYA 110

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	272
d2fnja1	217	LD34464p {Fruit fly (Drosophila melanogaster) [Tax	99.93
d2afja1	213	SPRY domain-containing SOCS box protein 2 {Mouse (	99.83
d2iwgb1	179	52 kDa Ro protein {Human (Homo sapiens) [TaxId: 96	98.02
d2fbea1	188	Similar to Ret finger protein-like 1 {Human (Homo	97.89

>d2fnja1 b.29.1.22 (A:35-251) LD34464p {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: SPRY domain
domain: LD34464p
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.93  E-value=2e-27  Score=198.62  Aligned_cols=102  Identities=77%  Similarity=1.307  Sum_probs=98.2

Q ss_pred             CCchhhhhccCCCCCcccccccccCCCCCCCCeEEecCCeeEEEEcccccccchhccccccccceeEEEEEecCCCCcce
Q psy8040         170 RPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTH  249 (272)
Q Consensus       170 ~p~RlD~LL~~PP~~~~~q~~waWNp~DrS~NI~LK~ddklTfHRHPVaQSTDaIRGKkGls~G~H~WEI~W~~r~rGTh  249 (272)
                      +|.|+|+|+++||...+.++.|+||++|++.|+.|++|+.+++|++|++++|++|||++|++.|+|||||+|...+.||+
T Consensus         3 ~p~~~d~~~~~pp~~~~~~~~~~wn~~~~~~~~~ls~~~~~~~~~~~~~~~~~~vrgt~g~ssGk~YWEV~v~~~~~~~~   82 (217)
T d2fnja1           3 KPARIDILLDMPPASRDLQLKHSWNSEDRSLNIFVKEDDKLTFHRHPVAQSTDCIRGKVGLTKGLHIWEIYWPTRQRGTH   82 (217)
T ss_dssp             CCHHHHHHHHSCCCCHHHHHHTSEEEEEECTTEEEETTEEEEEEECCCTTEEEEEEESCCBCSSEEEEEEECCGGGCTTC
T ss_pred             CccccCeeecCCCCCccccccccCChhcCCCCEEEeCCCceEEEeCCccccCCeEEEcccccCCcEEEEEEEecCCCCCe
Confidence            68899999999999999999999999999999999999889999999999999999999999999999999998889999


Q ss_pred             EEEeeecCCccccCCCcccccc
Q psy8040         250 AVVGVGTIDAPLHSVGYQIIRF  271 (272)
Q Consensus       250 AMVGVgTkeApLh~~GY~sLl~  271 (272)
                      ++|||+|++++|+..+|.++++
T Consensus        83 ~~IGV~~~~~~~~~~~~~~~~G  104 (217)
T d2fnja1          83 AVVGVCTADAPLHSVGYQSLVG  104 (217)
T ss_dssp             CEEEEECTTSCSEEESSCCCTT
T ss_pred             eEEEEEecccCcccCCcccccc
Confidence            9999999999999999988875

>d2afja1 b.29.1.22 (A:12-224) SPRY domain-containing SOCS box protein 2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: SPRY domain
domain: SPRY domain-containing SOCS box protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.83  E-value=2.7e-21  Score=160.07  Aligned_cols=102  Identities=48%  Similarity=0.819  Sum_probs=95.7

Q ss_pred             CCCchhhhhccCCCCCcccccccccCCCCCCCCeEEecCCeeEEEEcccccccchhccccccccceeEEEEEecCCCCcc
Q psy8040         169 QRPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGT  248 (272)
Q Consensus       169 ~~p~RlD~LL~~PP~~~~~q~~waWNp~DrS~NI~LK~ddklTfHRHPVaQSTDaIRGKkGls~G~H~WEI~W~~r~rGT  248 (272)
                      .+|.|.|.|++.||.....+..|+|||.|++.++.|++++ ++++.++...++++|||++|++.|+|||||++.....|+
T Consensus        13 ~~~~~~d~~~dtp~~~~~~~~~~~wnp~~~~~~i~ls~g~-l~~~~~~~~~~~~~v~gt~~~ssGk~YwEv~i~~~~~~~   91 (213)
T d2afja1          13 SPPEGLEELLSAPPPDLVAQRHHGWNPKDCSENIDVKEGG-LCFERRPVAQSTDGVRGKRGYSRGLHAWEISWPLEQRGT   91 (213)
T ss_dssp             CCCSSSHHHHSSCCTTSSHHHHHSSCCSSSCCSSEEETTT-TEEECSSCTTTSSSEEECCCCCCSEEEEEEECCCCSSSC
T ss_pred             CCCcccCeeeeCCCCCccccccccCChhhcCCCeEEeCCC-eEEEeCCccCccccEEECccccCCcEEEEEEEeccCCcc
Confidence            7889999999999999999999999999999999999875 899999988899999999999999999999999888999


Q ss_pred             eEEEeeecCCccccCCCcccccc
Q psy8040         249 HAVVGVGTIDAPLHSVGYQIIRF  271 (272)
Q Consensus       249 hAMVGVgTkeApLh~~GY~sLl~  271 (272)
                      +++|||+|++++++..+|..+++
T Consensus        92 ~~~iGv~~~~~~~~~~~~~~~~G  114 (213)
T d2afja1          92 HAVVGVATALAPLQADHYAALLG  114 (213)
T ss_dssp             CCEEEEEESSCCCSSCSSSCCCC
T ss_pred             eEEEeEeecccCccccCcccccc
Confidence            99999999999999988877654

>d2iwgb1 b.29.1.22 (B:4-182) 52 kDa Ro protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: SPRY domain
domain: 52 kDa Ro protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=4.9e-06  Score=67.44  Aligned_cols=65  Identities=20%  Similarity=0.270  Sum_probs=49.7

Q ss_pred             ccCCCCCCCCeEEecCCeeEEEEccccc----------ccchhccccccccceeEEEEEecCCCCcceEEEeeecCCcc
Q psy8040         192 AWNPEDRSLNIFVKDDDKLTFHRHPVAQ----------STDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAP  260 (272)
Q Consensus       192 aWNp~DrS~NI~LK~ddklTfHRHPVaQ----------STDaIRGKkGls~G~H~WEI~W~~r~rGThAMVGVgTkeAp  260 (272)
                      +-||+-.++++.|++|+ .++.+-...|          .-.+|-|+.+|+.|+|||||++..   ++.-.|||+...++
T Consensus         4 TLDp~TAh~~L~lS~d~-~~V~~~~~~~~~p~~p~RF~~~~~VLg~~~f~sG~HYWEVeV~~---~~~w~vGV~~~s~~   78 (179)
T d2iwgb1           4 TLDPDTANPWLILSEDR-RQVRLGDTQQSIPGNEERFDSYPMVLGAQHFHSGKHYWEVDVTG---KEAWDLGVCRDSVR   78 (179)
T ss_dssp             CBCTTTCCTTEEECTTS-CEEEECSSCCCCCCCTTSCCSSSCEEBSCCBSSSEEEEEEECTT---CSCEEEEEEETTCC
T ss_pred             EECCCcCCCCEEEcCCC-CEEEECCcCcCCCCCcccccccccccccccccCCCEEEEEEEee---CCeEEEEEEcCccC
Confidence            45788889999999876 4565533222          235799999999999999999863   66778999987654

>d2fbea1 b.29.1.22 (A:1-188) Similar to Ret finger protein-like 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: SPRY domain
domain: Similar to Ret finger protein-like 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=9.1e-06  Score=66.25  Aligned_cols=67  Identities=22%  Similarity=0.378  Sum_probs=51.9

Q ss_pred             ccccCCCCCCCCeEEecCCeeEEEEccccc----------ccchhccccccccceeEEEEEecCCCCcceEEEeeecCCc
Q psy8040         190 KHAWNPEDRSLNIFVKDDDKLTFHRHPVAQ----------STDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDA  259 (272)
Q Consensus       190 ~waWNp~DrS~NI~LK~ddklTfHRHPVaQ----------STDaIRGKkGls~G~H~WEI~W~~r~rGThAMVGVgTkeA  259 (272)
                      +.+-|++-.++++.|++|+ .+|.+-...|          ...+|-|+.+|+.|+|||||++..   .+.-.|||+...+
T Consensus        11 dvtLDp~TAh~~L~lS~d~-~~V~~~~~~~~~p~~p~rF~~~~~VLg~~~fssGrHYWEV~V~~---~~~w~vGV~~~sv   86 (188)
T d2fbea1          11 DMTFDVDTANNYLIISEDL-RSFRSGDLSQNRKEQAERFDTALCVLGTPRFTSGRHYWEVDVGT---SQVWDVGVCKESV   86 (188)
T ss_dssp             CCCEETTTCCTTEEECTTS-SEEEECSSCCCCCCCTTSCSSSCEEEESCCBSSSEEEEEEECTT---CSEEEEEEEETTS
T ss_pred             eeEcCCCCCCCCEEEccCC-cEEEECCcCCCCCCCcccccceeeccccccccCCCEEEEEEeee---CCeEEEEEEeCCc
Confidence            5567888899999999876 4665543333          224699999999999999999873   5577899999877


Q ss_pred             c
Q psy8040         260 P  260 (272)
Q Consensus       260 p  260 (272)
                      +
T Consensus        87 ~   87 (188)
T d2fbea1          87 N   87 (188)
T ss_dssp             C
T ss_pred             C
Confidence            5