Psyllid ID: psy8046

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210----
Protein Sequence
MEPLQMGKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGEFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYKTLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKISTKLFTHCDSYVLCPKNNFWQIDNLKNHFNKELQLQ
Secondary Structure (PSIPRED)
cccccccccccccccEEEEEEEEEccccccccccEEEEEEEEccccccccEEccccccEEEEEEEEEEEEEEEEEEEccccccEEEEEEEEcccccccccccccccEEEEEEEEEEEccccHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHcHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccEEEEEEEccccccHHHHEEEEEEEEccccccccEEEEcccEEEEEcccEEEEEEEEEEEEccccccEEEEEEEEEccccccccccccccEEEEEEEEEEcccccHHHHHHHHcccccccccccccccccccccccccccHHHccccHHcccHHHHHHHHcccccEEEccccHHHccHHHHHHHHHHHHHccHHHccc
Coil and Loop (DISEMBL)
meplqmgkkresdghthewkVYIKPYYKEDLAKYIKKVSFKLhesypvnvriltkppfeisetgwgEFELVIKIYfhdpnerpvTLYHMLKLFKTKDAACDATNSLLYNEFYEeiifneptltmyktlsstvphtpasasLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDkistklfthcdsyvlcpknnfwqidnLKNHFNKELQLQ
Flexible Loop (DISEMBL)
meplqmgkkresdghthewkVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGEFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYKTLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKISTKLFTHCDSYVLCPKNNFWQIDNLKNHFNKELQLQ
Low Complexity Region (SEG)
MEPLQMGKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGEFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYKTLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKISTKLFTHCDSYVLCPKNNFWQIDNLKNHFNKELQLQ
Disordered region (IsUnstruct)
****************HEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGEFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYKTLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKISTKLFTHCDSYVLCPKNNFWQIDNLKNHF*******
Disordered Region (DISOPRED)
***************THEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGEFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLT***********************************************IGVYKDKISTKLFTH*****************************
Disordered Region (DISEMBL)
***************THEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGEFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYKTLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKISTKLFTHCDSYVLCPKNNFWQIDNLKNHFNKELQLQ
Disordered Region (DISPRO)
**************HTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGEFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYKTLSSTVPHT*A****************ASTLRGIIEAKKRLEREIGVYKDKISTKLFTHCDSYVLCPKNNFWQIDNLKNHFN******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEPLQMGKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGEFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYKTLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKISTKLFTHCDSYVLCPKNNFWQIDNLKNHFNKELQLQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	214	2.2.26 [Sep-21-2011]
O95619	227	YEATS domain-containing p	yes	N/A	0.864	0.814	0.446	4e-37
Q9CR11	227	YEATS domain-containing p	yes	N/A	0.864	0.814	0.446	4e-37
Q4WPM8	252	Protein AF-9 homolog OS=N	yes	N/A	0.542	0.460	0.462	9e-26
Q5BC71	275	Protein AF-9 homolog OS=E	yes	N/A	0.556	0.432	0.450	3e-25
Q6FXM4	221	Protein AF-9 homolog OS=C	yes	N/A	0.817	0.791	0.331	3e-23
Q755P0	208	Protein AF-9 homolog OS=A	yes	N/A	0.771	0.793	0.345	8e-23
Q6CIV8	220	Protein AF-9 homolog OS=K	yes	N/A	0.771	0.75	0.35	1e-22
Q10319	217	Protein AF-9 homolog OS=S	yes	N/A	0.574	0.566	0.396	4e-22
P53930	226	Protein AF-9 homolog OS=S	yes	N/A	0.752	0.712	0.329	3e-21
Q4I7S1	268	Protein AF-9 homolog OS=G	yes	N/A	0.546	0.436	0.404	3e-19

>sp|O95619|YETS4_HUMAN YEATS domain-containing protein 4 OS=Homo sapiens GN=YEATS4 PE=1 SV=1

 Score =  154 bits (389), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 87/195 (44%), Positives = 126/195 (64%), Gaps = 10/195 (5%)

Query: 7   GKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWG 66
           GKKRE DGHTH+W VY+KPY  ED++ Y+KK+ FKLHESY   +R++TKPP+EI+ETGWG
Sbjct: 35  GKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESYGNPLRVVTKPPYEITETGWG 94

Query: 67  EFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYK 126
           EFE++IKI+F DPNERPVTLYH+LKLF++   A     +++ +EFY+E+IF +PT  M +
Sbjct: 95  EFEIIIKIFFIDPNERPVTLYHLLKLFQSDTNAMLGKKTVV-SEFYDEMIFQDPTAMMQQ 153

Query: 127 TLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKISTKLFTHC 186
            L+++   T  +      H   F   +  T   +  AKK+   EI   K+++     T  
Sbjct: 154 LLTTSRQLTLGAYK----HETEFAELEVKTREKLEAAKKKTSFEIAELKERLKASRET-- 207

Query: 187 DSYVLCPKNNFWQID 201
              + C KN   +++
Sbjct: 208 ---INCLKNEIRKLE 219

Component of the NuA4 histone acetyltransferase (HAT) complex which is involved in transcriptional activation of select genes principally by acetylation of nucleosomal histones H4 and H2A. This modification may both alter nucleosome - DNA interactions and promote interaction of the modified histones with other proteins which positively regulate transcription. This complex may be required for the activation of transcriptional programs associated with oncogene and proto-oncogene mediated growth induction, tumor suppressor mediated growth arrest and replicative senescence, apoptosis, and DNA repair. NuA4 may also play a direct role in DNA repair when recruited to sites of DNA damage.
Homo sapiens (taxid: 9606)

>sp|Q9CR11|YETS4_MOUSE YEATS domain-containing protein 4 OS=Mus musculus GN=Yeats4 PE=2 SV=1

 Score =  154 bits (389), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 87/195 (44%), Positives = 126/195 (64%), Gaps = 10/195 (5%)

Query: 7   GKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWG 66
           GKKRE DGHTH+W VY+KPY  ED++ Y+KK+ FKLHESY   +R++TKPP+EI+ETGWG
Sbjct: 35  GKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESYGNPLRVVTKPPYEITETGWG 94

Query: 67  EFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYK 126
           EFE++IKI+F DPNERPVTLYH+LKLF++   A     +++ +EFY+E+IF +PT  M +
Sbjct: 95  EFEIIIKIFFIDPNERPVTLYHLLKLFQSDTNAMLGKKTVV-SEFYDEMIFQDPTAMMQQ 153

Query: 127 TLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKISTKLFTHC 186
            L+++   T  +      H   F   +  T   +  AKK+   EI   K+++     T  
Sbjct: 154 LLTTSRQLTLGAYK----HETEFAELEVKTREKLEAAKKKTSFEIAELKERLKASRET-- 207

Query: 187 DSYVLCPKNNFWQID 201
              + C KN   +++
Sbjct: 208 ---INCLKNEIRKLE 219

Component of the NuA4 histone acetyltransferase (HAT) complex which is involved in transcriptional activation of select genes principally by acetylation of nucleosomal histones H4 and H2A. This modification may both alter nucleosome - DNA interactions and promote interaction of the modified histones with other proteins which positively regulate transcription. This complex may be required for the activation of transcriptional programs associated with oncogene and proto-oncogene mediated growth induction, tumor suppressor mediated growth arrest and replicative senescence, apoptosis, and DNA repair. NuA4 may also play a direct role in DNA repair when recruited to sites of DNA damage.

Mus musculus (taxid: 10090)

>sp|Q4WPM8|AF9_ASPFU Protein AF-9 homolog OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=yaf9 PE=3 SV=2

 Score =  116 bits (291), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 55/119 (46%), Positives = 79/119 (66%), Gaps = 3/119 (2%)

Query: 15  HTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGEFELVIKI 74
           HTH+W+V++K    ED++ ++KKV FKLHE+Y  NVR + +PPFE++ETGWGEFE+ IK+
Sbjct: 41  HTHQWRVFVKGVNDEDISYWLKKVQFKLHETYAQNVRTIEQPPFEVTETGWGEFEIQIKL 100

Query: 75  YF-HDPNERPVTLYHMLKL--FKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYKTLSS 130
           YF  +  E+P TL+H LKL  F            ++ ++ YEEI+FNEP    Y  L+ 
Sbjct: 101 YFVPESGEKPQTLWHSLKLHPFGPGAEVKKERREVVISQNYEEIVFNEPMEPFYDLLTG 159

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

>sp|Q5BC71|AF9_EMENI Protein AF-9 homolog OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=yaf9 PE=3 SV=1

 Score =  114 bits (286), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 3/122 (2%)

Query: 12  SDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGEFELV 71
           S  HTH+W+VY++    ED++ +IKKV FKLHE+Y  NVR +  PP+E++ETGWGEFE+ 
Sbjct: 38  SSDHTHQWRVYVRGVNGEDISYWIKKVQFKLHETYVQNVRTVEHPPYEVTETGWGEFEIQ 97

Query: 72  IKIYF-HDPNERPVTLYHMLKL--FKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYKTL 128
           IKIYF  +  E+P TL+H LKL  +            ++ ++ YEE++FNEP    Y  L
Sbjct: 98  IKIYFVPESMEKPQTLWHSLKLHPYGPDAEGKKERREVVVSQNYEEVVFNEPVEQFYDYL 157

Query: 129 SS 130
           + 
Sbjct: 158 TG 159

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321)

>sp|Q6FXM4|AF9_CANGA Protein AF-9 homolog OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=YAF9 PE=3 SV=1

 Score =  108 bits (270), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 108/196 (55%), Gaps = 21/196 (10%)

Query: 5   QMGKKRESDG---HTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEIS 61
           ++G+ R  +    HTH W ++++    +D++ +IKKV FKLHE+YP  VR +  PPFE++
Sbjct: 26  KIGENRPPNAPSEHTHLWTIFVRSPTGDDISYFIKKVVFKLHETYPNPVRTIEAPPFELT 85

Query: 62  ETGWGEFELVIKIYF-HDPNERPVTLYHMLKL-------------FKTKDAACDATNSLL 107
           ETGWGEF++ IKIYF  + NE+ +  YH L+L              K ++     T+  +
Sbjct: 86  ETGWGEFDINIKIYFVEESNEKFINFYHRLRLHPYVNVNPPMSTEVKKEETGNATTSDEI 145

Query: 108 YNEFYEEIIFNEPTLTMYKTLSSTVPH-TPASASLIAAHSVNFESAKASTLRGIIEAKKR 166
            + FY+EI+FNEP    +K L S   +  P++ +     S   E  + + ++    A   
Sbjct: 146 SSIFYDEIVFNEPYEDFFKILVSKPGNLLPSNKTEDCLFSRQLEQDELTRIKM---ASSN 202

Query: 167 LEREIGVYKDKISTKL 182
           +++EI +YK K+   L
Sbjct: 203 VDKEIEIYKKKLEDTL 218

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593)

>sp|Q755P0|AF9_ASHGO Protein AF-9 homolog OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=YAF9 PE=3 SV=1

 Score =  107 bits (266), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 98/171 (57%), Gaps = 6/171 (3%)

Query: 15  HTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGEFELVIKI 74
           HTH W ++++    ED++ +IKKV FKLHE+YP  VR++  PPFE++ETGWGEFE+ +K+
Sbjct: 39  HTHMWTIFVRGPQGEDISYFIKKVVFKLHETYPNPVRVVDAPPFELTETGWGEFEINVKV 98

Query: 75  YFHD-PNERPVTLYHMLKLFK-TKDAACDATNSLLYNEFYEEIIFNEPTLTMY-KTLSST 131
           +F D  NE+ +  YH L+L   T++    +    + + FY+EI+FNEP    + K +   
Sbjct: 99  HFVDEANEKMLNFYHHLRLHPYTEEDGRRSDGDEVSSVFYDEIVFNEPNEAFFAKMIEQP 158

Query: 132 VPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKISTKL 182
               P++ +     S+  E  +   ++  I    +++ EI   K K+   L
Sbjct: 159 GNLLPSNKTPDCVFSLQLEQEEIDRIQQGI---GKVDEEIEQLKQKLEQDL 206

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811)

>sp|Q6CIV8|AF9_KLULA Protein AF-9 homolog OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=YAF9 PE=3 SV=1

 Score =  106 bits (265), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 102/180 (56%), Gaps = 15/180 (8%)

Query: 15  HTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGEFELVIKI 74
           HTH W ++++    ED++ +IKKV FKLHE+YP  VR++  PPFE++ETGWGEFE+ IKI
Sbjct: 40  HTHLWTIFVRDPRGEDISYFIKKVVFKLHETYPNPVRVIEAPPFELTETGWGEFEINIKI 99

Query: 75  YFHD-PNERPVTLYHMLKLF-----KTKDAACDATNSLLYNE-----FYEEIIFNEPTLT 123
           YF D  NE+ +  YH L+L      +TK+       S +  +     +++EI+FNEP   
Sbjct: 100 YFADVSNEKMLNFYHHLRLHPYINPETKEIERSNDESEVPEDEVKAVYFDEIVFNEPVEQ 159

Query: 124 MYKTLSSTVPHT-PASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKISTKL 182
            ++ L S   +  P++ +     S   E  +   +       K++++EI VY+ K+   +
Sbjct: 160 FFQLLMSKPGNLFPSNKTPTCVFSRQLEQEEIDRIHI---GTKKIDKEIKVYEQKLKEAM 216

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590)

>sp|Q10319|AF9_SCHPO Protein AF-9 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yaf9 PE=3 SV=1

 Score =  104 bits (260), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 50/126 (39%), Positives = 82/126 (65%), Gaps = 3/126 (2%)

Query: 8   KKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGE 67
           K++    HTH W+++++    ED++K+++KV FKLH++Y    R +  PPFE+ ETGWGE
Sbjct: 30  KEKAPTDHTHTWRIFVEGVDGEDISKWVRKVVFKLHDTYNNPTRTIESPPFEVIETGWGE 89

Query: 68  FELVIKIYFH-DPNERPVTLYHMLKL--FKTKDAACDATNSLLYNEFYEEIIFNEPTLTM 124
           F+++++I+F  + +E+ +T YH LKL  +  +     A+  L+ +  YEEI+FNEP    
Sbjct: 90  FDIMVRIFFAPEAHEKALTFYHHLKLHPYGPRMEEMKASGGLVESVQYEEIVFNEPFEYT 149

Query: 125 YKTLSS 130
           YK LS 
Sbjct: 150 YKLLSQ 155

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P53930|AF9_YEAST Protein AF-9 homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YAF9 PE=1 SV=1

 Score =  101 bits (252), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 98/179 (54%), Gaps = 18/179 (10%)

Query: 15  HTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGEFELVIKI 74
           HTH W ++++    ED++ +IKKV FKLH++YP  VR +  PPFE++ETGWGEF++ IK+
Sbjct: 39  HTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPNPVRSIEAPPFELTETGWGEFDINIKV 98

Query: 75  YF-HDPNERPVTLYHMLKLFKTKDAACDATNSLLYNE-------------FYEEIIFNEP 120
           YF  + NE+ +  YH L+L    +   ++ N    N              +++EI+FNEP
Sbjct: 99  YFVEEANEKVLNFYHRLRLHPYANPVPNSDNGNEQNTTDHNSKDAEVSSVYFDEIVFNEP 158

Query: 121 TLTMYKTLSSTVPH-TPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKI 178
               +K L S   +  P++ +    +S   E  +   +   IE   ++++EI   K K+
Sbjct: 159 NEEFFKILMSRPGNLLPSNKTDDCVYSKQLEQEEIDRIEIGIE---KVDKEIDELKQKL 214

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q4I7S1|AF9_GIBZE Protein AF-9 homolog OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=YAF9 PE=3 SV=1

 Score = 95.1 bits (235), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/126 (40%), Positives = 78/126 (61%), Gaps = 9/126 (7%)

Query: 13  DGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRIL-TKP--PFEISETGWGEFE 69
           D HTH W+V++K     D+  ++++V FKLHES P  VR++  +P  PF + ETGWGEF+
Sbjct: 41  DNHTHSWQVFVKGLDDTDITYWLRRVQFKLHESIPNYVRMVEGEPGKPFTVEETGWGEFD 100

Query: 70  LVIKIYF-HDPNERPVTLYHMLKLF-----KTKDAACDATNSLLYNEFYEEIIFNEPTLT 123
           + IK+Y+ +D  E+P TLYH L+L      + +  A  ++N  + +  YEE +FNEP   
Sbjct: 101 ITIKLYYVNDSGEKPQTLYHYLRLHPYGRNEEEKQAMISSNGEICSWSYEEQLFNEPYEV 160

Query: 124 MYKTLS 129
            Y  L+
Sbjct: 161 FYNLLT 166

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) (taxid: 229533)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
345484995	227	PREDICTED: YEATS domain-containing prote	0.789	0.744	0.540	3e-48
350406570	228	PREDICTED: YEATS domain-containing prote	0.785	0.736	0.549	5e-48
383850006	228	PREDICTED: YEATS domain-containing prote	0.785	0.736	0.543	7e-48
380015918	230	PREDICTED: YEATS domain-containing prote	0.785	0.730	0.549	8e-48
328791396	230	PREDICTED: YEATS domain-containing prote	0.785	0.730	0.549	1e-47
322798631	227	hypothetical protein SINV_09145 [Solenop	0.785	0.740	0.543	3e-47
157132764	230	YEATS domain containing protein 4 [Aedes	0.785	0.730	0.519	3e-47
332017875	227	YEATS domain-containing protein 4 [Acrom	0.785	0.740	0.543	5e-47
91090888	227	PREDICTED: similar to YEATS domain conta	0.780	0.735	0.554	6e-47
321476368	225	hypothetical protein DAPPUDRAFT_187412 [	0.789	0.751	0.505	1e-46

>gi|345484995|ref|XP_001605429.2| PREDICTED: YEATS domain-containing protein 4 [Nasonia vitripennis]

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 94/174 (54%), Positives = 126/174 (72%), Gaps = 5/174 (2%)

Query: 6   MGKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGW 65
            GKKRE DGHTH+W VY+KPY+ ED++ Y+KKV FKLHESY    RI+TKPP+E++ETGW
Sbjct: 33  FGKKREEDGHTHQWTVYVKPYHNEDMSAYVKKVHFKLHESYNNPNRIVTKPPYELTETGW 92

Query: 66  GEFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMY 125
           GEFE+VIK+YFHDPNERPVT+YH+LKLF+T         +L+ +EFY+EIIF +P+  M 
Sbjct: 93  GEFEIVIKVYFHDPNERPVTIYHILKLFQTPPEVQIGKKNLV-SEFYDEIIFQDPSALMQ 151

Query: 126 KTLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKIS 179
             LSST P T      I  H  +FE+ K  TL+ I +A+ ++  E+  YK+K++
Sbjct: 152 HLLSSTKPLTTG----IWKHDTDFEAKKEQTLKAITDARTKIRNEVAEYKEKLT 201

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350406570|ref|XP_003487813.1| PREDICTED: YEATS domain-containing protein 4-like [Bombus impatiens]

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 95/173 (54%), Positives = 128/173 (73%), Gaps = 5/173 (2%)

Query: 7   GKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWG 66
           GKKRE DGHTH+W VY+KPY+ ED++ Y+KKV FKLHESY    RI+TK P+E+SETGWG
Sbjct: 35  GKKREEDGHTHQWTVYVKPYHNEDMSTYVKKVHFKLHESYNNPNRIMTKAPYELSETGWG 94

Query: 67  EFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYK 126
           EFE+VIKIYFHDPNERPVT+YH+LKLF+T         SL+ +EFYEEI+F +PT  M  
Sbjct: 95  EFEIVIKIYFHDPNERPVTIYHILKLFQTTPEIQLGKKSLV-SEFYEEIVFQDPTALMQH 153

Query: 127 TLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKIS 179
            L+S+ P T      +  H+ +FE+ K ST++ IIEA+ ++  E+  +K+K++
Sbjct: 154 LLNSSKPTTFG----VWRHNTDFEAKKESTMKAIIEARNKIRLEVIEFKEKLT 202

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383850006|ref|XP_003700619.1| PREDICTED: YEATS domain-containing protein 4-like [Megachile rotundata]

 Score =  196 bits (497), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 94/173 (54%), Positives = 128/173 (73%), Gaps = 5/173 (2%)

Query: 7   GKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWG 66
           GKKRE DGHTH+W VY+KPY+ ED++ Y+KKV FKLHESY    RI+TKPP+E++ETGWG
Sbjct: 35  GKKREEDGHTHQWTVYVKPYHNEDMSTYVKKVHFKLHESYNNPNRIMTKPPYELTETGWG 94

Query: 67  EFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYK 126
           EFE+VIKIYFHDPNERPVT+YH+LKLF+T         SL+ +EFYEEI+F +PT  M  
Sbjct: 95  EFEIVIKIYFHDPNERPVTIYHILKLFQTTPEIQLGKKSLV-SEFYEEIVFQDPTALMQH 153

Query: 127 TLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKIS 179
            L+S+ P T      +  H+ +FE+ K ST++ I+EA+ ++  E+   K+K++
Sbjct: 154 LLNSSRPITLG----VWRHNTDFEAKKESTMKAIMEARNKIRLEVIDLKEKVT 202

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380015918|ref|XP_003691941.1| PREDICTED: YEATS domain-containing protein 4-like [Apis florea]

 Score =  195 bits (496), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 95/173 (54%), Positives = 127/173 (73%), Gaps = 5/173 (2%)

Query: 7   GKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWG 66
           GKKRE DGHTH+W VY+KPY+ ED++ Y+KKV FKLHESY    RI+TKPP+E++ETGWG
Sbjct: 37  GKKREEDGHTHQWTVYVKPYHNEDMSTYVKKVHFKLHESYNNPNRIMTKPPYELTETGWG 96

Query: 67  EFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYK 126
           EFE+VIKIYFHDPNERPVT+YH+LKLF+T         SL+ +EFYEEI+F +PT  M  
Sbjct: 97  EFEIVIKIYFHDPNERPVTIYHILKLFQTTPEIQLGKKSLV-SEFYEEIVFQDPTALMQH 155

Query: 127 TLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKIS 179
            L+S  P T  +      H+ +FE+ K ST++ IIEA+ ++  E+   K+K++
Sbjct: 156 LLNSNRPITLGAWR----HNTDFEAKKESTMKAIIEARNKIRLEVIDLKEKLT 204

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328791396|ref|XP_396159.2| PREDICTED: YEATS domain-containing protein 4 [Apis mellifera]

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 95/173 (54%), Positives = 126/173 (72%), Gaps = 5/173 (2%)

Query: 7   GKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWG 66
           GKKRE DGHTH+W VY+KPY  ED++ Y+KKV FKLHESY    RI+TKPP+E++ETGWG
Sbjct: 37  GKKREEDGHTHQWTVYVKPYLNEDMSTYVKKVHFKLHESYNNPNRIMTKPPYELTETGWG 96

Query: 67  EFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYK 126
           EFE+VIKIYFHDPNERPVT+YH+LKLF+T         SL+ +EFYEEI+F +PT  M  
Sbjct: 97  EFEIVIKIYFHDPNERPVTIYHILKLFQTTPEIQLGKKSLV-SEFYEEIVFQDPTALMQH 155

Query: 127 TLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKIS 179
            L+S  P T  +      H+ +FE+ K ST++ IIEA+ ++  E+   K+K++
Sbjct: 156 LLNSNRPITLGAWR----HNTDFEAKKESTMKAIIEARNKIRLEVIDLKEKLT 204

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322798631|gb|EFZ20235.1| hypothetical protein SINV_09145 [Solenopsis invicta]

 Score =  194 bits (492), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 94/173 (54%), Positives = 127/173 (73%), Gaps = 5/173 (2%)

Query: 7   GKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWG 66
           GKKRE DGHTH+W VY+KPY  ED++ Y+KKV FKLHESY    RI+TKPP+E++ETGWG
Sbjct: 34  GKKREEDGHTHQWTVYVKPYNNEDMSSYVKKVHFKLHESYNNPNRIVTKPPYELTETGWG 93

Query: 67  EFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYK 126
           EFE+VIKIYFHDPNERPVT+YH+LKLF++         SL+ +EFYEEI+F +PT  M  
Sbjct: 94  EFEIVIKIYFHDPNERPVTVYHILKLFQSTPELQLGKKSLV-SEFYEEIVFQDPTALMQH 152

Query: 127 TLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKIS 179
            LSS+ P T      +  H+ +FE+ K ST++ I+EA+ ++  E+   K+K++
Sbjct: 153 LLSSSRPMTLG----VWRHNTDFEALKESTMKDILEARNKIRLEVIDLKEKLT 201

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157132764|ref|XP_001662633.1| YEATS domain containing protein 4 [Aedes aegypti] gi|108871078|gb|EAT35303.1| AAEL012525-PA [Aedes aegypti]

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 92/177 (51%), Positives = 123/177 (69%), Gaps = 9/177 (5%)

Query: 7   GKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWG 66
           GKKRE DGHTH+W VY+KPY+ ED++ Y+KK+ FKLHESY    R++TKPPFE++ETGWG
Sbjct: 34  GKKREEDGHTHQWTVYVKPYHNEDMSTYVKKIHFKLHESYANPNRVVTKPPFEVTETGWG 93

Query: 67  EFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSL-----LYNEFYEEIIFNEPT 121
           EFE+VIKI+FHDP ERPVT+YH+LKLF++     +  N L     L +E YEEI+F EPT
Sbjct: 94  EFEIVIKIHFHDPTERPVTMYHILKLFQSPIVDGEVANQLEGKKVLVSEQYEEIVFQEPT 153

Query: 122 LTMYKTLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKI 178
             M + L++  P T  S      H  +FE  K  +L  II+ K +++ EI + KDK+
Sbjct: 154 QLMQQLLTNVQPVTGGSWK----HDTDFEEKKVQSLENIIDTKGKVKSEIALLKDKL 206

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332017875|gb|EGI58535.1| YEATS domain-containing protein 4 [Acromyrmex echinatior]

 Score =  193 bits (490), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 94/173 (54%), Positives = 127/173 (73%), Gaps = 5/173 (2%)

Query: 7   GKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWG 66
           GKKRE DGHTH+W VY+KPY  ED++ Y+KKV FKLHESY    RI+TKPP+E++ETGWG
Sbjct: 34  GKKREEDGHTHQWTVYVKPYNNEDMSTYVKKVHFKLHESYNNPNRIVTKPPYELTETGWG 93

Query: 67  EFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYK 126
           EFE+VIKIYFHDPNERPVT+YH+LKLF++         SL+ +EFYEEI+F +PT  M  
Sbjct: 94  EFEIVIKIYFHDPNERPVTVYHILKLFQSTPEIQLGKKSLV-SEFYEEIVFQDPTALMQH 152

Query: 127 TLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKIS 179
            LSS+ P T  +      H+ +FE+ K ST++ I+EA+ ++  E+   K+K++
Sbjct: 153 LLSSSRPMTLGAWR----HNTDFEALKESTMKDIMEARNKIRLEVIDLKEKLT 201

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91090888|ref|XP_973381.1| PREDICTED: similar to YEATS domain containing protein 4 [Tribolium castaneum] gi|270014003|gb|EFA10451.1| hypothetical protein TcasGA2_TC012697 [Tribolium castaneum]

 Score =  192 bits (489), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 97/175 (55%), Positives = 125/175 (71%), Gaps = 8/175 (4%)

Query: 7   GKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWG 66
           GKKRE DGHTH+W VY+KPY  ED++ Y+KKV FKLHESY    RI+ KPP+EISETGWG
Sbjct: 34  GKKREEDGHTHQWTVYVKPYNNEDISCYVKKVHFKLHESYANQNRIVVKPPYEISETGWG 93

Query: 67  EFELVIKIYFHDPNERPVTLYHMLKLF---KTKDAACDATNSLLYNEFYEEIIFNEPTLT 123
           EFE+VIKI+FHDPNERPVT+YH+LKLF    T D   +    LL +E Y+EI+F +PT  
Sbjct: 94  EFEIVIKIHFHDPNERPVTMYHILKLFHSGGTMDIGMEQGKGLL-SESYDEIVFQDPTQL 152

Query: 124 MYKTLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKI 178
           M+  L++T   T A       H+ NFE  K  TL+ I EAK++++ EIGV K+++
Sbjct: 153 MHHLLTNTKQLTLARWE----HNTNFEEKKEKTLKSITEAKQKVKAEIGVLKNRL 203

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321476368|gb|EFX87329.1| hypothetical protein DAPPUDRAFT_187412 [Daphnia pulex]

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 88/174 (50%), Positives = 124/174 (71%), Gaps = 5/174 (2%)

Query: 6   MGKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGW 65
            GKKRE DGHTH+W VY++P+  ED++ Y+KK++FKLH+SY    R+LTKPP+E++ETGW
Sbjct: 31  FGKKREEDGHTHQWTVYVRPFENEDMSTYVKKINFKLHDSYANQNRVLTKPPYEVTETGW 90

Query: 66  GEFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMY 125
           GEFE+VIKIYF DPNERPVT YH+LKLF+           ++ +EFYEEI+F EPT+ M+
Sbjct: 91  GEFEIVIKIYFQDPNERPVTFYHILKLFQNSPEIVVGKKPVV-SEFYEEIVFQEPTVMMH 149

Query: 126 KTLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKIS 179
           + L++ +PH   S      H  +FE  K STL  I++AK +++ E+   KD++ 
Sbjct: 150 QLLTN-IPHLSTSP---VKHDADFEEKKVSTLDSIVKAKAKVKNELSELKDRLQ 199

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
FB|FBgn0031873	227	Gas41 "Gas41" [Drosophila mela	0.775	0.731	0.508	2.8e-43
ZFIN|ZDB-GENE-040718-252	226	yeats4 "YEATS domain containin	0.775	0.734	0.488	1.9e-42
UNIPROTKB|Q32LE1	227	YEATS4 "Uncharacterized protei	0.864	0.814	0.446	3.2e-42
UNIPROTKB|E2QSI2	227	YEATS4 "Uncharacterized protei	0.864	0.814	0.446	3.2e-42
UNIPROTKB|O95619	227	YEATS4 "YEATS domain-containin	0.864	0.814	0.446	3.2e-42
MGI|MGI:1927224	227	Yeats4 "YEATS domain containin	0.864	0.814	0.446	3.2e-42
UNIPROTKB|Q8UVS4	227	GAS41 "GAS41" [Gallus gallus (	0.817	0.770	0.469	4e-42
RGD|1305741	227	Yeats4 "YEATS domain containin	0.864	0.814	0.441	8.4e-42
UNIPROTKB|E1BU44	224	YEATS4 "Uncharacterized protei	0.831	0.794	0.467	1.6e-40
WB|WBGene00001585	211	gfl-1 [Caenorhabditis elegans	0.742	0.753	0.475	4.9e-37

FB|FBgn0031873 Gas41 "Gas41" [Drosophila melanogaster (taxid:7227)]

 Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
 Identities = 92/181 (50%), Positives = 123/181 (67%)

Query:     7 GKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWG 66
             GKKRE DGHTH+WKVY+KPY+ ED++ Y+KKV FKLHESY    RI+ KPP+EI+ETGWG
Sbjct:    31 GKKREEDGHTHQWKVYLKPYFNEDMSIYVKKVHFKLHESYANPNRIVVKPPYEITETGWG 90

Query:    67 EFELVIKIYFHDPNERPVTLYHMLKLFKTK--DAACDATNSL-----LYNEFYEEIIFNE 119
             EFE++IKIYF+D +ERPVT YH+LKLF++   D    ++ ++     L +E YEEI+F E
Sbjct:    91 EFEVIIKIYFNDQSERPVTCYHILKLFQSPVVDGELSSSTTMDTKKGLVSESYEEIVFQE 150

Query:   120 PT--LTMYKTLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDK 177
             PT  L  Y  LS        SA+ +  H  +FE  K  TL  I+  K++++ EI   KDK
Sbjct:   151 PTQILQHYLLLSEQ------SANGLLTHDTDFEEKKTKTLDNIVNVKQKVKGEIVTLKDK 204

Query:   178 I 178
             +
Sbjct:   205 L 205

GO:0005669 "transcription factor TFIID complex" evidence=ISS

GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0000123 "histone acetyltransferase complex" evidence=IPI

ZFIN|ZDB-GENE-040718-252 yeats4 "YEATS domain containing 4" [Danio rerio (taxid:7955)]

 Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 84/172 (48%), Positives = 117/172 (68%)

Query:     7 GKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWG 66
             GKKRE DGHTH+W VY+KPY  ED++ Y+KK+ FKLHESY   +R++TKPP+EI+ETGWG
Sbjct:    35 GKKREDDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESYGNPLRVVTKPPYEITETGWG 94

Query:    67 EFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYK 126
             EFE++IKI+F DPNERPVTLYH+LKLF++  +A       + +EFY+E+IF +PT  M +
Sbjct:    95 EFEIIIKIFFIDPNERPVTLYHLLKLFQSDSSAMP--KKTVVSEFYDEMIFQDPTAMMQQ 152

Query:   127 TLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKI 178
              L++T   T  +      H   F   +  T   +  AKK+   EI   K+++
Sbjct:   153 LLNTTRQLTLGAYK----HETEFAELELRTREKLESAKKKTSLEITELKERL 200

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|Q32LE1 YEATS4 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
 Identities = 87/195 (44%), Positives = 126/195 (64%)

Query:     7 GKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWG 66
             GKKRE DGHTH+W VY+KPY  ED++ Y+KK+ FKLHESY   +R++TKPP+EI+ETGWG
Sbjct:    35 GKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESYGNPLRVVTKPPYEITETGWG 94

Query:    67 EFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYK 126
             EFE++IKI+F DPNERPVTLYH+LKLF++   A     +++ +EFY+E+IF +PT  M +
Sbjct:    95 EFEIIIKIFFIDPNERPVTLYHLLKLFQSDTNAMLGKKTVV-SEFYDEMIFQDPTAMMQQ 153

Query:   127 TLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKISTKLFTHC 186
              L+++   T  +      H   F   +  T   +  AKK+   EI   K+++     T  
Sbjct:   154 LLTTSRQLTLGAYK----HETEFAELEVKTREKLEAAKKKTSFEIAELKERLKASRET-- 207

Query:   187 DSYVLCPKNNFWQID 201
                + C KN   +++
Sbjct:   208 ---INCLKNEIRKLE 219

GO:0043968 "histone H2A acetylation" evidence=IEA

GO:0043967 "histone H4 acetylation" evidence=IEA

GO:0035267 "NuA4 histone acetyltransferase complex" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|E2QSI2 YEATS4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
 Identities = 87/195 (44%), Positives = 126/195 (64%)

Query:     7 GKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWG 66
             GKKRE DGHTH+W VY+KPY  ED++ Y+KK+ FKLHESY   +R++TKPP+EI+ETGWG
Sbjct:    35 GKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESYGNPLRVVTKPPYEITETGWG 94

Query:    67 EFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYK 126
             EFE++IKI+F DPNERPVTLYH+LKLF++   A     +++ +EFY+E+IF +PT  M +
Sbjct:    95 EFEIIIKIFFIDPNERPVTLYHLLKLFQSDTNAMLGKKTVV-SEFYDEMIFQDPTAMMQQ 153

Query:   127 TLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKISTKLFTHC 186
              L+++   T  +      H   F   +  T   +  AKK+   EI   K+++     T  
Sbjct:   154 LLTTSRQLTLGAYK----HETEFAELEVKTREKLEAAKKKTSFEIAELKERLKASRET-- 207

Query:   187 DSYVLCPKNNFWQID 201
                + C KN   +++
Sbjct:   208 ---INCLKNEIRKLE 219

GO:0043968 "histone H2A acetylation" evidence=IEA

GO:0043967 "histone H4 acetylation" evidence=IEA

GO:0035267 "NuA4 histone acetyltransferase complex" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|O95619 YEATS4 "YEATS domain-containing protein 4" [Homo sapiens (taxid:9606)]

 Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
 Identities = 87/195 (44%), Positives = 126/195 (64%)

Query:     7 GKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWG 66
             GKKRE DGHTH+W VY+KPY  ED++ Y+KK+ FKLHESY   +R++TKPP+EI+ETGWG
Sbjct:    35 GKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESYGNPLRVVTKPPYEITETGWG 94

Query:    67 EFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYK 126
             EFE++IKI+F DPNERPVTLYH+LKLF++   A     +++ +EFY+E+IF +PT  M +
Sbjct:    95 EFEIIIKIFFIDPNERPVTLYHLLKLFQSDTNAMLGKKTVV-SEFYDEMIFQDPTAMMQQ 153

Query:   127 TLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKISTKLFTHC 186
              L+++   T  +      H   F   +  T   +  AKK+   EI   K+++     T  
Sbjct:   154 LLTTSRQLTLGAYK----HETEFAELEVKTREKLEAAKKKTSFEIAELKERLKASRET-- 207

Query:   187 DSYVLCPKNNFWQID 201
                + C KN   +++
Sbjct:   208 ---INCLKNEIRKLE 219

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0040008 "regulation of growth" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IPI

GO:0005654 "nucleoplasm" evidence=IDA

GO:0007067 "mitosis" evidence=NAS

GO:0016363 "nuclear matrix" evidence=NAS

GO:0005200 "structural constituent of cytoskeleton" evidence=NAS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=NAS

GO:0035267 "NuA4 histone acetyltransferase complex" evidence=IDA

GO:0043968 "histone H2A acetylation" evidence=IDA

GO:0043967 "histone H4 acetylation" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=TAS

GO:0003677 "DNA binding" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

MGI|MGI:1927224 Yeats4 "YEATS domain containing 4" [Mus musculus (taxid:10090)]

 Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
 Identities = 87/195 (44%), Positives = 126/195 (64%)

Query:     7 GKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWG 66
             GKKRE DGHTH+W VY+KPY  ED++ Y+KK+ FKLHESY   +R++TKPP+EI+ETGWG
Sbjct:    35 GKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESYGNPLRVVTKPPYEITETGWG 94

Query:    67 EFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYK 126
             EFE++IKI+F DPNERPVTLYH+LKLF++   A     +++ +EFY+E+IF +PT  M +
Sbjct:    95 EFEIIIKIFFIDPNERPVTLYHLLKLFQSDTNAMLGKKTVV-SEFYDEMIFQDPTAMMQQ 153

Query:   127 TLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKISTKLFTHC 186
              L+++   T  +      H   F   +  T   +  AKK+   EI   K+++     T  
Sbjct:   154 LLTTSRQLTLGAYK----HETEFAELEVKTREKLEAAKKKTSFEIAELKERLKASRET-- 207

Query:   187 DSYVLCPKNNFWQID 201
                + C KN   +++
Sbjct:   208 ---INCLKNEIRKLE 219

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=ISO

GO:0005654 "nucleoplasm" evidence=ISO;IDA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=ISO

GO:0016568 "chromatin modification" evidence=IEA

GO:0035267 "NuA4 histone acetyltransferase complex" evidence=ISO

GO:0040008 "regulation of growth" evidence=IEA

GO:0043967 "histone H4 acetylation" evidence=ISO

GO:0043968 "histone H2A acetylation" evidence=ISO

UNIPROTKB|Q8UVS4 GAS41 "GAS41" [Gallus gallus (taxid:9031)]

 Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
 Identities = 85/181 (46%), Positives = 121/181 (66%)

Query:     7 GKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWG 66
             GKKRE DGHTH+W VY+KPY  ED++ Y+KK+ FKLHESY   +R++TKPP+EI+ETGWG
Sbjct:    35 GKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESYGNPLRVVTKPPYEITETGWG 94

Query:    67 EFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYK 126
             EFE++IKI+F DPNERPVTLYH+LKLF++   A     +++ +EFY+E+IF +PT  M +
Sbjct:    95 EFEIIIKIFFIDPNERPVTLYHLLKLFQSDTNAILGKKTVV-SEFYDEMIFQDPTAMMQQ 153

Query:   127 TLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKISTKLFT-H 185
              L+++   T  +      H   F   +  T   +  AKK+   EI   K+++     T +
Sbjct:   154 LLTTSRQLTLGAYK----HETEFADLEVKTREKLEAAKKKTSFEIAELKERLKASRETIN 209

Query:   186 C 186
             C
Sbjct:   210 C 210

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA

GO:0035267 "NuA4 histone acetyltransferase complex" evidence=IEA

GO:0043967 "histone H4 acetylation" evidence=IEA

GO:0043968 "histone H2A acetylation" evidence=IEA

RGD|1305741 Yeats4 "YEATS domain containing 4" [Rattus norvegicus (taxid:10116)]

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 86/195 (44%), Positives = 125/195 (64%)

Query:     7 GKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWG 66
             GKKRE DGHTH+W VY+KPY  ED++ Y+KK+ FKLHESY   +R++TKPP+EI+ETGWG
Sbjct:    35 GKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESYGNPLRVVTKPPYEITETGWG 94

Query:    67 EFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYK 126
             EFE++IKI+F DPNERPVTLYH+LKLF++   A     +++ +EFY+E+IF +PT  M +
Sbjct:    95 EFEIIIKIFFIDPNERPVTLYHLLKLFQSDTNAMLGKKTVV-SEFYDEMIFQDPTAMMQQ 153

Query:   127 TLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKISTKLFTHC 186
              L+++   T  +      H   F   +  T   +  AK +   EI   K+++     T  
Sbjct:   154 LLTTSRQLTLGAYK----HETEFAELEVKTREKLEAAKNKTSLEIAELKERLKASRET-- 207

Query:   187 DSYVLCPKNNFWQID 201
                + C KN   +++
Sbjct:   208 ---INCLKNEIRKLE 219

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005654 "nucleoplasm" evidence=ISO

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA;ISO

GO:0008150 "biological_process" evidence=ND

GO:0035267 "NuA4 histone acetyltransferase complex" evidence=IEA;ISO

GO:0043967 "histone H4 acetylation" evidence=IEA;ISO

GO:0043968 "histone H2A acetylation" evidence=IEA;ISO

UNIPROTKB|E1BU44 YEATS4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
 Identities = 85/182 (46%), Positives = 120/182 (65%)

Query:     7 GKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVR-ILTKPPFEISETGW 65
             GKKRE DGHTH+W VY+KPY  ED++ Y+KK+ FKLHESY   +R ++TKPP+EI+ETGW
Sbjct:    33 GKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESYGNPLRAVVTKPPYEITETGW 92

Query:    66 GEFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMY 125
             GEFE++IKI+F DPNERPVTLYH+LKLF++   A     +++ +EFY+E+IF +PT  M 
Sbjct:    93 GEFEIIIKIFFIDPNERPVTLYHLLKLFQSDTNAILGKKTVV-SEFYDEMIFQDPTAMMQ 151

Query:   126 KTLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIEAKKRLEREIGVYKDKISTKLFT- 184
             + L+++   T   A      S      +  T   +  AKK+   EI   K+++     T 
Sbjct:   152 QLLTTSRQLT-LGAYKHETESTTVADLEVKTREKLEAAKKKTSFEIAELKERLKASRETI 210

Query:   185 HC 186
             +C
Sbjct:   211 NC 212

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

WB|WBGene00001585 gfl-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
 Identities = 79/166 (47%), Positives = 110/166 (66%)

Query:     7 GKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWG 66
             G KR+SD HTH+W V++KPY  ED  K+I+KV FKLHESY V  R++ KPP+E++ETGWG
Sbjct:    27 GYKRDSDQHTHQWTVFLKPYLIEDPTKWIRKVQFKLHESYAVPYRVVEKPPYEVTETGWG 86

Query:    67 EFELVIKIYFHDPNERPVTLYHMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYK 126
             EFE+ I+IYF DPNE+P+T +H L+LF+       + N ++  EFY+EIIF EPT+ MYK
Sbjct:    87 EFEIQIRIYFVDPNEKPITAFHYLRLFQPT-IELPSGNQIVCMEFYDEIIFQEPTVQMYK 145

Query:   127 TLSSTVPHTPASASLIAAHSVNFESAKASTLRGIIE-AKKRLEREI 171
              L ++    P   + +     + E  K  T R + E A+K +  EI
Sbjct:   146 ALQASDGKRPDKQAFLN----DIEQVKTRT-RELGEVAQKEIAAEI 186

GO:0005634 "nucleus" evidence=IEA;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0016246 "RNA interference" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040027 "negative regulation of vulval development" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0003682 "chromatin binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6CIV8	AF9_KLULA	No assigned EC number	0.35	0.7710	0.75	yes	N/A
O95619	YETS4_HUMAN	No assigned EC number	0.4461	0.8644	0.8149	yes	N/A
Q6FXM4	AF9_CANGA	No assigned EC number	0.3316	0.8177	0.7918	yes	N/A
P53930	AF9_YEAST	No assigned EC number	0.3296	0.7523	0.7123	yes	N/A
Q9CR11	YETS4_MOUSE	No assigned EC number	0.4461	0.8644	0.8149	yes	N/A
Q755P0	AF9_ASHGO	No assigned EC number	0.3450	0.7710	0.7932	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	214
pfam03366	84	pfam03366, YEATS, YEATS family	2e-35
COG5033	225	COG5033, TFG3, Transcription initiation factor IIF	5e-24

>gnl|CDD|190614 pfam03366, YEATS, YEATS family

 Score =  119 bits (302), Expect = 2e-35
 Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 1/84 (1%)

Query: 16 THEWKVYIKPYYKE-DLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGEFELVIKI 74
          TH+W V+++    E DL+ +IKKV+FKLHES+P  VR +TKPPFE++ETGWGEFE+ IKI
Sbjct: 1  THKWTVFVRGLDNEGDLSYFIKKVTFKLHESFPNPVRTVTKPPFEVTETGWGEFEIPIKI 60

Query: 75 YFHDPNERPVTLYHMLKLFKTKDA 98
          YF D NE+PVT+ H LKL      
Sbjct: 61 YFVDSNEKPVTIQHDLKLHPEGYE 84

We have named this family the YEATS family, after `YNK7', `ENL', `AF-9', and `TFIIF small subunit'. This family also contains the GAS41 protein. All these proteins are thought to have a transcription stimulatory activity. Length = 84

>gnl|CDD|227366 COG5033, TFG3, Transcription initiation factor IIF, auxiliary subunit [Transcription]

 Score = 94.5 bits (235), Expect = 5e-24
 Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 20/133 (15%)

Query: 15  HTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGEFELVIKI 74
           HTH W V+++   KED+A  +KKV FKLH ++    R +  PPFEI ETGWGEF++ IKI
Sbjct: 34  HTHIWLVFVRAPGKEDIATIVKKVIFKLHPTFSNPTRTIESPPFEIKETGWGEFDIQIKI 93

Query: 75  YFHD-PNERPVTLYHMLKLFKTKDAACDATNSLLYN----------------EFYEEIIF 117
           +F +   E+ +  Y     F  +  A D    +  N                 +  E  F
Sbjct: 94  FFAEKAGEKTIHFYL---HFGDEPYAVDEPVDIPVNRPDLTSELSKSGEVESVYKREKRF 150

Query: 118 NEPTLTMYKTLSS 130
           NEP +   K L+ 
Sbjct: 151 NEPNIQALKLLNG 163

Length = 225

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	214
KOG3149|consensus	249		100.0
PF03366	84	YEATS: YEATS family; InterPro: IPR005033 Named the	100.0
COG5033	225	TFG3 Transcription initiation factor IIF, auxiliar	100.0

>KOG3149|consensus

Probab=100.00  E-value=2e-36  Score=267.12  Aligned_cols=181  Identities=35%  Similarity=0.558  Sum_probs=147.0

Q ss_pred             CCccccccCCCCCCeeeEEEEEecCCCcCcccceeeEEEEeCCCCCCceeeeecCCcEEEEeeEeeEEEEEEEEEeC-CC
Q psy8046           2 EPLQMGKKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGEFELVIKIYFHD-PN   80 (214)
Q Consensus         2 ~~~~lgkK~~~~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~nP~Rvv~~PPFeVtE~GWGEF~I~I~I~F~d-~~   80 (214)
                      +|+++|+ +.++++||.|+|||||.++||++.||+||+|+||+||+||+|+|++|||+|+|+|||+|+|.|+|||.| .+
T Consensus        23 ~a~~~~~-~~~~~~th~w~v~v~~~~~ed~~~~V~KV~f~LH~sf~~P~Rvv~~pPf~i~EtGwgeF~i~i~i~f~d~~~  101 (249)
T KOG3149|consen   23 RAAILGK-RLPDGFTHIWEVYVRGPGKEDISAFVDKVVFKLHESFPNPRRVVESPPFEITETGWGEFEIQIEIFFTDDAN  101 (249)
T ss_pred             cccccCC-CCCcccceeeEEEecCcCccccceeeeeeeeecccccccccccccCCCceEEeeccccceEEEEEEeccCCC
Confidence            5788888 667889999999999999999999999999999999999999999999999999999999999999996 78


Q ss_pred             CCcEEEEEeecccCCCcc--------------cccCCCCceeEEEEE-EEEecCCCHHHHHHHhcCCCCCCCchhh----
Q psy8046          81 ERPVTLYHMLKLFKTKDA--------------ACDATNSLLYNEFYE-EIIFNEPTLTMYKTLSSTVPHTPASASL----  141 (214)
Q Consensus        81 ekpv~i~H~L~L~~~~~~--------------~~~~~~~~v~se~yd-eIvF~nPte~f~~~L~~~~~~~~~~~~~----  141 (214)
                      ++++.++|.|.|+.++..              .....+.+|+++.|+ +++|++|++.++..+.+.+..+....+.    
T Consensus       102 ~~~v~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~r~~v~~~~~~~e~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (249)
T KOG3149|consen  102 EKKVTLYHDLKLHSYGAPPVPHEESTKKTFVNPTISLRIPVVREGVDVEIVFPDPTESTSIEASSRPVGPGSNLAAVTDL  181 (249)
T ss_pred             CceeeeeeeEEeeccCCCCccchhhhcccccccchhcccccccccccceeecCCCCcccccccCCCCCcCCccccccccc
Confidence            899999999999987421              113457799999999 9999999999999998775322111000    


Q ss_pred             -----------hhccC-----C---ChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy8046         142 -----------IAAHS-----V---NFESAKASTLRGIIEAKKRLEREIGVYKDKISTKLF  183 (214)
Q Consensus       142 -----------~~~~~-----~---~~~~~e~~el~~i~~a~~~v~~eI~~lk~~l~~~~~  183 (214)
                                 ..+..     +   .+.-.+..+.+++..+.+.++.++.++++++.....
T Consensus       182 ~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~  242 (249)
T KOG3149|consen  182 KQVKSKTLPSLLSKESSKDVKTEKSSERPNEIDEVDRLEKKIKELKKEINKVRKDIEKLEG  242 (249)
T ss_pred             cccccccCcccccccccccccccccccccccchhhhhhhhhhhhhhhHHHHHHHhhhhccc
Confidence                       00000     0   112235678899888899999999999998876653

>PF03366 YEATS: YEATS family; InterPro: IPR005033 Named the YEATS family, after `YNK7', `ENL', `AF-9', and `TFIIF small subunit', this family also contains the GAS41 protein

Probab=100.00  E-value=1.5e-36  Score=228.85  Aligned_cols=82  Identities=60%  Similarity=1.071  Sum_probs=70.1

Q ss_pred             eeeEEEEEecCCCcCcccceeeEEEEeCCCCCCceeeeecCCcEEEEeeEeeEEEEEEEEEeCC-CCCcEEEEEeecccC
Q psy8046          16 THEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGEFELVIKIYFHDP-NERPVTLYHMLKLFK   94 (214)
Q Consensus        16 tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~nP~Rvv~~PPFeVtE~GWGEF~I~I~I~F~d~-~ekpv~i~H~L~L~~   94 (214)
                      ||+|+||||+++++|++++|+||+|+|||||+||+|++++|||+|+|+|||||+|.|+|+|++. +++|+++.|+|+|++
T Consensus         1 th~W~v~Vr~~~~~d~~~~i~kV~f~LHpsF~~p~r~v~~pPFevte~GWGeF~i~I~i~f~~~~~~~~~~~~h~L~l~~   80 (84)
T PF03366_consen    1 THKWTVYVRGLDNEDLSYFIKKVTFKLHPSFPNPVRVVTKPPFEVTETGWGEFEIPIKIHFKDPSNEKPVTIQHDLKLHQ   80 (84)
T ss_dssp             -EEEEEEEEECCCT--TTTEEEEEEES-TTSSS-EEECSSTTEEEEEEESS--EEEEEEECCCGGCTCEEEEEEE--SSS
T ss_pred             CcEEEEEEEeCCCCCccceEEEEEEECCCCCCCCceEecCCCCEEEEeEeccEEEEEEEEEeCCCCCCcEEEEEEEEcCC
Confidence            7999999999999999999999999999999999999999999999999999999999999994 889999999999998


Q ss_pred             CCc
Q psy8046          95 TKD   97 (214)
Q Consensus        95 ~~~   97 (214)
                      +++
T Consensus        81 ~~~   83 (84)
T PF03366_consen   81 DGY   83 (84)
T ss_dssp             CEE
T ss_pred             CCC
Confidence            763

All these proteins are thought to have a transcription stimulatory activity.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3QRL_A 2L7E_A 3FK3_C 3RLS_A.

>COG5033 TFG3 Transcription initiation factor IIF, auxiliary subunit [Transcription]

Probab=100.00  E-value=7e-34  Score=245.23  Aligned_cols=188  Identities=29%  Similarity=0.427  Sum_probs=140.1

Q ss_pred             CCcccccc-CCCCCCeeeEEEEEecCCCcCcccceeeEEEEeCCCCCCceeeeecCCcEEEEeeEeeEEEEEEEEEeC-C
Q psy8046           2 EPLQMGKK-RESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGEFELVIKIYFHD-P   79 (214)
Q Consensus         2 ~~~~lgkK-~~~~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~nP~Rvv~~PPFeVtE~GWGEF~I~I~I~F~d-~   79 (214)
                      ||--+|.- +-+-.+||-|.|||||.++||++.||+||+|+|||||+||+|++++|||+|.|+|||||+|.|+|||.+ +
T Consensus        20 ea~~~~~e~~~P~r~th~w~v~v~~~g~E~~~~iv~KVifkLH~Tf~NP~Rti~~pPFeI~EtGWGEF~i~I~iff~~~a   99 (225)
T COG5033          20 EAKPLGNEERFPVRHTHIWLVFVRAPGKEDIATIVKKVIFKLHPTFSNPTRTIESPPFEIKETGWGEFDIQIKIFFAEKA   99 (225)
T ss_pred             ccccCCccccCCchhhEEEEEEEeCCCCcchhhhhheeeEEeccccCCCcccccCCCcEEEecccccceEEEEEEEecCC
Confidence            45556643 356679999999999999999999999999999999999999999999999999999999999999998 5


Q ss_pred             CCCcEEEEEeecccCCCcc-------------cccCCCCceeEEEEEEEEecCCCHHHHHHHhcCCCCCCCchhhhhccC
Q psy8046          80 NERPVTLYHMLKLFKTKDA-------------ACDATNSLLYNEFYEEIIFNEPTLTMYKTLSSTVPHTPASASLIAAHS  146 (214)
Q Consensus        80 ~ekpv~i~H~L~L~~~~~~-------------~~~~~~~~v~se~ydeIvF~nPte~f~~~L~~~~~~~~~~~~~~~~~~  146 (214)
                      +++.+..+|.+.++++...             ...+....|-++.+++++|++|....+++|+..+.. ++- .+....+
T Consensus       100 ge~~~~fyl~f~~~~Y~v~~~v~~~~~~~~l~~elsk~geve~~~~~~~~~nep~i~~~k~~~~~~~~-~a~-gl~~~~e  177 (225)
T COG5033         100 GEKTIHFYLHFGDEPYAVDEPVDIPVNRPDLTSELSKSGEVESVYKREKRFNEPNIQALKLLNGAKMK-LAI-GLHKLRE  177 (225)
T ss_pred             CceEeehhhhcccccccccccccccccccchhhhhhhcCcccceeeeeecccCchhHHHHhhhcCccc-ccc-cCccccc
Confidence            6655554444444433210             011223456678899999999999999999887631 111 0111223


Q ss_pred             CC--h-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccceeeecCC
Q psy8046         147 VN--F-ESAKASTLRGIIEAKKRLEREIGVYKDKISTKLFTHCDSYVLCPKN  195 (214)
Q Consensus       147 ~~--~-~~~e~~el~~i~~a~~~v~~eI~~lk~~l~~~~~~~~~~~~~~~~~  195 (214)
                      .|  | .|+++++.+++..+.+++...|+.++.......+    .+--|++|
T Consensus       178 dd~~~v~Ql~~d~~~~v~~~ie~~~~~id~y~~~~~~L~~----~~~~~~~~  225 (225)
T COG5033         178 DDLVFVVQLVQDPIMAVLNLIEKGEFKIDLYKLPSDLLHK----LESVKAKN  225 (225)
T ss_pred             ccceeeEecCcCHHHHHHhccccCceEeeehhCchhhhhh----ccccccCC
Confidence            33  4 5899999999999999999999988766554432    34445554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	214
3fk3_A	164	Structure Of The Yeats Domain, Yaf9 Length = 164		6e-22
3rls_A	175	Crystal Structure Of Yeast Af-9 Homolog Protein Yaf		8e-22
3qrl_A	140	Crystal Structure Of The Taf14 Yeats Domain Length		5e-04
2l7e_A	131	The Structure Of A Domain From Yeast Length = 131		6e-04

>pdb|3FK3|A Chain A, Structure Of The Yeats Domain, Yaf9 Length = 164

Iteration: 1
 Score =  100 bits (249), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 77/130 (59%), Gaps = 14/130 (10%)
Query: 15  HTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGEFELVIKI 74
           HTH W ++++    ED++ +IKKV FKLH++YP  VR +  PPFE++ETGWGEF++ IK+
Sbjct: 34  HTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPNPVRSIEAPPFELTETGWGEFDINIKV 93
Query: 75  YF-HDPNERPVTLYHMLKLFKTKDAACDATNSLLYNE-------------FYEEIIFNEP 120
           YF  + NE+ +  YH L+L    +   ++ N    N              +++EI+FNEP
Sbjct: 94  YFVEEANEKVLNFYHRLRLHPYANPVPNSDNGNEQNTTDHNSKDAEVSSVYFDEIVFNEP 153
Query: 121 TLTMYKTLSS 130
               +K L S
Sbjct: 154 NEEFFKILXS 163

>pdb|3RLS|A Chain A, Crystal Structure Of Yeast Af-9 Homolog Protein Yaf9 Length = 175

Iteration: 1
 Score =  100 bits (248), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 77/130 (59%), Gaps = 14/130 (10%)
Query: 15  HTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGEFELVIKI 74
           HTH W ++++    ED++ +IKKV FKLH++YP  VR +  PPFE++ETGWGEF++ IK+
Sbjct: 31  HTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPNPVRSIEAPPFELTETGWGEFDINIKV 90
Query: 75  YF-HDPNERPVTLYHMLKLFKTKDAACDATNSLLYNE-------------FYEEIIFNEP 120
           YF  + NE+ +  YH L+L    +   ++ N    N              +++EI+FNEP
Sbjct: 91  YFVEEANEKVLNFYHRLRLHPYANPVPNSDNGNEQNTTDHNSKDAEVSSVYFDEIVFNEP 150
Query: 121 TLTMYKTLSS 130
               +K L S
Sbjct: 151 NEEFFKILMS 160

>pdb|3QRL|A Chain A, Crystal Structure Of The Taf14 Yeats Domain Length = 140

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 28 KEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGEFELVIKIYF 76
          KE  A    KV + LH ++    R  T PPF I E GWG F L I ++ 
Sbjct: 47 KEIPATIFDKVIYHLHPTFANPNRTFTDPPFRIEEQGWGGFPLDISVFL 95

>pdb|2L7E|A Chain A, The Structure Of A Domain From Yeast Length = 131

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 28 KEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGEFELVIKIYF 76
          KE  A    KV + LH ++    R  T PPF I E GWG F L I ++ 
Sbjct: 44 KEIPATIFDKVIYHLHPTFANPNRTFTDPPFRIEEQGWGGFPLDISVFL 92

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	214
3rls_A	175	YAF9, protein AF-9 homolog; yeats domain, histone,	2e-36
3qrl_A	140	Transcription initiation factor TFIID subunit 14;	3e-29

>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A Length = 175

 Score =  124 bits (313), Expect = 2e-36
 Identities = 50/138 (36%), Positives = 77/138 (55%), Gaps = 14/138 (10%)

Query: 8   KKRESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGE 67
                  HTH W ++++    ED++ +IKKV FKLH++YP  VR +  PPFE++ETGWGE
Sbjct: 24  PPNAPAEHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPNPVRSIEAPPFELTETGWGE 83

Query: 68  FELVIKIYFHD-PNERPVTLYHMLKLFKTKDAACDATNSLLYN-------------EFYE 113
           F++ IK+YF +  NE+ +  YH L+L    +   ++ N    N              +++
Sbjct: 84  FDINIKVYFVEEANEKVLNFYHRLRLHPYANPVPNSDNGNEQNTTDHNSKDAEVSSVYFD 143

Query: 114 EIIFNEPTLTMYKTLSST 131
           EI+FNEP    +K L S 
Sbjct: 144 EIVFNEPNEEFFKILMSR 161

>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A Length = 140

 Score =  105 bits (263), Expect = 3e-29
 Identities = 24/92 (26%), Positives = 35/92 (38%), Gaps = 4/92 (4%)

Query: 8   KKRESDGHTHEWKVYIKPY---YKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETG 64
                +    +W + I       KE  A    KV + LH ++    R  T PPF I E G
Sbjct: 24  VPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFANPNRTFTDPPFRIEEQG 83

Query: 65  WGEFELVIKIYFHDPNERPVTLYHMLKLFKTK 96
           WG F L I ++  +       + H L   +  
Sbjct: 84  WGGFPLDISVFLLE-KAGERKIPHDLNFLQES 114

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	214
3rls_A	175	YAF9, protein AF-9 homolog; yeats domain, histone,	100.0
3qrl_A	140	Transcription initiation factor TFIID subunit 14;	100.0

>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A

Probab=100.00  E-value=3.5e-49  Score=331.39  Aligned_cols=137  Identities=37%  Similarity=0.760  Sum_probs=120.0

Q ss_pred             CCccccccC---CCCCCeeeEEEEEecCCCcCcccceeeEEEEeCCCCCCceeeeecCCcEEEEeeEeeEEEEEEEEEeC
Q psy8046           2 EPLQMGKKR---ESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPVNVRILTKPPFEISETGWGEFELVIKIYFHD   78 (214)
Q Consensus         2 ~~~~lgkK~---~~~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~nP~Rvv~~PPFeVtE~GWGEF~I~I~I~F~d   78 (214)
                      .|++||+++   .++++||+|+|||||.+++|+++||+||+|+|||||+||+|++++|||+|+|+|||||+|.|+|||++
T Consensus        15 ~a~~l~~~~~~~~~~~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~np~Rvv~~PPFevtE~GWGeF~i~I~i~F~~   94 (175)
T 3rls_A           15 TAKKMGSVKPPNAPAEHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPNPVRSIEAPPFELTETGWGEFDINIKVYFVE   94 (175)
T ss_dssp             EEEECCSCCCTTCCTTCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSSCEEEECSSSEEEEEEESSCCEEEEEEEECG
T ss_pred             eeEECCccccCCCCCCCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCCCcEEEeCCCCEEEEeEEeeEEEEEEEEEeC
Confidence            478999764   35789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             -CCCCcEEEEEeecccCCCccc-------------ccCCCCceeEEEEEEEEecCCCHHHHHHHhcCCCCCCCc
Q psy8046          79 -PNERPVTLYHMLKLFKTKDAA-------------CDATNSLLYNEFYEEIIFNEPTLTMYKTLSSTVPHTPAS  138 (214)
Q Consensus        79 -~~ekpv~i~H~L~L~~~~~~~-------------~~~~~~~v~se~ydeIvF~nPte~f~~~L~~~~~~~~~~  138 (214)
                       ++++|++|+|+|+|++.+...             +..++++|+||+||||||+||++.||++|+++++..+|+
T Consensus        95 ~~~ek~i~i~H~L~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~se~ydEivF~ePte~f~~~L~~~p~~~lp~  168 (175)
T 3rls_A           95 EANEKVLNFYHRLRLHPYANPVPNSDNGNEQNTTDHNSKDAEVSSVYFDEIVFNEPNEEFFKILMSRPGNLLPS  168 (175)
T ss_dssp             GGCCCCEEEEEECCCCC-----------------------CCEEEEEEEEEEESSCCHHHHHHHHHSTTCCSCS
T ss_pred             CCCCccEEEEEEEEecCCCCccccccccccccccccccCCCceEEEEeccEEEeCCCHHHHHHHHhCCCccCCC
Confidence             678999999999999876321             112478999999999999999999999999999987775

>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A

Probab=100.00  E-value=2.2e-37  Score=251.79  Aligned_cols=110  Identities=21%  Similarity=0.397  Sum_probs=99.3

Q ss_pred             CCCCCeeeEE--EEEecCCCcCcc-cceeeEEEEeCCCCCCceeeeecCCcEEEEeeEeeEEEEEEEEEeCCCCCcEEEE
Q psy8046          11 ESDGHTHEWK--VYIKPYYKEDLA-KYIKKVSFKLHESYPVNVRILTKPPFEISETGWGEFELVIKIYFHDPNERPVTLY   87 (214)
Q Consensus        11 ~~~~~tH~Wt--VyVr~~~~edls-~~IkKV~F~LHpSF~nP~Rvv~~PPFeVtE~GWGEF~I~I~I~F~d~~ekpv~i~   87 (214)
                      .++.++|+|+  |||||.+++|++ +||+||+|+|||||+||+|++++|||+|+|+|||||+|.|+|||++.+ ++++|.
T Consensus        27 ~eg~~~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~np~r~v~~pPF~v~e~GWGeF~i~I~i~f~~~~-~~~~i~  105 (140)
T 3qrl_A           27 VENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFANPNRTFTDPPFRIEEQGWGGFPLDISVFLLEKA-GERKIP  105 (140)
T ss_dssp             BTTBCCEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSSSCEEEECSTTCCEEEEESSCCCEEEEEEEGGGT-EEEEEE
T ss_pred             CCCCcccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCCCCeEEEcCCCcEEEEEEeeeEEEEEEEEEecCC-CcEEEE
Confidence            3445679999  999999988885 899999999999999999999999999999999999999999999854 578999


Q ss_pred             EeecccCCCcccccCCCCceeEEEEEEEEecCCCHHHHHHHhcCCC
Q psy8046          88 HMLKLFKTKDAACDATNSLLYNEFYEEIIFNEPTLTMYKTLSSTVP  133 (214)
Q Consensus        88 H~L~L~~~~~~~~~~~~~~v~se~ydeIvF~nPte~f~~~L~~~~~  133 (214)
                      |+|+|+++.+            +.+++|+|+||++.|+++|+.+||
T Consensus       106 H~L~f~~~~y------------~~~h~i~f~np~~~l~~~L~~~Gp  139 (140)
T 3qrl_A          106 HDLNFLQESY------------EVEHVIQIPLNKPLLTEELAKSGS  139 (140)
T ss_dssp             ECCCSSSSEE------------EEEEEEEEESCSHHHHHHHTTTSC
T ss_pred             EEEEeCCCCC------------cceEEEEECCCCHHHHHHHHHhCC
Confidence            9999998764            247799999999999999988876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00