Psyllid ID: psy8053

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490--
MSSVSSHSIRASRRAKADEGAVCCVAHIDGPHLHVANTGDCQAVIGVLTDDNNWIAKKVSVEHNTDNVREVERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVTTILRTNEFSLEIENHTSVKSYDSNQLPSNKPIEDTRCEAKCLLTTGVLLGVFDGHGGAACAQVLSKRLFDYIAATLLPDQLISDCLARLESQEPIQLVESYNDKFDIVGELKQLYLNSFKSFLKQLLSSQKEQQFEMKHMLVNAFLSLDQHISQEAQLKQGGNHLNMKTLGHNTDNVREVERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVRYKWSKELLQKYVVPHVGEQALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLLSPLQAVRLVGEHMSGKVTLRPLQLPRKHMKLSEINELLIARQEGLSLKPLDSNAATHLLRHALGGTEYGIEHSKIAQLLSMPQEVVRLFRDDITITVVYFDSDYLRSPNVR
ccccccHHHHHccccccccccEEEEEEEEccEEEEEEcccccEEEEEEcccccEEEEEcccccccccHHHHHHHHHHccccccccEEEccEEcccccccccccccccccccccccHHccccccccccccccccccccccccEEEEEEcccccEEEEEEcccccHHHHHHHHHHHHHHHHHHccccccHHHHHHccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHEEEEEEEEcccccccccEEEccccEEEEcccccccccHHHHHHHHHcccccccccEEEccEEccccccccccccccccccHHHHHHHcccccccccccccccccccEEEEcEEEEEEEcccccEEEEEcccccccccHHHHHHHHHHHHHcccccccccccHHccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccccccHHHHHHHHccccccccccccccEEEEEEEccccccccccc
ccccccHHHHHHHHHHHHcccEEEEEEEcccEEEEEEcccccEEEEEEccccEEEEEEcccHcccccHHHHHHHHHHccccccEEEEEccEEEEEEcccccccHHHHHHHHcccccEccccccEEEEEEEEEccccccccccHEHEccccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHcccccHHHcccccccHHHHHHHHccccHHHHHHHHHHHHccHHHHHHHHHHcHHHcccEEEEEEEcccEEEEEEcccccEEEEcccEEEEEcccccccccHHHHHHHHHHccccccEEEEEccEEEEEEEEccccccEEEcccHHHHHHHccccccccccccccccccEEEEccEEEEEEEcccccEEEEEcccHHHHcccHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccHHccccHHHHHHHHccccccHEEccccEEEEEEEEccHHccccccc
mssvsshsIRASRRAKADEGAVCCVahidgphlhvantgdCQAVIGVLTDDNNWIAKKVSVEHNTDNVREVERILnehpknerdTVIRMERLLGqlaplrafgdvtTILRTNEFSLeienhtsvksydsnqlpsnkpiedtrcEAKCLLTTGVLLgvfdghggAACAQVLSKRLFDYIAATLLPDQLISDCLARlesqepiqlVESYNDKFDIVGELKQLYLNSFKSFLKQLLSSQKEQQFEMKHMLVNAFLSLDQHISQEAQlkqggnhlnmktlghntdNVREVERILnehpknerdTVIRMERLLGQLAPLRAFGDVRYKWSKELLQKYvvphvgeqalapnyftppyltaqpdvihyrltprdRFLILATDGLWDLLSPLQAVRLVGehmsgkvtlrplqlprkhmKLSEINELLIARQeglslkpldsnAATHLLRHAlggteygieHSKIAQLLSMPQEVVRLFRDDITITVVyfdsdylrspnvr
mssvsshsirasrrakadEGAVCCVAHIDGPHLHVANTGDCQAVIGVLTDDNNWIAKKvsvehntdnvreverilnehpknerdtVIRMERLLGqlaplrafgdvTTILRTNEFSLEIEnhtsvksydsnqlpsNKPIEDTRCEAKCLLTTGVLLGVFDGHGGAACAQVLSKRLFDYIAATLLPDQLISDCLARLESQEPIQLVESYNDKFDIVGELKQLYLNSFKSFLKQLLSSQKEQQFEMKHMLVNAFLSLDQHISQEAQLKQGGNHLNMKTLGHNTDNVREVERIlnehpknerdtvIRMERLLGQLAPLRAFGDVRYKWSKELLQKYVVPHVGEQALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLLSPLQAVRLVGEhmsgkvtlrplqlprkHMKLSEINELLIARQEGLSLKPLDSNAATHLLRHALGGTEYGIEHSKIAQLLSMPQEVVRLFRDDITITvvyfdsdylrspnvr
MssvsshsirasrrakaDEGAVCCVAHIDGPHLHVANTGDCQAVIGVLTDDNNWIAKKVSVEHNTDNVREVERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVTTILRTNEFSLEIENHTSVKSYDSNQLPSNKPIEDTRCEAKCLLTTGVLLGVFDGHGGAACAQVLSKRLFDYIAATLLPDQLISDCLARLESQEPIQLVESYNDKFDIVGELKQLYLNsfksflkqllssqkeqqfeMKHMLVNAFLSLDQHISQEAQLKQGGNHLNMKTLGHNTDNVREVERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVRYKWSKELLQKYVVPHVGEQALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLLSPLQAVRLVGEHMSGKVTLRPLQLPRKHMKLSEINELLIARQEGLSLKPLDSNAATHLLRHALGGTEYGIEHSKIAQLLSMPQEVVRLFRDDITITVVYFDSDYLRSPNVR
*******************GAVCCVAHIDGPHLHVANTGDCQAVIGVLTDDNNWIAKKVSVEHNTDNVREVERIL********DTVIRMERLLGQLAPLRAFGDVTTILRTNEFSLEIE*********************TRCEAKCLLTTGVLLGVFDGHGGAACAQVLSKRLFDYIAATLLPDQLISDCLARLESQEPIQLVESYNDKFDIVGELKQLYLNSFKSFLKQLLS*****QFEMKHMLVNAFLSLDQHI*****************************************TVIRMERLLGQLAPLRAFGDVRYKWSKELLQKYVVPHVGEQALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLLSPLQAVRLVGEHMSGKVTLRPLQLPRKHMKLSEINELLIARQEGLSLKPLDSNAATHLLRHALGGTEYGIEHSKIAQLLSMPQEVVRLFRDDITITVVYFDSDYL******
***********SRRAKADEGAVCCVAHIDGPHLHVANTGDCQAVIGVLTDDNNWIAKKVSVEHNTDNVREVERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVTTILRTNEFSLEIENHTSVKSYDSNQLPSNKPIEDTRCEAKCLLTTGVLLGVFDGHGGAACAQVLSKRLFDYIAATLLPDQ*****************VESYNDKFDIVGELKQLYLNSFKSFLKQLLSSQKEQQFEMKHMLVNAFLSLDQHISQEAQLKQGGNHLNMKTLGHNTDNVREVERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVRYKWSKELLQKYVV***GEQALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLLSPLQAVRLVGEHMS*****************SEINELLIARQEGLSLKPLDSNAATHLLRHALGGTEYGIEHSKIAQLLSMPQEVVRLFRDDITITVVYFDS**L******
*******************GAVCCVAHIDGPHLHVANTGDCQAVIGVLTDDNNWIAKKVSVEHNTDNVREVERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVTTILRTNEFSLEIENHTSVKSYDSNQLPSNKPIEDTRCEAKCLLTTGVLLGVFDGHGGAACAQVLSKRLFDYIAATLLPDQLISDCLARLESQEPIQLVESYNDKFDIVGELKQLYLNSFKSFLKQLLSSQKEQQFEMKHMLVNAFLSLDQHISQEAQLKQGGNHLNMKTLGHNTDNVREVERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVRYKWSKELLQKYVVPHVGEQALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLLSPLQAVRLVGEHMSGKVTLRPLQLPRKHMKLSEINELLIARQEGLSLKPLDSNAATHLLRHALGGTEYGIEHSKIAQLLSMPQEVVRLFRDDITITVVYFDSDYLRSPNVR
***VSSHSIRASRRAKADEGAVCCVAHIDGPHLHVANTGDCQAVIGVLTDDNNWIAKKVSVEHNTDNVREVERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVTTILRTNEFSLEIENHTSVKSYDSNQLPSNKPIEDTRCEAKCLLTTGVLLGVFDGHGGAACAQVLSKRLFDYIAATLLPDQLIS*CLARLESQEPIQLVESYNDKFDIVGELKQLYLNSFKSFLKQLLSSQKEQQFEMKHMLVNAFLSLDQHISQEAQLKQGGNHLNMKTLGHNTDNVREVERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVRYKWSKELLQKYVVPHVGEQALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLLSPLQAVRLVGEHMSGKVTLRPLQLPRKHMKLSEINELLIARQEGLSLKPLDSNAATHLLRHALGGTEYGIEHSKIAQLLSMPQEVVRLFRDDITITVVYFDSDYL******
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MSSVSSHSIRASRRAKADEGAVCCVAHIDGPHLHVANTGDCQAVIGVLTDDNNWIAKKVSVEHNTDNVREVERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVTTILRTNEFSLEIENHTSVKSYDSNQLPSNKPIEDTRCEAKCLLTTGVLLGVFDGHGGAACAQVLSKRLFDYIAATLLPDQLISDCLARLESQEPIQLVESYNDKFDIVGELKQLYLNSFKSFLKQLLSSQKEQQFEMKHMLVNAFLSLDQHISQEAQLKQGGNHLNMKTLGHNTDNVREVERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVRYKWSKELLQKYVVPHVGEQALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLLSPLQAVRLVGEHMSGKVTLRPLQLPRKHMKLSEINELLIARQEGLSLKPLDSNAATHLLRHALGGTEYGIEHSKIAQLLSMPQEVVRLFRDDITITVVYFDSDYLRSPNVR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query492 2.2.26 [Sep-21-2011]
P35816538 [Pyruvate dehydrogenase [ yes N/A 0.764 0.698 0.401 7e-84
Q3UV70538 [Pyruvate dehydrogenase [ yes N/A 0.764 0.698 0.396 1e-82
Q9P0J1537 [Pyruvate dehydrogenase [ yes N/A 0.764 0.700 0.394 4e-82
Q5RA52537 [Pyruvate dehydrogenase [ yes N/A 0.764 0.700 0.394 4e-82
O88483538 [Pyruvate dehydrogenase [ yes N/A 0.764 0.698 0.387 8e-81
Q9P2J9529 [Pyruvate dehydrogenase [ no N/A 0.780 0.725 0.354 4e-69
O88484530 [Pyruvate dehydrogenase [ no N/A 0.806 0.749 0.350 7e-67
O14189444 Protein phosphatase 2C ho yes N/A 0.709 0.786 0.303 4e-35
Q12511572 Protein phosphatase 2C ho yes N/A 0.701 0.603 0.301 8e-32
Q9LQN6662 Probable protein phosphat yes N/A 0.339 0.252 0.296 1e-15
>sp|P35816|PDP1_BOVIN [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Bos taurus GN=PDP1 PE=1 SV=1 Back     alignment and function desciption
 Score =  311 bits (797), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 179/446 (40%), Positives = 262/446 (58%), Gaps = 70/446 (15%)

Query: 105 VTTILRTNEFSLEI-----ENHTSVKSYDSNQLPSNKPIEDTRCEAKCLLTTGVLLGVFD 159
           V +IL+ NE+S ++     +N +SV  +DSNQLP+N PIED R  A CL T G+LLGVFD
Sbjct: 85  VNSILKANEYSFKVPEFDGKNVSSVLGFDSNQLPANAPIEDRRSAATCLQTRGMLLGVFD 144

Query: 160 GHGGAACAQVLSKRLFDYIAATLLPDQLISDCLARLESQE---PI-QLVESYNDKFDIVG 215
           GH G AC+Q +S+RLF YIA +LLP + + +    +ES     PI Q  +  ND F    
Sbjct: 145 GHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHKHPNDYFS--K 202

Query: 216 ELKQLYLNSFKSFLKQL--LSSQKEQQFEMKHMLVNAFLSLDQHISQEAQLKQGGNHLNM 273
           E  +LY NS +++ ++L  L++ +    ++K  L+NAF  LD  IS EAQ+    + LN 
Sbjct: 203 EASKLYFNSLRTYWQELIDLNTGESTDIDVKEALINAFKRLDNDISLEAQVGDPNSFLNY 262

Query: 274 KTL-----------------------------------------------GHNTDNVREV 286
             L                                                HN  N REV
Sbjct: 263 LVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNEREV 322

Query: 287 ERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVRYKWSKELLQKYVVPHVGEQ------ 340
           ER+  EHPKNE  +V++ +RLLG L P RAFGDV++KWS +L QK V+    +Q      
Sbjct: 323 ERLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDL-QKRVIESGPDQLNDNEY 381

Query: 341 --ALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLLSPLQAVRLVGEHMSGKV 398
              + PNY+TPPYLTA+P+V ++RL P+D+FL+LATDGLW+ +     VR+VGE+++G  
Sbjct: 382 TKFIPPNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLTGMH 441

Query: 399 TLRPLQLPRKHMKLSEINELLIARQEGLSLKPLDSNAATHLLRHALGGTEYG-IEHSKIA 457
             +P+ +    + L +++ LL  R+  +S    D NAATHL+RHA+G  E+G ++H +++
Sbjct: 442 HQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLS 501

Query: 458 QLLSMPQEVVRLFRDDITITVVYFDS 483
           ++LS+P+E+ R++RDDITI VV F+S
Sbjct: 502 KMLSLPEELARMYRDDITIIVVQFNS 527
Catalyzes the dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex.
Bos taurus (taxid: 9913)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 4EC: 3
>sp|Q3UV70|PDP1_MOUSE [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Mus musculus GN=Pdp1 PE=2 SV=1 Back     alignment and function description
>sp|Q9P0J1|PDP1_HUMAN [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Homo sapiens GN=PDP1 PE=1 SV=3 Back     alignment and function description
>sp|Q5RA52|PDP1_PONAB [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Pongo abelii GN=PDP1 PE=2 SV=1 Back     alignment and function description
>sp|O88483|PDP1_RAT [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Rattus norvegicus GN=Pdp1 PE=1 SV=1 Back     alignment and function description
>sp|Q9P2J9|PDP2_HUMAN [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial OS=Homo sapiens GN=PDP2 PE=2 SV=2 Back     alignment and function description
>sp|O88484|PDP2_RAT [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial OS=Rattus norvegicus GN=Pdp2 PE=2 SV=1 Back     alignment and function description
>sp|O14189|PP2C5_SCHPO Protein phosphatase 2C homolog C10F6.17c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC10F6.17c PE=3 SV=4 Back     alignment and function description
>sp|Q12511|PP2C5_YEAST Protein phosphatase 2C homolog 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PTC5 PE=1 SV=1 Back     alignment and function description
>sp|Q9LQN6|P2C04_ARATH Probable protein phosphatase 2C 4 OS=Arabidopsis thaliana GN=PLL5 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query492
322780448477 hypothetical protein SINV_12035 [Solenop 0.778 0.802 0.572 1e-138
307202544477 [Pyruvate dehydrogenase [acetyl-transfer 0.780 0.805 0.565 1e-138
340715549477 PREDICTED: Pyruvate dehydrogenase [acety 0.804 0.830 0.556 1e-138
383855294477 PREDICTED: Pyruvate dehydrogenase [acety 0.839 0.865 0.537 1e-138
350422810477 PREDICTED: Pyruvate dehydrogenase [acety 0.780 0.805 0.562 1e-138
332020399477 [Pyruvate dehydrogenase [acetyl-transfer 0.804 0.830 0.553 1e-138
66564967477 PREDICTED: [Pyruvate dehydrogenase [acet 0.804 0.830 0.547 1e-137
380019568477 PREDICTED: Pyruvate dehydrogenase [acety 0.804 0.830 0.544 1e-137
345495159475 PREDICTED: Pyruvate dehydrogenase [acety 0.780 0.808 0.568 1e-137
307187494475 [Pyruvate dehydrogenase [acetyl-transfer 0.778 0.806 0.568 1e-135
>gi|322780448|gb|EFZ09936.1| hypothetical protein SINV_12035 [Solenopsis invicta] Back     alignment and taxonomy information
 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 245/428 (57%), Positives = 309/428 (72%), Gaps = 45/428 (10%)

Query: 104 DVTTILRTNEFSLEIENHTSVKSYDSNQLPSNKPIEDTRCEAKCLLTTGVLLGVFDGHGG 163
           +VT +L+ NE++ E  N  ++K YDSNQL SN PIED R EA+CLLT GVLLGVFDGHGG
Sbjct: 45  EVTNVLQANEYTKEFSNSGAIKYYDSNQLASNNPIEDMRSEAQCLLTKGVLLGVFDGHGG 104

Query: 164 AACAQVLSKRLFDYIAATLLPDQLISDCLARLESQEPIQLVESYNDKFDIVGELKQLYLN 223
            ACAQV+SKRLF YI+A LLP  L+   L    + + + L+E+++DK + V E+K LY  
Sbjct: 105 GACAQVVSKRLFHYISACLLPQNLLEQYLNSFGTDKSLNLLETFSDKVEFVTEIKDLYQA 164

Query: 224 SFKSFLKQLLSSQKEQQFEMKHMLVNAFLSLDQHISQEAQLKQG---------------- 267
           SF SF++ L+ S  ++ F+M+  L NAFL LD  ++ EA L+                  
Sbjct: 165 SFLSFVRDLVQSNTKKDFQMEKALENAFLRLDNDLASEALLQLNKKVAARTLAVAMSGTV 224

Query: 268 -------GNHLNMKTLG----------------------HNTDNVREVERILNEHPKNER 298
                  G HL++  +G                      HN DN  EVERIL+EHP NER
Sbjct: 225 AAVAHIDGPHLHVAGVGDCKAVLGVLSDDGWSAKLMTVEHNADNREEVERILSEHPSNER 284

Query: 299 DTVIRMERLLGQLAPLRAFGDVRYKWSKELLQKYVVPHVGEQALAPNYFTPPYLTAQPDV 358
            TVI+MERLLGQLAPLR+ GD RYKWSK ++ K VVP +GE A+ PNY TPPYLTA PDV
Sbjct: 285 STVIKMERLLGQLAPLRSLGDFRYKWSKNIMNKVVVPFLGETAIPPNYHTPPYLTANPDV 344

Query: 359 IHYRLTPRDRFLILATDGLWDLLSPLQAVRLVGEHMSGKVTLRPLQLPRKHMKLSEINEL 418
            ++RLTP+D+FLILA+DGLWDL+SPLQAVRLVGEHMSGKVTL PL+LPRK+MKLS+INE+
Sbjct: 345 RYHRLTPKDKFLILASDGLWDLISPLQAVRLVGEHMSGKVTLNPLRLPRKNMKLSDINEM 404

Query: 419 LIARQEGLSLKPLDSNAATHLLRHALGGTEYGIEHSKIAQLLSMPQEVVRLFRDDITITV 478
           L+ R+EGL +KPLDSNAATHLLR+ALGGTEYGI+H+K++QLL++P EVVR+FRDDITIT+
Sbjct: 405 LLQRKEGLKMKPLDSNAATHLLRNALGGTEYGIDHAKLSQLLTLPSEVVRIFRDDITITI 464

Query: 479 VYFDSDYL 486
           VY DS++L
Sbjct: 465 VYLDSEFL 472

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|307202544|gb|EFN81891.1| [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|340715549|ref|XP_003396274.1| PREDICTED: Pyruvate dehydrogenase [acetyl-transferring]-phosphatase 1-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|383855294|ref|XP_003703150.1| PREDICTED: Pyruvate dehydrogenase [acetyl-transferring]-phosphatase 1-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|350422810|ref|XP_003493290.1| PREDICTED: Pyruvate dehydrogenase [acetyl-transferring]-phosphatase 1-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|332020399|gb|EGI60819.1| [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|66564967|ref|XP_396531.2| PREDICTED: [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial [Apis mellifera] Back     alignment and taxonomy information
>gi|380019568|ref|XP_003693676.1| PREDICTED: Pyruvate dehydrogenase [acetyl-transferring]-phosphatase 1-like [Apis florea] Back     alignment and taxonomy information
>gi|345495159|ref|XP_001603980.2| PREDICTED: Pyruvate dehydrogenase [acetyl-transferring]-phosphatase 1-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|307187494|gb|EFN72556.1| [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial [Camponotus floridanus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query492
FB|FBgn0029958475 Pdp "Pyruvate dehydrogenase ph 0.441 0.456 0.594 1.2e-98
UNIPROTKB|E1BX90535 PDP1 "Uncharacterized protein" 0.416 0.383 0.469 5.8e-80
UNIPROTKB|F1MG92586 PDP1 "[Pyruvate dehydrogenase 0.416 0.349 0.469 6.6e-79
UNIPROTKB|P35816538 PDP1 "[Pyruvate dehydrogenase 0.416 0.381 0.469 6.6e-79
UNIPROTKB|F1RY43537 PDP1 "Uncharacterized protein" 0.416 0.381 0.469 6.6e-79
UNIPROTKB|F1PKC5562 PDP1 "Uncharacterized protein" 0.416 0.364 0.465 1.4e-78
MGI|MGI:2685870538 Pdp1 "pyruvate dehyrogenase ph 0.416 0.381 0.465 4.6e-78
UNIPROTKB|F1LP63597 Pdp1 "[Pyruvate dehydrogenase 0.416 0.343 0.465 4.6e-78
UNIPROTKB|J3KPU0562 PDP1 "[Pyruvate dehydrogenase 0.416 0.364 0.460 1.5e-77
UNIPROTKB|Q9P0J1537 PDP1 "[Pyruvate dehydrogenase 0.416 0.381 0.460 1.5e-77
FB|FBgn0029958 Pdp "Pyruvate dehydrogenase phosphatase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 708 (254.3 bits), Expect = 1.2e-98, Sum P(2) = 1.2e-98
 Identities = 129/217 (59%), Positives = 168/217 (77%)

Query:   270 HLNMKTLGHNTDNVREVERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVRYKWSKELL 329
             H     + HN DN+ EV RIL EHPK E +TVIR  RLL QLAPLRAFGD RYKWS+E++
Sbjct:   242 HSKKLNIEHNADNMSEVRRILAEHPKEEHETVIRNGRLLSQLAPLRAFGDFRYKWSQEIM 301

Query:   330 QKYVVPHVGEQALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLLSPLQAVRL 389
             Q+ V+P  G QA+APNY+TPPYLTA+PDV  + L P D+FL++A+DGLWD L P + V L
Sbjct:   302 QQKVLPMFGVQAMAPNYYTPPYLTARPDVQQHELGPNDKFLVIASDGLWDFLPPSEVVSL 361

Query:   390 VGEHMSGKVTLRPLQLPRKHMKLSEINELLIARQEGLSLKPLDSNAATHLLRHALGGTEY 449
             VGEH++ K  L P++LP     L EI++ L  R+ GL+ KP+D NAATHL+RHALGGT+Y
Sbjct:   362 VGEHINSKKILEPMRLPEGDTTLQEISQQLAERKAGLTRKPVDQNAATHLIRHALGGTDY 421

Query:   450 GIEHSKIAQLLSMPQEVVRLFRDDITITVVYFDSDYL 486
             GIEHSKI+  L++P++ VRL+RDDITITV+YF+S+++
Sbjct:   422 GIEHSKISYYLTLPRDAVRLYRDDITITVIYFNSEHI 458
GO:0004741 "[pyruvate dehydrogenase (lipoamide)
GO:0006470 "protein dephosphorylation" evidence=ISS;NAS
GO:0004722 "protein serine/threonine phosphatase activity" evidence=NAS
GO:0006090 "pyruvate metabolic process" evidence=ISS
GO:0005759 "mitochondrial matrix" evidence=ISS
GO:0004721 "phosphoprotein phosphatase activity" evidence=IDA
GO:0005739 "mitochondrion" evidence=IDA
GO:0005634 "nucleus" evidence=IDA
GO:0005737 "cytoplasm" evidence=IDA
UNIPROTKB|E1BX90 PDP1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1MG92 PDP1 "[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P35816 PDP1 "[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1RY43 PDP1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1PKC5 PDP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:2685870 Pdp1 "pyruvate dehyrogenase phosphatase catalytic subunit 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1LP63 Pdp1 "[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|J3KPU0 PDP1 "[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9P0J1 PDP1 "[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O14189PP2C5_SCHPO3, ., 1, ., 3, ., 1, 60.30370.70930.7860yesN/A
O88483PDP1_RAT3, ., 1, ., 3, ., 4, 30.38780.76420.6988yesN/A
Q12511PP2C5_YEAST3, ., 1, ., 3, ., 1, 60.30140.70120.6031yesN/A
P35816PDP1_BOVIN3, ., 1, ., 3, ., 4, 30.40130.76420.6988yesN/A
Q3UV70PDP1_MOUSE3, ., 1, ., 3, ., 4, 30.39680.76420.6988yesN/A
Q5RA52PDP1_PONAB3, ., 1, ., 3, ., 4, 30.39460.76420.7001yesN/A
Q9P0J1PDP1_HUMAN3, ., 1, ., 3, ., 4, 30.39460.76420.7001yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.30.766

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query492
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 2e-29
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 1e-24
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 6e-18
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 1e-14
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 3e-13
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 3e-13
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 3e-04
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 0.002
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 0.002
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information 
 Score =  115 bits (290), Expect = 2e-29
 Identities = 76/294 (25%), Positives = 104/294 (35%), Gaps = 110/294 (37%)

Query: 129 SNQLPSNKPIEDTRCEAKCLLTTGVLLGVFDGHGGAACAQVLSKRLFDYIAATLLPDQLI 188
           S+     KP+ED       L  +G   GVFDGHGG+  A+ LSK L +            
Sbjct: 14  SSMQGVRKPMEDAHVITPDLSDSGGFFGVFDGHGGSEAAKFLSKNLPEI----------- 62

Query: 189 SDCLARLESQEPIQLVESYNDKFDIVGELKQLYLNSFKSFLKQLLSSQKEQQFEMKHMLV 248
                                                   L + L  +K++  +++  L 
Sbjct: 63  ----------------------------------------LAEELIKEKDELEDVEEALR 82

Query: 249 NAFLSLDQHISQEAQLKQG---------GNHL---N---------------MKTLGHNTD 281
            AFLS D+ I +E +   G         GN L   N                 T  H   
Sbjct: 83  KAFLSTDEEILEELEALSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPS 142

Query: 282 NVREVERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVRYKWSKELLQKYVVPHVGEQA 341
           N  E  RI            +   R+ G LA  RA GD   K                  
Sbjct: 143 NEDERARIEAAGG------FVINGRVNGVLALSRAIGDFFLK------------------ 178

Query: 342 LAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLLSPLQAVRLVGEHMS 395
                   PY++A+PDV    LT +D FLILA+DGLWD+LS  + V +V +H+S
Sbjct: 179 --------PYVSAEPDVTVVELTEKDDFLILASDGLWDVLSNQEVVDIVRKHLS 224

The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity. Length = 252
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 492
KOG0700|consensus390 100.0
KOG0698|consensus330 100.0
KOG0697|consensus379 100.0
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0699|consensus542 100.0
PTZ00224381 protein phosphatase 2C; Provisional 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 99.95
KOG0697|consensus379 99.93
KOG0700|consensus390 99.92
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.92
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.92
KOG1323|consensus493 99.92
KOG0699|consensus542 99.9
PRK14559645 putative protein serine/threonine phosphatase; Pro 99.88
KOG0698|consensus330 99.86
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 99.84
PLN03145365 Protein phosphatase 2c; Provisional 99.8
PTZ00224381 protein phosphatase 2C; Provisional 99.7
KOG0618|consensus 1081 99.59
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 99.23
KOG1379|consensus330 99.13
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.12
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.1
PRK14559645 putative protein serine/threonine phosphatase; Pro 98.61
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 98.52
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 98.43
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 98.09
KOG0618|consensus1081 97.66
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 97.4
KOG1323|consensus493 97.37
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 95.84
KOG1379|consensus330 95.41
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 93.4
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 92.3
>KOG0700|consensus Back     alignment and domain information 
Probab=100.00  E-value=2.8e-49  Score=390.96  Aligned_cols=277  Identities=35%  Similarity=0.489  Sum_probs=209.1

Q ss_pred             eEEeeCCCCCCCCCCCcceeeeeecCCCceEEEEEeCCCcHHHHHHHHHHHHHHHHHhhCCchhhhHHHhhhhcCcchhh
Q psy8053         124 VKSYDSNQLPSNKPIEDTRCEAKCLLTTGVLLGVFDGHGGAACAQVLSKRLFDYIAATLLPDQLISDCLARLESQEPIQL  203 (492)
Q Consensus       124 v~~~~~~~~~~r~~~eD~~~v~~~~~~~~~~~gVfDGhgG~~~a~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~  203 (492)
                      +..+...+.....+.||+..+..|..+++.|+||||||||++|++|++++|+.+|..+|.+.....+.  .         
T Consensus        71 v~~~n~~q~a~~~~~edrv~~~~s~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~--~---------  139 (390)
T KOG0700|consen   71 VLQANNLQEAQGKAEEDRVSVAVSEENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEE--R---------  139 (390)
T ss_pred             hhhhhhhhhhcCCcccCcceeeeeccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhcc--c---------
Confidence            33333346677888999999999989999999999999999999999999999999888554333321  0         


Q ss_pred             hhhccCchhHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHhhhHhhhhhh------------------eee
Q psy8053         204 VESYNDKFDIVGELKQLYLNSFKSFLKQLLSSQKEQQFEMKHMLVNAFLSLDQHISQEA------------------QLK  265 (492)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~a~~~~d~~~~~~~------------------~~~  265 (492)
                               +..+.+....+.+..+++.+ .........+..+|..||..+|.++...+                  +..
T Consensus       140 ---------f~~e~~~~~~~~~~~~~~~~-~~~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~  209 (390)
T KOG0700|consen  140 ---------FPSEYKSEELEHLLVYWKQL-SSADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGL  209 (390)
T ss_pred             ---------cccccccchhhhhhhhhhcc-cccCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEE
Confidence                     00111122223333344443 22111134556666666666666664322                  223


Q ss_pred             ecCCeEEE------------------------ecCCCCCCChhHHHHHHhhCCCCCCCcEEecccccCCcccccccCCcc
Q psy8053         266 QGGNHLNM------------------------KTLGHNTDNVREVERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVR  321 (492)
Q Consensus       266 i~g~~l~v------------------------LT~DH~p~~~~E~~RI~~~gg~~~~~~v~~~~Rv~G~L~vSRa~GD~~  321 (492)
                      +.|..+||                        ||.||+.+|++|++||+++||+++...+.+.+||.|.|+|||||||.+
T Consensus       210 i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~  289 (390)
T KOG0700|consen  210 IKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNASNEDEVRRIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGY  289 (390)
T ss_pred             EeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhccccHHHHHHHHHhCCCCcceEeeccceeeEEEEeeeecccee
Confidence            55555655                        999999999999999999999999888888899999999999999999


Q ss_pred             cccchhhhhhhccCcccccCCCCCCCCCCceeecceEEEEEeCCCCeEEEEEeCCccccCCHHHHHHHHHHHHcCCccCC
Q psy8053         322 YKWSKELLQKYVVPHVGEQALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLLSPLQAVRLVGEHMSGKVTLR  401 (492)
Q Consensus       322 ~K~~~~~~~~~~~~~~g~~~~~~~~~tpp~Vsa~PdV~~~~l~~~d~FLILaSDGLWD~ls~ee~v~~V~~~l~~~~~~~  401 (492)
                      |||+...+..+    ++ .+.++.++|||||+|+|+|++++|++.|+|||||||||||+|||||||++|.+++.+.    
T Consensus       290 lK~~~~n~e~l----~~-~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~----  360 (390)
T KOG0700|consen  290 LKWPEFNQEPL----LE-KFRIPYIGTPPYLTAEPSITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGK----  360 (390)
T ss_pred             ecchhhccchh----Hh-hcCCCCCCCCCceeccceEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccC----
Confidence            99998665332    33 5667889999999999999999999999999999999999999999999999987742    


Q ss_pred             CCCCccccCchHHHHHHHHHHhhcCCCCCCcchHHHHHHHHhhCCCCCCcchHHHHHH
Q psy8053         402 PLQLPRKHMKLSEINELLIARQEGLSLKPLDSNAATHLLRHALGGTEYGIEHSKIAQL  459 (492)
Q Consensus       402 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~d~~aA~~Li~~Al~~~~~~~~~~~~~~~  459 (492)
                                                  ..|+++|+||||+||+++++ +..++++.|
T Consensus       361 ----------------------------~pd~~~A~hLIr~aL~~aak-k~~~r~s~l  389 (390)
T KOG0700|consen  361 ----------------------------FPDGNPATHLIRHALGRAAK-KRGMRLSDL  389 (390)
T ss_pred             ----------------------------CCCCCHHHHHHHHHHhhhhh-hccccHhhc
Confidence                                        23578999999999998764 334444443

>KOG0698|consensus Back     alignment and domain information
>KOG0697|consensus Back     alignment and domain information
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>KOG0699|consensus Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0697|consensus Back     alignment and domain information
>KOG0700|consensus Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>KOG1323|consensus Back     alignment and domain information
>KOG0699|consensus Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG0698|consensus Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>KOG0618|consensus Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379|consensus Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>KOG0618|consensus Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>KOG1323|consensus Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>KOG1379|consensus Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query492
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 1e-80
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 8e-78
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 6e-06
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 3e-05
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 4e-05
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 5e-05
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 6e-05
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 6e-05
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 6e-05
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 6e-05
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 7e-05
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure 
Iteration: 1

 Score =  296 bits (759), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 176/446 (39%), Positives = 250/446 (56%), Gaps = 70/446 (15%)
Query: 105 VTTILRTNEFSLEI-----ENHTSVKSYDSNQLPSNKPIEDTRCEAKCLLTTGVLLGVFD 159
           V +IL+ NE+S ++     +N +SV  +DSNQLP+N PIED R  A CL T G+LLGVFD
Sbjct: 14  VNSILKANEYSFKVPEFDGKNVSSVLGFDSNQLPANAPIEDRRSAATCLQTRGMLLGVFD 73
Query: 160 GHGGAACAQVLSKRLFDYIAATLLPDQLISDCLARLESQE---PI-QLVESYNDKFDIVG 215
           GH G AC+Q +S+RLF YIA +LLP + + +    +ES     PI Q  +  ND F    
Sbjct: 74  GHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHKHPNDYFS--K 131
Query: 216 ELKQLYLNXXXXXXXXXXXXXXXXXXXM--KHMLVNAFLSLDQHISQEAQLKQGGNHLNM 273
           E  +LY N                   +  K  L+NAF  LD  IS EAQ+    + LN 
Sbjct: 132 EASKLYFNSLRTYWQELIDLNTGESTDIDVKEALINAFKRLDNDISLEAQVGDPNSFLNY 191
Query: 274 KTL-----------------------------------------------GHNTDNVREV 286
             L                                                HN  N REV
Sbjct: 192 LVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNEREV 251
Query: 287 ERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVRYKWSKELLQKYVVPHVGEQ------ 340
           ER+  EHPKNE  +V++ +RLLG L P RAFGDV++KWS +L QK V+    +Q      
Sbjct: 252 ERLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDL-QKRVIESGPDQLNDNEY 310
Query: 341 --ALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLLSPLQAVRLVGEHMSGKV 398
              + PNY+TPPYLTA+P+V ++RL P+D+FL+LATDGLW+ +     VR+VGE+++G  
Sbjct: 311 TKFIPPNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLTGMH 370
Query: 399 TLRPLQLPRKHMKLSEINELLIARQEGLSLKPLDSNAATHLLRHALGGTEYG-IEHSKIA 457
             +P+ +    + L +++ LL  R+  +S    D NAATHL+RHA+G  E+G ++H +++
Sbjct: 371 HQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLS 430
Query: 458 QLLSMPQEVVRLFRDDITITVVYFDS 483
           ++LS+P+E+ R++RDDITI VV F+S
Sbjct: 431 KMLSLPEELARMYRDDITIIVVQFNS 456
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query492
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 1e-104
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 7e-31
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 2e-42
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 6e-19
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 7e-35
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 1e-23
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 3e-25
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 6e-10
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 1e-24
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 1e-10
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 3e-24
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 1e-09
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 2e-23
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 1e-10
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 6e-23
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 3e-09
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 7e-21
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 9e-10
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 8e-20
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 2e-08
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 1e-18
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 4e-08
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 2e-17
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 2e-05
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 3e-14
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-11
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
 Score =  318 bits (815), Expect = e-104
 Identities = 162/450 (36%), Positives = 255/450 (56%), Gaps = 64/450 (14%)

Query: 104 DVTTILRTNEFSLEI-----ENHTSVKSYDSNQLPSNKPIEDTRCEAKCLLTTGVLLGVF 158
            V +IL+ NE+S ++     +N +S+  +DSN+LP+N PIED R    CL T G+LLGVF
Sbjct: 13  QVNSILKANEYSFKVPEFDGKNVSSILGFDSNRLPANAPIEDRRSATTCLQTRGMLLGVF 72

Query: 159 DGHGGAACAQVLSKRLFDYIAATLLPDQLISDCLARLESQEPIQLVESYNDKFD--IVGE 216
           DGH G AC+Q +S+RLF YIA +LLP + + +    +ES   +  +  ++   +     E
Sbjct: 73  DGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHKHPNDYFSKE 132

Query: 217 LKQLYLNSFKSFLKQLLSSQK--EQQFEMKHMLVNAFLSLDQHISQEAQLKQGGNHLNMK 274
             +LY N  +++ ++L+          ++K  L+NAF  LD  IS EAQ+    + LN  
Sbjct: 133 ASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYL 192

Query: 275 TLG-----------------------------------------------HNTDNVREVE 287
            L                                                HN  N RE++
Sbjct: 193 VLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQ 252

Query: 288 RILNEHPKNERDTVIRMERLLGQLAPLRAFGDVRYKWSKELLQKYVVPHVGE-------Q 340
           R+  EHPKNE  +V++ +RLLG L P RAFGDV++KWS +L ++ +     +       +
Sbjct: 253 RLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTK 312

Query: 341 ALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLLSPLQAVRLVGEHMSGKVTL 400
            + PNY TPPYLTA+P+V ++RL P+D+FL+LATDGLW+ +     VR+VGE+++G    
Sbjct: 313 FIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLTGMHHQ 372

Query: 401 RPLQLPRKHMKLSEINELLIARQEGLSLKPLDSNAATHLLRHALGGTEYG-IEHSKIAQL 459
           +P+ +    + L +++ LL  R+  +S    D NAATHL+RHA+G  E+G ++H +++++
Sbjct: 373 QPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLSKM 432

Query: 460 LSMPQEVVRLFRDDITITVVYFDSDYLRSP 489
           LS+P+E+ R++RDDITI VV F+S  + + 
Sbjct: 433 LSLPEELARMYRDDITIIVVQFNSHVVGAY 462
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query492
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 99.93
1txo_A237 Putative bacterial enzyme; serine/threonine protei 99.91
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 99.9
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 99.9
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 99.84
3rnr_A211 Stage II sporulation E family protein; structural 99.81
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 99.75
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 99.74
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 99.73
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 99.72
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 99.69
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 99.65
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 99.65
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 99.63
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 99.63
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 99.61
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 99.56
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 99.54
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 99.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 98.99
1txo_A237 Putative bacterial enzyme; serine/threonine protei 98.88
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 98.81
3rnr_A211 Stage II sporulation E family protein; structural 98.79
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 98.75
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 98.52
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 98.38
3f79_A255 Probable two-component response regulator; adaptor 98.23
3ke6_A399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 96.6
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 93.69
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 90.3
3eq2_A394 Probable two-component response regulator; adaptor 90.04
3f79_A255 Probable two-component response regulator; adaptor 81.1
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
Probab=100.00  E-value=6e-58  Score=482.18  Aligned_cols=389  Identities=41%  Similarity=0.736  Sum_probs=250.2

Q ss_pred             cccccceeecccccccccccCCCC-----eEEeeCCCCCCCCCCCcceeeeeecCCCceEEEEEeCCCcHHHHHHHHHHH
Q psy8053         100 RAFGDVTTILRTNEFSLEIENHTS-----VKSYDSNQLPSNKPIEDTRCEAKCLLTTGVLLGVFDGHGGAACAQVLSKRL  174 (492)
Q Consensus       100 ra~gd~~~kl~~~~~~~~~~~~~~-----v~~~~~~~~~~r~~~eD~~~v~~~~~~~~~~~gVfDGhgG~~~a~~~~~~l  174 (492)
                      .+..++..+|++++.++.++...+     +.+|.+.+.+.|.+|||++.+..++..+..||||||||||+.||+|++++|
T Consensus         9 l~~~~~~~~l~~~e~s~~~~~~~g~~~~~v~~~~s~~g~~R~~nED~~~v~~~~~~~~~lfgVfDGHGG~~aa~~as~~L   88 (467)
T 2pnq_A            9 LTPPQVNSILKANEYSFKVPEFDGKNVSSILGFDSNRLPANAPIEDRRSATTCLQTRGMLLGVFDGHAGCACSQAVSERL   88 (467)
T ss_dssp             CCHHHHHHHHHHHCEEEECCCCTTTCCCSEEEEEEEEECCSSSCCEEEEEEEESSSSCEEEEEEEEESSSHHHHHHHHHH
T ss_pred             CCHHHHHHHHhccCeeEEecCCCCCcccceEEEEeeccCCCCCCCCceeeeeccCCCcEEEEEECCCCCHHHHHHHHHHH
Confidence            345677888888899998865554     999999999999999999998887777889999999999999999999999


Q ss_pred             HHHHHHhhCCchhhhHHHhhhhcCcc-hhhhhhccCchhHH-HHHHHHHHHHHHHHHHHHHhcccc--chhhHHHHHHHH
Q psy8053         175 FDYIAATLLPDQLISDCLARLESQEP-IQLVESYNDKFDIV-GELKQLYLNSFKSFLKQLLSSQKE--QQFEMKHMLVNA  250 (492)
Q Consensus       175 ~~~l~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~al~~a  250 (492)
                      +.+|...+++...+.++..+.+.+.+ ..+.++++.+.++. .++...|...+..+++........  ....+..+|..+
T Consensus        89 ~~~i~~~l~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~a  168 (467)
T 2pnq_A           89 FYYIAVSLLPHETLLEIENAVESGRALLPILQWHKHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINA  168 (467)
T ss_dssp             HHHHHHHHCCHHHHHHHHTTTC----CCCCEEECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHH
T ss_pred             HHHHHHhhcchhhhhhhhhhhhccccccccccccccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHH
Confidence            99999877655555443222222111 12222222222221 123344444554455433221100  112466677777


Q ss_pred             HHhhhHhhhhhh----------------------------------eeeecCC-------------eEEEecCCCCCCCh
Q psy8053         251 FLSLDQHISQEA----------------------------------QLKQGGN-------------HLNMKTLGHNTDNV  283 (492)
Q Consensus       251 ~~~~d~~~~~~~----------------------------------~~~i~g~-------------~l~vLT~DH~p~~~  283 (492)
                      |..+|..+...+                                  +++++++             .+..||.||+|.++
T Consensus       169 f~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~  248 (467)
T 2pnq_A          169 FKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNE  248 (467)
T ss_dssp             HHHHHHHHHHHHHHCCSSHHHHHHHHHHHHSEECEEEEEEETTEEEEEEESSCEEEEEEECTTSCEEEEECCCCCSTTCH
T ss_pred             HHHHHHHHHHhhhhcccccccccccccCCCCcceEEEEEEECCEEEEEECCCceEEEEEecCCCcEEEEECCCCCCCCCH
Confidence            777766553211                                  1123333             33349999999999


Q ss_pred             hHHHHHHhhCCCCCCCcEEecccccCCcccccccCCcccccchhhhhhhccCccc-------ccCCCCCCCCCCceeecc
Q psy8053         284 REVERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVRYKWSKELLQKYVVPHVG-------EQALAPNYFTPPYLTAQP  356 (492)
Q Consensus       284 ~E~~RI~~~gg~~~~~~v~~~~Rv~G~L~vSRa~GD~~~K~~~~~~~~~~~~~~g-------~~~~~~~~~tpp~Vsa~P  356 (492)
                      .|++||+++||..+...++..+|++|.|++||||||+.||++.+++++++.+.+|       ....++.+.+||||+++|
T Consensus       249 ~E~~Ri~~~g~~~~~~~~~~~~Rv~G~l~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~P  328 (467)
T 2pnq_A          249 RELQRLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEP  328 (467)
T ss_dssp             HHHHHHHHTSCGGGHHHHBSSSSBTTTBSSSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCC
T ss_pred             HHHHHHHHcCCCcccceeEecCccccccccchhcCchhhcccchhhhhhhcccccccccccccccccccccCCCcccccc
Confidence            9999999999865545667789999999999999999999999988888877777       345677889999999999


Q ss_pred             eEEEEEeCCCCeEEEEEeCCccccCCHHHHHHHHHHHHcCCccCCCCCCccccCchHHHHHHHHHHhhcCCCCCCcchHH
Q psy8053         357 DVIHYRLTPRDRFLILATDGLWDLLSPLQAVRLVGEHMSGKVTLRPLQLPRKHMKLSEINELLIARQEGLSLKPLDSNAA  436 (492)
Q Consensus       357 dV~~~~l~~~d~FLILaSDGLWD~ls~ee~v~~V~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~d~~aA  436 (492)
                      ||+.++|+++|+|||||||||||+|+++||+++|..++.......|...|+.++++.++++.|.+++++...++.|+|||
T Consensus       329 dv~~~~l~~~D~fLVLaSDGLwd~ls~~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~naA  408 (467)
T 2pnq_A          329 EVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAA  408 (467)
T ss_dssp             EEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCSSCC-------------------------------CCHH
T ss_pred             eEEEEEcCCCCeEEEEEecCccccCChHHHHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCchhhHHH
Confidence            99999999999999999999999999999999999998765544442226778899999999999998888888899999


Q ss_pred             HHHHHHhhCCCCCC-cchHHHHHHhCCCcccccccccCcEEEEEEeCCCcccC
Q psy8053         437 THLLRHALGGTEYG-IEHSKIAQLLSMPQEVVRLFRDDITITVVYFDSDYLRS  488 (492)
Q Consensus       437 ~~Li~~Al~~~~~~-~~~~~~~~~l~~~~~~~r~~~DnITviVv~~~~~~~~~  488 (492)
                      ++||++||+++.+| .++++++.||++|++.+|+++||||||||+|+.+.+.+
T Consensus       409 ~~Lir~Al~~~~~Ge~~~~~~~~ll~~~~~~~R~~~DdITViVv~~~~~~~~~  461 (467)
T 2pnq_A          409 THLIRHAVGNNEFGAVDHERLSKMLSLPEELARMYRDDITIIVVQFNSHVVGA  461 (467)
T ss_dssp             HHHHHHHHC-------------------------CCSCEEEEEEEECHHHHHH
T ss_pred             HHHHHHHhcCCCcCcchHHHHHhhhcCCccccccCCCCcEEEEEEeCchHhhh
Confidence            99999999987667 78999999999999999999999999999999887753
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 492
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 3e-12
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 0.002
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.0 bits (157), Expect = 3e-12
 Identities = 52/331 (15%), Positives = 90/331 (27%), Gaps = 93/331 (28%)

Query: 154 LLGVFDGHGGAACAQVLSKRLFDYIAATLLPDQLISDCLARLESQEPIQLVESYNDKFDI 213
              V+DGH G+  A+   + L D+I                             ++   +
Sbjct: 54  FFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRV 113

Query: 214 VGELKQLYLNSFKSFLKQLLSSQKEQQFEMKHMLVNAFLSLDQHISQEAQLKQGGNHLNM 273
           + E K     S  + +  L+S Q                           L +       
Sbjct: 114 MSEKKHGADRSGSTAVGVLISPQHTYFINCGD--------------SRGLLCRNRKVHFF 159

Query: 274 KTLGHNTDNVREVERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVRYKWSKELLQKYV 333
            T  H   N  E ERI N            ++R+ G LA  RA GD  YK          
Sbjct: 160 -TQDHKPSNPLEKERIQNAGGSV------MIQRVNGSLAVSRALGDFDYKCVHGK----- 207

Query: 334 VPHVGEQALAPNYFTPPYLTAQPDVIHYRLT-PRDRFLILATDGLWDLLSPLQAVRLVGE 392
                         T   ++ +P+V     +   D+F+ILA DG+WD++   +    V  
Sbjct: 208 ------------GPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRS 255

Query: 393 HMSGKVTLRPLQLPRKHMKLSEINELLIARQEGLSLKPLDSNAATHLLRHALGGTEYGIE 452
            +     L                                      ++   L        
Sbjct: 256 RLEVTDDLE--------------------------------KVCNEVVDTCLY------- 276

Query: 453 HSKIAQLLSMPQEVVRLFRDDITITVVYFDS 483
                          +  RD++++ ++ F +
Sbjct: 277 ---------------KGSRDNMSVILICFPN 292
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query492
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 99.93
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 99.79
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 98.91
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-40  Score=323.08  Aligned_cols=263  Identities=20%  Similarity=0.248  Sum_probs=178.3

Q ss_pred             CCeEEeeCCCCCCCCCCCcceeeeeecCC---CceEEEEEeCCCcHHHHHHHHHHHHHHHHHhhCCchhhhHHHhhhhcC
Q psy8053         122 TSVKSYDSNQLPSNKPIEDTRCEAKCLLT---TGVLLGVFDGHGGAACAQVLSKRLFDYIAATLLPDQLISDCLARLESQ  198 (492)
Q Consensus       122 ~~v~~~~~~~~~~r~~~eD~~~v~~~~~~---~~~~~gVfDGhgG~~~a~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~  198 (492)
                      ..+.......+|+|..|||++++...+..   +..||||||||||+.||+|++++|+.+|.+.+...         ..  
T Consensus        19 ~~~~~g~~s~~G~R~~~ED~~~~~~~~~~~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~---------~~--   87 (295)
T d1a6qa2          19 NGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFK---------GS--   87 (295)
T ss_dssp             TTEEEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHH---------CS--
T ss_pred             CceEEEEEeCccCCCcccCeeEEEcccCCCCCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhc---------cc--
Confidence            34544455668999999999988776533   34899999999999999999999999997653100         00  


Q ss_pred             cchhhhhhccCchhHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHhhhHhhhhhheeeecCCeEEE-----
Q psy8053         199 EPIQLVESYNDKFDIVGELKQLYLNSFKSFLKQLLSSQKEQQFEMKHMLVNAFLSLDQHISQEAQLKQGGNHLNM-----  273 (492)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~a~~~~d~~~~~~~~~~i~g~~l~v-----  273 (492)
                            ........+.++++++|......+.........  ...+++++..+++.-+    ...+++++++++|+     
T Consensus        88 ------~~~~~~~~~~~al~~a~~~~~~~~~~~~~~~~~--~~~~GtTa~~~~i~~~----~l~vanvGDSR~~l~~~~~  155 (295)
T d1a6qa2          88 ------AGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHG--ADRSGSTAVGVLISPQ----HTYFINCGDSRGLLCRNRK  155 (295)
T ss_dssp             ------SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--CCCCEECEEEEEECSS----EEEEEEESSCEEEEEETTE
T ss_pred             ------cccchHHHHHHHHHHHHHHHHHHHhhhhhhccC--cCCCCCeEEEEEeeCC----EEEEEecCCCeEEEeeccc
Confidence                  000011122233444443333322211111000  0001111111111000    00123455666555     


Q ss_pred             ---ecCCCCCCChhHHHHHHhhCCCCCCCcEEecccccCCcccccccCCcccccchhhhhhhccCcccccCCCCCCCCCC
Q psy8053         274 ---KTLGHNTDNVREVERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVRYKWSKELLQKYVVPHVGEQALAPNYFTPP  350 (492)
Q Consensus       274 ---LT~DH~p~~~~E~~RI~~~gg~~~~~~v~~~~Rv~G~L~vSRa~GD~~~K~~~~~~~~~~~~~~g~~~~~~~~~tpp  350 (492)
                         ||.||+|.++.|++||++.||      .+..+|++|.|++||||||+.+|.....                 ..++|
T Consensus       156 ~~~lT~dH~~~~~~E~~Ri~~~gg------~v~~~r~~g~l~~tRa~Gd~~~k~~~~~-----------------~~~~~  212 (295)
T d1a6qa2         156 VHFFTQDHKPSNPLEKERIQNAGG------SVMIQRVNGSLAVSRALGDFDYKCVHGK-----------------GPTEQ  212 (295)
T ss_dssp             EEEECCCCCTTSHHHHHHHHHTTC------CEETTEETTTBSCSBCEECGGGSCCTTC-----------------CGGGS
T ss_pred             ceeeccccCcccHHHHhhHhhcCC------cccccccCCceeeeeccCcHHhhhcccc-----------------Ccccc
Confidence               999999999999999999997      5678899999999999999999964321                 12447


Q ss_pred             ceeecceEEEEEeC-CCCeEEEEEeCCccccCCHHHHHHHHHHHHcCCccCCCCCCccccCchHHHHHHHHHHhhcCCCC
Q psy8053         351 YLTAQPDVIHYRLT-PRDRFLILATDGLWDLLSPLQAVRLVGEHMSGKVTLRPLQLPRKHMKLSEINELLIARQEGLSLK  429 (492)
Q Consensus       351 ~Vsa~PdV~~~~l~-~~d~FLILaSDGLWD~ls~ee~v~~V~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~  429 (492)
                      +|+++|||..+++. ++|+|||||||||||+|+++|++++|++.+.....                              
T Consensus       213 ~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~ei~~~v~~~~~~~~~------------------------------  262 (295)
T d1a6qa2         213 LVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDD------------------------------  262 (295)
T ss_dssp             SSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCC------------------------------
T ss_pred             cccccccceEEEeecccceeEeeecCcccccCCHHHHHHHHHHHhhcCCC------------------------------
Confidence            89999999999986 56789999999999999999999999987653111                              


Q ss_pred             CCcchHHHHHHHHhhCCCCCCcchHHHHHHhCCCcccccccccCcEEEEEEeCCC
Q psy8053         430 PLDSNAATHLLRHALGGTEYGIEHSKIAQLLSMPQEVVRLFRDDITITVVYFDSD  484 (492)
Q Consensus       430 ~~d~~aA~~Li~~Al~~~~~~~~~~~~~~~l~~~~~~~r~~~DnITviVv~~~~~  484 (492)
                        .+.+|..|+..|+..+                      ++||||||||+|...
T Consensus       263 --~~~~a~~Lv~~A~~~g----------------------s~DNiTvivv~~~~~  293 (295)
T d1a6qa2         263 --LEKVCNEVVDTCLYKG----------------------SRDNMSVILICFPNA  293 (295)
T ss_dssp             --HHHHHHHHHHHHHHTT----------------------CCSCEEEEEEECTTS
T ss_pred             --HHHHHHHHHHHHHhcC----------------------CCCCeEEEEEeccCC
Confidence              1567889999997643                      599999999999753
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure