Psyllid ID: psy8074

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370------
MTGNEAPATGNSHLANIPVVHEEREPAAEKPDREDDHKKEKSVLQAKLTKLAIQIGYAGSTIAVLTVVILVIQFCVKTFVIEDKSWKNTYANEFVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEVLSKTTPKFSSLPSNVGNLIVQAISINSAYTSRIMPPDEPTELPKQVGNKTECALLGFVLALGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQGGGYRLFTKGASEIPPDEPTELPKQVGNKTECALLGFVLALGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQGGGYRLFTKGASEIVLKNYGNICRVQSLK
ccccccccccccEEEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEccccccHHHHHHHHHHHHHEEEEEEEEcccccHHHHHHHHHHHHHHHHHccccEEcHHHHHcccccEEEEccccccccccEEEEEEEEEEccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHccccHHHHHHHccccccEEEEcccccccEEEEEEEccccEEEEEEccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHccccccccEEEccccccccEEEEEEEcccccEEEEEccHHHHHHHHcHHHccccccc
cccccEEEEEcccccccccHHccccccHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHEEEEccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccEEEEcccccccccccEEEEEEEEcccEEEcccccccccHHHHHHHHHHHHHHHHHcccccccccccccccEcccHHHHHHHHHHHHHcccHHHHHHHcccHEEEEEEEccccccEEEEEEEcccccEEEEEcccHHHHHHHHHHHHHccccHHcccccEEEEEEccccccccccccHHccccccccccccccccHHHHHHcccEEEEEccccHHHHHHHHHHccEEEEc
mtgneapatgnshlanipvvheerepaaekpdreddhkKEKSVLQAKLTKLAIQIGYAGSTIAVLTVVILVIQFCVKTFVIedkswkntyANEFVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKmmkdnnlvRHLDACETmgnataicsdktgtlttnRMTVVQSYICEVLskttpkfsslpsnvgNLIVQAISINsaytsrimppdeptelpkqvgnkteCALLGFVLALGKNyqtwrddipeemLTRVYTFNSVRKSmstviprqgggyrlftkgaseippdeptelpkqvgnkteCALLGFVLALGKNyqtwrddipeemLTRVYTFNSVRKSmstviprqgggyrlftKGASEIVLKNYgnicrvqslk
mtgneapatgnshlanipvvhEEREPAaekpdreddhkkEKSVLQAKLTKLAIQIGYAGSTIAVLTVVILVIQFCVKTFVIEDKSWKNTYANEFVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATaicsdktgtlttNRMTVVQSYICEVLSKTTPKFSSLPSNVGNLIVQAISINSAYTSRIMPPDEPTELPKQVGNKTECALLGFVLALGKNYQTWRDDIPEEMLTRVYTfnsvrksmstviprqgggyRLFTKGASEIPPDEPTELPKQVGNKTECALLGFVLALGKNYQTWRDDIPEEMLTRVYTfnsvrksmstviprqgggyrLFTKGASEivlknygnicrvqslk
MTGNEAPATGNSHLANIPVVHEEREPAAEKPDREDDHKKEKSVLQAKLTKLAIQIGYAGStiavltvvilviQFCVKTFVIEDKSWKNTYANEFVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEVLSKTTPKFSSLPSNVGNLIVQAISINSAYTSRIMPPDEPTELPKQVGNKTECALLGFVLALGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQGGGYRLFTKGASEIPPDEPTELPKQVGNKTECALLGFVLALGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQGGGYRLFTKGASEIVLKNYGNICRVQSLK
*******************************************LQAKLTKLAIQIGYAGSTIAVLTVVILVIQFCVKTFVIEDKSWKNTYANEFVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEVLSKTTPKFSSLPSNVGNLIVQAISINSAYTS****************NKTECALLGFVLALGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQGGGYRLFT********************KTECALLGFVLALGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQGGGYRLFTKGASEIVLKNYGNICRV****
**GNEAPATGNSHLANIPVVHE***********************AKLTKLAIQIGYAGSTIAVLTVVILVIQFCVKTFVIEDKSWKNTYANEFVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEVLSKT*****SLPSNVGNLIVQAISINSAYTSRIM**********QVGNKTECALLGFVLALGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQGGGYRLFTKGASEIPPDEPTELPKQVGNKTECALLGFVLALGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQGGGYRLFTKGASEIVLKNYGNICRVQ***
*********GNSHLANIPVVHE*********************LQAKLTKLAIQIGYAGSTIAVLTVVILVIQFCVKTFVIEDKSWKNTYANEFVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEVLSKTTPKFSSLPSNVGNLIVQAISINSAYTSRIMPPDEPTELPKQVGNKTECALLGFVLALGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQGGGYRLFTKGASEIPPDEPTELPKQVGNKTECALLGFVLALGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQGGGYRLFTKGASEIVLKNYGNICRVQSLK
***NEAPATGNSHLANIPVVHE***********************AKLTKLAIQIGYAGSTIAVLTVVILVIQFCVKTFVIEDKSWKNTYANEFVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEVLSKTTPKFSSLPSNVGNLIVQAISINSAYTSRIMPPDEPTELPKQVGNKTECALLGFVLALGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQGGGYRLFTKGASEIPPDEPTELPKQVGNKTECALLGFVLALGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQGGGYRLFTKGASEIVLKNYGNICRVQSLK
oooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MTGNEAPATGNSHLANIPVVHEEREPAAEKPDREDDHKKEKSVLQAKLTKLAIQIGYAGSTIAVLTVVILVIQFCVKTFVIEDKSWKNTYANEFVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEVLSKTTPKFSSLPSNVGNLIVQAISINSAYTSRIMPPDEPTELPKQVGNKTECALLGFVLALGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQGGGYRLFTKGASEIPPDEPTELPKQVGNKTECALLGFVLALGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQGGGYRLFTKGASEIVLKNYGNICRVQSLK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query376 2.2.26 [Sep-21-2011]
Q16720 1220 Plasma membrane calcium-t yes N/A 0.686 0.211 0.655 6e-93
Q64568 1258 Plasma membrane calcium-t yes N/A 0.656 0.196 0.673 3e-92
Q64542 1203 Plasma membrane calcium-t no N/A 0.686 0.214 0.651 9e-92
P11505 1258 Plasma membrane calcium-t no N/A 0.747 0.223 0.597 3e-90
Q9R0K7 1198 Plasma membrane calcium-t no N/A 0.686 0.215 0.640 5e-90
P11506 1243 Plasma membrane calcium-t no N/A 0.686 0.207 0.640 6e-90
Q01814 1243 Plasma membrane calcium-t no N/A 0.686 0.207 0.636 1e-89
P58165 1112 Plasma membrane calcium-t N/A N/A 0.691 0.233 0.640 2e-89
P23634 1241 Plasma membrane calcium-t no N/A 0.656 0.199 0.653 7e-88
P20020 1258 Plasma membrane calcium-t no N/A 0.747 0.223 0.597 3e-86
>sp|Q16720|AT2B3_HUMAN Plasma membrane calcium-transporting ATPase 3 OS=Homo sapiens GN=ATP2B3 PE=1 SV=3 Back     alignment and function desciption
 Score =  341 bits (874), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 175/267 (65%), Positives = 210/267 (78%), Gaps = 9/267 (3%)

Query: 22  EEREPAAEKPDREDDHKKEKSVLQAKLTKLAIQIGYAGSTIAVLTVVILVIQFCVKTFVI 81
           EERE       + +  KKEKSVLQ KLTKLA+QIG AG  ++ +TV+ILV+ F ++TFV+
Sbjct: 343 EEREKK-----KANAPKKEKSVLQGKLTKLAVQIGKAGLVMSAITVIILVLYFVIETFVV 397

Query: 82  EDKSW----KNTYANEFVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRH 137
           E ++W       Y   FV+  IIGVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRH
Sbjct: 398 EGRTWLAECTPVYVQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRH 457

Query: 138 LDACETMGNATAICSDKTGTLTTNRMTVVQSYICEVLSKTTPKFSSLPSNVGNLIVQAIS 197
           LDACETMGNATAICSDKTGTLTTNRMTVVQSY+ +   K  P  S+L   + +L+V AIS
Sbjct: 458 LDACETMGNATAICSDKTGTLTTNRMTVVQSYLGDTHYKEIPAPSALTPKILDLLVHAIS 517

Query: 198 INSAYTSRIMPPDEPTELPKQVGNKTECALLGFVLALGKNYQTWRDDIPEEMLTRVYTFN 257
           INSAYT++I+PP++   LP+QVGNKTECALLGFVL L +++Q  R+ IPE+ L +VYTFN
Sbjct: 518 INSAYTTKILPPEKEGALPRQVGNKTECALLGFVLDLKRDFQPVREQIPEDKLYKVYTFN 577

Query: 258 SVRKSMSTVIPRQGGGYRLFTKGASEI 284
           SVRKSMSTVI    GG+RLF+KGASEI
Sbjct: 578 SVRKSMSTVIRMPDGGFRLFSKGASEI 604
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8
>sp|Q64568|AT2B3_RAT Plasma membrane calcium-transporting ATPase 3 OS=Rattus norvegicus GN=Atp2b3 PE=2 SV=2 Back     alignment and function description
>sp|Q64542|AT2B4_RAT Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus GN=Atp2b4 PE=2 SV=1 Back     alignment and function description
>sp|P11505|AT2B1_RAT Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus GN=Atp2b1 PE=2 SV=2 Back     alignment and function description
>sp|Q9R0K7|AT2B2_MOUSE Plasma membrane calcium-transporting ATPase 2 OS=Mus musculus GN=Atp2b2 PE=1 SV=2 Back     alignment and function description
>sp|P11506|AT2B2_RAT Plasma membrane calcium-transporting ATPase 2 OS=Rattus norvegicus GN=Atp2b2 PE=2 SV=2 Back     alignment and function description
>sp|Q01814|AT2B2_HUMAN Plasma membrane calcium-transporting ATPase 2 OS=Homo sapiens GN=ATP2B2 PE=1 SV=2 Back     alignment and function description
>sp|P58165|AT2B2_OREMO Plasma membrane calcium-transporting ATPase 2 (Fragment) OS=Oreochromis mossambicus GN=atp2b2 PE=2 SV=1 Back     alignment and function description
>sp|P23634|AT2B4_HUMAN Plasma membrane calcium-transporting ATPase 4 OS=Homo sapiens GN=ATP2B4 PE=1 SV=2 Back     alignment and function description
>sp|P20020|AT2B1_HUMAN Plasma membrane calcium-transporting ATPase 1 OS=Homo sapiens GN=ATP2B1 PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query376
328724399 1218 PREDICTED: plasma membrane calcium-trans 0.747 0.230 0.824 1e-133
328724395 1081 PREDICTED: plasma membrane calcium-trans 0.747 0.259 0.824 1e-133
328724397 1170 PREDICTED: plasma membrane calcium-trans 0.747 0.240 0.824 1e-133
328705696 1073 PREDICTED: plasma membrane calcium-trans 0.747 0.261 0.797 1e-128
242013056 1076 Plasma membrane calcium-transporting ATP 0.736 0.257 0.802 1e-127
340729533 1193 PREDICTED: plasma membrane calcium-trans 0.752 0.237 0.799 1e-125
350411677 1193 PREDICTED: plasma membrane calcium-trans 0.752 0.237 0.799 1e-125
328783833 1186 PREDICTED: plasma membrane calcium-trans 0.723 0.229 0.819 1e-125
383859188 1172 PREDICTED: plasma membrane calcium-trans 0.755 0.242 0.821 1e-124
380018752 1189 PREDICTED: plasma membrane calcium-trans 0.702 0.222 0.796 1e-124
>gi|328724399|ref|XP_001945158.2| PREDICTED: plasma membrane calcium-transporting ATPase 3-like isoform 1 [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  480 bits (1235), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 240/291 (82%), Positives = 259/291 (89%), Gaps = 10/291 (3%)

Query: 4   NEAPATGNSHLANIPVVH-----EEREPAA----EKPDREDDHKKEKSVLQAKLTKLAIQ 54
           +E P T NSH  +I +       E  + AA    +  + E+  KK+KSVLQAKLTKLAIQ
Sbjct: 296 DEVPPTINSHATDIGMKQMDKGGETDDDAAAGGGQSGESEEPAKKDKSVLQAKLTKLAIQ 355

Query: 55  IGYAGSTIAVLTVVILVIQFCVKTFVIEDKSWKNTYANEFVRHLIIGVTVLVVAVPEGLP 114
           IGYAGSTIAVLTV+ILVIQFC+ TFVI+ K WKN YA EFVRHLIIGVTVLVVAVPEGLP
Sbjct: 356 IGYAGSTIAVLTVLILVIQFCIHTFVIQQKQWKNHYAGEFVRHLIIGVTVLVVAVPEGLP 415

Query: 115 LAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEVL 174
           LAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEVL
Sbjct: 416 LAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEVL 475

Query: 175 SKTTPKFSSLPSNVGNLIVQAISINSAYTSRIMPPDEPT-ELPKQVGNKTECALLGFVLA 233
           SKT P+F+S+PSNVGNL+VQAISINSAYTS+IMPPD+PT ELPKQVGNKTECALLGF+LA
Sbjct: 476 SKTMPQFASIPSNVGNLLVQAISINSAYTSKIMPPDDPTSELPKQVGNKTECALLGFILA 535

Query: 234 LGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQGGGYRLFTKGASEI 284
           LGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPR+GGGYRLFTKGASEI
Sbjct: 536 LGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPREGGGYRLFTKGASEI 586

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|328724395|ref|XP_003248134.1| PREDICTED: plasma membrane calcium-transporting ATPase 3-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|328724397|ref|XP_003248135.1| PREDICTED: plasma membrane calcium-transporting ATPase 3-like isoform 3 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|328705696|ref|XP_001950494.2| PREDICTED: plasma membrane calcium-transporting ATPase 3-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|242013056|ref|XP_002427234.1| Plasma membrane calcium-transporting ATPase, putative [Pediculus humanus corporis] gi|212511550|gb|EEB14496.1| Plasma membrane calcium-transporting ATPase, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|340729533|ref|XP_003403055.1| PREDICTED: plasma membrane calcium-transporting ATPase 3-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350411677|ref|XP_003489420.1| PREDICTED: plasma membrane calcium-transporting ATPase 3-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|328783833|ref|XP_003250350.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 [Apis mellifera] Back     alignment and taxonomy information
>gi|383859188|ref|XP_003705078.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 isoform 2 [Megachile rotundata] Back     alignment and taxonomy information
>gi|380018752|ref|XP_003693287.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 [Apis florea] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query376
FB|FBgn0259214 1255 PMCA "plasma membrane calcium 0.75 0.224 0.698 3.5e-98
WB|WBGene00003153 1234 mca-3 [Caenorhabditis elegans 0.667 0.203 0.665 2.1e-81
UNIPROTKB|K7GMU3 1109 LOC100520061 "Uncharacterized 0.656 0.222 0.653 9.7e-80
UNIPROTKB|Q16720 1220 ATP2B3 "Plasma membrane calciu 0.656 0.202 0.661 1.1e-79
UNIPROTKB|F1LPH4 1109 Atp2b3 "Plasma membrane calciu 0.656 0.222 0.653 1.2e-79
UNIPROTKB|D4A1Z6 1157 Atp2b4 "Plasma membrane calciu 0.686 0.222 0.632 1.5e-79
UNIPROTKB|K7GQP7 1158 LOC100520061 "Uncharacterized 0.656 0.213 0.653 2.1e-79
UNIPROTKB|F8WG66 1173 Atp2b3 "Plasma membrane calciu 0.656 0.210 0.653 3.3e-79
UNIPROTKB|K7GRJ7 1206 LOC100520061 "Uncharacterized 0.656 0.204 0.653 3.5e-79
UNIPROTKB|F1NJ71 1155 ATP2B2 "Uncharacterized protei 0.710 0.231 0.613 4.4e-79
FB|FBgn0259214 PMCA "plasma membrane calcium ATPase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 975 (348.3 bits), Expect = 3.5e-98, P = 3.5e-98
 Identities = 199/285 (69%), Positives = 217/285 (76%)

Query:     3 GNEAPATGNSHLANIPVVHEERE--PAAEKPDR-EDDHKKEKSVLQAKLTKLAIQIGYAG 59
             G++AP+   +  + I     E    P +      E  HKKEKSVLQAKLTKLAIQIGYAG
Sbjct:   306 GSQAPSQRETVTSEITKSESEGNHLPQSSSSGAAETGHKKEKSVLQAKLTKLAIQIGYAG 365

Query:    60 SXXXXXXXXXXXXQFCVKTFVIEDKSWKNTYANEFVRHLIIGVTVLVVAVPEGLPLAVTL 119
             S            QFC+KTFVI++K WKNTYAN  V+HLIIGVTVLVVAVPEGLPLAVTL
Sbjct:   366 STIAVLTVIILIIQFCIKTFVIDEKPWKNTYANNLVKHLIIGVTVLVVAVPEGLPLAVTL 425

Query:   120 SLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEVLSKTTP 179
             SLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICE L K  P
Sbjct:   426 SLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEKLCKVLP 485

Query:   180 KFSSLPSNVGNLIVQAISINSAYTSRIMPPDEPTELPKQVGNKTECALLGFVLALGKNYQ 239
               S +P +VGNLI   IS+NSAYTS IM    P +LP QVGNKTECALLGFV  LG  YQ
Sbjct:   486 TLSDIPQHVGNLITMGISVNSAYTSNIMAGHNPGDLPIQVGNKTECALLGFVQGLGVKYQ 545

Query:   240 TWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQGGGYRLFTKGASEI 284
             + RD+I E+  TRVYTFNSVRKSM TVIPR  GGYRL+TKGASEI
Sbjct:   546 SIRDEITEDKFTRVYTFNSVRKSMGTVIPRPNGGYRLYTKGASEI 590
GO:0005388 "calcium-transporting ATPase activity" evidence=ISS
GO:0005886 "plasma membrane" evidence=ISS;IDA
GO:0046872 "metal ion binding" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0070588 "calcium ion transmembrane transport" evidence=IEA
GO:0006874 "cellular calcium ion homeostasis" evidence=IMP
WB|WBGene00003153 mca-3 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|K7GMU3 LOC100520061 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q16720 ATP2B3 "Plasma membrane calcium-transporting ATPase 3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1LPH4 Atp2b3 "Plasma membrane calcium-transporting ATPase 3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|D4A1Z6 Atp2b4 "Plasma membrane calcium-transporting ATPase 4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|K7GQP7 LOC100520061 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F8WG66 Atp2b3 "Plasma membrane calcium-transporting ATPase 3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|K7GRJ7 LOC100520061 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1NJ71 ATP2B2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q64568AT2B3_RAT3, ., 6, ., 3, ., 80.67330.65690.1963yesN/A
Q16720AT2B3_HUMAN3, ., 6, ., 3, ., 80.65540.68610.2114yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query376
TIGR01517 944 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- 8e-89
COG0474 917 COG0474, MgtA, Cation transport ATPase [Inorganic 1e-41
TIGR01494 543 TIGR01494, ATPase_P-type, ATPase, P-type (transpor 2e-35
TIGR01116 917 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic 7e-24
TIGR01522 884 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- 3e-23
pfam00122222 pfam00122, E1-E2_ATPase, E1-E2 ATPase 3e-20
TIGR01517 944 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- 2e-19
TIGR01106 997 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux 6e-19
pfam1324691 pfam13246, Hydrolase_like2, Putative hydrolase of 2e-18
pfam1324691 pfam13246, Hydrolase_like2, Putative hydrolase of 2e-15
TIGR01647 754 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e 2e-12
TIGR01511572 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans 4e-12
PRK10517 902 PRK10517, PRK10517, magnesium-transporting ATPase 6e-11
TIGR01523 1053 TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu 1e-10
TIGR01525556 TIGR01525, ATPase-IB_hvy, heavy metal translocatin 5e-10
COG2217713 COG2217, ZntA, Cation transport ATPase [Inorganic 4e-09
TIGR01524 867 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating 2e-08
TIGR01512536 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb 3e-08
TIGR01494 543 TIGR01494, ATPase_P-type, ATPase, P-type (transpor 1e-07
TIGR01652 1057 TIGR01652, ATPase-Plipid, phospholipid-translocati 1e-07
COG0474 917 COG0474, MgtA, Cation transport ATPase [Inorganic 2e-07
PRK15122 903 PRK15122, PRK15122, magnesium-transporting ATPase; 1e-05
TIGR01657 1054 TIGR01657, P-ATPase-V, P-type ATPase of unknown pu 4e-05
PRK10671834 PRK10671, copA, copper exporting ATPase; Provision 5e-05
>gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase Back     alignment and domain information 
 Score =  286 bits (734), Expect = 8e-89
 Identities = 122/246 (49%), Positives = 157/246 (63%), Gaps = 10/246 (4%)

Query: 40  EKSVLQAKLTKLAIQIGYAGSTIAVLTVVILVIQFCVKTFVIEDKSWKNTYANEFVRHLI 99
           + + LQ KL++LA  IG  G   AVL  ++L +++  +     D       A  F+ H I
Sbjct: 272 DSTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIR-GDGRDTEEDAQTFLDHFI 330

Query: 100 IGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLT 159
           I VT++VVAVPEGLPLAVT++LAYS+KKMMKDNNLVRHL ACETMG+ATAICSDKTGTLT
Sbjct: 331 IAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLT 390

Query: 160 TNRMTVVQSYICEVLSKTTPKFSSLPSNVGNLIVQAISINS-AYTSRIMPPDEPTELPKQ 218
            N M+VVQ YI E          ++P +V N++V+ IS+NS +         +       
Sbjct: 391 QNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVV-----DRGGKRAF 445

Query: 219 VGNKTECALLGFVLALGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQGGGYRLFT 278
           +G+KTECALL F L L ++YQ  R    EE + ++Y FNS RK MS V+   GG YR F 
Sbjct: 446 IGSKTECALLDFGLLLLRDYQEVR---AEEKVVKIYPFNSERKFMSVVVKHSGGKYREFR 502

Query: 279 KGASEI 284
           KGASEI
Sbjct: 503 KGASEI 508

This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944
>gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC Back     alignment and domain information
>gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase Back     alignment and domain information
>gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit Back     alignment and domain information
>gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit Back     alignment and domain information
>gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit Back     alignment and domain information
>gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase Back     alignment and domain information
>gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional Back     alignment and domain information
>gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type Back     alignment and domain information
>gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC Back     alignment and domain information
>gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase Back     alignment and domain information
>gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional Back     alignment and domain information
>gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) Back     alignment and domain information
>gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 376
KOG0204|consensus 1034 100.0
KOG0202|consensus 972 100.0
COG0474 917 MgtA Cation transport ATPase [Inorganic ion transp 100.0
TIGR01523 1053 ATPase-IID_K-Na potassium and/or sodium efflux P-t 100.0
TIGR01116 917 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium 100.0
PLN03190 1178 aminophospholipid translocase; Provisional 100.0
TIGR01652 1057 ATPase-Plipid phospholipid-translocating P-type AT 100.0
TIGR01106 997 ATPase-IIC_X-K sodium or proton efflux -- potassiu 100.0
TIGR01517 941 ATPase-IIB_Ca plasma-membrane calcium-translocatin 100.0
TIGR01522 884 ATPase-IIA2_Ca golgi membrane calcium-translocatin 100.0
TIGR01657 1054 P-ATPase-V P-type ATPase of unknown pump specifici 100.0
PRK10517 902 magnesium-transporting ATPase MgtA; Provisional 100.0
PRK15122 903 magnesium-transporting ATPase; Provisional 100.0
TIGR01524 867 ATPase-IIIB_Mg magnesium-translocating P-type ATPa 100.0
KOG0206|consensus 1151 100.0
TIGR01647 755 ATPase-IIIA_H plasma-membrane proton-efflux P-type 100.0
KOG0203|consensus 1019 100.0
KOG0210|consensus 1051 100.0
KOG0208|consensus 1140 99.97
PRK01122 679 potassium-transporting ATPase subunit B; Provision 99.97
TIGR01497 675 kdpB K+-transporting ATPase, B subunit. One sequen 99.97
PRK14010 673 potassium-transporting ATPase subunit B; Provision 99.96
TIGR01494499 ATPase_P-type ATPase, P-type (transporting), HAD s 99.96
KOG0205|consensus 942 99.95
TIGR01525 556 ATPase-IB_hvy heavy metal translocating P-type ATP 99.93
PRK11033 741 zntA zinc/cadmium/mercury/lead-transporting ATPase 99.92
KOG0209|consensus 1160 99.92
TIGR01511562 ATPase-IB1_Cu copper-(or silver)-translocating P-t 99.91
TIGR01512536 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo 99.91
PRK10671834 copA copper exporting ATPase; Provisional 99.89
COG2217 713 ZntA Cation transport ATPase [Inorganic ion transp 99.88
KOG0207|consensus 951 99.85
PF1324691 Hydrolase_like2: Putative hydrolase of sodium-pota 99.7
COG2216 681 KdpB High-affinity K+ transport system, ATPase cha 99.67
PF00122230 E1-E2_ATPase: E1-E2 ATPase p-type cation-transport 99.42
PF1324691 Hydrolase_like2: Putative hydrolase of sodium-pota 98.28
KOG0204|consensus 1034 97.79
PF00702215 Hydrolase: haloacid dehalogenase-like hydrolase; I 97.03
COG0474 917 MgtA Cation transport ATPase [Inorganic ion transp 95.46
TIGR01116 917 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium 94.38
TIGR01523 1053 ATPase-IID_K-Na potassium and/or sodium efflux P-t 94.35
KOG0202|consensus 972 94.11
PLN03190 1178 aminophospholipid translocase; Provisional 93.35
TIGR01106 997 ATPase-IIC_X-K sodium or proton efflux -- potassiu 93.21
TIGR01517 941 ATPase-IIB_Ca plasma-membrane calcium-translocatin 91.63
TIGR01652 1057 ATPase-Plipid phospholipid-translocating P-type AT 87.21
>KOG0204|consensus Back     alignment and domain information 
Probab=100.00  E-value=1.9e-56  Score=443.17  Aligned_cols=315  Identities=47%  Similarity=0.695  Sum_probs=280.6

Q ss_pred             eeEEEEEeecCCCccccCC-CcccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheeecCc---cchh
Q psy8074          13 HLANIPVVHEEREPAAEKP-DREDDHKKEKSVLQAKLTKLAIQIGYAGSTIAVLTVVILVIQFCVKTFVIEDK---SWKN   88 (376)
Q Consensus        13 g~~~~~V~~~G~~t~~~~i-~~~~~~~~~~t~l~~~l~~~~~~i~~~~~~~~~~~~i~~~i~~~~~~~~~~~~---~~~~   88 (376)
                      |..+..|++||.+|.+|++ ..+.....++||||-+|++++..|+++++.++++++++++++|+...+.....   .|..
T Consensus       297 GsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~  376 (1034)
T KOG0204|consen  297 GSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSD  376 (1034)
T ss_pred             CcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccH
Confidence            7789999999999999999 55566666999999999999999999999999999999999999988776544   4555


Q ss_pred             hhhHHHHHHHHHHHhhhhhhccCchhHHHHHHHHHHHHHHHhcCceeccchHHhhhcCcceEEccCCCccCCCceEEEEE
Q psy8074          89 TYANEFVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQS  168 (376)
Q Consensus        89 ~~~~~~~~~~~~~~~llv~~iP~~L~~~vti~l~~~~~~~~~~~ilvr~~~~~E~LG~v~~i~~DKTGTLT~n~m~v~~~  168 (376)
                      .....++..|..+++++++++|+|||+++++++++++++|.++|++||++++||+||+.++||+|||||||.|+|+|.+.
T Consensus       377 ~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~  456 (1034)
T KOG0204|consen  377 EYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQS  456 (1034)
T ss_pred             HHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEee
Confidence            66788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCeeeccC-CCCCCCChhhHHHHHHHHHhhhcccccCCCCCCCCCCccccCCccHHHHHHHHHHcCCcchhhcccCcc
Q psy8074         169 YICEVLSKTT-PKFSSLPSNVGNLIVQAISINSAYTSRIMPPDEPTELPKQVGNKTECALLGFVLALGKNYQTWRDDIPE  247 (376)
Q Consensus       169 ~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~al~~~a~~~g~~~~~~~~~~~~  247 (376)
                      |+++..+... ++....++.+.+++..++..|+.  ..+.+++.++....+.|||+|+||++|+.++|.+++.+|.+   
T Consensus       457 ~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~--g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e---  531 (1034)
T KOG0204|consen  457 YIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTT--GSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPE---  531 (1034)
T ss_pred             eeccccccccCcccccCCHHHHHHHHHHHhhcCC--CeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcch---
Confidence            9999988743 33246788899999999998873  33444555555778899999999999999999999999944   


Q ss_pred             ceeeEEecccCCCcceEEEEEcCCCc-EEEEEcCCCCCCCCCCCCCCcccCCcchhhHHHHHHHcCCCcccccccchhhh
Q psy8074         248 EMLTRVYTFNSVRKSMSTVIPRQGGG-YRLFTKGASEIPPDEPTELPKQVGNKTECALLGFVLALGKNYQTWRDDIPEEM  326 (376)
Q Consensus       248 ~~i~~~~pF~s~rK~msvvv~~~~~~-~~l~~KGA~e~il~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~  326 (376)
                      .++++.+||||+||+|+++++.+++. | +|+|||+|+|+.             .|+   ++.+.++...+++++.+..+
T Consensus       532 ~~v~kv~~FNS~kK~~gvvi~~~~~~~y-~~~KGAsEiVL~-------------~C~---~~~~~~g~~~~~~e~~~~~~  594 (1034)
T KOG0204|consen  532 EKVVKVYPFNSVKKRMGVVIKLPDGGHY-VHWKGASEIVLK-------------SCE---YYIDSNGELVPFNEDDRKSF  594 (1034)
T ss_pred             hheeEEeccCcccceeeEEEEcCCCCeE-EEEcChHHHHHH-------------hhh---heECCCCCEeeCCHHHHHHH
Confidence            56789999999999999999988666 6 999999999999             999   99988888999999888877


Q ss_pred             hhheecC--CCCceeeeeeeeccCCeeEEEecC
Q psy8074         327 LTRVYTF--NSVRKSMSTVIPRQGGGYRLFTKG  357 (376)
Q Consensus       327 ~~~~~~~--~glR~~m~~~~~~l~~a~k~~~~g  357 (376)
                      ...+.+|  +|||+        +++|||+|..+
T Consensus       595 ~~~Ie~mA~~~LRt--------i~lAy~df~~~  619 (1034)
T KOG0204|consen  595 KDVIEPMASEGLRT--------ICLAYRDFVAG  619 (1034)
T ss_pred             HHHHHHHHHhhhhe--------eeEEeeccccC
Confidence            7777788  99999        99999998876

>KOG0202|consensus Back     alignment and domain information
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type Back     alignment and domain information
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase Back     alignment and domain information
>PLN03190 aminophospholipid translocase; Provisional Back     alignment and domain information
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase Back     alignment and domain information
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit Back     alignment and domain information
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase Back     alignment and domain information
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase Back     alignment and domain information
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) Back     alignment and domain information
>PRK10517 magnesium-transporting ATPase MgtA; Provisional Back     alignment and domain information
>PRK15122 magnesium-transporting ATPase; Provisional Back     alignment and domain information
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase Back     alignment and domain information
>KOG0206|consensus Back     alignment and domain information
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase Back     alignment and domain information
>KOG0203|consensus Back     alignment and domain information
>KOG0210|consensus Back     alignment and domain information
>KOG0208|consensus Back     alignment and domain information
>PRK01122 potassium-transporting ATPase subunit B; Provisional Back     alignment and domain information
>TIGR01497 kdpB K+-transporting ATPase, B subunit Back     alignment and domain information
>PRK14010 potassium-transporting ATPase subunit B; Provisional Back     alignment and domain information
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC Back     alignment and domain information
>KOG0205|consensus Back     alignment and domain information
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase Back     alignment and domain information
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional Back     alignment and domain information
>KOG0209|consensus Back     alignment and domain information
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase Back     alignment and domain information
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase Back     alignment and domain information
>PRK10671 copA copper exporting ATPase; Provisional Back     alignment and domain information
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0207|consensus Back     alignment and domain information
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit Back     alignment and domain information
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane Back     alignment and domain information
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit Back     alignment and domain information
>KOG0204|consensus Back     alignment and domain information
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) Back     alignment and domain information
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase Back     alignment and domain information
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type Back     alignment and domain information
>KOG0202|consensus Back     alignment and domain information
>PLN03190 aminophospholipid translocase; Provisional Back     alignment and domain information
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit Back     alignment and domain information
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase Back     alignment and domain information
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query376
2zxe_A 1028 Crystal Structure Of The Sodium - Potassium Pump In 2e-14
3ixz_A 1034 Pig Gastric H+K+-Atpase Complexed With Aluminium Fl 2e-14
3b8e_A 998 Crystal Structure Of The Sodium-Potassium Pump Leng 1e-13
2dqs_A 995 Crystal Structure Of The Calcium Pump With Amppcp I 2e-13
1kju_A 994 Ca2+-Atpase In The E2 State Length = 994 2e-13
3tlm_A 992 Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp 5e-13
3n23_A 992 Crystal Structure Of The High Affinity Complex Betw 9e-13
3ba6_A 994 Structure Of The Ca2e1p Phosphoenzyme Intermediate 2e-12
1mhs_A 920 Model Of Neurospora Crassa Proton Atpase Length = 9 9e-09
3b8c_A 885 Crystal Structure Of A Plasma Membrane Proton Pump 6e-07
3rfu_A736 Crystal Structure Of A Copper-Transporting Pib-Type 2e-04
>pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 Back     alignment and structure 
Iteration: 1

 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 6/196 (3%)
Query: 94  FVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSD 153
           ++  +I  + ++V  VPEGL   VT+ L  + K+M + N LV++L+A ET+G+ + ICSD
Sbjct: 322 WLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSD 381
Query: 154 KTGTLTTNRMTVVQSYICEVL--SKTTPKFSSLPSNVGNLIVQAISINSAYTSRIMPPDE 211
           KTGTLT NRMTV   +    +  + TT   S    +  +    A+S  +A  +R +    
Sbjct: 382 KTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAG 441
Query: 212 PTELP----KQVGNKTECALLGFVLALGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVI 267
              +P       G+ +E ALL  +     + Q  RD  P+ +     + N  + S+    
Sbjct: 442 QDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENE 501
Query: 268 PRQGGGYRLFTKGASE 283
                 Y L  KGA E
Sbjct: 502 KSSESRYLLVMKGAPE 517
>pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 Back     alignment and structure
>pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 Back     alignment and structure
>pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 Back     alignment and structure
>pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 Back     alignment and structure
>pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 Back     alignment and structure
>pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 Back     alignment and structure
>pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 Back     alignment and structure
>pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 Back     alignment and structure
>pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 Back     alignment and structure
>pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query376
3ixz_A 1034 Potassium-transporting ATPase alpha; ION pump, H+, 1e-42
3ixz_A 1034 Potassium-transporting ATPase alpha; ION pump, H+, 8e-09
2zxe_A 1028 Na, K-ATPase alpha subunit; membrane protein, ION 1e-41
2zxe_A 1028 Na, K-ATPase alpha subunit; membrane protein, ION 3e-08
3ar4_A 995 Sarcoplasmic/endoplasmic reticulum calcium ATPase; 2e-40
3ar4_A 995 Sarcoplasmic/endoplasmic reticulum calcium ATPase; 4e-07
3b8c_A 885 ATPase 2, plasma membrane-type; P-type ATPase, pro 2e-34
3b8c_A 885 ATPase 2, plasma membrane-type; P-type ATPase, pro 2e-07
1mhs_A 920 Proton pump, plasma membrane ATPase; ION transport 1e-32
1mhs_A 920 Proton pump, plasma membrane ATPase; ION transport 3e-06
3gwi_A170 Magnesium-transporting ATPase, P-type 1; P-type AT 1e-09
3gwi_A170 Magnesium-transporting ATPase, P-type 1; P-type AT 4e-08
3j08_A645 COPA, copper-exporting P-type ATPase A; copper tra 2e-05
3j09_A723 COPA, copper-exporting P-type ATPase A; copper tra 2e-05
3rfu_A736 Copper efflux ATPase; alpha helical, CPC, CXXC, AT 2e-04
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 Back     alignment and structure
 Score =  158 bits (401), Expect = 1e-42
 Identities = 56/260 (21%), Positives = 105/260 (40%), Gaps = 37/260 (14%)

Query: 38  KKEKSVLQAKLTKLAIQIGYAGSTIAVLTVVILVIQFCVKTFVIEDKSWKNTYANEFVRH 97
           + EK+ +  ++      I            ++ +             ++           
Sbjct: 288 ENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCI---------GYTFLRA-------- 330

Query: 98  LIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGT 157
           ++  + ++V  VPEGL   VT+ L+ + K++   N +V++L+A ET+G+ + ICSDKTGT
Sbjct: 331 MVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGT 390

Query: 158 LTTNRMTVV------QSYICEVLSKTTPKFSSLPSNVGNLIVQAISINSAYTSRIMPPDE 211
           LT NRMTV         +  +     + +     S     + + +++ +   +      +
Sbjct: 391 LTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNR--AAFKSGQD 448

Query: 212 --PTELPKQVGNKTECALLGFVLALGKNYQTWRDDIPEEMLTRVYT--FNSVRKSMSTV- 266
             P      +G+ +E ALL F      N   +R+  P     +V    FNS  K   ++ 
Sbjct: 449 AVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFP-----KVCEIPFNSTNKFQLSIH 503

Query: 267 --IPRQGGGYRLFTKGASEI 284
                +   + L  KGA E 
Sbjct: 504 TLEDPRDPRHVLVMKGAPER 523
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 Back     alignment and structure
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 Back     alignment and structure
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 Back     alignment and structure
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 Back     alignment and structure
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 Back     alignment and structure
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 Back     alignment and structure
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 Back     alignment and structure
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 Back     alignment and structure
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 Back     alignment and structure
>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 Back     alignment and structure
>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 Back     alignment and structure
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 Back     alignment and structure
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 Back     alignment and structure
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query376
3ixz_A 1034 Potassium-transporting ATPase alpha; ION pump, H+, 100.0
2zxe_A 1028 Na, K-ATPase alpha subunit; membrane protein, ION 100.0
3ar4_A 995 Sarcoplasmic/endoplasmic reticulum calcium ATPase; 100.0
1mhs_A 920 Proton pump, plasma membrane ATPase; ION transport 100.0
3b8c_A 885 ATPase 2, plasma membrane-type; P-type ATPase, pro 100.0
3rfu_A 736 Copper efflux ATPase; alpha helical, CPC, CXXC, AT 99.94
3j08_A 645 COPA, copper-exporting P-type ATPase A; copper tra 99.92
3j09_A 723 COPA, copper-exporting P-type ATPase A; copper tra 99.91
3gwi_A170 Magnesium-transporting ATPase, P-type 1; P-type AT 99.69
2yj3_A263 Copper-transporting ATPase; hydrolase, P-type ATPa 98.2
3a1c_A287 Probable copper-exporting P-type ATPase A; ATP-bin 98.39
3skx_A280 Copper-exporting P-type ATPase B; P1B-ATPase, ATP 97.24
3gwi_A170 Magnesium-transporting ATPase, P-type 1; P-type AT 95.57
4fe3_A297 Cytosolic 5'-nucleotidase 3; substrate complex, HA 93.03
3ixz_A 1034 Potassium-transporting ATPase alpha; ION pump, H+, 89.6
1svj_A156 Potassium-transporting ATPase B chain; alpha-beta 88.8
2zxe_A 1028 Na, K-ATPase alpha subunit; membrane protein, ION 88.7
3ar4_A 995 Sarcoplasmic/endoplasmic reticulum calcium ATPase; 84.62
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A Back     alignment and structure
Probab=100.00  E-value=6.4e-45  Score=392.51  Aligned_cols=301  Identities=23%  Similarity=0.251  Sum_probs=239.5

Q ss_pred             ceeEEEEEeecCCCccccCC-CcccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheeecCccchhhh
Q psy8074          12 SHLANIPVVHEEREPAAEKP-DREDDHKKEKSVLQAKLTKLAIQIGYAGSTIAVLTVVILVIQFCVKTFVIEDKSWKNTY   90 (376)
Q Consensus        12 ~g~~~~~V~~~G~~t~~~~i-~~~~~~~~~~t~l~~~l~~~~~~i~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~   90 (376)
                      +|.++++|++||.+|.+|+| ......+.++||+|+++++++..+..++++++++++++.++.         +.      
T Consensus       261 ~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---------~~------  325 (1034)
T 3ixz_A          261 EGTAQGLVVNTGDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCI---------GY------  325 (1034)
T ss_pred             eecceEEEEeehhhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------cc------
Confidence            46789999999999999999 888888899999999999999998877776666555433221         11      


Q ss_pred             hHHHHHHHHHHHhhhhhhccCchhHHHHHHHHHHHHHHHhcCceeccchHHhhhcCcceEEccCCCccCCCceEEEEEEe
Q psy8074          91 ANEFVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYI  170 (376)
Q Consensus        91 ~~~~~~~~~~~~~llv~~iP~~L~~~vti~l~~~~~~~~~~~ilvr~~~~~E~LG~v~~i~~DKTGTLT~n~m~v~~~~~  170 (376)
                        .+...+.+++++++++||||||+++++++++++++|+++|++||+++++|+||++++||||||||||+|+|+|+++++
T Consensus       326 --~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~  403 (1034)
T 3ixz_A          326 --TFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWF  403 (1034)
T ss_pred             --hHHHHHHHHHHHHHheeccccHHHHHHHHHHHHHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEE
Confidence              245678889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCeeeccCCCC-------CCCChhhHHHHHHHHHhhhcccccCCCCCCCCCCccccCCccHHHHHHHHHHcCCcchhhcc
Q psy8074         171 CEVLSKTTPKF-------SSLPSNVGNLIVQAISINSAYTSRIMPPDEPTELPKQVGNKTECALLGFVLALGKNYQTWRD  243 (376)
Q Consensus       171 ~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~al~~~a~~~g~~~~~~~~  243 (376)
                      ++..+......       ...++....++..+.+||++..... ....+...+...|||+|.|++.++...+.+....+.
T Consensus       404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~a~~~~~-~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~  482 (1034)
T 3ixz_A          404 DNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSG-QDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRE  482 (1034)
T ss_pred             CCccccccCcccccccccCcCCHHHHHHHHHHHHhccceeccC-cCCCcccCceeccCchHHHHHHHHHHhCCChHHHHH
Confidence            87755432211       1122344566677778887653211 011111234568999999999999988777776666


Q ss_pred             cCccceeeEEecccCCCcceEEEEEcC---CCcEEEEEcCCCCCCCCCCCCCCcccCCcchhhHHHHHHHcCCCcccccc
Q psy8074         244 DIPEEMLTRVYTFNSVRKSMSTVIPRQ---GGGYRLFTKGASEIPPDEPTELPKQVGNKTECALLGFVLALGKNYQTWRD  320 (376)
Q Consensus       244 ~~~~~~i~~~~pF~s~rK~msvvv~~~---~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~  320 (376)
                      .++   .++++||||+||+|+++++.+   ++++++|+|||||.|++             +|+   .... ++...++++
T Consensus       483 ~~~---~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~-------------~c~---~~~~-~~~~~~l~~  542 (1034)
T 3ixz_A          483 RFP---KVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLE-------------RCS---SILI-KGQELPLDE  542 (1034)
T ss_pred             hCc---ceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHH-------------HhH---Hhhc-CCceecCCH
Confidence            654   478999999999999988753   36789999999999999             999   6654 555667777


Q ss_pred             cchhhhhhheecC--CCCceeeeeeeeccCCeeEEEecCc
Q psy8074         321 DIPEEMLTRVYTF--NSVRKSMSTVIPRQGGGYRLFTKGA  358 (376)
Q Consensus       321 ~~~~~~~~~~~~~--~glR~~m~~~~~~l~~a~k~~~~g~  358 (376)
                      +.++.+.+...++  +|+|+        |++|||.+....
T Consensus       543 ~~~~~~~~~~~~~a~~G~Rv--------La~A~~~l~~~~  574 (1034)
T 3ixz_A          543 QWREAFQTAYLSLGGLGERV--------LGFCQLYLSEKD  574 (1034)
T ss_pred             HHHHHHHHHHHHHHhcCcHh--------heEeEEecChhh
Confidence            7777777777777  99999        999999886543
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Back     alignment and structure
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Back     alignment and structure
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Back     alignment and structure
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Back     alignment and structure
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Back     alignment and structure
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Back     alignment and structure
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Back     alignment and structure
>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Back     alignment and structure
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Back     alignment and structure
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Back     alignment and structure
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Back     alignment and structure
>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Back     alignment and structure
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A Back     alignment and structure
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A Back     alignment and structure
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* Back     alignment and structure
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Back     alignment and structure
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 376
d1wpga4472 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP 1e-22
d1qyia_ 380 c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 3e-15
d1qyia_ 380 c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 0.001
d1q3ia_214 d.220.1.1 (A:) Sodium/potassium-transporting ATPas 1e-12
d1q3ia_214 d.220.1.1 (A:) Sodium/potassium-transporting ATPas 6e-11
d1wpga3239 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc 1e-06
d1wpga3239 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc 8e-05
>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Calcium ATPase, transmembrane domain M
superfamily: Calcium ATPase, transmembrane domain M
family: Calcium ATPase, transmembrane domain M
domain: Calcium ATPase, transmembrane domain M
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 96.3 bits (239), Expect = 1e-22
 Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 9/149 (6%)

Query: 33  REDDHKKEKSVLQAKLTKLAIQIGYAGSTIAVLTVVILVIQFCVKTFVIEDKSWKNTYAN 92
                +++K+ LQ KL +   Q+    S I V   +I +  F      +   SW      
Sbjct: 123 EPAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHF---NDPVHGGSWIRG--- 176

Query: 93  EFVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICS 152
             + +  I V + V A+PEGLP  +T  LA   ++M K N +VR L + ET+G A     
Sbjct: 177 -AIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNM 235

Query: 153 DK--TGTLTTNRMTVVQSYICEVLSKTTP 179
            +     +++N   VV  ++   L     
Sbjct: 236 KQFIRYLISSNVGEVVCIFLTAALGLPEA 264
>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 Back     information, alignment and structure
>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 Back     information, alignment and structure
>d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 Back     information, alignment and structure
>d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 Back     information, alignment and structure
>d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 Back     information, alignment and structure
>d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query376
d1q3ia_214 Sodium/potassium-transporting ATPase alpha chain { 99.91
d1wpga3239 Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta 99.84
d1wpga4472 Calcium ATPase, transmembrane domain M {Rabbit (Or 99.41
d1qyia_ 380 Hypothetical protein MW1667 (SA1546) {Staphylococc 98.12
d1q3ia_214 Sodium/potassium-transporting ATPase alpha chain { 97.81
d1wpga3239 Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta 97.53
>d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Metal cation-transporting ATPase, ATP-binding domain N
superfamily: Metal cation-transporting ATPase, ATP-binding domain N
family: Metal cation-transporting ATPase, ATP-binding domain N
domain: Sodium/potassium-transporting ATPase alpha chain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.91  E-value=1e-25  Score=199.15  Aligned_cols=170  Identities=19%  Similarity=0.156  Sum_probs=125.9

Q ss_pred             eEEEEEEecCeeeccCCC-------CCCCChhhHHHHHHHHHhhhcccccCCCCCCCCCCccccCCccHHHHHHHHHHcC
Q psy8074         163 MTVVQSYICEVLSKTTPK-------FSSLPSNVGNLIVQAISINSAYTSRIMPPDEPTELPKQVGNKTECALLGFVLALG  235 (376)
Q Consensus       163 m~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~al~~~a~~~g  235 (376)
                      |+|+++|++++.+.....       ....++.+..++..+++||++..... ........+...|||+|.||+.++.+.|
T Consensus         2 MTV~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lcn~a~~~~~-~~~~~~~~~~~~GdptE~ALl~~a~~~~   80 (214)
T d1q3ia_           2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAG-QENISVSKRDTAGDASESALLKCIELSC   80 (214)
T ss_dssp             CEEEEEEETTEEEECCCC------CCCCCSHHHHHHHHHHHHSCCCCCC-----------CCCCSCHHHHHHHHHHHHHH
T ss_pred             eEEEEEEECCEEEEcCCCCcCCCcccccCCHHHHHHHHHHHHhCCCccccC-CCCCcccccccccChHHHHHHHHHHHhC
Confidence            999999999998754321       22334556667777888987753211 1111122345689999999999999999


Q ss_pred             CcchhhcccCccceeeEEecccCCCcceEEEEEcC--CCcEEEEEcCCCCCCCCCCCCCCcccCCcchhhHHHHHHHcCC
Q psy8074         236 KNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQ--GGGYRLFTKGASEIPPDEPTELPKQVGNKTECALLGFVLALGK  313 (376)
Q Consensus       236 ~~~~~~~~~~~~~~i~~~~pF~s~rK~msvvv~~~--~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~c~~~~~~~~~~~  313 (376)
                      .++..++..+++   ++++||||+||||+++++.+  ++.+++|+|||||+|++             +|+   +++. ++
T Consensus        81 ~~~~~~r~~~~~---v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~-------------~C~---~~~~-~g  140 (214)
T d1q3ia_          81 GSVRKMRDRNPK---VAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILD-------------RCS---SILV-QG  140 (214)
T ss_dssp             SCHHHHHHTSCE---EEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHH-------------TEE---EEEE-TT
T ss_pred             CCHHHHHhhCcE---eeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHH-------------hhh---heee-CC
Confidence            999988888664   78999999999999999875  45689999999999999             999   6654 66


Q ss_pred             CcccccccchhhhhhheecC--CCCceeeeeeeeccCCeeEEEecCchHH
Q psy8074         314 NYQTWRDDIPEEMLTRVYTF--NSVRKSMSTVIPRQGGGYRLFTKGASEI  361 (376)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~--~glR~~m~~~~~~l~~a~k~~~~g~~~~  361 (376)
                      ...+++++.++.+.+.+.+|  +|+||        |++|||.++.+.+..
T Consensus       141 ~~~~l~~~~~~~i~~~~~~~a~~GlRv--------La~A~k~l~~~~~~~  182 (214)
T d1q3ia_         141 KEIPLDKEMQDAFQNAYLELGGLGERV--------LGFCQLNLPSGKFPR  182 (214)
T ss_dssp             EEEECCHHHHHHHHHHHHHHHHTTCEE--------EEEEEEEECTTTSCT
T ss_pred             ceeechHHHHHHHHHHHHHHhhCCcEE--------EEEEEEecCcccccc
Confidence            78889998899988888888  99999        999999998776543
>d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure