Psyllid ID: psy8179

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80----
Protein Sequence
MLSEMSDELLKNSNDKNGEPSVIWDKLDKEDDAEDIIWDDDTPSPIQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLRF
Secondary Structure (PSIPRED)
cHHHHHHHHHccccccccccEEEEcccccccccccccccccccccHHHHHcccEEEEEccHHHHHHHHHHHHHHHcccccEEEc
Secondary Structure Prediction (SSPRO)
cccHcHHHHHccccccccccEEEEccccccccHHHccccccccccHHHHHcccEEEEEcccHHHHHHHHHHHHHHcccccEccc
Coil and Loop (DISEMBL)
MLSEMSDELLknsndkngepsviwdkldkeddaediiwdddtpspiqefykdqtVFITGATGFLGSLLVEKLLRCCpqmlslrf
Flexible Loop (DISEMBL)
MLSEMSDELLknsndkngepsviWDKLDKEDDAEDIIWDDDTPSPIQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLRF
Low Complexity Region (SEG)
MLSEMSDELLKNSNDKNGEPSVIWDKLdkeddaediiwdddTPSPIQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLRF
Disordered region (IsUnstruct)
**********************IWDK******AEDIIWDDDTPSPIQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQML****
Disordered Region (DISOPRED)
******D*****************************************FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLRF
Disordered Region (DISEMBL)
MLSEMSDELLKNSNDKNGEPSVIWDKLDKEDDAEDIIWDDDTPSPIQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLRF
Disordered Region (DISPRO)
******DEL*KNS***NGEPSVIWDKLDKEDDAEDIIWDDDTPSPIQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLRF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLSEMSDELLKNSNDKNGEPSVIWDKLDKEDDAEDIIWDDDTPSPIQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLRF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	84	2.2.26 [Sep-21-2011]
A1ZAI5	625	Putative fatty acyl-CoA r	yes	N/A	0.488	0.065	0.585	9e-09
Q7ZXF5	515	Fatty acyl-CoA reductase	N/A	N/A	0.380	0.062	0.656	2e-06
Q5R834	515	Fatty acyl-CoA reductase	yes	N/A	0.440	0.071	0.567	3e-06
Q8WVX9	515	Fatty acyl-CoA reductase	yes	N/A	0.440	0.071	0.567	3e-06
Q66H50	515	Fatty acyl-CoA reductase	yes	N/A	0.440	0.071	0.540	5e-06
Q922J9	515	Fatty acyl-CoA reductase	yes	N/A	0.440	0.071	0.540	5e-06
Q960W6	516	Putative fatty acyl-CoA r	no	N/A	0.464	0.075	0.589	5e-06
Q5ZM72	515	Fatty acyl-CoA reductase	yes	N/A	0.404	0.066	0.558	7e-06
Q7TNT2	515	Fatty acyl-CoA reductase	no	N/A	0.428	0.069	0.527	6e-05
Q96K12	515	Fatty acyl-CoA reductase	no	N/A	0.428	0.069	0.527	0.0002

>sp|A1ZAI5|FACR1_DROME Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster GN=CG5065 PE=3 SV=1

 Score = 58.9 bits (141), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/41 (58%), Positives = 32/41 (78%)

Query: 39  DDDTPSPIQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQM 79
           DD +  PI +FY  ++VFITG TGF+G +LVEKLLR CP++
Sbjct: 112 DDTSYVPIAQFYAGRSVFITGGTGFMGKVLVEKLLRSCPEI 152

Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols.
Drosophila melanogaster (taxid: 7227)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: nEC: 2

>sp|Q7ZXF5|FACR1_XENLA Fatty acyl-CoA reductase 1 OS=Xenopus laevis GN=far1 PE=2 SV=1

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/32 (65%), Positives = 26/32 (81%)

Query: 46 IQEFYKDQTVFITGATGFLGSLLVEKLLRCCP 77
          I EFY+ + V ITGATGF+G +L+EKLLR CP
Sbjct: 4  IPEFYQGKNVLITGATGFMGKVLLEKLLRSCP 35

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Xenopus laevis (taxid: 8355)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q5R834|FACR1_PONAB Fatty acyl-CoA reductase 1 OS=Pongo abelii GN=FAR1 PE=2 SV=1

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/37 (56%), Positives = 30/37 (81%)

Query: 46 IQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL 82
          I E+Y+ + V +TGATGFLG +L+EKLLR CP++ S+
Sbjct: 4  IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSV 40

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q8WVX9|FACR1_HUMAN Fatty acyl-CoA reductase 1 OS=Homo sapiens GN=FAR1 PE=1 SV=1

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/37 (56%), Positives = 30/37 (81%)

Query: 46 IQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL 82
          I E+Y+ + V +TGATGFLG +L+EKLLR CP++ S+
Sbjct: 4  IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSV 40

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q66H50|FACR1_RAT Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1

 Score = 50.1 bits (118), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/37 (54%), Positives = 30/37 (81%)

Query: 46 IQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL 82
          I E+Y+ + + +TGATGFLG +L+EKLLR CP++ S+
Sbjct: 4  IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSV 40

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q922J9|FACR1_MOUSE Fatty acyl-CoA reductase 1 OS=Mus musculus GN=Far1 PE=1 SV=1

 Score = 50.1 bits (118), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/37 (54%), Positives = 30/37 (81%)

Query: 46 IQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL 82
          I E+Y+ + + +TGATGFLG +L+EKLLR CP++ S+
Sbjct: 4  IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPRVNSV 40

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q960W6|FACR3_DROME Putative fatty acyl-CoA reductase CG8306 OS=Drosophila melanogaster GN=CG8306 PE=2 SV=1

 Score = 49.7 bits (117), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/39 (58%), Positives = 29/39 (74%)

Query: 44 SPIQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL 82
          SPI +FY  + VFITGATGF+G  +VEKLLR  P + +L
Sbjct: 4  SPITDFYAGRNVFITGATGFVGVTIVEKLLRDVPNVGTL 42

Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols.

Drosophila melanogaster (taxid: 7227)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q5ZM72|FACR1_CHICK Fatty acyl-CoA reductase 1 OS=Gallus gallus GN=FAR1 PE=2 SV=1

 Score = 49.3 bits (116), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/34 (55%), Positives = 28/34 (82%)

Query: 46 IQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQM 79
          I E+Y+ + V +TGATGF+G +L+EKLLR CP++
Sbjct: 4  IPEYYEGKNVLLTGATGFMGKVLLEKLLRSCPKV 37

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q7TNT2|FACR2_MOUSE Fatty acyl-CoA reductase 2 OS=Mus musculus GN=Far2 PE=2 SV=1

 Score = 46.2 bits (108), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/36 (52%), Positives = 26/36 (72%)

Query: 44 SPIQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQM 79
          S I  FY ++++ ITGATGFLG +L+EKL R  P +
Sbjct: 2  SMIAAFYSNKSILITGATGFLGKVLMEKLFRTSPHL 37

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q96K12|FACR2_HUMAN Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2 PE=2 SV=1

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/36 (52%), Positives = 25/36 (69%)

Query: 44 SPIQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQM 79
          S I  FY  +++ ITGATGFLG +L+EKL R  P +
Sbjct: 2  STIAAFYGGKSILITGATGFLGKVLMEKLFRTSPDL 37

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	84
350420565	549	PREDICTED: putative fatty acyl-CoA reduc	0.571	0.087	0.562	3e-08
322803051	530	hypothetical protein SINV_00151 [Solenop	0.464	0.073	0.666	4e-08
340709736	583	PREDICTED: putative fatty acyl-CoA reduc	0.547	0.078	0.586	4e-08
332030738	537	Putative fatty acyl-CoA reductase [Acrom	0.464	0.072	0.666	4e-08
242017466	505	conserved hypothetical protein [Pediculu	0.583	0.097	0.530	4e-08
307176419	541	Fatty acyl-CoA reductase 1 [Camponotus f	0.464	0.072	0.666	5e-08
300116409	541	uncharacterized protein LOC411983 [Apis	0.571	0.088	0.541	5e-08
332026208	223	Putative fatty acyl-CoA reductase [Acrom	0.452	0.170	0.657	7e-08
357615738	526	fatty-acyl CoA reductase 4 [Danaus plexi	0.452	0.072	0.666	8e-08
307207067	541	Fatty acyl-CoA reductase 1 [Harpegnathos	0.464	0.072	0.666	9e-08

>gi|350420565|ref|XP_003492550.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Bombus impatiens]

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/48 (56%), Positives = 35/48 (72%)

Query: 30 EDDAEDIIWDDDTPSPIQEFYKDQTVFITGATGFLGSLLVEKLLRCCP 77
          + D  D+I +    SPIQ+FY  Q++FITG TGF+G LL+EKLLR CP
Sbjct: 32 QSDRCDLILEQSNLSPIQQFYNGQSIFITGGTGFVGKLLIEKLLRECP 79

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322803051|gb|EFZ23139.1| hypothetical protein SINV_00151 [Solenopsis invicta]

 Score = 62.4 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/39 (66%), Positives = 32/39 (82%)

Query: 44 SPIQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL 82
          SPIQEFY  QT+FITG TGF+G LL+EK+LR CP + S+
Sbjct: 37 SPIQEFYYGQTIFITGGTGFMGKLLIEKILRTCPGVTSI 75

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340709736|ref|XP_003393458.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Bombus terrestris]

 Score = 62.4 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/46 (58%), Positives = 34/46 (73%)

Query: 32  DAEDIIWDDDTPSPIQEFYKDQTVFITGATGFLGSLLVEKLLRCCP 77
           D  D+I +    SPIQ+FY  Q++FITG TGF+G LL+EKLLR CP
Sbjct: 68  DRCDLILEQSNLSPIQQFYNGQSIFITGGTGFVGKLLIEKLLRECP 113

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332030738|gb|EGI70414.1| Putative fatty acyl-CoA reductase [Acromyrmex echinatior]

 Score = 62.4 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/39 (66%), Positives = 32/39 (82%)

Query: 44 SPIQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL 82
          SPIQEFY  Q++FITG TGF+G LL+EKLLR CP + S+
Sbjct: 37 SPIQEFYNGQSIFITGGTGFMGKLLIEKLLRTCPGVTSI 75

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242017466|ref|XP_002429209.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212514098|gb|EEB16471.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score = 62.4 bits (150), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/49 (53%), Positives = 39/49 (79%)

Query: 34 EDIIWDDDTPSPIQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL 82
          E++I D   PS IQ+FY++ T+ +TGATGFLG +L+EKLLR CP++ ++
Sbjct: 18 EELIKDSLQPSEIQKFYENSTILLTGATGFLGKILLEKLLRSCPKIKTI 66

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307176419|gb|EFN65993.1| Fatty acyl-CoA reductase 1 [Camponotus floridanus]

 Score = 62.0 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/39 (66%), Positives = 32/39 (82%)

Query: 44 SPIQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL 82
          SPIQEFY  Q++FITG TGF+G LL+EKLLR CP + S+
Sbjct: 43 SPIQEFYYGQSIFITGGTGFMGKLLIEKLLRTCPGVASI 81

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|300116409|ref|NP_001177849.1| uncharacterized protein LOC411983 [Apis mellifera] gi|298569767|gb|ADI87412.1| putative fatty acyl-CoA reductase [Apis mellifera]

 Score = 62.0 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/48 (54%), Positives = 35/48 (72%)

Query: 30 EDDAEDIIWDDDTPSPIQEFYKDQTVFITGATGFLGSLLVEKLLRCCP 77
          E D  D+I +  + SPIQ FY  Q++F+TG TGF+G +L+EKLLR CP
Sbjct: 32 ESDRCDLILEKSSLSPIQNFYNGQSIFVTGGTGFMGKILIEKLLRECP 79

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332026208|gb|EGI66350.1| Putative fatty acyl-CoA reductase [Acromyrmex echinatior]

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 25/38 (65%), Positives = 30/38 (78%)

Query: 40 DDTPSPIQEFYKDQTVFITGATGFLGSLLVEKLLRCCP 77
          D   +PIQ+FY D T+FITG TGFLG +L+EKLLR CP
Sbjct: 5  DRYRTPIQDFYADTTIFITGGTGFLGKMLIEKLLRSCP 42

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357615738|gb|EHJ69811.1| fatty-acyl CoA reductase 4 [Danaus plexippus]

 Score = 61.2 bits (147), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)

Query: 42  TPS-PIQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQM 79
           TPS  + EFYK++T+F+TG TGFLG +LVEKLLRCCP +
Sbjct: 63  TPSIGVAEFYKNKTIFVTGGTGFLGKVLVEKLLRCCPDL 101

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307207067|gb|EFN84876.1| Fatty acyl-CoA reductase 1 [Harpegnathos saltator]

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/39 (66%), Positives = 32/39 (82%)

Query: 44 SPIQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL 82
          SP+QEFY  Q+VFITG TGF+G LL+EKLLR CP + S+
Sbjct: 42 SPVQEFYNGQSVFITGGTGFMGKLLIEKLLRDCPGIASI 80

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	84
FB|FBgn0043792	506	CG30427 [Drosophila melanogast	0.392	0.065	0.666	1.2e-07
FB|FBgn0034145	625	CG5065 [Drosophila melanogaste	0.452	0.060	0.578	4.5e-07
UNIPROTKB|E9PNW8	335	FAR1 "Fatty acyl-CoA reductase	0.440	0.110	0.567	2.6e-06
FB|FBgn0038451	510	CG14893 [Drosophila melanogast	0.345	0.056	0.724	5.1e-06
UNIPROTKB|E2R4R9	514	FAR1 "Uncharacterized protein"	0.440	0.071	0.567	5.2e-06
UNIPROTKB|A5PJQ0	515	FAR1 "Uncharacterized protein"	0.440	0.071	0.567	5.2e-06
UNIPROTKB|Q8WVX9	515	FAR1 "Fatty acyl-CoA reductase	0.440	0.071	0.567	5.2e-06
FB|FBgn0029821	494	CG4020 [Drosophila melanogaste	0.404	0.068	0.558	6.2e-06
UNIPROTKB|G8ENM4	515	FAR1 "Uncharacterized protein"	0.440	0.071	0.540	6.6e-06
MGI|MGI:1914670	515	Far1 "fatty acyl CoA reductase	0.440	0.071	0.540	6.6e-06

FB|FBgn0043792 CG30427 [Drosophila melanogaster (taxid:7227)]

 Score = 130 (50.8 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 22/33 (66%), Positives = 30/33 (90%)

Query:    44 SPIQEFYKDQTVFITGATGFLGSLLVEKLLRCC 76
             SP+QE+YKD+T+FITGA+GF+G +L+EKLL  C
Sbjct:     6 SPVQEYYKDKTIFITGASGFMGKVLLEKLLYSC 38

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006911 "phagocytosis, engulfment" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

FB|FBgn0034145 CG5065 [Drosophila melanogaster (taxid:7227)]

 Score = 126 (49.4 bits), Expect = 4.5e-07, P = 4.5e-07
 Identities = 22/38 (57%), Positives = 31/38 (81%)

Query:    45 PIQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL 82
             PI +FY  ++VFITG TGF+G +LVEKLLR CP++ ++
Sbjct:   118 PIAQFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNI 155

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|E9PNW8 FAR1 "Fatty acyl-CoA reductase 1" [Homo sapiens (taxid:9606)]

 Score = 115 (45.5 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 21/37 (56%), Positives = 30/37 (81%)

Query:    46 IQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL 82
             I E+Y+ + V +TGATGFLG +L+EKLLR CP++ S+
Sbjct:     4 IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSV 40

GO:0000166 "nucleotide binding" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

FB|FBgn0038451 CG14893 [Drosophila melanogaster (taxid:7227)]

 Score = 115 (45.5 bits), Expect = 5.1e-06, P = 5.1e-06
 Identities = 21/29 (72%), Positives = 26/29 (89%)

Query:    46 IQEFYKDQTVFITGATGFLGSLLVEKLLR 74
             IQ FYKD+ VF+TGATGFLG +++EKLLR
Sbjct:    16 IQGFYKDKVVFLTGATGFLGKVIIEKLLR 44

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|E2R4R9 FAR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 115 (45.5 bits), Expect = 5.2e-06, P = 5.2e-06
 Identities = 21/37 (56%), Positives = 30/37 (81%)

Query:    46 IQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL 82
             I E+Y+ + V +TGATGFLG +L+EKLLR CP++ S+
Sbjct:     4 IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSV 40

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|A5PJQ0 FAR1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 115 (45.5 bits), Expect = 5.2e-06, P = 5.2e-06
 Identities = 21/37 (56%), Positives = 30/37 (81%)

Query:    46 IQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL 82
             I E+Y+ + V +TGATGFLG +L+EKLLR CP++ S+
Sbjct:     4 IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSV 40

GO:0050062 "long-chain-fatty-acyl-CoA reductase activity" evidence=IEA

GO:0046474 "glycerophospholipid biosynthetic process" evidence=IEA

GO:0035336 "long-chain fatty-acyl-CoA metabolic process" evidence=IEA

GO:0010025 "wax biosynthetic process" evidence=IEA

GO:0008611 "ether lipid biosynthetic process" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q8WVX9 FAR1 "Fatty acyl-CoA reductase 1" [Homo sapiens (taxid:9606)]

 Score = 115 (45.5 bits), Expect = 5.2e-06, P = 5.2e-06
 Identities = 21/37 (56%), Positives = 30/37 (81%)

Query:    46 IQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL 82
             I E+Y+ + V +TGATGFLG +L+EKLLR CP++ S+
Sbjct:     4 IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSV 40

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0010025 "wax biosynthetic process" evidence=IEA

GO:0050062 "long-chain-fatty-acyl-CoA reductase activity" evidence=IEA

GO:0046474 "glycerophospholipid biosynthetic process" evidence=IDA

GO:0008611 "ether lipid biosynthetic process" evidence=IMP;TAS

GO:0005777 "peroxisome" evidence=IDA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IDA

GO:0005778 "peroxisomal membrane" evidence=IDA

GO:0035336 "long-chain fatty-acyl-CoA metabolic process" evidence=IDA

GO:0005782 "peroxisomal matrix" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

FB|FBgn0029821 CG4020 [Drosophila melanogaster (taxid:7227)]

 Score = 114 (45.2 bits), Expect = 6.2e-06, P = 6.2e-06
 Identities = 19/34 (55%), Positives = 28/34 (82%)

Query:    46 IQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQM 79
             I E ++DQ +F+TGA+GF+G  L+EKLLR CP++
Sbjct:     3 IPEAFEDQEIFVTGASGFVGKALIEKLLRSCPKL 36

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|G8ENM4 FAR1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 114 (45.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 20/37 (54%), Positives = 30/37 (81%)

Query:    46 IQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL 82
             I E+Y+ + + +TGATGFLG +L+EKLLR CP++ S+
Sbjct:     4 IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSV 40

GO:0050062 "long-chain-fatty-acyl-CoA reductase activity" evidence=IEA

GO:0046474 "glycerophospholipid biosynthetic process" evidence=IEA

GO:0035336 "long-chain fatty-acyl-CoA metabolic process" evidence=IEA

GO:0010025 "wax biosynthetic process" evidence=IEA

GO:0008611 "ether lipid biosynthetic process" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

MGI|MGI:1914670 Far1 "fatty acyl CoA reductase 1" [Mus musculus (taxid:10090)]

 Score = 114 (45.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 20/37 (54%), Positives = 30/37 (81%)

Query:    46 IQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL 82
             I E+Y+ + + +TGATGFLG +L+EKLLR CP++ S+
Sbjct:     4 IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPRVNSV 40

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005777 "peroxisome" evidence=ISO;IDA

GO:0005778 "peroxisomal membrane" evidence=ISO

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008611 "ether lipid biosynthetic process" evidence=ISO

GO:0010025 "wax biosynthetic process" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0035336 "long-chain fatty-acyl-CoA metabolic process" evidence=ISO

GO:0046474 "glycerophospholipid biosynthetic process" evidence=ISO

GO:0050062 "long-chain-fatty-acyl-CoA reductase activity" evidence=IDA

GO:0055114 "oxidation-reduction process" evidence=IDA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A1ZAI5	FACR1_DROME	1, ., 2, ., 1, ., n, 2	0.5853	0.4880	0.0656	yes	N/A
Q66H50	FACR1_RAT	1, ., 2, ., 1, ., n, 2	0.5405	0.4404	0.0718	yes	N/A
Q5R834	FACR1_PONAB	1, ., 2, ., 1, ., n, 2	0.5675	0.4404	0.0718	yes	N/A
Q922J9	FACR1_MOUSE	1, ., 2, ., 1, ., n, 2	0.5405	0.4404	0.0718	yes	N/A
Q5ZM72	FACR1_CHICK	1, ., 2, ., 1, ., n, 2	0.5588	0.4047	0.0660	yes	N/A
Q8WVX9	FACR1_HUMAN	1, ., 2, ., 1, ., n, 2	0.5675	0.4404	0.0718	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	84
cd05236	320	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F	2e-09
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	3e-08
cd08946	200	cd08946, SDR_e, extended (e) SDRs	3e-06
PLN02996	491	PLN02996, PLN02996, fatty acyl-CoA reductase	5e-06
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	6e-06
PLN02503	605	PLN02503, PLN02503, fatty acyl-CoA reductase 2	9e-06
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	2e-05
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	4e-05
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	6e-05
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	7e-05
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	8e-05
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	8e-05
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	1e-04
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	1e-04
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	2e-04
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	2e-04
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	4e-04
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	4e-04
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	6e-04
TIGR03443	1389	TIGR03443, alpha_am_amid, L-aminoadipate-semialdeh	6e-04
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	7e-04
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	0.001
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	0.001
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	0.001
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	0.001
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	0.001
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	0.003
TIGR02622	349	TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra	0.004

>gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs

 Score = 51.9 bits (125), Expect = 2e-09
 Identities = 18/24 (75%), Positives = 21/24 (87%)

Query: 54 TVFITGATGFLGSLLVEKLLRCCP 77
          +V ITGATGFLG +L+EKLLR CP
Sbjct: 2  SVLITGATGFLGKVLLEKLLRSCP 25

SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 48.4 bits (116), Expect = 3e-08
 Identities = 15/21 (71%), Positives = 18/21 (85%)

Query: 57 ITGATGFLGSLLVEKLLRCCP 77
          +TGATGFLG +L+EKLLR  P
Sbjct: 1  LTGATGFLGKVLLEKLLRSTP 21

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 42.7 bits (101), Expect = 3e-06
 Identities = 10/20 (50%), Positives = 14/20 (70%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          + +TG  GF+GS LV +LL 
Sbjct: 1  ILVTGGAGFIGSHLVRRLLE 20

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase

 Score = 42.0 bits (99), Expect = 5e-06
 Identities = 15/31 (48%), Positives = 23/31 (74%)

Query: 48 EFYKDQTVFITGATGFLGSLLVEKLLRCCPQ 78
          +F +++T+ +TGATGFL  + VEK+LR  P 
Sbjct: 7  QFLENKTILVTGATGFLAKIFVEKILRVQPN 37

Length = 491

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 41.9 bits (99), Expect = 6e-06
 Identities = 13/20 (65%), Positives = 15/20 (75%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          + +TGATGFLGS LV  LL 
Sbjct: 1  ILVTGATGFLGSNLVRALLA 20

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2

 Score = 41.4 bits (97), Expect = 9e-06
 Identities = 17/32 (53%), Positives = 22/32 (68%)

Query: 46  IQEFYKDQTVFITGATGFLGSLLVEKLLRCCP 77
           I EF + +   ITGATGFL  +L+EK+LR  P
Sbjct: 113 IAEFLRGKNFLITGATGFLAKVLIEKILRTNP 144

Length = 605

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 44  SPIQEFYKDQTVFITGATGFLGSLLVEKLLRCCP 77
             I      +TV +TG  G +GS L  ++L+  P
Sbjct: 242 ELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNP 275

Length = 588

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 39.6 bits (93), Expect = 4e-05
 Identities = 13/22 (59%), Positives = 18/22 (81%)

Query: 54 TVFITGATGFLGSLLVEKLLRC 75
          TV +TGATGFLG+ L+ +LL+ 
Sbjct: 1  TVLLTGATGFLGAYLLRELLKR 22

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 38.9 bits (91), Expect = 6e-05
 Identities = 12/19 (63%), Positives = 17/19 (89%)

Query: 55 VFITGATGFLGSLLVEKLL 73
          VF+TGATGF+GS +V +L+
Sbjct: 3  VFVTGATGFIGSAVVRELV 21

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 38.8 bits (91), Expect = 7e-05
 Identities = 12/30 (40%), Positives = 20/30 (66%)

Query: 51 KDQTVFITGATGFLGSLLVEKLLRCCPQML 80
          K +T+ +TG  G +GS LV ++L+  P+ L
Sbjct: 1  KGKTILVTGGAGSIGSELVRQILKFGPKKL 30

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 38.8 bits (90), Expect = 8e-05
 Identities = 11/20 (55%), Positives = 15/20 (75%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          + +TG  GF+GS LVE+LL 
Sbjct: 3  ILVTGGAGFIGSHLVERLLA 22

Length = 314

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 38.5 bits (90), Expect = 8e-05
 Identities = 13/20 (65%), Positives = 16/20 (80%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          VF+TG TGFLG  LV++LL 
Sbjct: 1  VFVTGGTGFLGRHLVKRLLE 20

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 38.5 bits (90), Expect = 1e-04
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 49 FYKDQTVFITGATGFLGSLLVEKLL 73
          F++ + V +TG TGF GS L   L 
Sbjct: 1  FWQGKRVLVTGHTGFKGSWLSLWLQ 25

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 38.2 bits (89), Expect = 1e-04
 Identities = 15/21 (71%), Positives = 19/21 (90%)

Query: 54 TVFITGATGFLGSLLVEKLLR 74
          TV +TGATGFLG+ L+E+LLR
Sbjct: 1  TVLLTGATGFLGAYLLEELLR 21

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 37.8 bits (88), Expect = 2e-04
 Identities = 12/21 (57%), Positives = 16/21 (76%)

Query: 54 TVFITGATGFLGSLLVEKLLR 74
           V +TGATGFLG+ L+ +LL 
Sbjct: 2  NVLLTGATGFLGAYLLLELLD 22

Length = 382

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 11/20 (55%), Positives = 14/20 (70%)

Query: 54 TVFITGATGFLGSLLVEKLL 73
            F+TG TGF+G  LV +LL
Sbjct: 2  RYFVTGGTGFIGRRLVSRLL 21

Length = 657

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 36.5 bits (85), Expect = 4e-04
 Identities = 12/21 (57%), Positives = 17/21 (80%)

Query: 54 TVFITGATGFLGSLLVEKLLR 74
           V +TGATGF+ S +VE+LL+
Sbjct: 1  LVLVTGATGFIASHIVEQLLK 21

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 36.5 bits (85), Expect = 4e-04
 Identities = 11/20 (55%), Positives = 16/20 (80%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          + +TG TGF+GS LV +LL+
Sbjct: 1  ILVTGGTGFIGSHLVRRLLQ 20

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 35.8 bits (83), Expect = 6e-04
 Identities = 10/20 (50%), Positives = 13/20 (65%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          + I GATGF+G  L  +LL 
Sbjct: 1  ILILGATGFIGRALARELLE 20

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|234212 TIGR03443, alpha_am_amid, L-aminoadipate-semialdehyde dehydrogenase

 Score = 36.2 bits (84), Expect = 6e-04
 Identities = 14/23 (60%), Positives = 17/23 (73%)

Query: 51  KDQTVFITGATGFLGSLLVEKLL 73
              TVF+TGATGFLGS ++  LL
Sbjct: 970 TPITVFLTGATGFLGSFILRDLL 992

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. Length = 1389

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 36.1 bits (84), Expect = 7e-04
 Identities = 13/20 (65%), Positives = 16/20 (80%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          V +TGA GF+GS LVE L+R
Sbjct: 1  VLVTGADGFIGSHLVEALVR 20

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 35.4 bits (82), Expect = 0.001
 Identities = 13/21 (61%), Positives = 16/21 (76%)

Query: 54 TVFITGATGFLGSLLVEKLLR 74
           V +TGA GF+GS L E+LLR
Sbjct: 1  NVLVTGADGFIGSHLTERLLR 21

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score = 35.3 bits (82), Expect = 0.001
 Identities = 11/22 (50%), Positives = 15/22 (68%)

Query: 53 QTVFITGATGFLGSLLVEKLLR 74
          + + ITG  GFLGS L ++LL 
Sbjct: 1  KRILITGGAGFLGSHLCDRLLE 22

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 35.3 bits (81), Expect = 0.001
 Identities = 10/20 (50%), Positives = 15/20 (75%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          + +TGATGF+G  +V +LL 
Sbjct: 3  ILVTGATGFVGGAVVRELLA 22

Length = 275

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 34.9 bits (81), Expect = 0.001
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 54 TVFITGATGFLGSLLVEKLLR 74
           V + GATG +G  +V +LL 
Sbjct: 1  KVLVVGATGKVGRHVVRELLD 21

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 35.0 bits (81), Expect = 0.001
 Identities = 12/20 (60%), Positives = 15/20 (75%)

Query: 54 TVFITGATGFLGSLLVEKLL 73
           V +TGATGF+GS +V  LL
Sbjct: 2  KVLVTGATGFVGSAVVRLLL 21

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score = 34.5 bits (80), Expect = 0.003
 Identities = 11/21 (52%), Positives = 11/21 (52%)

Query: 54 TVFITGATGFLGSLLVEKLLR 74
             ITG TG  GS L E LL 
Sbjct: 1  RALITGITGQDGSYLAEFLLE 21

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase

 Score = 33.8 bits (78), Expect = 0.004
 Identities = 10/21 (47%), Positives = 14/21 (66%)

Query: 49 FYKDQTVFITGATGFLGSLLV 69
          F++ + V +TG TGF GS L 
Sbjct: 1  FWQGKKVLVTGHTGFKGSWLS 21

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	84
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	98.75
KOG1502|consensus	327		98.65
PLN02996	491	fatty acyl-CoA reductase	98.63
PLN02503	605	fatty acyl-CoA reductase 2	98.5
PLN02572	442	UDP-sulfoquinovose synthase	98.5
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	98.48
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	98.48
PLN02206	442	UDP-glucuronate decarboxylase	98.41
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	98.4
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	98.39
CHL00194	317	ycf39 Ycf39; Provisional	98.38
PLN02166	436	dTDP-glucose 4,6-dehydratase	98.37
PLN00198	338	anthocyanidin reductase; Provisional	98.37
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	98.36
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	98.35
PLN02427	386	UDP-apiose/xylose synthase	98.34
PLN02583	297	cinnamoyl-CoA reductase	98.3
PLN02653	340	GDP-mannose 4,6-dehydratase	98.3
PLN02695	370	GDP-D-mannose-3',5'-epimerase	98.29
PLN02650	351	dihydroflavonol-4-reductase	98.28
PLN02778	298	3,5-epimerase/4-reductase	98.28
KOG1221|consensus	467		98.27
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	98.26
PLN02214	342	cinnamoyl-CoA reductase	98.26
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	98.25
PLN02896	353	cinnamyl-alcohol dehydrogenase	98.24
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	98.24
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	98.23
PLN02686	367	cinnamoyl-CoA reductase	98.23
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	98.21
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	98.19
KOG1429|consensus	350		98.19
PLN02240	352	UDP-glucose 4-epimerase	98.19
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	98.18
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	98.14
PRK10675	338	UDP-galactose-4-epimerase; Provisional	98.13
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.12
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.11
PLN02260	668	probable rhamnose biosynthetic enzyme	98.1
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	98.03
KOG1371|consensus	343		98.03
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	98.02
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	98.01
PRK09135	249	pteridine reductase; Provisional	98.0
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	97.99
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	97.98
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	97.98
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.98
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	97.98
PLN00016	378	RNA-binding protein; Provisional	97.96
PRK07806	248	short chain dehydrogenase; Provisional	97.96
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	97.96
PRK12320	699	hypothetical protein; Provisional	97.96
PRK06194	287	hypothetical protein; Provisional	97.95
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.94
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	97.93
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.92
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	97.92
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	97.92
PRK12829	264	short chain dehydrogenase; Provisional	97.91
PRK05717	255	oxidoreductase; Validated	97.91
PRK07201	657	short chain dehydrogenase; Provisional	97.9
TIGR01746	367	Thioester-redct thioester reductase domain. It has	97.9
PRK07890	258	short chain dehydrogenase; Provisional	97.89
PRK12828	239	short chain dehydrogenase; Provisional	97.89
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.89
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.88
PRK07774	250	short chain dehydrogenase; Provisional	97.87
PRK12746	254	short chain dehydrogenase; Provisional	97.87
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	97.87
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	97.85
PRK07523	255	gluconate 5-dehydrogenase; Provisional	97.85
PRK12827	249	short chain dehydrogenase; Provisional	97.84
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	97.84
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	97.84
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	97.84
PRK09186	256	flagellin modification protein A; Provisional	97.83
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.83
PRK06914	280	short chain dehydrogenase; Provisional	97.83
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	97.83
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	97.82
PRK06482	276	short chain dehydrogenase; Provisional	97.82
PRK06057	255	short chain dehydrogenase; Provisional	97.81
PRK06180	277	short chain dehydrogenase; Provisional	97.8
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.79
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	97.79
PRK05875	276	short chain dehydrogenase; Provisional	97.79
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	97.79
PRK06179	270	short chain dehydrogenase; Provisional	97.78
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	97.77
PRK08263	275	short chain dehydrogenase; Provisional	97.77
PRK06128	300	oxidoreductase; Provisional	97.76
PRK07814	263	short chain dehydrogenase; Provisional	97.76
PRK08213	259	gluconate 5-dehydrogenase; Provisional	97.75
PRK06138	252	short chain dehydrogenase; Provisional	97.75
PRK07067	257	sorbitol dehydrogenase; Provisional	97.75
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	97.74
PRK08264	238	short chain dehydrogenase; Validated	97.74
PRK06197	306	short chain dehydrogenase; Provisional	97.74
PRK07326	237	short chain dehydrogenase; Provisional	97.74
PRK12937	245	short chain dehydrogenase; Provisional	97.73
PRK12747	252	short chain dehydrogenase; Provisional	97.72
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	97.72
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	97.72
PRK09291	257	short chain dehydrogenase; Provisional	97.72
PRK06500	249	short chain dehydrogenase; Provisional	97.72
PRK06523	260	short chain dehydrogenase; Provisional	97.72
PRK08226	263	short chain dehydrogenase; Provisional	97.71
PRK08703	239	short chain dehydrogenase; Provisional	97.71
PRK07577	234	short chain dehydrogenase; Provisional	97.71
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	97.7
PRK09072	263	short chain dehydrogenase; Provisional	97.7
PRK06841	255	short chain dehydrogenase; Provisional	97.7
PRK12742	237	oxidoreductase; Provisional	97.7
PRK06949	258	short chain dehydrogenase; Provisional	97.7
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	97.7
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.69
PRK08628	258	short chain dehydrogenase; Provisional	97.69
PRK06196	315	oxidoreductase; Provisional	97.69
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.69
PLN03209	576	translocon at the inner envelope of chloroplast su	97.69
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.69
PRK07102	243	short chain dehydrogenase; Provisional	97.68
PLN02253	280	xanthoxin dehydrogenase	97.68
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	97.68
PRK07035	252	short chain dehydrogenase; Provisional	97.67
PRK08278	273	short chain dehydrogenase; Provisional	97.67
PRK10538	248	malonic semialdehyde reductase; Provisional	97.67
PRK09134	258	short chain dehydrogenase; Provisional	97.67
PRK06182	273	short chain dehydrogenase; Validated	97.67
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	97.66
PLN02260	668	probable rhamnose biosynthetic enzyme	97.66
PRK07023	243	short chain dehydrogenase; Provisional	97.65
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.64
PRK12939	250	short chain dehydrogenase; Provisional	97.64
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	97.63
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	97.63
PRK12935	247	acetoacetyl-CoA reductase; Provisional	97.63
PRK08017	256	oxidoreductase; Provisional	97.63
PRK12938	246	acetyacetyl-CoA reductase; Provisional	97.62
PRK12367	245	short chain dehydrogenase; Provisional	97.62
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	97.62
PRK07063	260	short chain dehydrogenase; Provisional	97.61
PRK07453	322	protochlorophyllide oxidoreductase; Validated	97.61
PRK06924	251	short chain dehydrogenase; Provisional	97.61
PRK06101	240	short chain dehydrogenase; Provisional	97.61
PRK07060	245	short chain dehydrogenase; Provisional	97.61
PRK05876	275	short chain dehydrogenase; Provisional	97.61
PRK08267	260	short chain dehydrogenase; Provisional	97.6
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	97.6
PRK08643	256	acetoin reductase; Validated	97.6
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.6
PRK12744	257	short chain dehydrogenase; Provisional	97.6
PRK08219	227	short chain dehydrogenase; Provisional	97.6
PRK07856	252	short chain dehydrogenase; Provisional	97.6
PRK06172	253	short chain dehydrogenase; Provisional	97.59
PRK05867	253	short chain dehydrogenase; Provisional	97.59
PRK07775	274	short chain dehydrogenase; Provisional	97.59
PRK07825	273	short chain dehydrogenase; Provisional	97.59
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	97.59
PRK06398	258	aldose dehydrogenase; Validated	97.59
PRK06114	254	short chain dehydrogenase; Provisional	97.58
PRK12743	256	oxidoreductase; Provisional	97.58
PRK06701	290	short chain dehydrogenase; Provisional	97.58
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.57
PRK05866	293	short chain dehydrogenase; Provisional	97.56
PRK07024	257	short chain dehydrogenase; Provisional	97.56
PRK08251	248	short chain dehydrogenase; Provisional	97.56
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	97.55
PRK08589	272	short chain dehydrogenase; Validated	97.55
PRK07074	257	short chain dehydrogenase; Provisional	97.55
PRK06181	263	short chain dehydrogenase; Provisional	97.55
PRK08277	278	D-mannonate oxidoreductase; Provisional	97.54
PRK09620	229	hypothetical protein; Provisional	97.53
PRK05993	277	short chain dehydrogenase; Provisional	97.53
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	97.53
PRK08085	254	gluconate 5-dehydrogenase; Provisional	97.53
PRK06124	256	gluconate 5-dehydrogenase; Provisional	97.53
PRK05865	854	hypothetical protein; Provisional	97.53
PRK06123	248	short chain dehydrogenase; Provisional	97.52
PRK05693	274	short chain dehydrogenase; Provisional	97.52
PRK08265	261	short chain dehydrogenase; Provisional	97.52
PRK07985	294	oxidoreductase; Provisional	97.51
PRK07062	265	short chain dehydrogenase; Provisional	97.51
PRK07576	264	short chain dehydrogenase; Provisional	97.51
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	97.5
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	97.5
PRK08177	225	short chain dehydrogenase; Provisional	97.5
PRK07478	254	short chain dehydrogenase; Provisional	97.49
KOG1430|consensus	361		97.49
PRK07454	241	short chain dehydrogenase; Provisional	97.49
PRK06947	248	glucose-1-dehydrogenase; Provisional	97.47
PRK06953	222	short chain dehydrogenase; Provisional	97.47
PRK05854	313	short chain dehydrogenase; Provisional	97.45
PRK08936	261	glucose-1-dehydrogenase; Provisional	97.45
PRK05650	270	short chain dehydrogenase; Provisional	97.44
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.44
PRK06198	260	short chain dehydrogenase; Provisional	97.43
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.43
PRK09242	257	tropinone reductase; Provisional	97.43
PRK06483	236	dihydromonapterin reductase; Provisional	97.42
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.4
PRK07097	265	gluconate 5-dehydrogenase; Provisional	97.39
PRK08339	263	short chain dehydrogenase; Provisional	97.38
COG3320	382	Putative dehydrogenase domain of multifunctional n	97.37
PRK12824	245	acetoacetyl-CoA reductase; Provisional	97.34
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	97.33
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	97.33
PRK07069	251	short chain dehydrogenase; Validated	97.32
TIGR02415	254	23BDH acetoin reductases. One member of this famil	97.32
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	97.31
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	97.3
PRK07109	334	short chain dehydrogenase; Provisional	97.29
PRK07904	253	short chain dehydrogenase; Provisional	97.29
PRK07677	252	short chain dehydrogenase; Provisional	97.28
PRK07831	262	short chain dehydrogenase; Provisional	97.28
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	97.28
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	97.27
PRK09009	235	C factor cell-cell signaling protein; Provisional	97.26
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.24
PRK05884	223	short chain dehydrogenase; Provisional	97.22
PRK05872	296	short chain dehydrogenase; Provisional	97.22
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	97.2
PRK07832	272	short chain dehydrogenase; Provisional	97.19
PRK08309	177	short chain dehydrogenase; Provisional	97.16
PLN02780	320	ketoreductase/ oxidoreductase	97.14
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	97.1
PRK08340	259	glucose-1-dehydrogenase; Provisional	97.1
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	97.09
PRK06139	330	short chain dehydrogenase; Provisional	97.08
PRK06125	259	short chain dehydrogenase; Provisional	97.07
PRK07201	657	short chain dehydrogenase; Provisional	97.06
PRK05855	582	short chain dehydrogenase; Validated	97.04
PRK14982	340	acyl-ACP reductase; Provisional	97.04
PRK06720	169	hypothetical protein; Provisional	97.02
PRK07791	286	short chain dehydrogenase; Provisional	96.98
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	96.98
PRK07041	230	short chain dehydrogenase; Provisional	96.97
COG0300	265	DltE Short-chain dehydrogenases of various substra	96.89
PRK08303	305	short chain dehydrogenase; Provisional	96.87
PRK08324	681	short chain dehydrogenase; Validated	96.86
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.86
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.74
PRK06484	520	short chain dehydrogenase; Validated	96.73
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	96.62
PRK07578	199	short chain dehydrogenase; Provisional	96.62
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	96.61
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	96.59
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	96.56
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	96.53
PRK06484	520	short chain dehydrogenase; Validated	96.53
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	96.51
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	96.44
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	96.4
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	96.33
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	96.32
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	96.28
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	96.25
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	96.24
COG2910	211	Putative NADH-flavin reductase [General function p	96.24
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	96.23
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	96.22
COG1028	251	FabG Dehydrogenases with different specificities (	96.21
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.19
PRK08862	227	short chain dehydrogenase; Provisional	96.14
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	96.11
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	96.07
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	96.05
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	95.94
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.93
KOG0747|consensus	331		95.91
KOG1203|consensus	411		95.89
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	95.84
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	95.77
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	95.7
PRK06940	275	short chain dehydrogenase; Provisional	95.7
KOG1431|consensus	315		95.67
PLN02383	344	aspartate semialdehyde dehydrogenase	95.62
KOG1205|consensus	282		95.58
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	95.49
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	95.47
PRK05599	246	hypothetical protein; Provisional	95.31
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	95.22
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	95.08
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	95.08
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	94.96
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	94.95
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	94.9
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	94.74
PLN00015	308	protochlorophyllide reductase	94.69
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	94.58
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	94.55
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	94.43
KOG0725|consensus	270		94.27
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	94.19
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	93.88
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	93.87
KOG2865|consensus	391		93.71
KOG1372|consensus	376		93.67
KOG4039|consensus	238		93.49
KOG1201|consensus	300		93.37
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	93.33
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.17
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	93.1
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	92.94
KOG1208|consensus	314		92.73
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	92.64
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	92.57
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	92.45
PRK06849	389	hypothetical protein; Provisional	92.28
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.12
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	91.87
PRK09496	453	trkA potassium transporter peripheral membrane com	91.73
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	91.55
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	91.5
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	91.45
KOG1200|consensus	256		91.38
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	91.38
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	91.37
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	91.28
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	91.26
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	91.25
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	91.14
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.09
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.93
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	90.86
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	90.84
PRK08655	437	prephenate dehydrogenase; Provisional	90.81
KOG4169|consensus	261		90.63
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	90.6
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	90.27
PLN02696	454	1-deoxy-D-xylulose-5-phosphate reductoisomerase	90.0
PRK06901	322	aspartate-semialdehyde dehydrogenase; Provisional	89.97
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	89.81
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.55
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	89.5
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	89.22
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	89.17
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.11
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	89.08
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	89.05
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	88.87
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	88.71
PRK06444	197	prephenate dehydrogenase; Provisional	88.4
KOG1207|consensus	245		88.4
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	88.17
PRK05086	312	malate dehydrogenase; Provisional	88.11
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	87.95
KOG1014|consensus	312		87.73
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	87.66
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	87.61
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	87.36
PLN00106	323	malate dehydrogenase	87.23
KOG4022|consensus	236		87.15
PRK00048	257	dihydrodipicolinate reductase; Provisional	86.8
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	86.73
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	86.64
PRK12548	289	shikimate 5-dehydrogenase; Provisional	86.46
KOG1611|consensus	249		86.46
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	86.4
KOG1209|consensus	289		86.35
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	86.33
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	86.22
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	86.08
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	86.04
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	86.02
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	85.88
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	85.74
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	85.39
PTZ00325	321	malate dehydrogenase; Provisional	85.37
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	85.35
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	85.34
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	85.15
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	85.14
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	85.02
PRK06719	157	precorrin-2 dehydrogenase; Validated	84.94
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	84.92
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	84.86
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	84.67
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	84.55
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	84.51
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	84.39
PRK09496	453	trkA potassium transporter peripheral membrane com	84.35
COG0743	385	Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomeras	84.27
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	84.18
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	84.17
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	84.15
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	84.14
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	83.79
PRK12409	410	D-amino acid dehydrogenase small subunit; Provisio	83.78
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	83.75
PRK05442	326	malate dehydrogenase; Provisional	83.71
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	83.64
KOG1496|consensus	332		83.63
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	83.46
PRK00711	416	D-amino acid dehydrogenase small subunit; Validate	83.44
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	83.43
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	83.36
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	83.26
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	82.81
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	82.64
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	82.17
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	82.14
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	82.13
COG0190	283	FolD 5,10-methylene-tetrahydrofolate dehydrogenase	82.08
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	81.93
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	81.82
TIGR00243	389	Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomeras	81.82
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	81.81
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	81.72
COG0665	387	DadA Glycine/D-amino acid oxidases (deaminating) [	81.63
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	81.63
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	81.53
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	81.48
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	81.4
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	81.4
cd01076	227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	81.36
PRK07417	279	arogenate dehydrogenase; Reviewed	81.2
COG3268	382	Uncharacterized conserved protein [Function unknow	80.96
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	80.93
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	80.8
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	80.78
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	80.17
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	80.01

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.75  E-value=1.2e-08  Score=80.85  Aligned_cols=56  Identities=27%  Similarity=0.399  Sum_probs=49.0

Q ss_pred             CcccccccccCCCCCC---ChhhhhhccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          28 DKEDDAEDIIWDDDTP---SPIQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        28 ~~e~~~~~~l~~~~~~---~~~~~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+|++++|+|+|++.+   ..+..++++|+|+||||+|.|||.+++++++.+++...++
T Consensus       223 lreI~ieDLLgR~pV~~d~~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~  281 (588)
T COG1086         223 LREIEIEDLLGRPPVALDTELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILF  281 (588)
T ss_pred             cccCCHHHHhCCCCCCCCHHHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEe
Confidence            7899999999999776   4566778999999999999999999999999888766554

>KOG1502|consensus

Probab=98.65  E-value=2.8e-08  Score=74.37  Aligned_cols=33  Identities=33%  Similarity=0.490  Sum_probs=30.0

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .++.|+||||+||||+|++++|+++||.|+..+
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtV   37 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTV   37 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEE
Confidence            457899999999999999999999999998753

>PLN02996 fatty acyl-CoA reductase

Probab=98.63  E-value=2.9e-08  Score=76.90  Aligned_cols=40  Identities=40%  Similarity=0.754  Sum_probs=36.3

Q ss_pred             hhhhhhccceEEEeccCcchHHHHHHHHHHcCCceEEEEC
Q psy8179          45 PIQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLRF   84 (84)
Q Consensus        45 ~~~~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~~   84 (84)
                      .+.+++++++|+|||||||+|++++++|++.+++|.+||+
T Consensus         4 ~i~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~   43 (491)
T PLN02996          4 SCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYL   43 (491)
T ss_pred             cHHHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEE
Confidence            5677899999999999999999999999998899988874

>PLN02503 fatty acyl-CoA reductase 2

Probab=98.50  E-value=9.2e-08  Score=76.32  Aligned_cols=40  Identities=43%  Similarity=0.747  Sum_probs=35.9

Q ss_pred             hhhhhhccceEEEeccCcchHHHHHHHHHHcCCceEEEEC
Q psy8179          45 PIQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLRF   84 (84)
Q Consensus        45 ~~~~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~~   84 (84)
                      .+.+++++++|+|||||||+|++++++|++.+++|.+||+
T Consensus       112 ~I~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~  151 (605)
T PLN02503        112 GIAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYL  151 (605)
T ss_pred             chhhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEE
Confidence            3567789999999999999999999999998899888874

>PLN02572 UDP-sulfoquinovose synthase

Probab=98.50  E-value=1.5e-07  Score=72.00  Aligned_cols=39  Identities=15%  Similarity=0.181  Sum_probs=33.1

Q ss_pred             ChhhhhhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          44 SPIQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        44 ~~~~~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +......++++|+||||+||||++++++|+++|++|..+
T Consensus        39 ~~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~   77 (442)
T PLN02572         39 PGSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIV   77 (442)
T ss_pred             CCCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEE
Confidence            344455677899999999999999999999999998764

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=98.48  E-value=1.6e-07  Score=68.88  Aligned_cols=33  Identities=36%  Similarity=0.555  Sum_probs=29.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +..++|+|||||||+|++++++|+++|++|..+
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~   45 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGL   45 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEE
Confidence            455889999999999999999999999988654

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=98.48  E-value=1.7e-07  Score=66.98  Aligned_cols=32  Identities=31%  Similarity=0.480  Sum_probs=29.1

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++|+|||||||||++++++|+++|++|+.+
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~   34 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKAT   34 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEE
Confidence            45789999999999999999999999998754

>PLN02206 UDP-glucuronate decarboxylase

Probab=98.41  E-value=2.8e-07  Score=70.66  Aligned_cols=32  Identities=34%  Similarity=0.626  Sum_probs=29.4

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|+|+|||||||||+++++.|+++|++|..+
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~l  149 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVV  149 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEE
Confidence            56899999999999999999999999998764

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=98.40  E-value=3.6e-07  Score=66.72  Aligned_cols=33  Identities=33%  Similarity=0.524  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++|+||||+||||+++++.|+++|++|..+
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~   34 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGY   34 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999998654

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.39  E-value=3.7e-07  Score=64.39  Aligned_cols=29  Identities=41%  Similarity=0.744  Sum_probs=27.1

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +|+|||||||||++++++|+++||+|..+
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~   30 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGL   30 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEE
Confidence            49999999999999999999999999875

>CHL00194 ycf39 Ycf39; Provisional

Probab=98.38  E-value=3.9e-07  Score=66.00  Aligned_cols=30  Identities=33%  Similarity=0.448  Sum_probs=27.8

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|+|||||||+|++++++|+++|++|+.+
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l   30 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCL   30 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEE
Confidence            479999999999999999999999998765

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=98.37  E-value=4.3e-07  Score=69.53  Aligned_cols=31  Identities=32%  Similarity=0.633  Sum_probs=28.5

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++|+|||||||||++++++|+++|++|..+
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~l  150 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVI  150 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEE
Confidence            4789999999999999999999999998764

>PLN00198 anthocyanidin reductase; Provisional

Probab=98.37  E-value=4.7e-07  Score=65.65  Aligned_cols=33  Identities=33%  Similarity=0.441  Sum_probs=29.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++|+||||+||||++++++|+++|++|..+
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~   39 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTT   39 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEE
Confidence            346789999999999999999999999998654

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=98.36  E-value=4.7e-07  Score=65.90  Aligned_cols=30  Identities=40%  Similarity=0.416  Sum_probs=27.5

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|+||||+||||++++++|++.|++|..+
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~   30 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGL   30 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEE
Confidence            479999999999999999999999998754

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=98.35  E-value=6e-07  Score=64.59  Aligned_cols=32  Identities=28%  Similarity=0.392  Sum_probs=29.0

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++|+||||+||||++++++|+++|++|..+
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~   35 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKAT   35 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            46789999999999999999999999998754

>PLN02427 UDP-apiose/xylose synthase

Probab=98.34  E-value=5.3e-07  Score=66.75  Aligned_cols=31  Identities=42%  Similarity=0.624  Sum_probs=27.2

Q ss_pred             cceEEEeccCcchHHHHHHHHHHc-CCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRC-CPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~-g~~V~~I   82 (84)
                      .|+|+|||||||||++++++|+++ +++|..+
T Consensus        14 ~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l   45 (386)
T PLN02427         14 PLTICMIGAGGFIGSHLCEKLMTETPHKVLAL   45 (386)
T ss_pred             CcEEEEECCcchHHHHHHHHHHhcCCCEEEEE
Confidence            367999999999999999999998 5887654

>PLN02583 cinnamoyl-CoA reductase

Probab=98.30  E-value=9.2e-07  Score=63.60  Aligned_cols=31  Identities=26%  Similarity=0.438  Sum_probs=28.5

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++|+||||+||||++++++|+++||+|+.+
T Consensus         6 ~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~   36 (297)
T PLN02583          6 SKSVCVMDASGYVGFWLVKRLLSRGYTVHAA   36 (297)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEE
Confidence            4689999999999999999999999999765

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=98.30  E-value=8.7e-07  Score=64.30  Aligned_cols=33  Identities=33%  Similarity=0.325  Sum_probs=29.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++++|+||||+||||++++++|+++|++|..+
T Consensus         4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~   36 (340)
T PLN02653          4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGI   36 (340)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEE
Confidence            456789999999999999999999999998754

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=98.29  E-value=8.5e-07  Score=65.99  Aligned_cols=32  Identities=25%  Similarity=0.393  Sum_probs=29.4

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+|+|+|||||||||+++++.|.++|++|..+
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v   51 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIAS   51 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEE
Confidence            45889999999999999999999999998765

>PLN02650 dihydroflavonol-4-reductase

Probab=98.28  E-value=8.9e-07  Score=64.62  Aligned_cols=31  Identities=42%  Similarity=0.606  Sum_probs=28.1

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++|+||||+||||++++++|+++|++|..+
T Consensus         5 ~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~   35 (351)
T PLN02650          5 KETVCVTGASGFIGSWLVMRLLERGYTVRAT   35 (351)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHHCCCEEEEE
Confidence            4689999999999999999999999998754

>PLN02778 3,5-epimerase/4-reductase

Probab=98.28  E-value=7.6e-07  Score=64.50  Aligned_cols=29  Identities=24%  Similarity=0.302  Sum_probs=26.8

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQML   80 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~   80 (84)
                      .|+|+||||+||||++++++|+++|++|.
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~   37 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFH   37 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEE
Confidence            36899999999999999999999999885

>KOG1221|consensus

Probab=98.27  E-value=8.4e-07  Score=69.19  Aligned_cols=39  Identities=54%  Similarity=1.008  Sum_probs=36.6

Q ss_pred             hhhhhccceEEEeccCcchHHHHHHHHHHcCCceEEEEC
Q psy8179          46 IQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLRF   84 (84)
Q Consensus        46 ~~~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~~   84 (84)
                      ..+++.+++|+|||||||+|..++++|++..++|..||+
T Consensus         6 i~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYl   44 (467)
T KOG1221|consen    6 IVQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYL   44 (467)
T ss_pred             HHHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEE
Confidence            667899999999999999999999999999899999985

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=98.26  E-value=1.1e-06  Score=70.02  Aligned_cols=37  Identities=32%  Similarity=0.494  Sum_probs=31.8

Q ss_pred             hhhhhccceEEEeccCcchHHHHHHHHHHc-CCceEEE
Q psy8179          46 IQEFYKDQTVFITGATGFLGSLLVEKLLRC-CPQMLSL   82 (84)
Q Consensus        46 ~~~~~~~~~vlitGatGfiG~~l~~~ll~~-g~~V~~I   82 (84)
                      ...++++++|+|||||||||++++++|+++ ||+|+.+
T Consensus       309 ~~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l  346 (660)
T PRK08125        309 ACSAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGL  346 (660)
T ss_pred             hhhhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEE
Confidence            345567899999999999999999999985 6898765

>PLN02214 cinnamoyl-CoA reductase

Probab=98.26  E-value=1.2e-06  Score=64.29  Aligned_cols=32  Identities=31%  Similarity=0.431  Sum_probs=29.0

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++|+||||+||||++++++|+++|++|+.+
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~   40 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGT   40 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEE
Confidence            45789999999999999999999999998764

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=98.25  E-value=1.1e-06  Score=62.73  Aligned_cols=28  Identities=29%  Similarity=0.470  Sum_probs=25.4

Q ss_pred             EEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          55 VFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        55 vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+||||+||||++++++|+++|+++..+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~   29 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILV   29 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEE
Confidence            8999999999999999999999876654

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=98.24  E-value=1.4e-06  Score=63.74  Aligned_cols=31  Identities=39%  Similarity=0.512  Sum_probs=28.3

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++|+||||+||||++++++|+++|++|..+
T Consensus        10 ~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~   40 (353)
T PLN02896         10 TGTYCVTGATGYIGSWLVKLLLQRGYTVHAT   40 (353)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            4689999999999999999999999998764

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=98.24  E-value=1.2e-06  Score=65.52  Aligned_cols=30  Identities=33%  Similarity=0.649  Sum_probs=27.8

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|+||||+||||||.+.+|++.|++|..+
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~   30 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVL   30 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEE
Confidence            479999999999999999999999998765

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=98.23  E-value=1.3e-06  Score=63.64  Aligned_cols=30  Identities=27%  Similarity=0.553  Sum_probs=26.5

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc-CCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC-CPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~-g~~V~~I   82 (84)
                      |+|+|||||||+|++++++|++. |++|..+
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~   32 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGM   32 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEE
Confidence            57999999999999999999986 6888764

>PLN02686 cinnamoyl-CoA reductase

Probab=98.23  E-value=1.5e-06  Score=64.63  Aligned_cols=35  Identities=29%  Similarity=0.372  Sum_probs=30.9

Q ss_pred             hhhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          48 EFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        48 ~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..+++++|+||||+||||++++++|+++|++|..+
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~   83 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIA   83 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEE
Confidence            34567899999999999999999999999998754

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=98.21  E-value=1.8e-06  Score=62.04  Aligned_cols=31  Identities=29%  Similarity=0.419  Sum_probs=28.2

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++||||+||||++++++|+++|++|..+
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~   35 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFRGYTINAT   35 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEE
Confidence            5789999999999999999999999998654

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=98.19  E-value=1.6e-06  Score=62.46  Aligned_cols=28  Identities=21%  Similarity=0.341  Sum_probs=24.9

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      |+|+||||+||||++++++|+++| +|..
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~   28 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIA   28 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEE
Confidence            479999999999999999999988 6654

>KOG1429|consensus

Probab=98.19  E-value=1.7e-06  Score=64.70  Aligned_cols=32  Identities=38%  Similarity=0.724  Sum_probs=29.0

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++|+||||.|||||||+++|+..|+.|..+
T Consensus        26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~   57 (350)
T KOG1429|consen   26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIAL   57 (350)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHhcCCeEEEE
Confidence            34899999999999999999999999998764

>PLN02240 UDP-glucose 4-epimerase

Probab=98.19  E-value=2.2e-06  Score=62.09  Aligned_cols=33  Identities=27%  Similarity=0.518  Sum_probs=29.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++|+|||||||+|++++++|+++|++|..+
T Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~   35 (352)
T PLN02240          3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVI   35 (352)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            446789999999999999999999999988764

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=98.18  E-value=2.4e-06  Score=58.00  Aligned_cols=28  Identities=50%  Similarity=0.837  Sum_probs=25.8

Q ss_pred             EEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          55 VFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        55 vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|||||||+|++++++|+++|+.|..+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~   28 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVL   28 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccc
Confidence            7899999999999999999999997654

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=98.14  E-value=3.1e-06  Score=61.57  Aligned_cols=29  Identities=31%  Similarity=0.626  Sum_probs=26.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      ++|+|||||||||+++++.|+++|+++..
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~   30 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVV   30 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEE
Confidence            57999999999999999999999988653

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=98.13  E-value=3.1e-06  Score=60.98  Aligned_cols=30  Identities=30%  Similarity=0.547  Sum_probs=27.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+++||||+||||++++++|+++|++|..+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~   30 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVIL   30 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEE
Confidence            479999999999999999999999998754

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.12  E-value=3.3e-06  Score=58.52  Aligned_cols=30  Identities=33%  Similarity=0.583  Sum_probs=27.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|+|||||||+|++++++|+++|++|+.+
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~   30 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAA   30 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEE
Confidence            469999999999999999999999998765

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.11  E-value=2.8e-06  Score=59.46  Aligned_cols=28  Identities=36%  Similarity=0.649  Sum_probs=26.0

Q ss_pred             EEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          55 VFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        55 vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|||||||||+++++.|+++|++|..+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~   28 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTIL   28 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEE
Confidence            6899999999999999999999998765

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.10  E-value=3.3e-06  Score=66.91  Aligned_cols=33  Identities=30%  Similarity=0.608  Sum_probs=28.0

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHc--CCceEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRC--CPQMLS   81 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~--g~~V~~   81 (84)
                      +++.++|+|||||||||++++++|+++  +++|..
T Consensus         3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~   37 (668)
T PLN02260          3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVV   37 (668)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEE
Confidence            467789999999999999999999998  455543

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=98.03  E-value=5.2e-06  Score=58.41  Aligned_cols=29  Identities=38%  Similarity=0.520  Sum_probs=26.5

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +|+|||||||+|++++++|+++|++|..+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~   29 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVAL   29 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEe
Confidence            48999999999999999999999998754

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>KOG1371|consensus

Probab=98.03  E-value=5.5e-06  Score=62.40  Aligned_cols=31  Identities=29%  Similarity=0.497  Sum_probs=28.9

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++|+||||+||||+|.+-+|+++||+|..|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~v   32 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIV   32 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEE
Confidence            4689999999999999999999999999876

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=98.02  E-value=7.1e-06  Score=59.60  Aligned_cols=27  Identities=26%  Similarity=0.625  Sum_probs=24.5

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCce
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQM   79 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V   79 (84)
                      ++|+|||||||||++++++|+++|+++
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~   27 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDS   27 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCe
Confidence            469999999999999999999998764

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=98.01  E-value=7.1e-06  Score=59.82  Aligned_cols=32  Identities=25%  Similarity=0.647  Sum_probs=27.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcC--CceEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCC--PQMLS   81 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g--~~V~~   81 (84)
                      +.+++++||||+||||++++++|+++|  ++|..
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~   35 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIII   35 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEE
Confidence            456889999999999999999999986  45543

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK09135 pteridine reductase; Provisional

Probab=98.00  E-value=9.3e-06  Score=55.49  Aligned_cols=32  Identities=16%  Similarity=0.223  Sum_probs=28.6

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++||||+||+|++++++|+++|++|..+
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~   36 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIH   36 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            45789999999999999999999999988654

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=97.99  E-value=7.4e-06  Score=58.03  Aligned_cols=29  Identities=28%  Similarity=0.346  Sum_probs=26.6

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +|+||||||++|++++++|+++|++|+.+
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~   29 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVA   29 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEE
Confidence            48999999999999999999999998764

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=97.98  E-value=8.5e-06  Score=61.32  Aligned_cols=33  Identities=36%  Similarity=0.667  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..+++|+|||||||||+++++.|+++|++|+.+
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l   90 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAV   90 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            456889999999999999999999999998754

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.98  E-value=1e-05  Score=55.71  Aligned_cols=33  Identities=18%  Similarity=0.246  Sum_probs=29.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|++|++++++|+++|++|..+
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~   34 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIA   34 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEE
Confidence            346789999999999999999999999988654

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.98  E-value=1.1e-05  Score=54.84  Aligned_cols=33  Identities=18%  Similarity=0.299  Sum_probs=29.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++|||++|++|++++++|+++|++|..+
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~   35 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVIN   35 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            356789999999999999999999999988544

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=97.98  E-value=8.9e-06  Score=57.78  Aligned_cols=30  Identities=43%  Similarity=0.619  Sum_probs=27.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++||||+||+|+++++.|+++|++|..+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~   30 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVL   30 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEE
Confidence            469999999999999999999999988765

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN00016 RNA-binding protein; Provisional

Probab=97.96  E-value=9.7e-06  Score=60.17  Aligned_cols=33  Identities=21%  Similarity=0.483  Sum_probs=29.4

Q ss_pred             ccceEEEe----ccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          51 KDQTVFIT----GATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        51 ~~~~vlit----GatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ..++|+||    |||||+|+++++.|+++||+|+.+.
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~   87 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFT   87 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEe
Confidence            34689999    9999999999999999999998763

>PRK07806 short chain dehydrogenase; Provisional

Probab=97.96  E-value=1.3e-05  Score=55.16  Aligned_cols=33  Identities=15%  Similarity=0.202  Sum_probs=29.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+||||++++++|+++|++|..+
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~   36 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVN   36 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEE
Confidence            456789999999999999999999999988654

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=97.96  E-value=1.2e-05  Score=55.00  Aligned_cols=33  Identities=15%  Similarity=0.303  Sum_probs=29.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|++|++++++|+++|++|..+
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~   36 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVV   36 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEE
Confidence            456789999999999999999999999987654

>PRK12320 hypothetical protein; Provisional

Probab=97.96  E-value=8.8e-06  Score=66.12  Aligned_cols=30  Identities=20%  Similarity=0.391  Sum_probs=27.5

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|+||||+||||++++++|+++|++|+.+
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~l   30 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGI   30 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEE
Confidence            479999999999999999999999998765

>PRK06194 hypothetical protein; Provisional

Probab=97.95  E-value=1.1e-05  Score=56.78  Aligned_cols=33  Identities=15%  Similarity=0.145  Sum_probs=29.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~   36 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLA   36 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEE
Confidence            346789999999999999999999999987644

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.94  E-value=1.2e-05  Score=53.27  Aligned_cols=28  Identities=39%  Similarity=0.707  Sum_probs=26.2

Q ss_pred             EEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          55 VFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        55 vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|+||||++|+.++++|+++|++|+.+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~   28 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTAL   28 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            7899999999999999999999998765

...

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=97.93  E-value=1.4e-05  Score=55.89  Aligned_cols=33  Identities=39%  Similarity=0.449  Sum_probs=29.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ...++|+||||+|++|+.++++|+++|++|+.+
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~   47 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAG   47 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEE
Confidence            345789999999999999999999999998653

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.92  E-value=1.6e-05  Score=53.99  Aligned_cols=31  Identities=23%  Similarity=0.355  Sum_probs=27.8

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      ..++++||||+|++|++++++|+++|++|..
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~   35 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVV   35 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEE
Confidence            4578999999999999999999999998744

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=97.92  E-value=6.7e-06  Score=59.55  Aligned_cols=26  Identities=38%  Similarity=0.641  Sum_probs=23.0

Q ss_pred             EEeccCcchHHHHHHHHHHcC--CceEE
Q psy8179          56 FITGATGFLGSLLVEKLLRCC--PQMLS   81 (84)
Q Consensus        56 litGatGfiG~~l~~~ll~~g--~~V~~   81 (84)
                      +||||+||+|++++++|+++|  ++|+.
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~   28 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRV   28 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEE
Confidence            599999999999999999999  56654

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.92  E-value=1.6e-05  Score=54.89  Aligned_cols=33  Identities=21%  Similarity=0.274  Sum_probs=29.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|++|+++++.|+++|++|..+
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~   37 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIA   37 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEE
Confidence            456889999999999999999999999988654

>PRK12829 short chain dehydrogenase; Provisional

Probab=97.91  E-value=1.8e-05  Score=54.71  Aligned_cols=34  Identities=15%  Similarity=0.215  Sum_probs=30.3

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++++||||+|++|++++++|+++|++|..+
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~   41 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVC   41 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEE
Confidence            3567899999999999999999999999988654

>PRK05717 oxidoreductase; Validated

Probab=97.91  E-value=1.6e-05  Score=55.27  Aligned_cols=34  Identities=18%  Similarity=0.075  Sum_probs=30.1

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+++++||||+|+||++++++|+++|++|..+
T Consensus         7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~   40 (255)
T PRK05717          7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLA   40 (255)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEE
Confidence            3567899999999999999999999999987654

>PRK07201 short chain dehydrogenase; Provisional

Probab=97.90  E-value=1.2e-05  Score=62.89  Aligned_cols=30  Identities=43%  Similarity=0.681  Sum_probs=26.2

Q ss_pred             ceEEEeccCcchHHHHHHHHH--HcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLL--RCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll--~~g~~V~~I   82 (84)
                      |+|+|||||||||++++++|+  ..+++|..+
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l   32 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVL   32 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEE
Confidence            479999999999999999999  477887655

>TIGR01746 Thioester-redct thioester reductase domain

Probab=97.90  E-value=1.2e-05  Score=57.44  Aligned_cols=29  Identities=55%  Similarity=0.934  Sum_probs=24.6

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCC--ceEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCP--QMLSL   82 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~--~V~~I   82 (84)
                      +|+|||||||+|++++++|+++|+  +|..+
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l   31 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICL   31 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEE
Confidence            489999999999999999999984  45543

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK07890 short chain dehydrogenase; Provisional

Probab=97.89  E-value=2e-05  Score=54.40  Aligned_cols=33  Identities=21%  Similarity=0.282  Sum_probs=29.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~   35 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLA   35 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEE
Confidence            456889999999999999999999999988654

>PRK12828 short chain dehydrogenase; Provisional

Probab=97.89  E-value=1.9e-05  Score=53.50  Aligned_cols=33  Identities=24%  Similarity=0.228  Sum_probs=29.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|++|++++++|+++|++|..+
T Consensus         5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~   37 (239)
T PRK12828          5 LQGKVVAITGGFGGLGRATAAWLAARGARVALI   37 (239)
T ss_pred             CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEE
Confidence            356899999999999999999999999987654

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.89  E-value=1.9e-05  Score=54.09  Aligned_cols=33  Identities=12%  Similarity=0.249  Sum_probs=29.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|++|++++++|+++|++|..+
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~   35 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVT   35 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            456789999999999999999999999987654

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.88  E-value=2e-05  Score=53.48  Aligned_cols=33  Identities=18%  Similarity=0.292  Sum_probs=28.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|++|++++++|.++|++|..+
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~   35 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIY   35 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            345789999999999999999999999987543

>PRK07774 short chain dehydrogenase; Provisional

Probab=97.87  E-value=2.1e-05  Score=54.10  Aligned_cols=33  Identities=27%  Similarity=0.460  Sum_probs=29.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|++|++++++|+++|++|..+
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~   36 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVA   36 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            356889999999999999999999999988654

>PRK12746 short chain dehydrogenase; Provisional

Probab=97.87  E-value=2e-05  Score=54.48  Aligned_cols=32  Identities=16%  Similarity=0.220  Sum_probs=28.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      +.+++++||||+|+||++++++|+++|++|..
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i   35 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAI   35 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEE
Confidence            34578999999999999999999999998754

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=97.87  E-value=2.1e-05  Score=53.95  Aligned_cols=32  Identities=22%  Similarity=0.374  Sum_probs=28.6

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++||||+|++|++++++|+++|++|..+
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~   33 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVF   33 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEe
Confidence            46789999999999999999999999987654

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=97.85  E-value=1.1e-05  Score=57.07  Aligned_cols=27  Identities=37%  Similarity=0.522  Sum_probs=24.1

Q ss_pred             EEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          56 FITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        56 litGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +|||||||||+++++.|++.|++|..+
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~   27 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVL   27 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEe
Confidence            589999999999999999999887543

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=97.85  E-value=2.6e-05  Score=54.14  Aligned_cols=33  Identities=18%  Similarity=0.296  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|++|+.++++|+++|++|..+
T Consensus         8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~   40 (255)
T PRK07523          8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILN   40 (255)
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEE
Confidence            457899999999999999999999999988654

>PRK12827 short chain dehydrogenase; Provisional

Probab=97.84  E-value=2.7e-05  Score=53.22  Aligned_cols=33  Identities=27%  Similarity=0.432  Sum_probs=29.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||+++++.|+++|++|..+
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~   36 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVL   36 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEE
Confidence            346789999999999999999999999988653

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=97.84  E-value=2.5e-05  Score=54.19  Aligned_cols=33  Identities=15%  Similarity=0.227  Sum_probs=29.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~   38 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLV   38 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            557899999999999999999999999987654

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=97.84  E-value=2.6e-05  Score=53.72  Aligned_cols=33  Identities=18%  Similarity=0.268  Sum_probs=29.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~   35 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGA   35 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999987654

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=97.84  E-value=1.5e-05  Score=59.06  Aligned_cols=28  Identities=36%  Similarity=0.585  Sum_probs=26.1

Q ss_pred             EEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          55 VFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        55 vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|||||||||++++..|.+.||+|..+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~il   28 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTIL   28 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEE
Confidence            5899999999999999999999999775

>PRK09186 flagellin modification protein A; Provisional

Probab=97.83  E-value=2.6e-05  Score=53.83  Aligned_cols=33  Identities=36%  Similarity=0.612  Sum_probs=29.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||+++++.|.++|++|..+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~   34 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAA   34 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            457899999999999999999999999987654

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.83  E-value=2.8e-05  Score=53.39  Aligned_cols=31  Identities=23%  Similarity=0.349  Sum_probs=28.0

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      .+++++||||+||||++++++|+++|++|..
T Consensus         5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~   35 (252)
T PRK06077          5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVV   35 (252)
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEE
Confidence            4578999999999999999999999998754

>PRK06914 short chain dehydrogenase; Provisional

Probab=97.83  E-value=2.6e-05  Score=54.77  Aligned_cols=32  Identities=19%  Similarity=0.235  Sum_probs=28.5

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++||||+|++|+++++.|+++|++|..+
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~   33 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIAT   33 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEE
Confidence            35679999999999999999999999988654

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=97.83  E-value=2.5e-05  Score=53.65  Aligned_cols=30  Identities=20%  Similarity=0.262  Sum_probs=27.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++||||+|++|++++++|+++|++|..+
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~   31 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVN   31 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEE
Confidence            579999999999999999999999987654

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=97.82  E-value=1.7e-05  Score=56.25  Aligned_cols=27  Identities=37%  Similarity=0.603  Sum_probs=23.9

Q ss_pred             EEEeccCcchHHHHHHHHHHcCC-ceEE
Q psy8179          55 VFITGATGFLGSLLVEKLLRCCP-QMLS   81 (84)
Q Consensus        55 vlitGatGfiG~~l~~~ll~~g~-~V~~   81 (84)
                      |+|||||||+|++++++|.++|+ +|..
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~   28 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILV   28 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEE
Confidence            68999999999999999999997 4543

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK06482 short chain dehydrogenase; Provisional

Probab=97.82  E-value=2.8e-05  Score=54.60  Aligned_cols=30  Identities=33%  Similarity=0.422  Sum_probs=27.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++||||+||||++++++|+++|++|..+
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~   32 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAAT   32 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEE
Confidence            679999999999999999999999987654

>PRK06057 short chain dehydrogenase; Provisional

Probab=97.81  E-value=3.1e-05  Score=53.84  Aligned_cols=33  Identities=15%  Similarity=0.129  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~   37 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVG   37 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEE
Confidence            567899999999999999999999999988654

>PRK06180 short chain dehydrogenase; Provisional

Probab=97.80  E-value=3e-05  Score=54.82  Aligned_cols=32  Identities=22%  Similarity=0.279  Sum_probs=28.5

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++||||+|+||++++++|+++|++|..+
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~   34 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGT   34 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEE
Confidence            35789999999999999999999999988654

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.79  E-value=3.5e-05  Score=53.00  Aligned_cols=32  Identities=25%  Similarity=0.381  Sum_probs=28.5

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++++||||+|+||++++++|+++|++|..+
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~   35 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVN   35 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEE
Confidence            45789999999999999999999999988643

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=97.79  E-value=2.5e-05  Score=55.04  Aligned_cols=28  Identities=29%  Similarity=0.623  Sum_probs=24.1

Q ss_pred             eEEEeccCcchHHHHHHHHHHcC--CceEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCC--PQMLS   81 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g--~~V~~   81 (84)
                      +|+|||||||+|++++++|++++  ++|..
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~   30 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIV   30 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEE
Confidence            48999999999999999999987  45543

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK05875 short chain dehydrogenase; Provisional

Probab=97.79  E-value=3.6e-05  Score=53.96  Aligned_cols=33  Identities=18%  Similarity=0.376  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++|||++|+||+++++.|+++|++|..+
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~   37 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIV   37 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEE
Confidence            456899999999999999999999999987654

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.79  E-value=3.7e-05  Score=52.90  Aligned_cols=32  Identities=13%  Similarity=0.177  Sum_probs=28.5

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++||||+|+||++++++|+++|++|..+
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~   34 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVN   34 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            45789999999999999999999999987643

>PRK06179 short chain dehydrogenase; Provisional

Probab=97.78  E-value=3.4e-05  Score=53.91  Aligned_cols=32  Identities=25%  Similarity=0.386  Sum_probs=28.3

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++.++||||+|+||++++++|.++|++|..+
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~   34 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGT   34 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE
Confidence            35689999999999999999999999987653

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=97.77  E-value=2.5e-05  Score=54.99  Aligned_cols=23  Identities=65%  Similarity=1.002  Sum_probs=19.4

Q ss_pred             EeccCcchHHHHHHHHHHcCCce
Q psy8179          57 ITGATGFLGSLLVEKLLRCCPQM   79 (84)
Q Consensus        57 itGatGfiG~~l~~~ll~~g~~V   79 (84)
                      |||||||+|++++.+|+++++.+
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~   23 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDV   23 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TT
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCc
Confidence            79999999999999999997755

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK08263 short chain dehydrogenase; Provisional

Probab=97.77  E-value=4.1e-05  Score=53.97  Aligned_cols=32  Identities=25%  Similarity=0.321  Sum_probs=28.4

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++||||+|++|++++++|+++|++|..+
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~   33 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVAT   33 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence            35789999999999999999999999987654

>PRK06128 oxidoreductase; Provisional

Probab=97.76  E-value=4.5e-05  Score=54.73  Aligned_cols=34  Identities=18%  Similarity=0.157  Sum_probs=30.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.+++++||||+|+||++++++|++.|++|..++
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~   86 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFAREGADIALNY   86 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEe
Confidence            4568999999999999999999999999987554

>PRK07814 short chain dehydrogenase; Provisional

Probab=97.76  E-value=4.5e-05  Score=53.44  Aligned_cols=33  Identities=24%  Similarity=0.296  Sum_probs=29.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~   40 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIA   40 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            457899999999999999999999999988654

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=97.75  E-value=4.5e-05  Score=53.01  Aligned_cols=33  Identities=21%  Similarity=0.272  Sum_probs=29.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~   42 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLS   42 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEE
Confidence            356899999999999999999999999987544

>PRK06138 short chain dehydrogenase; Provisional

Probab=97.75  E-value=4.3e-05  Score=52.50  Aligned_cols=33  Identities=15%  Similarity=0.208  Sum_probs=29.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|++|++++++|+++|++|..+
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~   35 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVA   35 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEe
Confidence            356889999999999999999999999887654

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=97.75  E-value=4.4e-05  Score=53.00  Aligned_cols=33  Identities=18%  Similarity=0.330  Sum_probs=29.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||+++++.|+++|++|..+
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~   36 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIA   36 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEE
Confidence            346789999999999999999999999987654

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=97.74  E-value=4.9e-05  Score=52.34  Aligned_cols=33  Identities=18%  Similarity=0.421  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|++|+.++++|+++|++|..+
T Consensus         6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~   38 (252)
T PRK08220          6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGF   38 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            456889999999999999999999999988665

>PRK08264 short chain dehydrogenase; Validated

Probab=97.74  E-value=4.8e-05  Score=52.07  Aligned_cols=33  Identities=30%  Similarity=0.439  Sum_probs=28.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCC-ceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCP-QMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~-~V~~I   82 (84)
                      +.+++++||||+|++|++++++|+++|+ +|..+
T Consensus         4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~   37 (238)
T PRK08264          4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAA   37 (238)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEE
Confidence            3467899999999999999999999998 76544

>PRK06197 short chain dehydrogenase; Provisional

Probab=97.74  E-value=4.3e-05  Score=54.80  Aligned_cols=33  Identities=18%  Similarity=0.126  Sum_probs=29.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus        14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~   46 (306)
T PRK06197         14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLA   46 (306)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999987654

>PRK07326 short chain dehydrogenase; Provisional

Probab=97.74  E-value=5e-05  Score=51.85  Aligned_cols=32  Identities=25%  Similarity=0.265  Sum_probs=28.4

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++||||+|++|++++++|+++|++|..+
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~   36 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAIT   36 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEe
Confidence            35789999999999999999999999987654

>PRK12937 short chain dehydrogenase; Provisional

Probab=97.73  E-value=4.8e-05  Score=52.07  Aligned_cols=33  Identities=15%  Similarity=0.199  Sum_probs=29.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++++++||||+|+||+++++.|.++|++|..+
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~   35 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVN   35 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEe
Confidence            356889999999999999999999999987644

>PRK12747 short chain dehydrogenase; Provisional

Probab=97.72  E-value=5.1e-05  Score=52.57  Aligned_cols=33  Identities=18%  Similarity=0.253  Sum_probs=29.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.++.++||||+|+||++++++|.+.|++|...
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~   34 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIH   34 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEE
Confidence            356899999999999999999999999987653

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=97.72  E-value=5.4e-05  Score=52.91  Aligned_cols=33  Identities=24%  Similarity=0.436  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~   35 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVL   35 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            356899999999999999999999999998654

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=97.72  E-value=3.8e-05  Score=54.22  Aligned_cols=29  Identities=31%  Similarity=0.660  Sum_probs=26.1

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +|+||||+||+|++++++|+++|++|..+
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~   29 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVL   29 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEE
Confidence            48999999999999999999999988643

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK09291 short chain dehydrogenase; Provisional

Probab=97.72  E-value=4.9e-05  Score=52.45  Aligned_cols=31  Identities=26%  Similarity=0.324  Sum_probs=27.6

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++||||+|+||++++++|++.|++|..+
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~   32 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAG   32 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            3579999999999999999999999988653

>PRK06500 short chain dehydrogenase; Provisional

Probab=97.72  E-value=5.2e-05  Score=51.99  Aligned_cols=33  Identities=21%  Similarity=0.241  Sum_probs=28.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|++|++++++|+++|++|..+
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~   36 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAIT   36 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEe
Confidence            346789999999999999999999999887543

>PRK06523 short chain dehydrogenase; Provisional

Probab=97.72  E-value=5.7e-05  Score=52.42  Aligned_cols=33  Identities=21%  Similarity=0.389  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|.||++++++|.++|++|..+
T Consensus         7 ~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~   39 (260)
T PRK06523          7 LAGKRALVTGGTKGIGAATVARLLEAGARVVTT   39 (260)
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999987654

>PRK08226 short chain dehydrogenase; Provisional

Probab=97.71  E-value=5.2e-05  Score=52.71  Aligned_cols=33  Identities=24%  Similarity=0.323  Sum_probs=29.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~   36 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILL   36 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEe
Confidence            456889999999999999999999999987654

>PRK08703 short chain dehydrogenase; Provisional

Probab=97.71  E-value=5.7e-05  Score=51.91  Aligned_cols=33  Identities=21%  Similarity=0.373  Sum_probs=29.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|++|++++++|+++|++|..+
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~   36 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILV   36 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEE
Confidence            456899999999999999999999999987644

>PRK07577 short chain dehydrogenase; Provisional

Probab=97.71  E-value=5.7e-05  Score=51.45  Aligned_cols=32  Identities=31%  Similarity=0.403  Sum_probs=28.5

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++||||+|++|++++++|+++|++|..+
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~   33 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGI   33 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEE
Confidence            35789999999999999999999999988654

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=97.70  E-value=5.9e-05  Score=52.09  Aligned_cols=34  Identities=24%  Similarity=0.332  Sum_probs=30.1

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ...+++++|||++|++|.+++++|++.|++|..+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~   42 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILL   42 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEE
Confidence            4567899999999999999999999999988654

>PRK09072 short chain dehydrogenase; Provisional

Probab=97.70  E-value=5.6e-05  Score=52.74  Aligned_cols=32  Identities=38%  Similarity=0.589  Sum_probs=28.9

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++++||||+|++|++++++|+++|++|..+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~   35 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLV   35 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            46789999999999999999999999988654

>PRK06841 short chain dehydrogenase; Provisional

Probab=97.70  E-value=6.2e-05  Score=51.98  Aligned_cols=33  Identities=15%  Similarity=0.227  Sum_probs=29.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus        13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~   45 (255)
T PRK06841         13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALL   45 (255)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999987644

>PRK12742 oxidoreductase; Provisional

Probab=97.70  E-value=5.7e-05  Score=51.54  Aligned_cols=33  Identities=12%  Similarity=0.302  Sum_probs=29.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|.++|++|..+
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~   36 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFT   36 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEe
Confidence            456889999999999999999999999987643

>PRK06949 short chain dehydrogenase; Provisional

Probab=97.70  E-value=6e-05  Score=52.06  Aligned_cols=33  Identities=18%  Similarity=0.330  Sum_probs=29.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|.++|++|..+
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~   39 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLA   39 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            556899999999999999999999999887654

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.70  E-value=5.3e-05  Score=52.27  Aligned_cols=30  Identities=13%  Similarity=0.098  Sum_probs=27.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.++||||+|+||++++++|+++|++|..+
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~   32 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAIN   32 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            579999999999999999999999987654

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.69  E-value=5.9e-05  Score=51.43  Aligned_cols=33  Identities=21%  Similarity=0.344  Sum_probs=29.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|++|++++++|++.|++|..+
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~   35 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIA   35 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            345789999999999999999999999987654

>PRK08628 short chain dehydrogenase; Provisional

Probab=97.69  E-value=6.3e-05  Score=52.15  Aligned_cols=33  Identities=21%  Similarity=0.299  Sum_probs=29.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.++.++||||+|.+|++++++|+++|++|..+
T Consensus         5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~   37 (258)
T PRK08628          5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIF   37 (258)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEE
Confidence            557899999999999999999999999987654

>PRK06196 oxidoreductase; Provisional

Probab=97.69  E-value=5.7e-05  Score=54.55  Aligned_cols=33  Identities=18%  Similarity=0.215  Sum_probs=29.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus        24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~   56 (315)
T PRK06196         24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVP   56 (315)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            356899999999999999999999999988654

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.69  E-value=6e-05  Score=51.70  Aligned_cols=33  Identities=21%  Similarity=0.196  Sum_probs=29.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++|||++|++|++++++|+++|++|..+
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~   37 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLL   37 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEE
Confidence            345789999999999999999999999987654

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.69  E-value=5.3e-05  Score=60.54  Aligned_cols=34  Identities=29%  Similarity=0.366  Sum_probs=30.3

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ...++.++||||+|+||++++++|++.|++|..+
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval  110 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAG  110 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEE
Confidence            3457889999999999999999999999998765

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.69  E-value=6.9e-05  Score=51.16  Aligned_cols=32  Identities=25%  Similarity=0.146  Sum_probs=28.8

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++||||+|++|+++++.|.+.|++|..+
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~   35 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCIN   35 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            46789999999999999999999999988654

>PRK07102 short chain dehydrogenase; Provisional

Probab=97.68  E-value=6.2e-05  Score=51.85  Aligned_cols=30  Identities=13%  Similarity=0.214  Sum_probs=27.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++||||+|+||+++++.|+++|++|..+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~   31 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLA   31 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEE
Confidence            579999999999999999999999988654

>PLN02253 xanthoxin dehydrogenase

Probab=97.68  E-value=6.7e-05  Score=52.81  Aligned_cols=33  Identities=12%  Similarity=0.224  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus        16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~   48 (280)
T PLN02253         16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIV   48 (280)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEE
Confidence            557899999999999999999999999988654

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=97.68  E-value=6.3e-05  Score=51.41  Aligned_cols=30  Identities=13%  Similarity=0.045  Sum_probs=27.0

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++||||+|+||++++++|++.|++|..+
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~   31 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVN   31 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            479999999999999999999999988653

>PRK07035 short chain dehydrogenase; Provisional

Probab=97.67  E-value=7.3e-05  Score=51.67  Aligned_cols=33  Identities=15%  Similarity=0.266  Sum_probs=29.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|.+.|++|..+
T Consensus         6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~   38 (252)
T PRK07035          6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVS   38 (252)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            456889999999999999999999999987654

>PRK08278 short chain dehydrogenase; Provisional

Probab=97.67  E-value=7e-05  Score=52.98  Aligned_cols=33  Identities=24%  Similarity=0.326  Sum_probs=29.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~   36 (273)
T PRK08278          4 LSGKTLFITGASRGIGLAIALRAARDGANIVIA   36 (273)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            356789999999999999999999999988654

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=97.67  E-value=6.3e-05  Score=52.16  Aligned_cols=30  Identities=20%  Similarity=0.400  Sum_probs=27.0

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+++||||+|++|+++++.|+++|++|..+
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~   30 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIAT   30 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            479999999999999999999999987654

>PRK09134 short chain dehydrogenase; Provisional

Probab=97.67  E-value=7.1e-05  Score=52.10  Aligned_cols=32  Identities=16%  Similarity=0.171  Sum_probs=28.4

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++||||+|+||++++++|.++|++|..+
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~   39 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVH   39 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            45789999999999999999999999887653

>PRK06182 short chain dehydrogenase; Validated

Probab=97.67  E-value=6.9e-05  Score=52.66  Aligned_cols=32  Identities=16%  Similarity=0.237  Sum_probs=28.6

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++++||||+|++|++++++|++.|++|..+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~   33 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGA   33 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            35789999999999999999999999988654

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=97.66  E-value=7.3e-05  Score=51.04  Aligned_cols=31  Identities=19%  Similarity=0.239  Sum_probs=27.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQML   80 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~   80 (84)
                      +++++++||||+|+||+++++.|+++|+.|.
T Consensus         4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~   34 (245)
T PRK12936          4 LSGRKALVTGASGGIGEEIARLLHAQGAIVG   34 (245)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEE
Confidence            3567899999999999999999999998664

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=97.66  E-value=4.3e-05  Score=60.63  Aligned_cols=29  Identities=24%  Similarity=0.274  Sum_probs=26.3

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQML   80 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~   80 (84)
                      .|+|+||||+||||+++++.|.++|++|.
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~  408 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYE  408 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEE
Confidence            36899999999999999999999888873

>PRK07023 short chain dehydrogenase; Provisional

Probab=97.65  E-value=6.8e-05  Score=51.64  Aligned_cols=30  Identities=30%  Similarity=0.392  Sum_probs=27.0

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++||||+|+||++++++|+++|++|..+
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~   31 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGV   31 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEE
Confidence            479999999999999999999999987654

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.64  E-value=7.1e-05  Score=51.12  Aligned_cols=33  Identities=27%  Similarity=0.373  Sum_probs=29.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~   35 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGV   35 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEE
Confidence            456889999999999999999999999987654

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.64  E-value=8e-05  Score=50.98  Aligned_cols=33  Identities=21%  Similarity=0.249  Sum_probs=29.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|.++|++|..+
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~   37 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFN   37 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEE
Confidence            456889999999999999999999999987654

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=97.63  E-value=5.8e-05  Score=56.70  Aligned_cols=30  Identities=30%  Similarity=0.565  Sum_probs=25.9

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++||||+|||||++++.++++.++...+
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~   30 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVV   30 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEE
Confidence            479999999999999999999998775443

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=97.63  E-value=8.8e-05  Score=51.46  Aligned_cols=31  Identities=19%  Similarity=0.240  Sum_probs=28.0

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++||||+|+||+++++.|+++|++|..+
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~   32 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVA   32 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            4689999999999999999999999988655

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=97.63  E-value=8.4e-05  Score=51.12  Aligned_cols=32  Identities=13%  Similarity=0.231  Sum_probs=28.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      +.+++++||||+|+||++++++|+++|++|..
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~   35 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVI   35 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEE
Confidence            34689999999999999999999999998754

>PRK08017 oxidoreductase; Provisional

Probab=97.63  E-value=8.7e-05  Score=51.18  Aligned_cols=30  Identities=27%  Similarity=0.299  Sum_probs=27.1

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++||||+|+||+++++.|.++|++|..+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~   32 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAA   32 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            579999999999999999999999987654

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=97.62  E-value=9.1e-05  Score=50.90  Aligned_cols=31  Identities=16%  Similarity=0.414  Sum_probs=27.8

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      +++.++|||++|+||++++++|+++|++|..
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~   32 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVA   32 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEE
Confidence            4578999999999999999999999988754

>PRK12367 short chain dehydrogenase; Provisional

Probab=97.62  E-value=9.6e-05  Score=52.25  Aligned_cols=35  Identities=26%  Similarity=0.415  Sum_probs=30.6

Q ss_pred             hhhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          48 EFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        48 ~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..+++++++||||+|+||++++++|+++|++|..+
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~   44 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGL   44 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEE
Confidence            34677899999999999999999999999987653

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=97.62  E-value=9e-05  Score=51.67  Aligned_cols=33  Identities=18%  Similarity=0.389  Sum_probs=29.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus         7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~   39 (266)
T PRK06171          7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNA   39 (266)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence            457899999999999999999999999988654

>PRK07063 short chain dehydrogenase; Provisional

Probab=97.61  E-value=9.9e-05  Score=51.33  Aligned_cols=33  Identities=15%  Similarity=0.226  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~   37 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALA   37 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            457899999999999999999999999987654

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=97.61  E-value=8.7e-05  Score=53.66  Aligned_cols=32  Identities=25%  Similarity=0.247  Sum_probs=28.7

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++||||+|+||+++++.|+++|++|..+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~   36 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMA   36 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEE
Confidence            46789999999999999999999999887654

>PRK06924 short chain dehydrogenase; Provisional

Probab=97.61  E-value=8.6e-05  Score=51.19  Aligned_cols=30  Identities=30%  Similarity=0.470  Sum_probs=27.1

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++||||+|++|+.++++|+++|++|..+
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~   31 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISI   31 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEE
Confidence            579999999999999999999999987654

>PRK06101 short chain dehydrogenase; Provisional

Probab=97.61  E-value=8.7e-05  Score=51.32  Aligned_cols=30  Identities=30%  Similarity=0.309  Sum_probs=27.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++||||+|++|++++++|+++|++|..+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~   31 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIAC   31 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEE
Confidence            579999999999999999999999987654

>PRK07060 short chain dehydrogenase; Provisional

Probab=97.61  E-value=9.5e-05  Score=50.57  Aligned_cols=33  Identities=18%  Similarity=0.350  Sum_probs=29.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++|||++|++|+++++.|.++|++|..+
T Consensus         7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~   39 (245)
T PRK07060          7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAA   39 (245)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEE
Confidence            456889999999999999999999999987654

>PRK05876 short chain dehydrogenase; Provisional

Probab=97.61  E-value=9e-05  Score=52.74  Aligned_cols=33  Identities=15%  Similarity=0.176  Sum_probs=29.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|.++|++|..+
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~   36 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLG   36 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            457889999999999999999999999987643

>PRK08267 short chain dehydrogenase; Provisional

Probab=97.60  E-value=9e-05  Score=51.53  Aligned_cols=30  Identities=20%  Similarity=0.183  Sum_probs=27.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++||||+|++|++++++|+++|++|..+
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~   31 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAY   31 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEE
Confidence            579999999999999999999999988654

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=97.60  E-value=5.1e-05  Score=54.84  Aligned_cols=30  Identities=37%  Similarity=0.568  Sum_probs=27.0

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|+|+|++||+|+++.+.|.+.|++|..+
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~   30 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIAT   30 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEe
Confidence            689999999999999999999988777654

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK08643 acetoin reductase; Validated

Probab=97.60  E-value=9.9e-05  Score=51.11  Aligned_cols=31  Identities=16%  Similarity=0.246  Sum_probs=27.9

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++.++||||+|+||+++++.|+++|++|..+
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~   32 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIV   32 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            4689999999999999999999999987654

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.60  E-value=9.7e-05  Score=51.41  Aligned_cols=33  Identities=15%  Similarity=0.221  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||+.++++|++.|++|..+
T Consensus        13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~   45 (258)
T PRK06935         13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIIT   45 (258)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            457899999999999999999999999987654

>PRK12744 short chain dehydrogenase; Provisional

Probab=97.60  E-value=0.00011  Score=51.15  Aligned_cols=33  Identities=24%  Similarity=0.422  Sum_probs=29.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|++.|++|..+
T Consensus         6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i   38 (257)
T PRK12744          6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAI   38 (257)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEE
Confidence            356889999999999999999999999986544

>PRK08219 short chain dehydrogenase; Provisional

Probab=97.60  E-value=9.9e-05  Score=49.85  Aligned_cols=30  Identities=27%  Similarity=0.327  Sum_probs=26.8

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++++||||+|++|+++++.|+++ ++|..+
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~   32 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLG   32 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEE
Confidence            368999999999999999999999 887655

>PRK07856 short chain dehydrogenase; Provisional

Probab=97.60  E-value=9.8e-05  Score=51.22  Aligned_cols=33  Identities=18%  Similarity=0.307  Sum_probs=29.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|.+.|++|..+
T Consensus         4 ~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~   36 (252)
T PRK07856          4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVC   36 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            457899999999999999999999999887543

>PRK06172 short chain dehydrogenase; Provisional

Probab=97.59  E-value=0.0001  Score=50.98  Aligned_cols=33  Identities=12%  Similarity=0.250  Sum_probs=29.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|.++|++|..+
T Consensus         5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~   37 (253)
T PRK06172          5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVA   37 (253)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEE
Confidence            456899999999999999999999999987654

>PRK05867 short chain dehydrogenase; Provisional

Probab=97.59  E-value=0.0001  Score=51.17  Aligned_cols=33  Identities=18%  Similarity=0.223  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|.||++++++|+++|++|..+
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~   39 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIA   39 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            457899999999999999999999999987654

>PRK07775 short chain dehydrogenase; Provisional

Probab=97.59  E-value=0.00011  Score=51.95  Aligned_cols=32  Identities=13%  Similarity=0.112  Sum_probs=28.0

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..+.++||||+|++|++++++|+++|++|..+
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~   40 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFPVALG   40 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            34689999999999999999999999887543

>PRK07825 short chain dehydrogenase; Provisional

Probab=97.59  E-value=9.9e-05  Score=51.76  Aligned_cols=33  Identities=18%  Similarity=0.133  Sum_probs=28.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|.||++++++|+++|++|..+
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~   35 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIG   35 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            346789999999999999999999999987543

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=97.59  E-value=0.00011  Score=51.23  Aligned_cols=33  Identities=30%  Similarity=0.410  Sum_probs=29.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~   36 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVL   36 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            456899999999999999999999999987654

>PRK06398 aldose dehydrogenase; Validated

Probab=97.59  E-value=0.00011  Score=51.59  Aligned_cols=33  Identities=21%  Similarity=0.418  Sum_probs=29.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|.||++++++|.+.|++|..+
T Consensus         4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~   36 (258)
T PRK06398          4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINF   36 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEE
Confidence            457899999999999999999999999988653

>PRK06114 short chain dehydrogenase; Provisional

Probab=97.58  E-value=0.00012  Score=50.99  Aligned_cols=33  Identities=21%  Similarity=0.304  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.++.++||||+|+||++++++|.+.|++|..+
T Consensus         6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~   38 (254)
T PRK06114          6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALF   38 (254)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999988654

>PRK12743 oxidoreductase; Provisional

Probab=97.58  E-value=0.00012  Score=51.06  Aligned_cols=31  Identities=13%  Similarity=0.002  Sum_probs=28.0

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++||||+|+||++++++|+++|++|..+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~   32 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGIT   32 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            4689999999999999999999999988654

>PRK06701 short chain dehydrogenase; Provisional

Probab=97.58  E-value=0.0001  Score=52.89  Aligned_cols=34  Identities=15%  Similarity=0.191  Sum_probs=30.1

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++++||||+|+||++++++|+++|++|..+
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~   76 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIV   76 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            4567899999999999999999999999987654

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.57  E-value=0.00012  Score=50.85  Aligned_cols=33  Identities=30%  Similarity=0.475  Sum_probs=29.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|.+.|++|..+
T Consensus         5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~   37 (255)
T PRK06463          5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVL   37 (255)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence            456899999999999999999999999988654

>PRK05866 short chain dehydrogenase; Provisional

Probab=97.56  E-value=0.00012  Score=52.65  Aligned_cols=33  Identities=18%  Similarity=0.384  Sum_probs=29.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus        38 ~~~k~vlItGasggIG~~la~~La~~G~~Vi~~   70 (293)
T PRK05866         38 LTGKRILLTGASSGIGEAAAEQFARRGATVVAV   70 (293)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>PRK07024 short chain dehydrogenase; Provisional

Probab=97.56  E-value=0.00011  Score=51.10  Aligned_cols=30  Identities=30%  Similarity=0.365  Sum_probs=27.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++||||+|+||++++++|+++|++|..+
T Consensus         3 ~~vlItGas~gIG~~la~~l~~~G~~v~~~   32 (257)
T PRK07024          3 LKVFITGASSGIGQALAREYARQGATLGLV   32 (257)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCEEEEE
Confidence            689999999999999999999999987654

>PRK08251 short chain dehydrogenase; Provisional

Probab=97.56  E-value=0.00012  Score=50.31  Aligned_cols=30  Identities=23%  Similarity=0.296  Sum_probs=26.9

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      +++++||||+|+||++++++|+++|++|..
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~   31 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLAL   31 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEE
Confidence            467999999999999999999999987754

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=97.55  E-value=0.00012  Score=51.21  Aligned_cols=34  Identities=21%  Similarity=0.232  Sum_probs=30.2

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++++||||++.||+++++.|++.|++|..+
T Consensus         5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~   38 (260)
T PRK08416          5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFT   38 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            3567899999999999999999999999987654

>PRK08589 short chain dehydrogenase; Validated

Probab=97.55  E-value=0.00013  Score=51.45  Aligned_cols=33  Identities=21%  Similarity=0.259  Sum_probs=29.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|.||++++++|+++|++|..+
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~   36 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAV   36 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            457899999999999999999999999988755

>PRK07074 short chain dehydrogenase; Provisional

Probab=97.55  E-value=0.00013  Score=50.57  Aligned_cols=31  Identities=32%  Similarity=0.583  Sum_probs=27.5

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++||||+|+||++++++|+++|++|..+
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~   32 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLAL   32 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEE
Confidence            4679999999999999999999999887554

>PRK06181 short chain dehydrogenase; Provisional

Probab=97.55  E-value=0.00013  Score=50.68  Aligned_cols=30  Identities=33%  Similarity=0.447  Sum_probs=27.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++||||+|++|++++++|+++|++|..+
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~   31 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLA   31 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEE
Confidence            579999999999999999999999987654

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=97.54  E-value=0.00014  Score=51.08  Aligned_cols=33  Identities=30%  Similarity=0.503  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|++|++++++|+++|++|..+
T Consensus         8 ~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~   40 (278)
T PRK08277          8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAIL   40 (278)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            457899999999999999999999999987654

>PRK09620 hypothetical protein; Provisional

Probab=97.53  E-value=0.00014  Score=51.83  Aligned_cols=33  Identities=27%  Similarity=0.529  Sum_probs=28.6

Q ss_pred             ccceEEEecc----------------CcchHHHHHHHHHHcCCceEEEE
Q psy8179          51 KDQTVFITGA----------------TGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        51 ~~~~vlitGa----------------tGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+++|+||+|                |||+|+++++.|+++|++|..|+
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~   50 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLH   50 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEe
Confidence            5678899965                49999999999999999998664

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.53  E-value=0.00013  Score=51.67  Aligned_cols=31  Identities=16%  Similarity=0.269  Sum_probs=27.9

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++||||+|++|++++++|.++|++|..+
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~   34 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFAT   34 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            4689999999999999999999999988654

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=97.53  E-value=0.00014  Score=49.50  Aligned_cols=30  Identities=17%  Similarity=0.341  Sum_probs=26.9

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.++||||+|++|++++++|+++|++|..+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~   30 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAAN   30 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            468999999999999999999999987654

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=97.53  E-value=0.00014  Score=50.38  Aligned_cols=33  Identities=21%  Similarity=0.326  Sum_probs=29.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|.||++++++|+++|++|..+
T Consensus         7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~   39 (254)
T PRK08085          7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIIN   39 (254)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEE
Confidence            457889999999999999999999999887643

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=97.53  E-value=0.00016  Score=50.11  Aligned_cols=33  Identities=21%  Similarity=0.239  Sum_probs=29.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||+.++++|+++|++|..+
T Consensus         9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~   41 (256)
T PRK06124          9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVN   41 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEE
Confidence            467899999999999999999999999987654

>PRK05865 hypothetical protein; Provisional

Probab=97.53  E-value=0.0001  Score=61.22  Aligned_cols=30  Identities=30%  Similarity=0.509  Sum_probs=27.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|+||||+||+|++++++|+++|++|..+
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l   30 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGI   30 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEE
Confidence            479999999999999999999999998754

>PRK06123 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.00014  Score=49.97  Aligned_cols=31  Identities=16%  Similarity=0.038  Sum_probs=27.2

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++.++||||+|+||++++++|+++|+.|..+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~   32 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLN   32 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEe
Confidence            3579999999999999999999999887543

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.00013  Score=51.26  Aligned_cols=30  Identities=20%  Similarity=0.302  Sum_probs=27.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++||||+|++|++++++|.+.|++|..+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~   31 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWAT   31 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEE
Confidence            579999999999999999999999988654

>PRK08265 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.00015  Score=50.87  Aligned_cols=33  Identities=12%  Similarity=0.341  Sum_probs=29.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|.||++++++|+++|++|..+
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~   36 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIV   36 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            456899999999999999999999999987654

>PRK07985 oxidoreductase; Provisional

Probab=97.51  E-value=0.00014  Score=52.23  Aligned_cols=33  Identities=18%  Similarity=0.199  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~   79 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAIS   79 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEe
Confidence            456899999999999999999999999998654

>PRK07062 short chain dehydrogenase; Provisional

Probab=97.51  E-value=0.00017  Score=50.22  Aligned_cols=33  Identities=21%  Similarity=0.270  Sum_probs=29.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++.++||||+|+||++++++|+++|++|..+
T Consensus         6 l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~   38 (265)
T PRK07062          6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAIC   38 (265)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEE
Confidence            457899999999999999999999999988654

>PRK07576 short chain dehydrogenase; Provisional

Probab=97.51  E-value=0.00017  Score=50.74  Aligned_cols=33  Identities=12%  Similarity=0.227  Sum_probs=29.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus         7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~   39 (264)
T PRK07576          7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVA   39 (264)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            456899999999999999999999999988654

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=97.50  E-value=0.00017  Score=50.08  Aligned_cols=33  Identities=15%  Similarity=0.197  Sum_probs=29.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|.++|++|..+
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~   41 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVS   41 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEE
Confidence            457899999999999999999999999887654

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=97.50  E-value=0.00011  Score=54.57  Aligned_cols=27  Identities=52%  Similarity=0.752  Sum_probs=22.9

Q ss_pred             EEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          55 VFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        55 vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      |+||||+|+||+.++++|++.++.-..
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~li   27 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLI   27 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEE
Confidence            799999999999999999998775433

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK08177 short chain dehydrogenase; Provisional

Probab=97.50  E-value=0.00015  Score=49.54  Aligned_cols=30  Identities=37%  Similarity=0.365  Sum_probs=27.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++||||+|++|++++++|.++|++|..+
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~   31 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTAT   31 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEE
Confidence            579999999999999999999999988654

>PRK07478 short chain dehydrogenase; Provisional

Probab=97.49  E-value=0.00019  Score=49.77  Aligned_cols=33  Identities=18%  Similarity=0.224  Sum_probs=29.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|.||.+++++|.+.|++|..+
T Consensus         4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~   36 (254)
T PRK07478          4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVG   36 (254)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence            356789999999999999999999999987654

>KOG1430|consensus

Probab=97.49  E-value=0.00013  Score=55.48  Aligned_cols=31  Identities=39%  Similarity=0.610  Sum_probs=25.8

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcC--CceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCC--PQMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g--~~V~~   81 (84)
                      +..+|+||||+||+|.|++++|++.+  .+|+.
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv   35 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRV   35 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEE
Confidence            34679999999999999999999987  44443

>PRK07454 short chain dehydrogenase; Provisional

Probab=97.49  E-value=0.00017  Score=49.48  Aligned_cols=31  Identities=16%  Similarity=0.153  Sum_probs=27.8

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++++||||+|++|+.++++|+++|++|..+
T Consensus         6 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~   36 (241)
T PRK07454          6 MPRALITGASSGIGKATALAFAKAGWDLALV   36 (241)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            4689999999999999999999999987654

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=97.47  E-value=0.00019  Score=49.38  Aligned_cols=30  Identities=20%  Similarity=0.012  Sum_probs=27.1

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++||||+|+||+.+++.|++.|++|..+
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~   32 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGIN   32 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEE
Confidence            579999999999999999999999887544

>PRK06953 short chain dehydrogenase; Provisional

Probab=97.47  E-value=0.00017  Score=49.18  Aligned_cols=30  Identities=23%  Similarity=0.269  Sum_probs=27.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++||||+|++|++++++|+++|++|..+
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~   31 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIAT   31 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEE
Confidence            579999999999999999999999987654

>PRK05854 short chain dehydrogenase; Provisional

Probab=97.45  E-value=0.0002  Score=52.04  Aligned_cols=33  Identities=21%  Similarity=0.271  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||++.||.+++++|+++|++|..+
T Consensus        12 l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~   44 (313)
T PRK05854         12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILP   44 (313)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999987643

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=97.45  E-value=0.00022  Score=49.73  Aligned_cols=33  Identities=18%  Similarity=0.233  Sum_probs=29.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|.||++++++|++.|++|..+
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~   37 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVIN   37 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999887543

>PRK05650 short chain dehydrogenase; Provisional

Probab=97.44  E-value=0.0002  Score=50.26  Aligned_cols=30  Identities=27%  Similarity=0.240  Sum_probs=26.9

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++||||+|+||++++++|.++|++|..+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~   30 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALA   30 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEE
Confidence            469999999999999999999999987654

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.44  E-value=0.00021  Score=49.92  Aligned_cols=33  Identities=18%  Similarity=0.289  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||++.||+.++++|+++|++|..+
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~   38 (251)
T PRK12481          6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGV   38 (251)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEe
Confidence            457899999999999999999999999988653

>PRK06198 short chain dehydrogenase; Provisional

Probab=97.43  E-value=0.00022  Score=49.35  Aligned_cols=32  Identities=16%  Similarity=0.278  Sum_probs=28.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCc-eEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQ-MLS   81 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~-V~~   81 (84)
                      +++++++||||+|+||++++++|.++|++ |..
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~   36 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVI   36 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEE
Confidence            56788999999999999999999999988 654

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.43  E-value=0.00023  Score=51.43  Aligned_cols=33  Identities=21%  Similarity=0.191  Sum_probs=29.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus        10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~   42 (306)
T PRK07792         10 LSGKVAVVTGAAAGLGRAEALGLARLGATVVVN   42 (306)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEe
Confidence            567899999999999999999999999987654

>PRK09242 tropinone reductase; Provisional

Probab=97.43  E-value=0.00024  Score=49.26  Aligned_cols=33  Identities=27%  Similarity=0.380  Sum_probs=29.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|.||++++++|.++|++|..+
T Consensus         7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~   39 (257)
T PRK09242          7 LDGQTALITGASKGIGLAIAREFLGLGADVLIV   39 (257)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEE
Confidence            467899999999999999999999999987654

>PRK06483 dihydromonapterin reductase; Provisional

Probab=97.42  E-value=0.00026  Score=48.58  Aligned_cols=31  Identities=26%  Similarity=0.269  Sum_probs=27.9

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++++||||+|.||++++++|+++|++|..+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~   32 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVS   32 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEE
Confidence            4689999999999999999999999988654

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.40  E-value=0.00026  Score=48.42  Aligned_cols=33  Identities=27%  Similarity=0.383  Sum_probs=28.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++|||++|++|+++++.|.++|++|..+
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~   35 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALI   35 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            356789999999999999999999999877543

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=97.39  E-value=0.00027  Score=49.41  Aligned_cols=33  Identities=18%  Similarity=0.224  Sum_probs=29.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|++|++++++|+++|++|..+
T Consensus         8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~   40 (265)
T PRK07097          8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFN   40 (265)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEE
Confidence            456889999999999999999999999987543

>PRK08339 short chain dehydrogenase; Provisional

Probab=97.38  E-value=0.0003  Score=49.56  Aligned_cols=33  Identities=18%  Similarity=0.229  Sum_probs=29.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|.||+.++++|+++|++|..+
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~   38 (263)
T PRK08339          6 LSGKLAFTTASSKGIGFGVARVLARAGADVILL   38 (263)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999988654

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=97.37  E-value=0.00023  Score=54.48  Aligned_cols=25  Identities=48%  Similarity=0.781  Sum_probs=22.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      ++|++||||||+|.+++..|+.+-+
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~   25 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSD   25 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCC
Confidence            3699999999999999999998754

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=97.34  E-value=0.00034  Score=47.73  Aligned_cols=30  Identities=23%  Similarity=0.358  Sum_probs=27.0

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++|||++|++|++++++|.++|++|..+
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~   32 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIAT   32 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEE
Confidence            579999999999999999999999887654

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=97.33  E-value=0.00034  Score=48.70  Aligned_cols=33  Identities=15%  Similarity=0.222  Sum_probs=29.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.++.++|||++|.||++++++|.+.|++|..+
T Consensus         8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~   40 (253)
T PRK08993          8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGI   40 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEe
Confidence            557899999999999999999999999987643

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=97.33  E-value=0.0003  Score=53.97  Aligned_cols=33  Identities=36%  Similarity=0.568  Sum_probs=29.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|.++|++|..+
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l  208 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVAL  208 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            457899999999999999999999999988654

>PRK07069 short chain dehydrogenase; Validated

Probab=97.32  E-value=0.0003  Score=48.22  Aligned_cols=28  Identities=29%  Similarity=0.470  Sum_probs=25.8

Q ss_pred             EEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          55 VFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        55 vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++||||+|++|+++++.|+++|++|..+
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~   29 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLT   29 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            7999999999999999999999988654

>TIGR02415 23BDH acetoin reductases

Probab=97.32  E-value=0.00037  Score=47.97  Aligned_cols=30  Identities=17%  Similarity=0.218  Sum_probs=26.8

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++|||++|+||.+++++|++.|++|..+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~   30 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVA   30 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            469999999999999999999999887554

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=97.31  E-value=0.00026  Score=48.03  Aligned_cols=28  Identities=21%  Similarity=0.322  Sum_probs=25.3

Q ss_pred             EEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          55 VFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        55 vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|||++|++|++++++|+++|++|..+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~   28 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIIT   28 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            5899999999999999999999987654

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=97.30  E-value=0.00034  Score=48.23  Aligned_cols=29  Identities=34%  Similarity=0.447  Sum_probs=26.7

Q ss_pred             EEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          55 VFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        55 vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      |+|+||||.+|+++++.|++.+++|+.+.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~   29 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALV   29 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEE
Confidence            68999999999999999999999998764

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.29  E-value=0.00036  Score=51.30  Aligned_cols=33  Identities=27%  Similarity=0.311  Sum_probs=29.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++.++||||+|.||+.++++|+++|++|..+
T Consensus         6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~   38 (334)
T PRK07109          6 IGRQVVVITGASAGVGRATARAFARRGAKVVLL   38 (334)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            456789999999999999999999999987654

>PRK07904 short chain dehydrogenase; Provisional

Probab=97.29  E-value=0.00039  Score=48.85  Aligned_cols=33  Identities=21%  Similarity=0.370  Sum_probs=28.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcC-CceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCC-PQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g-~~V~~I   82 (84)
                      .+.++++||||+|.+|++++++|+++| ++|..+
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~   39 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLA   39 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEE
Confidence            356789999999999999999999985 777543

>PRK07677 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.00045  Score=47.90  Aligned_cols=31  Identities=16%  Similarity=0.340  Sum_probs=27.6

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++||||+|.+|+++++.|.++|++|..+
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~   31 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVIT   31 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence            3689999999999999999999999987554

>PRK07831 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.00064  Score=47.37  Aligned_cols=34  Identities=21%  Similarity=0.334  Sum_probs=29.1

Q ss_pred             hhccceEEEeccCcc-hHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGF-LGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGf-iG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+++++||||+|+ ||+.+++.|+++|++|..+
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~   48 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVIS   48 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEE
Confidence            355789999999985 9999999999999987543

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.28  E-value=0.00045  Score=47.97  Aligned_cols=32  Identities=16%  Similarity=0.234  Sum_probs=27.8

Q ss_pred             ccceEEEeccCc--chHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATG--FLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatG--fiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++.++||||+|  .+|+.++++|+++|++|..+
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~   37 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFT   37 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEE
Confidence            467899999996  59999999999999987654

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=97.27  E-value=0.0004  Score=48.69  Aligned_cols=30  Identities=20%  Similarity=0.202  Sum_probs=27.1

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.++||||+|+||++++++|+++|++|..+
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~   31 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLH   31 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEE
Confidence            468999999999999999999999988654

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=97.26  E-value=0.00042  Score=47.37  Aligned_cols=27  Identities=30%  Similarity=0.609  Sum_probs=23.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCce
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQM   79 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V   79 (84)
                      |+++||||+|+||++++++|.++++.+
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~   27 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDA   27 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCC
Confidence            479999999999999999999986443

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.24  E-value=0.0005  Score=43.88  Aligned_cols=29  Identities=34%  Similarity=0.528  Sum_probs=24.8

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +|.|.|||||+|+.+++.|.++ +++..++
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~h-p~~e~~~   29 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEH-PDFELVA   29 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHT-STEEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHhcC-CCccEEE
Confidence            5889999999999999999995 7776554

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK05884 short chain dehydrogenase; Provisional

Probab=97.22  E-value=0.00054  Score=47.29  Aligned_cols=30  Identities=20%  Similarity=0.232  Sum_probs=27.0

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++||||+|.+|+++++.|.++|++|..+
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~   30 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLV   30 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEE
Confidence            368999999999999999999999988654

>PRK05872 short chain dehydrogenase; Provisional

Probab=97.22  E-value=0.00057  Score=49.01  Aligned_cols=33  Identities=21%  Similarity=0.294  Sum_probs=29.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|.||..+++.|.+.|++|..+
T Consensus         7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~   39 (296)
T PRK05872          7 LAGKVVVVTGAARGIGAELARRLHARGAKLALV   39 (296)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999987544

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=97.20  E-value=0.00042  Score=47.39  Aligned_cols=28  Identities=21%  Similarity=0.273  Sum_probs=25.4

Q ss_pred             EEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          55 VFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        55 vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++||||+|+||.++++.|.++|++|..+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~   28 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVH   28 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            5899999999999999999999987654

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07832 short chain dehydrogenase; Provisional

Probab=97.19  E-value=0.00055  Score=48.13  Aligned_cols=30  Identities=20%  Similarity=0.297  Sum_probs=26.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++||||+|.+|.+++++|+++|++|..+
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~   30 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLT   30 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            468999999999999999999999887543

>PRK08309 short chain dehydrogenase; Provisional

Probab=97.16  E-value=0.0006  Score=46.70  Aligned_cols=29  Identities=17%  Similarity=0.176  Sum_probs=25.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |.++|||||||+|. +++.|.+.|++|..+
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~   29 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVI   29 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEE
Confidence            46899999999987 999999999998754

>PLN02780 ketoreductase/ oxidoreductase

Probab=97.14  E-value=0.00068  Score=49.69  Aligned_cols=32  Identities=19%  Similarity=0.178  Sum_probs=28.8

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++.++||||+|.||++++++|.++|++|..+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~   83 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLV   83 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEE
Confidence            36889999999999999999999999988654

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=97.10  E-value=0.00068  Score=54.61  Aligned_cols=33  Identities=18%  Similarity=0.302  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|++.|++|..+
T Consensus       412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~  444 (676)
T TIGR02632       412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLA  444 (676)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEE
Confidence            567899999999999999999999999988654

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=97.10  E-value=0.00076  Score=47.01  Aligned_cols=30  Identities=17%  Similarity=0.243  Sum_probs=27.0

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+++||||+|.||+.++++|+++|++|..+
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~   30 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVIS   30 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEE
Confidence            479999999999999999999999987654

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=97.09  E-value=0.00098  Score=42.36  Aligned_cols=26  Identities=35%  Similarity=0.304  Sum_probs=23.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCc
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQ   78 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~   78 (84)
                      ++++||||+|++|.+++++|.++|+.
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~   26 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGAR   26 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCC
Confidence            46899999999999999999998864

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.08  E-value=0.00074  Score=49.83  Aligned_cols=33  Identities=24%  Similarity=0.315  Sum_probs=29.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.++.++||||+|.||++++++|.++|++|..+
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~   37 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARRGARLVLA   37 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            456889999999999999999999999987654

>PRK06125 short chain dehydrogenase; Provisional

Probab=97.07  E-value=0.0011  Score=46.20  Aligned_cols=33  Identities=21%  Similarity=0.228  Sum_probs=29.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++|||++|.+|.++++.|.+.|++|..+
T Consensus         5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~   37 (259)
T PRK06125          5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLV   37 (259)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEE
Confidence            456899999999999999999999999887654

>PRK07201 short chain dehydrogenase; Provisional

Probab=97.06  E-value=0.00078  Score=52.78  Aligned_cols=33  Identities=21%  Similarity=0.283  Sum_probs=29.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus       369 ~~~k~vlItGas~giG~~la~~l~~~G~~V~~~  401 (657)
T PRK07201        369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLV  401 (657)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            456889999999999999999999999987654

>PRK05855 short chain dehydrogenase; Validated

Probab=97.04  E-value=0.00087  Score=51.00  Aligned_cols=33  Identities=18%  Similarity=0.250  Sum_probs=29.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|.++|++|..+
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~  345 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVAS  345 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEE
Confidence            456789999999999999999999999987654

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.04  E-value=0.0006  Score=51.42  Aligned_cols=27  Identities=33%  Similarity=0.272  Sum_probs=24.2

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHc
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRC   75 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~   75 (84)
                      .+.+++|+||||+|++|+.++++|.++
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~  178 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAK  178 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhh
Confidence            457799999999999999999999864

>PRK06720 hypothetical protein; Provisional

Probab=97.02  E-value=0.0013  Score=44.56  Aligned_cols=34  Identities=12%  Similarity=0.090  Sum_probs=30.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ++++.++||||++.||..+++.|.+.|++|..++
T Consensus        14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~   47 (169)
T PRK06720         14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTD   47 (169)
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEE
Confidence            4678999999999999999999999999886553

>PRK07791 short chain dehydrogenase; Provisional

Probab=96.98  E-value=0.0012  Score=47.29  Aligned_cols=33  Identities=18%  Similarity=0.212  Sum_probs=29.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||++.||+.++++|++.|++|..+
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~   36 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVN   36 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEe
Confidence            467899999999999999999999999987554

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=96.98  E-value=0.00096  Score=56.35  Aligned_cols=25  Identities=56%  Similarity=0.858  Sum_probs=23.2

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcC
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCC   76 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g   76 (84)
                      .++|+|||||||+|++++++|++++
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~  995 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRR  995 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcC
Confidence            4789999999999999999999876

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK07041 short chain dehydrogenase; Provisional

Probab=96.97  E-value=0.00081  Score=45.72  Aligned_cols=27  Identities=11%  Similarity=0.167  Sum_probs=24.5

Q ss_pred             EEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          56 FITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        56 litGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +||||+|++|++++++|+++|++|..+
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~   27 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIA   27 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEE
Confidence            589999999999999999999988654

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=96.89  E-value=0.0014  Score=47.94  Aligned_cols=33  Identities=30%  Similarity=0.426  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++++++|||||+=||..++++|.++|++|..|
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLv   36 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILV   36 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            456889999999999999999999999998754

>PRK08303 short chain dehydrogenase; Provisional

Probab=96.87  E-value=0.0017  Score=47.20  Aligned_cols=33  Identities=15%  Similarity=0.159  Sum_probs=29.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.++.++||||++-||..++++|++.|++|..+
T Consensus         6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~   38 (305)
T PRK08303          6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVT   38 (305)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999987654

>PRK08324 short chain dehydrogenase; Validated

Probab=96.86  E-value=0.0014  Score=52.56  Aligned_cols=33  Identities=18%  Similarity=0.265  Sum_probs=29.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.++.++||||+|+||++++++|.+.|++|..+
T Consensus       420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~  452 (681)
T PRK08324        420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLA  452 (681)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEE
Confidence            467899999999999999999999999987654

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.86  E-value=0.0019  Score=45.05  Aligned_cols=33  Identities=15%  Similarity=0.330  Sum_probs=28.6

Q ss_pred             hccceEEEeccCc--chHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATG--FLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatG--fiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|  .||++++++|+++|++|..+
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~   38 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFT   38 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEE
Confidence            4578999999996  79999999999999887543

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.74  E-value=0.0022  Score=48.48  Aligned_cols=33  Identities=24%  Similarity=0.382  Sum_probs=29.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..+++++||||+|.||..+++.|.++|++|..+
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~  240 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCL  240 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE
Confidence            457899999999999999999999999987654

>PRK06484 short chain dehydrogenase; Validated

Probab=96.73  E-value=0.0025  Score=48.76  Aligned_cols=33  Identities=18%  Similarity=0.304  Sum_probs=29.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..++.++||||+|.||..++++|.++|++|..+
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~  299 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLII  299 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999988654

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.62  E-value=0.0033  Score=43.97  Aligned_cols=33  Identities=3%  Similarity=0.043  Sum_probs=29.4

Q ss_pred             hccceEEEeccC--cchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGAT--GFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGat--GfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++.++||||+  +=||..++++|++.|++|..+
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~   39 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYT   39 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEe
Confidence            467899999999  789999999999999988654

>PRK07578 short chain dehydrogenase; Provisional

Probab=96.62  E-value=0.0033  Score=42.15  Aligned_cols=28  Identities=21%  Similarity=0.535  Sum_probs=24.5

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      ++++||||+|.+|++++++|.++ ++|..
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~   28 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVIT   28 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEE
Confidence            46999999999999999999988 76654

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=96.61  E-value=0.003  Score=44.81  Aligned_cols=25  Identities=24%  Similarity=0.409  Sum_probs=22.8

Q ss_pred             ccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          59 GATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        59 GatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+|||+|+++++.|+++|++|..++
T Consensus        23 ~SSG~iG~aLA~~L~~~G~~V~li~   47 (229)
T PRK06732         23 HSTGQLGKIIAETFLAAGHEVTLVT   47 (229)
T ss_pred             ccchHHHHHHHHHHHhCCCEEEEEE
Confidence            6899999999999999999998764

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=96.59  E-value=0.0038  Score=45.31  Aligned_cols=31  Identities=29%  Similarity=0.274  Sum_probs=27.5

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcC-CceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCC-PQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g-~~V~~I   82 (84)
                      .++++||||++.||.+++++|+++| ++|..+
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~   34 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMA   34 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEE
Confidence            4689999999999999999999999 877543

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.56  E-value=0.004  Score=44.28  Aligned_cols=33  Identities=9%  Similarity=0.085  Sum_probs=29.2

Q ss_pred             hccceEEEeccCc--chHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATG--FLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatG--fiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++.++||||++  =||+.++++|++.|++|..+
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~   39 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFT   39 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEe
Confidence            4678999999996  89999999999999988654

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=96.53  E-value=0.0038  Score=47.03  Aligned_cols=32  Identities=34%  Similarity=0.425  Sum_probs=29.7

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .|+.+|||-||.-|+.+.+.|+++||+|..++
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~   33 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIK   33 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEe
Confidence            47889999999999999999999999998875

>PRK06484 short chain dehydrogenase; Validated

Probab=96.53  E-value=0.0037  Score=47.79  Aligned_cols=32  Identities=25%  Similarity=0.458  Sum_probs=29.0

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++||||++.||..++++|.++|++|..+
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~   35 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVA   35 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            56889999999999999999999999988654

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.51  E-value=0.0053  Score=43.05  Aligned_cols=33  Identities=3%  Similarity=-0.032  Sum_probs=28.9

Q ss_pred             hccceEEEeccC--cchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGAT--GFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGat--GfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++.++||||+  +-||+.++++|++.|++|..+
T Consensus         8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~   42 (258)
T PRK07533          8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVT   42 (258)
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEE
Confidence            567899999998  589999999999999987654

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.44  E-value=0.0053  Score=43.20  Aligned_cols=33  Identities=9%  Similarity=0.096  Sum_probs=28.7

Q ss_pred             hccceEEEecc--CcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGA--TGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGa--tGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++.++||||  ++-||+.+++.|+++|++|...
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~   38 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFT   38 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEE
Confidence            56789999997  6799999999999999988654

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=96.40  E-value=0.0065  Score=39.19  Aligned_cols=28  Identities=36%  Similarity=0.503  Sum_probs=24.5

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQML   80 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~   80 (84)
                      |.++||||++=||..++++|+++|..+.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v   28 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVV   28 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEE
Confidence            5799999999999999999999965443

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=96.33  E-value=0.0052  Score=47.14  Aligned_cols=34  Identities=21%  Similarity=0.278  Sum_probs=31.0

Q ss_pred             hccceEEEecc----------------CcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGA----------------TGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGa----------------tGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.+++++||||                +|.+|..+++.|.+.|++|..++
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~  235 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVS  235 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeC
Confidence            57899999999                99999999999999999997664

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=96.32  E-value=0.0071  Score=41.10  Aligned_cols=33  Identities=24%  Similarity=0.309  Sum_probs=28.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++|.||+|.+|+.+++.|.+.|++|..+
T Consensus        26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~   58 (194)
T cd01078          26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLV   58 (194)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            456889999999999999999999998877643

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.28  E-value=0.0052  Score=45.70  Aligned_cols=27  Identities=26%  Similarity=0.283  Sum_probs=24.1

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCce
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQM   79 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V   79 (84)
                      ++|.|.|||||+|..+++.|.+++|.+
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~   28 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPV   28 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCc
Confidence            579999999999999999999977654

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=96.25  E-value=0.0083  Score=42.11  Aligned_cols=33  Identities=9%  Similarity=0.114  Sum_probs=28.5

Q ss_pred             hccceEEEeccC--cchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGAT--GFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGat--GfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.++.++||||+  +=||..++++|.+.|++|..+
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~   38 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGIT   38 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEE
Confidence            356889999986  789999999999999998654

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.24  E-value=0.0082  Score=42.21  Aligned_cols=33  Identities=9%  Similarity=0.128  Sum_probs=29.0

Q ss_pred             hccceEEEeccC--cchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGAT--GFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGat--GfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.++.++||||+  +=||..++++|++.|++|..+
T Consensus         5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~   39 (257)
T PRK08594          5 LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFT   39 (257)
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEe
Confidence            457899999997  899999999999999988654

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=96.24  E-value=0.0076  Score=42.82  Aligned_cols=31  Identities=23%  Similarity=0.363  Sum_probs=28.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      |+|.|.||||-+|+++++....+||+|+.|.
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAiv   31 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIV   31 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEE
Confidence            4688999999999999999999999998874

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.23  E-value=0.0064  Score=45.65  Aligned_cols=30  Identities=30%  Similarity=0.307  Sum_probs=25.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+|.|+|||||+|..+++.|.++++.+..+
T Consensus         5 ~~IaIvGATG~vG~eLlrlL~~~~hP~~~l   34 (336)
T PRK05671          5 LDIAVVGATGTVGEALVQILEERDFPVGTL   34 (336)
T ss_pred             CEEEEEccCCHHHHHHHHHHhhCCCCceEE
Confidence            579999999999999999999866655443

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.22  E-value=0.0089  Score=42.40  Aligned_cols=33  Identities=9%  Similarity=0.188  Sum_probs=28.7

Q ss_pred             hccceEEEeccCc--chHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATG--FLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatG--fiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++.++||||++  =||+.+++.|++.|++|..+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~   38 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFT   38 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEE
Confidence            5678999999985  89999999999999987643

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=96.21  E-value=0.009  Score=41.07  Aligned_cols=33  Identities=18%  Similarity=0.320  Sum_probs=29.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..++.++||||++-||..+++.|.+.|+.|..+
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~   35 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVA   35 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEE
Confidence            456889999999999999999999999886654

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.19  E-value=0.0098  Score=41.80  Aligned_cols=33  Identities=9%  Similarity=0.100  Sum_probs=28.4

Q ss_pred             hccceEEEeccCc--chHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATG--FLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatG--fiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.++.++||||++  =||..++++|.++|++|...
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~   40 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFT   40 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEE
Confidence            4568899999996  69999999999999987643

>PRK08862 short chain dehydrogenase; Provisional

Probab=96.14  E-value=0.0094  Score=41.44  Aligned_cols=33  Identities=21%  Similarity=0.296  Sum_probs=29.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++.++||||++=||..++++|.++|++|..+
T Consensus         3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~   35 (227)
T PRK08862          3 IKSSIILITSAGSVLGRTISCHFARLGATLILC   35 (227)
T ss_pred             CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEE
Confidence            456899999999999999999999999987654

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.11  E-value=0.0098  Score=41.71  Aligned_cols=32  Identities=6%  Similarity=0.141  Sum_probs=28.4

Q ss_pred             hccceEEEecc--CcchHHHHHHHHHHcCCceEE
Q psy8179          50 YKDQTVFITGA--TGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        50 ~~~~~vlitGa--tGfiG~~l~~~ll~~g~~V~~   81 (84)
                      +.++.++||||  ++-||..++++|++.|++|..
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l   38 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVL   38 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEE
Confidence            45689999999  899999999999999998754

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.07  E-value=0.012  Score=42.06  Aligned_cols=33  Identities=9%  Similarity=0.078  Sum_probs=28.6

Q ss_pred             hccceEEEeccC--cchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGAT--GFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGat--GfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.++.++||||+  +=||..++++|.+.|++|..+
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~   37 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFT   37 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEE
Confidence            356899999997  789999999999999987654

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.05  E-value=0.011  Score=42.09  Aligned_cols=34  Identities=6%  Similarity=0.009  Sum_probs=29.3

Q ss_pred             hhccceEEEeccC--cchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGAT--GFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGat--GfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++++.++||||+  +=||..+++.|++.|++|..+
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~   42 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFT   42 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEE
Confidence            3567899999997  789999999999999988644

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=95.94  E-value=0.014  Score=40.68  Aligned_cols=29  Identities=17%  Similarity=0.283  Sum_probs=25.0

Q ss_pred             eEEEeccCcchHHHHHHHHHH----cCCceEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLR----CCPQMLSL   82 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~----~g~~V~~I   82 (84)
                      .++||||++.||.+++++|.+    .|++|..+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~   34 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLS   34 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEE
Confidence            589999999999999999997    68877554

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.93  E-value=0.014  Score=41.02  Aligned_cols=33  Identities=12%  Similarity=0.113  Sum_probs=28.5

Q ss_pred             hccceEEEecc--CcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGA--TGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGa--tGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.++.++||||  ++=||..++++|++.|++|..+
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~   38 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFT   38 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEE
Confidence            45788999996  5789999999999999998654

>KOG0747|consensus

Probab=95.91  E-value=0.0057  Score=45.94  Aligned_cols=31  Identities=32%  Similarity=0.622  Sum_probs=25.6

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++++||||+|||||+.+..+..+-++...|
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v   36 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFV   36 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEE
Confidence            3789999999999999999998875554444

>KOG1203|consensus

Probab=95.89  E-value=0.011  Score=45.84  Aligned_cols=33  Identities=36%  Similarity=0.454  Sum_probs=29.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+...|+|+||||.+|+.+++.|++.|+.|+.+
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~  109 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRAL  109 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeeee
Confidence            445789999999999999999999999998765

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=95.84  E-value=0.011  Score=42.88  Aligned_cols=29  Identities=21%  Similarity=0.209  Sum_probs=25.7

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|+|+||||+ |+.+++.|.+.|++|...
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s   29 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVT   29 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEE
Confidence            57999999999 999999999999887643

This enzyme was found to be a monomer by gel filtration.

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=95.77  E-value=0.016  Score=42.21  Aligned_cols=31  Identities=23%  Similarity=0.336  Sum_probs=28.1

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      ++|.++|||||+=||..+++.|.+.|++|..
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl   35 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVL   35 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEE
Confidence            4578999999999999999999999998754

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.70  E-value=0.014  Score=43.61  Aligned_cols=23  Identities=39%  Similarity=0.469  Sum_probs=21.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC   75 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~   75 (84)
                      .+|.|.|||||+|+.+++.|..+
T Consensus         4 ~~V~I~GatG~iG~~l~~~L~~~   26 (349)
T PRK08664          4 LKVGILGATGMVGQRFVQLLANH   26 (349)
T ss_pred             cEEEEECCCCHHHHHHHHHHHcC
Confidence            57999999999999999999875

>PRK06940 short chain dehydrogenase; Provisional

Probab=95.70  E-value=0.017  Score=41.03  Aligned_cols=29  Identities=21%  Similarity=0.370  Sum_probs=24.0

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.++|||+ |+||++++++|. +|++|..+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~   30 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLA   30 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEE
Confidence            367899998 689999999996 78887654

>KOG1431|consensus

Probab=95.67  E-value=0.012  Score=43.36  Aligned_cols=25  Identities=28%  Similarity=0.508  Sum_probs=23.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      ++|+|||++|++|+.|.+.+..+++
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~   26 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGF   26 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCC
Confidence            5799999999999999999998876

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=95.62  E-value=0.016  Score=43.61  Aligned_cols=31  Identities=29%  Similarity=0.270  Sum_probs=25.4

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..+|.|.|||||+|..+++.|.+++|.+..+
T Consensus         7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l   37 (344)
T PLN02383          7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSL   37 (344)
T ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCCcceE
Confidence            3579999999999999999999876654433

>KOG1205|consensus

Probab=95.58  E-value=0.024  Score=41.94  Aligned_cols=35  Identities=26%  Similarity=0.359  Sum_probs=30.4

Q ss_pred             hhhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          48 EFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        48 ~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..+.++.|+||||+.=||.+++..|.+.|..+..+
T Consensus         8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lv   42 (282)
T KOG1205|consen    8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLV   42 (282)
T ss_pred             HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEe
Confidence            44678999999999999999999999999875544

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=95.49  E-value=0.014  Score=43.68  Aligned_cols=29  Identities=31%  Similarity=0.313  Sum_probs=24.4

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +|.|.|||||+|..+++.|.++++.+..+
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l   29 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKL   29 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhE
Confidence            47899999999999999999877765443

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=95.47  E-value=0.022  Score=42.38  Aligned_cols=24  Identities=25%  Similarity=0.346  Sum_probs=21.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcC
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCC   76 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g   76 (84)
                      .+|+||||+|++|++++..|+..+
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~   26 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGD   26 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCc
Confidence            469999999999999999998853

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05599 hypothetical protein; Provisional

Probab=95.31  E-value=0.027  Score=39.16  Aligned_cols=29  Identities=14%  Similarity=0.176  Sum_probs=24.8

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |.++||||++-||..++++|. +|++|..+
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~   29 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLA   29 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEE
Confidence            468999999999999999998 58877554

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=95.22  E-value=0.025  Score=42.37  Aligned_cols=29  Identities=34%  Similarity=0.512  Sum_probs=23.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|.|.|||||+|..+++.|.++ +.+..+
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~h-P~~el~   29 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNH-PEVEIT   29 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcC-CCceEE
Confidence            46899999999999999999876 444433

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=95.08  E-value=0.031  Score=42.66  Aligned_cols=25  Identities=24%  Similarity=0.542  Sum_probs=22.7

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHc
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRC   75 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~   75 (84)
                      ..++|.|.|||||+|..+++.|.++
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~h   61 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANH   61 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhC
Confidence            4468999999999999999999887

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=95.08  E-value=0.035  Score=40.88  Aligned_cols=32  Identities=19%  Similarity=0.332  Sum_probs=29.1

Q ss_pred             hccceEEEecc--CcchHHHHHHHHHHcCCceEE
Q psy8179          50 YKDQTVFITGA--TGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        50 ~~~~~vlitGa--tGfiG~~l~~~ll~~g~~V~~   81 (84)
                      +++|.++||||  +.=||..+++.|.+.|.+|..
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~   40 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV   40 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE
Confidence            67899999999  799999999999999998754

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=94.96  E-value=0.034  Score=41.89  Aligned_cols=30  Identities=27%  Similarity=0.265  Sum_probs=24.3

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQML   80 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~   80 (84)
                      +..+|.|.|||||+|..+++.|.++.+.+.
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~   32 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPVG   32 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCce
Confidence            446799999999999999999998544443

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=94.95  E-value=0.025  Score=41.82  Aligned_cols=29  Identities=31%  Similarity=0.395  Sum_probs=23.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+++|||++|.+|+.|.+.|. .+++|..+
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~   29 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIAT   29 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEec
Confidence            359999999999999999998 44666543

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=94.90  E-value=0.036  Score=41.30  Aligned_cols=29  Identities=28%  Similarity=0.386  Sum_probs=23.0

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcC-CceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCC-PQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g-~~V~~   81 (84)
                      ++|.|+|++||+|+++++.|.++. .++..
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~   30 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAK   30 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEE
Confidence            368999999999999999888763 24443

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=94.74  E-value=0.042  Score=41.16  Aligned_cols=29  Identities=31%  Similarity=0.405  Sum_probs=25.7

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +|.|.|++||.|..+++.|..+ +++..++
T Consensus         3 ~v~IvGasGy~G~el~rlL~~H-P~~el~~   31 (310)
T TIGR01851         3 KVFIDGEAGTTGLQIRERLSGR-DDIELLS   31 (310)
T ss_pred             eEEEECCCChhHHHHHHHHhCC-CCeEEEE
Confidence            6899999999999999999998 8887655

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>PLN00015 protochlorophyllide reductase

Probab=94.69  E-value=0.036  Score=39.97  Aligned_cols=27  Identities=26%  Similarity=0.222  Sum_probs=23.9

Q ss_pred             EEeccCcchHHHHHHHHHHcC-CceEEE
Q psy8179          56 FITGATGFLGSLLVEKLLRCC-PQMLSL   82 (84)
Q Consensus        56 litGatGfiG~~l~~~ll~~g-~~V~~I   82 (84)
                      +||||++-||..++++|+++| ++|..+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~   28 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMA   28 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEE
Confidence            589999999999999999999 877543

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=94.58  E-value=0.063  Score=37.32  Aligned_cols=29  Identities=21%  Similarity=0.303  Sum_probs=25.9

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      |+|.|.||+|.+|+.+...|.+.|++|..
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v   29 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIII   29 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEE
Confidence            46899999999999999999999988753

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=94.55  E-value=0.052  Score=40.58  Aligned_cols=30  Identities=30%  Similarity=0.411  Sum_probs=25.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+|.|.|||||+|..+++.|.++ +++..++
T Consensus         3 ~~VaIvGAtGy~G~eLlrlL~~h-p~~~l~~   32 (313)
T PRK11863          3 PKVFIDGEAGTTGLQIRERLAGR-SDIELLS   32 (313)
T ss_pred             cEEEEECCCCHHHHHHHHHHhcC-CCeEEEE
Confidence            46899999999999999988887 6776554

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=94.43  E-value=0.05  Score=40.63  Aligned_cols=23  Identities=39%  Similarity=0.531  Sum_probs=21.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC   75 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~   75 (84)
                      ++|.|.||||++|+.+++.|.++
T Consensus         3 ~kVaIiGAtG~vG~~l~~~L~~~   25 (343)
T PRK00436          3 IKVGIVGASGYTGGELLRLLLNH   25 (343)
T ss_pred             eEEEEECCCCHHHHHHHHHHHcC
Confidence            57999999999999999999875

>KOG0725|consensus

Probab=94.27  E-value=0.088  Score=38.21  Aligned_cols=33  Identities=12%  Similarity=0.255  Sum_probs=30.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.++.++|||++.=||+.++.+|.+.|.+|...
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~   38 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVIT   38 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            568899999999999999999999999988764

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=94.19  E-value=0.07  Score=40.90  Aligned_cols=34  Identities=21%  Similarity=0.325  Sum_probs=30.1

Q ss_pred             hccceEEEecc----------------CcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGA----------------TGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGa----------------tGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.+++++||||                ||.+|..+++.+...|++|..++
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~  232 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLIT  232 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeC
Confidence            56799999987                57899999999999999998764

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=93.88  E-value=0.11  Score=35.97  Aligned_cols=24  Identities=21%  Similarity=0.360  Sum_probs=19.8

Q ss_pred             cCcchHHHHHHHHHHcCCceEEEE
Q psy8179          60 ATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        60 atGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +||-.|..+++.+...|++|+.|+
T Consensus        27 SSG~~G~~lA~~~~~~Ga~V~li~   50 (185)
T PF04127_consen   27 SSGKMGAALAEEAARRGAEVTLIH   50 (185)
T ss_dssp             --SHHHHHHHHHHHHTT-EEEEEE
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEe
Confidence            789999999999999999999886

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.87  E-value=0.1  Score=38.26  Aligned_cols=32  Identities=19%  Similarity=0.225  Sum_probs=28.7

Q ss_pred             hccceEEEeccC--cchHHHHHHHHHHcCCceEE
Q psy8179          50 YKDQTVFITGAT--GFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        50 ~~~~~vlitGat--GfiG~~l~~~ll~~g~~V~~   81 (84)
                      +.+|.++|||++  .-||+.+++.|.++|++|..
T Consensus         6 ~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv   39 (299)
T PRK06300          6 LTGKIAFIAGIGDDQGYGWGIAKALAEAGATILV   39 (299)
T ss_pred             CCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEE
Confidence            567899999995  89999999999999999865

>KOG2865|consensus

Probab=93.71  E-value=0.086  Score=40.10  Aligned_cols=32  Identities=34%  Similarity=0.500  Sum_probs=25.9

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++-..-|-|||||+|+.++.+|.+.|.+|..=
T Consensus        60 sGiVaTVFGAtGFlGryvvnklak~GSQviiP   91 (391)
T KOG2865|consen   60 SGIVATVFGATGFLGRYVVNKLAKMGSQVIIP   91 (391)
T ss_pred             cceEEEEecccccccHHHHHHHhhcCCeEEEe
Confidence            34445566999999999999999999887653

>KOG1372|consensus

Probab=93.67  E-value=0.1  Score=39.14  Aligned_cols=32  Identities=34%  Similarity=0.349  Sum_probs=29.4

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+..+|||-||-=||.+.+.|+.+||+|+.|+
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGii   59 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGII   59 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEE
Confidence            45689999999999999999999999999875

>KOG4039|consensus

Probab=93.49  E-value=0.086  Score=37.68  Aligned_cols=32  Identities=28%  Similarity=0.485  Sum_probs=27.1

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ..+..+|.||||..|+.+++++.+. +...+||
T Consensus        17 q~~s~fvlGAtG~~G~~llk~~~E~-~~FSKV~   48 (238)
T KOG4039|consen   17 QNMSGFVLGATGLCGGGLLKHAQEA-PQFSKVY   48 (238)
T ss_pred             hccceEEEeccccccHHHHHHHHhc-ccceeEE
Confidence            4678999999999999999999997 5555555

>KOG1201|consensus

Probab=93.37  E-value=0.16  Score=38.02  Aligned_cols=34  Identities=21%  Similarity=0.310  Sum_probs=29.3

Q ss_pred             hhhhccceEEEeccCcchHHHHHHHHHHcCCceE
Q psy8179          47 QEFYKDQTVFITGATGFLGSLLVEKLLRCCPQML   80 (84)
Q Consensus        47 ~~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~   80 (84)
                      .....++.|+||||++=+|+.++.++++.|..+.
T Consensus        33 ~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~v   66 (300)
T KOG1201|consen   33 LKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLV   66 (300)
T ss_pred             hhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEE
Confidence            3456788999999999999999999999987553

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=93.33  E-value=0.13  Score=38.84  Aligned_cols=32  Identities=22%  Similarity=0.263  Sum_probs=28.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++|+|+++ +|..+++.|++.|++|..+
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~   34 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILT   34 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEE
Confidence            4578999999999 9999999999999998765

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.17  E-value=0.17  Score=37.27  Aligned_cols=34  Identities=15%  Similarity=0.257  Sum_probs=30.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.+++++|.|++|++|+.+...|++.|..|...|
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~  190 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICH  190 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEe
Confidence            4679999999999999999999999988777655

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=93.10  E-value=0.11  Score=39.40  Aligned_cols=28  Identities=29%  Similarity=0.367  Sum_probs=23.0

Q ss_pred             ceEEEeccCcchHHHHHHHHHH-cCCceE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLR-CCPQML   80 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~-~g~~V~   80 (84)
                      .+|.|.|||||+|+.+++.|.+ ...+|.
T Consensus         6 ~~VaIvGATG~vG~ell~lL~~h~~f~v~   34 (347)
T PRK06728          6 YHVAVVGATGAVGQKIIELLEKETKFNIA   34 (347)
T ss_pred             CEEEEEeCCCHHHHHHHHHHHHCCCCCcc
Confidence            5799999999999999999985 444543

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=92.94  E-value=0.17  Score=38.26  Aligned_cols=31  Identities=32%  Similarity=0.350  Sum_probs=27.5

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++|.|.||.|.+|+.+...|.+.|++|..+
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~  128 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRIL  128 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCCCeEEEe
Confidence            3679999999999999999999999887653

>KOG1208|consensus

Probab=92.73  E-value=0.17  Score=37.74  Aligned_cols=32  Identities=19%  Similarity=0.205  Sum_probs=28.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      ..++.++|||++.=||..+++.|..+|.+|..
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~   64 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGAHVVL   64 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCCEEEE
Confidence            45689999999999999999999999977653

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=92.64  E-value=0.16  Score=35.95  Aligned_cols=25  Identities=24%  Similarity=0.446  Sum_probs=22.3

Q ss_pred             ccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          59 GATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        59 GatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .++|.+|+++++.|.+.|++|..++
T Consensus        22 ~SSGgIG~AIA~~la~~Ga~Vvlv~   46 (227)
T TIGR02114        22 HSTGHLGKIITETFLSAGHEVTLVT   46 (227)
T ss_pred             CcccHHHHHHHHHHHHCCCEEEEEc
Confidence            5799999999999999999997653

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=92.57  E-value=0.2  Score=38.28  Aligned_cols=28  Identities=32%  Similarity=0.392  Sum_probs=24.9

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      .+|.|.||+||-|..|++.|..+ ++|..
T Consensus         3 ~kV~IvGasGYtG~EL~rlL~~H-p~ve~   30 (349)
T COG0002           3 IKVGIVGASGYTGLELLRLLAGH-PDVEL   30 (349)
T ss_pred             ceEEEEcCCCCcHHHHHHHHhcC-CCeEE
Confidence            57999999999999999999987 77763

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=92.45  E-value=0.24  Score=36.52  Aligned_cols=26  Identities=31%  Similarity=0.211  Sum_probs=23.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCc
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQ   78 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~   78 (84)
                      ++|.|.|++|++|++++..++..|+.
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~   26 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVV   26 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCC
Confidence            47899999999999999999998754

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK06849 hypothetical protein; Provisional

Probab=92.28  E-value=0.24  Score=36.96  Aligned_cols=32  Identities=22%  Similarity=0.186  Sum_probs=28.8

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.++|+|||++..+|-++++.|.+.|++|..+
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~   34 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILA   34 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            35789999999999999999999999988765

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.12  E-value=0.32  Score=36.09  Aligned_cols=34  Identities=15%  Similarity=0.274  Sum_probs=31.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.+++++|.|+++.+|+-+...|.+.|..|...|
T Consensus       156 l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~  189 (286)
T PRK14175        156 LEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILH  189 (286)
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEe
Confidence            4679999999999999999999999999888765

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=91.87  E-value=0.28  Score=35.65  Aligned_cols=31  Identities=23%  Similarity=0.395  Sum_probs=27.2

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      .+-+|+||||+.=||..++++|.+.|-+|..
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi   34 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVII   34 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEE
Confidence            4568999999999999999999999877753

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=91.73  E-value=0.29  Score=36.90  Aligned_cols=29  Identities=28%  Similarity=0.370  Sum_probs=25.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|+|+|+ |.+|+++++.|.+.|++|..|
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vi   29 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVI   29 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEE
Confidence            46889987 999999999999999988755

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=91.55  E-value=0.42  Score=32.09  Aligned_cols=24  Identities=38%  Similarity=0.364  Sum_probs=21.6

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCC
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      +++||||+|-+|..+++.|.+++.
T Consensus         2 tylitGG~gglg~~la~~La~~~~   25 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGA   25 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCC
Confidence            589999999999999999999863

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=91.50  E-value=0.27  Score=37.33  Aligned_cols=31  Identities=32%  Similarity=0.328  Sum_probs=26.0

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ++|-|.||||.+|+.+++.|.+..+.+..++
T Consensus         2 ~~VavvGATG~VG~~~~~~L~e~~f~~~~~~   32 (334)
T COG0136           2 LNVAVLGATGAVGQVLLELLEERHFPFEELV   32 (334)
T ss_pred             cEEEEEeccchHHHHHHHHHHhcCCCcceEE
Confidence            4688999999999999999999667765443

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=91.45  E-value=0.4  Score=32.68  Aligned_cols=33  Identities=18%  Similarity=0.278  Sum_probs=28.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++|.|+.+++|.-+++.|.++|.+|..+
T Consensus        42 l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~   74 (168)
T cd01080          42 LAGKKVVVVGRSNIVGKPLAALLLNRNATVTVC   74 (168)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEE
Confidence            577999999998899999999999998776543

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>KOG1200|consensus

Probab=91.38  E-value=0.42  Score=34.66  Aligned_cols=40  Identities=10%  Similarity=0.171  Sum_probs=33.3

Q ss_pred             hhhhhhccceEEEeccCcchHHHHHHHHHHcCCceEEEEC
Q psy8179          45 PIQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLRF   84 (84)
Q Consensus        45 ~~~~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~~   84 (84)
                      ...+....+.+.+|||+.=||+.+.+.|.++|++|...++
T Consensus         7 ~~~~r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl   46 (256)
T KOG1200|consen    7 EVVQRLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADL   46 (256)
T ss_pred             HHHHHHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeec
Confidence            3444556788999999999999999999999999877653

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=91.38  E-value=0.44  Score=32.45  Aligned_cols=34  Identities=18%  Similarity=0.257  Sum_probs=27.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.+++++|.|.+..+|+-+...|.+++..|...|
T Consensus        34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h   67 (160)
T PF02882_consen   34 LEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICH   67 (160)
T ss_dssp             TTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-
T ss_pred             CCCCEEEEECCcCCCChHHHHHHHhCCCeEEecc
Confidence            5789999999999999999999999999888765

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=91.37  E-value=0.32  Score=36.74  Aligned_cols=32  Identities=16%  Similarity=0.243  Sum_probs=27.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++|+|++| +|...++.|.+.|++|...
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~   34 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVN   34 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEE
Confidence            3567899999999 9999999999999988653

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=91.28  E-value=0.38  Score=30.21  Aligned_cols=29  Identities=34%  Similarity=0.500  Sum_probs=23.6

Q ss_pred             eEEEeccCcchHHHHHHHHHHc-CCceEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRC-CPQMLSL   82 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~-g~~V~~I   82 (84)
                      ++.+.|++|++|+.+++.+... +.++..+
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av   30 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVAL   30 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEE
Confidence            3779999999999999999884 5566554

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=91.26  E-value=0.2  Score=38.36  Aligned_cols=23  Identities=26%  Similarity=0.525  Sum_probs=19.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC   75 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~   75 (84)
                      ++|.|.|||||+|+.+++.++++
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~   24 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEE   24 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhC
Confidence            46889999999999999966664

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=91.25  E-value=0.34  Score=35.33  Aligned_cols=29  Identities=21%  Similarity=0.289  Sum_probs=25.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|.|.| +|++|+.+...|.++|++|..+
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~   31 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLW   31 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEE
Confidence            4688888 9999999999999999988653

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=91.14  E-value=0.43  Score=33.22  Aligned_cols=32  Identities=19%  Similarity=0.346  Sum_probs=28.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++|+|.|| |-+|...++.|++.|++|+.|
T Consensus         8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VI   39 (202)
T PRK06718          8 LSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVI   39 (202)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEE
Confidence            56789999998 899999999999999888765

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.09  E-value=0.39  Score=35.90  Aligned_cols=34  Identities=12%  Similarity=0.271  Sum_probs=30.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.++.|.+.|.+|.+|+-+...|+++|+.|...|
T Consensus       157 l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~  190 (301)
T PRK14194        157 LTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVH  190 (301)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEC
Confidence            4689999999999999999999999999987654

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.93  E-value=0.42  Score=35.54  Aligned_cols=34  Identities=12%  Similarity=0.244  Sum_probs=30.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.+++|.|.|.++.+|.-++..|++.|+.|...|
T Consensus       156 ~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~  189 (296)
T PRK14188        156 LSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAH  189 (296)
T ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEEC
Confidence            4689999999999999999999999999987653

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=90.86  E-value=0.33  Score=31.88  Aligned_cols=24  Identities=38%  Similarity=0.350  Sum_probs=21.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcC
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCC   76 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g   76 (84)
                      ++|.|.|++|.+|++++..|...+
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~   24 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQG   24 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCC
Confidence            468999999999999999999875

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=90.84  E-value=0.26  Score=37.72  Aligned_cols=30  Identities=20%  Similarity=0.327  Sum_probs=23.7

Q ss_pred             ceEEEeccCcchHHHHHHHHH-HcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLL-RCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll-~~g~~V~~I   82 (84)
                      ++|.|.||||.+|+.+++.|. +....+..+
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~   31 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRP   31 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCccccE
Confidence            368899999999999999998 555554443

>PRK08655 prephenate dehydrogenase; Provisional

Probab=90.81  E-value=0.4  Score=37.05  Aligned_cols=29  Identities=24%  Similarity=0.252  Sum_probs=25.7

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      |+|.|.||+|.+|+.++..|.+.|++|..
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v   29 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIV   29 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEE
Confidence            46899999999999999999999987754

>KOG4169|consensus

Probab=90.63  E-value=0.36  Score=35.47  Aligned_cols=33  Identities=21%  Similarity=0.340  Sum_probs=29.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++.+++||+.|=||..+.++|+++|..+..|
T Consensus         3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i   35 (261)
T KOG4169|consen    3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVI   35 (261)
T ss_pred             ccCceEEEecCCchhhHHHHHHHHHcCchheee
Confidence            568999999999999999999999998766544

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=90.60  E-value=0.54  Score=31.08  Aligned_cols=22  Identities=23%  Similarity=0.413  Sum_probs=19.0

Q ss_pred             EEEeccCcchHHHHHHHHHHcC
Q psy8179          55 VFITGATGFLGSLLVEKLLRCC   76 (84)
Q Consensus        55 vlitGatGfiG~~l~~~ll~~g   76 (84)
                      |.|.|+||.||++.++-+.+..
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~   22 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHP   22 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCT
T ss_pred             CEEEcCCcHHHHHHHHHHHhCC
Confidence            5788999999999998887764

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=90.27  E-value=0.54  Score=30.10  Aligned_cols=30  Identities=27%  Similarity=0.366  Sum_probs=24.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHH-cCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLR-CCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~-~g~~V~~I   82 (84)
                      ++|.|.|++|-.|+.+++.+.+ .+.++..+
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~   31 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGA   31 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEE
Confidence            4799999999999999999999 55554443

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase

Probab=90.00  E-value=0.73  Score=36.34  Aligned_cols=25  Identities=16%  Similarity=0.337  Sum_probs=21.3

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHc
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRC   75 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~   75 (84)
                      ..++|.|.|+||.||.+.++-+.++
T Consensus        56 ~~KkI~ILGSTGSIGtqtLdVI~~~   80 (454)
T PLN02696         56 GPKPISLLGSTGSIGTQTLDIVAEN   80 (454)
T ss_pred             CccEEEEecCCcHhhHHHHHHHHhC
Confidence            3478999999999999999877764

>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional

Probab=89.97  E-value=0.34  Score=36.61  Aligned_cols=30  Identities=20%  Similarity=0.118  Sum_probs=25.8

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+|.| ||||-+|+.+++.|.+++..+..++
T Consensus         4 ~~iAi-GATg~VG~~~l~~Leer~fpv~~l~   33 (322)
T PRK06901          4 LNIAI-AAEFELSEKLLEALEQSDLEIEQIS   33 (322)
T ss_pred             ceEEE-ecCcHHHHHHHHHHHhcCCchhhee
Confidence            46889 9999999999999999888777555

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=89.81  E-value=0.64  Score=32.19  Aligned_cols=30  Identities=30%  Similarity=0.464  Sum_probs=26.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQML   80 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~   80 (84)
                      +.++++.|.|. |-+|+++++.|.+.|++|.
T Consensus        26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vv   55 (200)
T cd01075          26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLI   55 (200)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEE
Confidence            56789999998 5799999999999999886

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=89.55  E-value=0.67  Score=34.38  Aligned_cols=34  Identities=12%  Similarity=0.245  Sum_probs=30.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.+++++|.|.++.+|+-+...|.+++..|...|
T Consensus       156 l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~h  189 (285)
T PRK14189        156 LRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICH  189 (285)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEec
Confidence            3679999999999999999999999998887665

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=89.50  E-value=0.73  Score=32.44  Aligned_cols=31  Identities=26%  Similarity=0.357  Sum_probs=26.9

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      .+.+++|+|++|.+|..+++.+...|.+|..
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~  192 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIA  192 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEE
Confidence            3568999999999999999999999887644

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd00704 MDH Malate dehydrogenase

Probab=89.22  E-value=0.41  Score=35.68  Aligned_cols=23  Identities=35%  Similarity=0.377  Sum_probs=20.6

Q ss_pred             eEEEeccCcchHHHHHHHHHHcC
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCC   76 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g   76 (84)
                      +|.|+||+|.+|++++..|...+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~   24 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGE   24 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCC
Confidence            68999999999999999888754

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=89.17  E-value=0.57  Score=36.20  Aligned_cols=27  Identities=26%  Similarity=0.444  Sum_probs=23.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcC-CceE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCC-PQML   80 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g-~~V~   80 (84)
                      ++|+|.|+ |+||+.++..|.+++ .+|.
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~   29 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVT   29 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEE
Confidence            56888888 999999999999987 5654

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=89.11  E-value=0.63  Score=34.50  Aligned_cols=33  Identities=12%  Similarity=0.235  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.++.+.+.|.+|.+|.-+...|+++|+.|...
T Consensus       156 l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~  188 (284)
T PRK14179        156 LEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLT  188 (284)
T ss_pred             CCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEE
Confidence            467999999999999999999999999988764

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=89.08  E-value=0.72  Score=31.39  Aligned_cols=28  Identities=21%  Similarity=0.281  Sum_probs=23.4

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +|.|.|+ |..|+.++..++..|++|..+
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~   28 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLY   28 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEE
Confidence            3667777 999999999999999998754

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=89.05  E-value=0.87  Score=30.24  Aligned_cols=34  Identities=24%  Similarity=0.341  Sum_probs=31.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.++++.|.|.+.-+|..+...|.++|..|...+
T Consensus        26 ~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~   59 (140)
T cd05212          26 LDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCD   59 (140)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeC
Confidence            5789999999999999999999999999887765

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=88.87  E-value=0.65  Score=33.21  Aligned_cols=28  Identities=21%  Similarity=0.308  Sum_probs=25.0

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      ++...||+|-+|+.+..+|...||+|..
T Consensus         2 ~~~~i~GtGniG~alA~~~a~ag~eV~i   29 (211)
T COG2085           2 MIIAIIGTGNIGSALALRLAKAGHEVII   29 (211)
T ss_pred             cEEEEeccChHHHHHHHHHHhCCCeEEE
Confidence            4667799999999999999999999865

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=88.71  E-value=0.9  Score=33.73  Aligned_cols=34  Identities=24%  Similarity=0.323  Sum_probs=30.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.+++++|.|.+..+|+-+...|+++|..|...|
T Consensus       155 l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~h  188 (285)
T PRK14191        155 IKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCH  188 (285)
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEe
Confidence            3679999999999999999999999999988765

>PRK06444 prephenate dehydrogenase; Provisional

Probab=88.40  E-value=0.75  Score=32.17  Aligned_cols=28  Identities=25%  Similarity=0.234  Sum_probs=25.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQML   80 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~   80 (84)
                      +++.|.||+|=.|+.+.+.|.+.|+.|.
T Consensus         1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~   28 (197)
T PRK06444          1 MMEIIIGKNGRLGRVLCSILDDNGLGVY   28 (197)
T ss_pred             CEEEEEecCCcHHHHHHHHHHhCCCEEE
Confidence            4689999999999999999999999874

>KOG1207|consensus

Probab=88.40  E-value=0.73  Score=33.00  Aligned_cols=34  Identities=24%  Similarity=0.330  Sum_probs=30.4

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++.++.|++||+.--||+.++..|.+.|.+|..+
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAv   37 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAV   37 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEE
Confidence            4568899999999999999999999999988765

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=88.17  E-value=0.86  Score=33.92  Aligned_cols=25  Identities=28%  Similarity=0.141  Sum_probs=21.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      ++|.|.|++|.+|++++..|...+.
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~   25 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPL   25 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC
Confidence            4689999999999999999887753

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05086 malate dehydrogenase; Provisional

Probab=88.11  E-value=0.71  Score=34.14  Aligned_cols=22  Identities=32%  Similarity=0.339  Sum_probs=19.5

Q ss_pred             ceEEEeccCcchHHHHHHHHHH
Q psy8179          53 QTVFITGATGFLGSLLVEKLLR   74 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~   74 (84)
                      +++.|.||+|.+|++++..+..
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~   22 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKT   22 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHc
Confidence            4789999999999999988855

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=87.95  E-value=1.1  Score=33.37  Aligned_cols=34  Identities=15%  Similarity=0.242  Sum_probs=30.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.+++++|.|.+..+|+-+...|.+++..|...|
T Consensus       162 l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~h  195 (287)
T PRK14176        162 IEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCH  195 (287)
T ss_pred             CCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEe
Confidence            3679999999999999999999999998888766

>KOG1014|consensus

Probab=87.73  E-value=0.85  Score=34.40  Aligned_cols=30  Identities=20%  Similarity=0.237  Sum_probs=27.0

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .-.+|||||.=||+..++.|.++|.+|..|
T Consensus        50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLI   79 (312)
T KOG1014|consen   50 SWAVVTGATDGIGKAYARELAKRGFNVVLI   79 (312)
T ss_pred             CEEEEECCCCcchHHHHHHHHHcCCEEEEE
Confidence            568999999999999999999999997654

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=87.66  E-value=0.98  Score=35.09  Aligned_cols=31  Identities=16%  Similarity=0.253  Sum_probs=26.8

Q ss_pred             cceEEEeccCcchHHH--HHHHHHHcCCceEEEE
Q psy8179          52 DQTVFITGATGFLGSL--LVEKLLRCCPQMLSLR   83 (84)
Q Consensus        52 ~~~vlitGatGfiG~~--l~~~ll~~g~~V~~I~   83 (84)
                      +|+++|||+++-+|..  +++.| +.|.+|..++
T Consensus        41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~   73 (398)
T PRK13656         41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVF   73 (398)
T ss_pred             CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEe
Confidence            4889999999999999  89999 9998876653

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=87.61  E-value=1.2  Score=33.01  Aligned_cols=34  Identities=15%  Similarity=0.158  Sum_probs=30.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.+++++|.|.+..+|+-+...|++++..|...|
T Consensus       157 l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~h  190 (285)
T PRK10792        157 TYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCH  190 (285)
T ss_pred             CCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEE
Confidence            3579999999999999999999999998888765

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=87.36  E-value=1.1  Score=33.15  Aligned_cols=34  Identities=15%  Similarity=0.251  Sum_probs=30.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.++.++|.|.+..+|+-+...|.+++..|...|
T Consensus       156 l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~ch  189 (282)
T PRK14180        156 TEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCH  189 (282)
T ss_pred             CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEc
Confidence            4689999999999999999999999998887765

>PLN00106 malate dehydrogenase

Probab=87.23  E-value=0.79  Score=34.31  Aligned_cols=24  Identities=25%  Similarity=0.153  Sum_probs=21.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcC
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCC   76 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g   76 (84)
                      .+|.|+|++|.||+.+...|...+
T Consensus        19 ~KV~IiGaaG~VG~~~a~~l~~~~   42 (323)
T PLN00106         19 FKVAVLGAAGGIGQPLSLLMKMNP   42 (323)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC
Confidence            579999999999999999998654

>KOG4022|consensus

Probab=87.15  E-value=1.2  Score=31.62  Aligned_cols=31  Identities=32%  Similarity=0.323  Sum_probs=28.0

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+|+|-|+-|-+|+.++++|..++|.|..|-
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siD   34 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSID   34 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEe
Confidence            5799999999999999999999999887663

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=86.80  E-value=1.3  Score=31.68  Aligned_cols=29  Identities=24%  Similarity=0.397  Sum_probs=22.9

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc-CCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC-CPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~-g~~V~~   81 (84)
                      ++|.|.|++|.+|+.+++.+.+. +.++..
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elva   31 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVA   31 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEE
Confidence            57999999999999999888764 344444

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=86.73  E-value=1.4  Score=32.60  Aligned_cols=34  Identities=15%  Similarity=0.215  Sum_probs=30.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.+++++|.|.+..+|+-+...|++++..|...|
T Consensus       156 l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~ch  189 (284)
T PRK14190        156 ISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCH  189 (284)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEe
Confidence            4689999999999999999999999988887765

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=86.64  E-value=1.2  Score=33.20  Aligned_cols=34  Identities=15%  Similarity=0.191  Sum_probs=30.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.++.++|.|.+..+|+-+...|.+++..|...|
T Consensus       156 l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~h  189 (297)
T PRK14186        156 IAGKKAVVVGRSILVGKPLALMLLAANATVTIAH  189 (297)
T ss_pred             CCCCEEEEECCCccchHHHHHHHHHCCCEEEEeC
Confidence            4679999999999999999999999998887765

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=86.46  E-value=1.4  Score=32.06  Aligned_cols=30  Identities=13%  Similarity=0.102  Sum_probs=25.3

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCc-eEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQ-MLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~-V~~   81 (84)
                      ++++++|+|+ |=+|+.++..|...|.+ |..
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I  155 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITI  155 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEE
Confidence            4678999999 78999999999999876 543

>KOG1611|consensus

Probab=86.46  E-value=1  Score=32.94  Aligned_cols=31  Identities=35%  Similarity=0.433  Sum_probs=25.6

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+.++||||..=||-.++++|++. ..+..|+
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~-~~i~~ii   33 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKD-KGIEVII   33 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcC-CCcEEEE
Confidence            356999999999999999999975 5666554

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=86.40  E-value=0.85  Score=28.18  Aligned_cols=32  Identities=19%  Similarity=0.327  Sum_probs=26.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++++|+|.|+ |=+|.+=++.|++.|.+|+.|
T Consensus         5 l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vi   36 (103)
T PF13241_consen    5 LKGKRVLVVGG-GPVAARKARLLLEAGAKVTVI   36 (103)
T ss_dssp             -TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEE
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEE
Confidence            46789999998 889999999999999887765

>KOG1209|consensus

Probab=86.35  E-value=1.1  Score=32.99  Aligned_cols=30  Identities=27%  Similarity=0.400  Sum_probs=25.6

Q ss_pred             cceEEEec-cCcchHHHHHHHHHHcCCceEE
Q psy8179          52 DQTVFITG-ATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        52 ~~~vlitG-atGfiG~~l~~~ll~~g~~V~~   81 (84)
                      .+.|+||| +.|=||..+.+.|.++|+.|..
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~A   37 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYA   37 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEE
Confidence            36688887 7899999999999999998753

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=86.33  E-value=1.4  Score=32.59  Aligned_cols=30  Identities=23%  Similarity=0.355  Sum_probs=26.0

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      +.+|+|+||+|-+|+..++.+...|+.+..
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~  172 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVA  172 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEE
Confidence            678999999999999999999988865543

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=86.22  E-value=1.4  Score=30.18  Aligned_cols=29  Identities=17%  Similarity=0.319  Sum_probs=22.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|.|. |.||+|-.++..|.+.|++|..+
T Consensus         1 M~I~Vi-GlGyvGl~~A~~lA~~G~~V~g~   29 (185)
T PF03721_consen    1 MKIAVI-GLGYVGLPLAAALAEKGHQVIGV   29 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE
T ss_pred             CEEEEE-CCCcchHHHHHHHHhCCCEEEEE
Confidence            345555 79999999999999999999765

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=86.08  E-value=0.87  Score=33.94  Aligned_cols=24  Identities=29%  Similarity=0.349  Sum_probs=21.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcC
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCC   76 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g   76 (84)
                      .+|.|+|++|.+|++++..|+..+
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~   26 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGE   26 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcc
Confidence            579999999999999999988754

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=86.04  E-value=1.7  Score=30.04  Aligned_cols=31  Identities=26%  Similarity=0.375  Sum_probs=26.0

Q ss_pred             hhhhccceEEEeccCcchHHHHHHHHHHcCCc
Q psy8179          47 QEFYKDQTVFITGATGFLGSLLVEKLLRCCPQ   78 (84)
Q Consensus        47 ~~~~~~~~vlitGatGfiG~~l~~~ll~~g~~   78 (84)
                      ....+..+|+|.|..| +|+++++.|...|..
T Consensus        14 q~~L~~s~VlviG~gg-lGsevak~L~~~GVg   44 (198)
T cd01485          14 QNKLRSAKVLIIGAGA-LGAEIAKNLVLAGID   44 (198)
T ss_pred             HHHHhhCcEEEECCCH-HHHHHHHHHHHcCCC
Confidence            3445668899999999 999999999998854

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=86.02  E-value=1.4  Score=32.73  Aligned_cols=34  Identities=21%  Similarity=0.288  Sum_probs=30.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.++.++|.|.+..+|+-+...|++++..|...|
T Consensus       153 l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtich  186 (287)
T PRK14173        153 LAGKEVVVVGRSNIVGKPLAALLLREDATVTLAH  186 (287)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeC
Confidence            3579999999999999999999999988887665

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=85.88  E-value=1.5  Score=31.60  Aligned_cols=31  Identities=26%  Similarity=0.330  Sum_probs=26.2

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      .+.+|+|+|++|-+|..+++.+...|.+|..
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~  181 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVG  181 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEE
Confidence            3578999999999999999888888877643

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=85.74  E-value=1.5  Score=32.50  Aligned_cols=34  Identities=15%  Similarity=0.257  Sum_probs=30.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.+++++|.|.+..+|+-+...|.+++..|...|
T Consensus       156 l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~ch  189 (278)
T PRK14172        156 IEGKEVVVIGRSNIVGKPVAQLLLNENATVTICH  189 (278)
T ss_pred             CCCCEEEEECCCccchHHHHHHHHHCCCEEEEeC
Confidence            3689999999999999999999999988887665

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=85.39  E-value=1.8  Score=29.88  Aligned_cols=30  Identities=17%  Similarity=0.358  Sum_probs=25.2

Q ss_pred             hhhccceEEEeccCcchHHHHHHHHHHcCCc
Q psy8179          48 EFYKDQTVFITGATGFLGSLLVEKLLRCCPQ   78 (84)
Q Consensus        48 ~~~~~~~vlitGatGfiG~~l~~~ll~~g~~   78 (84)
                      .....++|+|.|+.| +|+++++.|...|..
T Consensus        17 ~~L~~s~VlIiG~gg-lG~evak~La~~GVg   46 (197)
T cd01492          17 KRLRSARILLIGLKG-LGAEIAKNLVLSGIG   46 (197)
T ss_pred             HHHHhCcEEEEcCCH-HHHHHHHHHHHcCCC
Confidence            445678899999888 999999999998854

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PTZ00325 malate dehydrogenase; Provisional

Probab=85.37  E-value=1.3  Score=33.06  Aligned_cols=26  Identities=31%  Similarity=0.201  Sum_probs=21.9

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcC
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCC   76 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g   76 (84)
                      +..+|.|+|++|.||+.+...|...+
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~   32 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNP   32 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCC
Confidence            34579999999999999999888654

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=85.35  E-value=2.3  Score=27.23  Aligned_cols=30  Identities=23%  Similarity=0.289  Sum_probs=24.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcC-CceE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCC-PQML   80 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g-~~V~   80 (84)
                      .+.++++|+|+ |.+|+.+++.|.+.+ ++|.
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~   47 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIV   47 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEE
Confidence            34678999997 899999999999885 4444

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=85.34  E-value=0.93  Score=33.77  Aligned_cols=21  Identities=33%  Similarity=0.528  Sum_probs=17.3

Q ss_pred             EEEeccCcchHHHHHHHHHHcC
Q psy8179          55 VFITGATGFLGSLLVEKLLRCC   76 (84)
Q Consensus        55 vlitGatGfiG~~l~~~ll~~g   76 (84)
                      |+|.|+ |++|+.+++.|.++.
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~   21 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRG   21 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTT
T ss_pred             CEEEcC-cHHHHHHHHHHhcCC
Confidence            688999 999999999999984

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=85.15  E-value=1.5  Score=32.66  Aligned_cols=34  Identities=12%  Similarity=0.191  Sum_probs=30.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.++.++|.|.+..+|+-+...|++++..|...|
T Consensus       158 l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~ch  191 (294)
T PRK14187        158 LSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVH  191 (294)
T ss_pred             CCCCEEEEECCCccchHHHHHHHhhCCCEEEEeC
Confidence            4689999999999999999999999998888765

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=85.14  E-value=1.6  Score=32.43  Aligned_cols=34  Identities=12%  Similarity=0.226  Sum_probs=30.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.+++++|.|.+..+|+-+...|.+++..|...|
T Consensus       155 l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtich  188 (284)
T PRK14170        155 IEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAH  188 (284)
T ss_pred             CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeC
Confidence            4689999999999999999999999988887765

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=85.02  E-value=1.6  Score=32.30  Aligned_cols=34  Identities=18%  Similarity=0.299  Sum_probs=30.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.+++++|.|.+..+|+-+...|++++..|+..|
T Consensus       155 l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~ch  188 (282)
T PRK14166        155 LEGKDAVIIGASNIVGRPMATMLLNAGATVSVCH  188 (282)
T ss_pred             CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeC
Confidence            4679999999999999999999999988887665

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=84.94  E-value=1.8  Score=28.91  Aligned_cols=32  Identities=16%  Similarity=0.167  Sum_probs=26.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++++|+|.|| |=+|...++.|++.|++|+.|
T Consensus        11 l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VI   42 (157)
T PRK06719         11 LHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVV   42 (157)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEE
Confidence            46788888874 778999999999999998765

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=84.92  E-value=1.6  Score=32.32  Aligned_cols=34  Identities=21%  Similarity=0.301  Sum_probs=30.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.+++++|.|.+..+|+-+...|++++..|...|
T Consensus       155 l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~h  188 (281)
T PRK14183        155 VKGKDVCVVGASNIVGKPMAALLLNANATVDICH  188 (281)
T ss_pred             CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeC
Confidence            4689999999999999999999999988887654

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=84.86  E-value=1.7  Score=30.85  Aligned_cols=29  Identities=24%  Similarity=0.353  Sum_probs=24.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|.|.|+ |-+|+.+...|.+.|++|..+
T Consensus         1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~   29 (304)
T PRK06522          1 MKIAILGA-GAIGGLFGAALAQAGHDVTLV   29 (304)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEE
Confidence            35788886 999999999999999988654

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=84.67  E-value=1.7  Score=32.26  Aligned_cols=34  Identities=12%  Similarity=0.164  Sum_probs=30.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.++.++|.|.+..+|+-+...|++++..|...|
T Consensus       157 l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~ch  190 (284)
T PRK14177        157 VTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCH  190 (284)
T ss_pred             CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeC
Confidence            4679999999999999999999999988887765

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=84.55  E-value=1.8  Score=32.09  Aligned_cols=34  Identities=15%  Similarity=0.217  Sum_probs=30.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.++.++|.|.+..+|+-+...|++++..|...|
T Consensus       154 l~Gk~vvViGrS~iVGkPla~lL~~~~atVtich  187 (282)
T PRK14169        154 VAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAH  187 (282)
T ss_pred             CCCCEEEEECCCccchHHHHHHHHHCCCEEEEEC
Confidence            4679999999999999999999999988887655

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=84.51  E-value=1.9  Score=30.80  Aligned_cols=31  Identities=19%  Similarity=0.238  Sum_probs=25.9

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      .+.+|+|.|++|-+|...++.+...|.+|..
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~  168 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVG  168 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEE
Confidence            3578999999999999999888888876543

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=84.39  E-value=1.9  Score=32.42  Aligned_cols=30  Identities=37%  Similarity=0.525  Sum_probs=25.1

Q ss_pred             hhhhccceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          47 QEFYKDQTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        47 ~~~~~~~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      ...+...+|+|.|+ |.+|+.++..|...|.
T Consensus        19 Q~~L~~~~VlVvG~-GglGs~va~~La~aGv   48 (339)
T PRK07688         19 QQKLREKHVLIIGA-GALGTANAEMLVRAGV   48 (339)
T ss_pred             HHHhcCCcEEEECC-CHHHHHHHHHHHHcCC
Confidence            34456778999987 8899999999999886

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=84.35  E-value=1.8  Score=32.60  Aligned_cols=30  Identities=23%  Similarity=0.278  Sum_probs=26.0

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++++|.|+ |.+|+.+++.|.+.|++|..|
T Consensus       231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vi  260 (453)
T PRK09496        231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLI  260 (453)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEE
Confidence            467999998 999999999999988888654

>COG0743 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid metabolism]

Probab=84.27  E-value=1.8  Score=33.56  Aligned_cols=26  Identities=23%  Similarity=0.385  Sum_probs=22.5

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCc
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQ   78 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~   78 (84)
                      +++.|.|+||.||.+.+.-+.+++.+
T Consensus         2 k~i~iLGSTGSIG~qtLdVi~~~p~~   27 (385)
T COG0743           2 KKLTILGSTGSIGTQTLDVIRRNPDK   27 (385)
T ss_pred             ceEEEEecCCchhHHHHHHHHhCCCc
Confidence            57899999999999999988887555

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=84.18  E-value=2.1  Score=32.81  Aligned_cols=32  Identities=19%  Similarity=0.342  Sum_probs=26.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++|+|.|+ |.+|..++..|.+.|++|..+
T Consensus        14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~   45 (480)
T PRK01438         14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVV   45 (480)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEE
Confidence            45678999986 789999999999999988654

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=84.17  E-value=0.99  Score=33.66  Aligned_cols=23  Identities=35%  Similarity=0.505  Sum_probs=20.2

Q ss_pred             eEEEeccCcchHHHHHHHHHHcC
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCC   76 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g   76 (84)
                      +|.|+|++|.+|++++..|...+
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~   23 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGR   23 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhcc
Confidence            48899999999999999988743

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=84.15  E-value=2.1  Score=30.30  Aligned_cols=31  Identities=26%  Similarity=0.327  Sum_probs=26.0

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      .+.+++|.||+|-+|..+++.+...|.+|..
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~  173 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIG  173 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEE
Confidence            4578999999999999998888888877643

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=84.14  E-value=1.9  Score=30.98  Aligned_cols=29  Identities=17%  Similarity=0.225  Sum_probs=24.5

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|.|.|+ |.+|+.++..|.+.|++|..+
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~   30 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLV   30 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEE
Confidence            35777777 999999999999999998753

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=83.79  E-value=1.3  Score=33.07  Aligned_cols=24  Identities=29%  Similarity=0.349  Sum_probs=21.5

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcC
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCC   76 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g   76 (84)
                      .+|.|.|++|++|++++..|+..+
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~   27 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGE   27 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCC
Confidence            469999999999999999998775

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK12409 D-amino acid dehydrogenase small subunit; Provisional

Probab=83.78  E-value=1.9  Score=32.02  Aligned_cols=28  Identities=18%  Similarity=0.210  Sum_probs=23.2

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .|+|.| .|++|..++.+|.+.|.+|..+
T Consensus         3 ~vvIIG-aG~~G~~~A~~La~~g~~V~vl   30 (410)
T PRK12409          3 HIAVIG-AGITGVTTAYALAQRGYQVTVF   30 (410)
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCeEEEE
Confidence            466666 5999999999999999888654

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=83.75  E-value=1.1  Score=29.33  Aligned_cols=31  Identities=26%  Similarity=0.379  Sum_probs=26.6

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .++|-|.|+ |=+|.++.+.|.+.|+.|..||
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~   40 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVY   40 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEES
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEE
Confidence            467888887 9999999999999999998886

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK05442 malate dehydrogenase; Provisional

Probab=83.71  E-value=1.3  Score=33.16  Aligned_cols=25  Identities=28%  Similarity=0.323  Sum_probs=21.5

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcC
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCC   76 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g   76 (84)
                      ..+|.|+|++|.+|++++..|...+
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~   28 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGD   28 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhh
Confidence            4579999999999999999888754

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=83.64  E-value=2  Score=27.27  Aligned_cols=31  Identities=16%  Similarity=0.351  Sum_probs=23.3

Q ss_pred             ceEEEeccC---cchHHHHHHHHHHcCCceEEEE
Q psy8179          53 QTVFITGAT---GFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        53 ~~vlitGat---GfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++.|.|++   +-.|..+++.|.+.|++|..|+
T Consensus         1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vn   34 (116)
T PF13380_consen    1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVN   34 (116)
T ss_dssp             -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEES
T ss_pred             CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEEC
Confidence            468899987   7789999999999998887764

>KOG1496|consensus

Probab=83.63  E-value=0.87  Score=34.03  Aligned_cols=22  Identities=36%  Similarity=0.578  Sum_probs=19.9

Q ss_pred             ceEEEeccCcchHHHHHHHHHH
Q psy8179          53 QTVFITGATGFLGSLLVEKLLR   74 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~   74 (84)
                      -+|+||||+|-||.+++..+.+
T Consensus         5 irVlVtGAAGqI~ysll~~ia~   26 (332)
T KOG1496|consen    5 IRVLVTGAAGQIGYSLLPMIAR   26 (332)
T ss_pred             eEEEeecccchhhHHHHHHHcC
Confidence            4799999999999999998865

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=83.46  E-value=2  Score=31.96  Aligned_cols=34  Identities=21%  Similarity=0.254  Sum_probs=30.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.++.++|.|.+..+|+-+...|++++..|...|
T Consensus       157 l~GK~vvViGrS~iVGkPla~lL~~~~ATVtich  190 (288)
T PRK14171        157 LTGKNVVIIGRSNIVGKPLSALLLKENCSVTICH  190 (288)
T ss_pred             CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeC
Confidence            4679999999999999999999999988887655

>PRK00711 D-amino acid dehydrogenase small subunit; Validated

Probab=83.44  E-value=2  Score=31.83  Aligned_cols=28  Identities=18%  Similarity=0.284  Sum_probs=22.9

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .|+|.|| |++|..++..|.+.|.+|..+
T Consensus         2 ~v~IVG~-Gi~Gls~A~~l~~~g~~V~vl   29 (416)
T PRK00711          2 RVVVLGS-GVIGVTSAWYLAQAGHEVTVI   29 (416)
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCEEEEE
Confidence            4667664 999999999999999887654

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=83.43  E-value=2.2  Score=33.80  Aligned_cols=35  Identities=14%  Similarity=0.167  Sum_probs=30.8

Q ss_pred             hhccceEEEec----------------cCcchHHHHHHHHHHcCCceEEEE
Q psy8179          49 FYKDQTVFITG----------------ATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        49 ~~~~~~vlitG----------------atGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+.+++|+||+                .||-.|..|++.+...|.+|..|+
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~  303 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLIS  303 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEe
Confidence            36788999996                678999999999999999998875

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=83.36  E-value=2.2  Score=30.72  Aligned_cols=31  Identities=23%  Similarity=0.300  Sum_probs=25.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcC-CceEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCC-PQMLS   81 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g-~~V~~   81 (84)
                      ..+++++|+|+ |-+|+.++..|...| .+|..
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v  152 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITI  152 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEE
Confidence            45678999997 999999999999988 45543

>cd05295 MDH_like Malate dehydrogenase-like

Probab=83.26  E-value=0.97  Score=35.57  Aligned_cols=23  Identities=30%  Similarity=0.224  Sum_probs=20.8

Q ss_pred             cceEEEeccCcchHHHHHHHHHH
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLR   74 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~   74 (84)
                      ..+|+||||+|.||.+++..+.+
T Consensus       123 p~~V~vtgAag~i~Y~l~~~ia~  145 (452)
T cd05295         123 PLQVCITNASAPLCYHLIPSLAS  145 (452)
T ss_pred             ceEEEEecCcHHHHHHHHHHHhC
Confidence            35799999999999999999876

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=82.81  E-value=4.5  Score=26.05  Aligned_cols=29  Identities=21%  Similarity=0.212  Sum_probs=25.1

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCc
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQ   78 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~   78 (84)
                      .+++++++|.|+ |-.|+.++..|...|.+
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~   37 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAK   37 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSS
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCC
Confidence            467899999998 55899999999999876

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=82.64  E-value=2.4  Score=31.74  Aligned_cols=34  Identities=15%  Similarity=0.259  Sum_probs=30.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.+++++|.|.+..+|+-+...|.+++..|...|
T Consensus       165 l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvch  198 (299)
T PLN02516        165 IKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVH  198 (299)
T ss_pred             CCCCEEEEECCCccchHHHHHHHHHCCCEEEEeC
Confidence            4679999999999999999999999999888765

>cd08293 PTGR2 Prostaglandin reductase

Probab=82.17  E-value=2.7  Score=30.12  Aligned_cols=29  Identities=28%  Similarity=0.251  Sum_probs=24.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCC-ceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCP-QMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~-~V~~   81 (84)
                      .+|+|.||+|-+|...++.+...|. +|..
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~  185 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVG  185 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEE
Confidence            6899999999999999988887887 5544

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=82.14  E-value=2.6  Score=31.29  Aligned_cols=34  Identities=15%  Similarity=0.241  Sum_probs=30.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.++.++|.|.+..+|+-+...|.+++..|...|
T Consensus       155 l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtich  188 (282)
T PRK14182        155 PKGKRALVVGRSNIVGKPMAMMLLERHATVTIAH  188 (282)
T ss_pred             CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeC
Confidence            3689999999999999999999999988887665

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=82.13  E-value=4.4  Score=24.01  Aligned_cols=28  Identities=29%  Similarity=0.332  Sum_probs=23.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCc
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQ   78 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~   78 (84)
                      +.+++++|.|+ |-.|+.++..+.+.+..
T Consensus        21 ~~~~~v~i~G~-G~~g~~~a~~l~~~~~~   48 (86)
T cd05191          21 LKGKTVVVLGA-GEVGKGIAKLLADEGGK   48 (86)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCC
Confidence            45678999999 99999999999998533

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]

Probab=82.08  E-value=2.3  Score=31.66  Aligned_cols=34  Identities=18%  Similarity=0.309  Sum_probs=30.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+++++.|.|.+-++|+-+...|+..++.|..-|
T Consensus       154 l~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcH  187 (283)
T COG0190         154 LRGKNVVVVGRSNIVGKPLALLLLNANATVTVCH  187 (283)
T ss_pred             CCCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEc
Confidence            3679999999999999999999999999988765

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=81.93  E-value=2.1  Score=40.04  Aligned_cols=31  Identities=13%  Similarity=0.125  Sum_probs=26.5

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHc-CCceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRC-CPQMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~-g~~V~~   81 (84)
                      .++.++||||++-||..++++|.++ |.+|..
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL 2027 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFIL 2027 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEE
Confidence            5689999999999999999999987 466543

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=81.82  E-value=3.1  Score=28.59  Aligned_cols=31  Identities=16%  Similarity=0.281  Sum_probs=26.4

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      .+.+++|+|++|-+|..+.+.+...|.+|..
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~  169 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIA  169 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEE
Confidence            3578999999999999999999988877643

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Probab=81.82  E-value=2  Score=33.30  Aligned_cols=30  Identities=23%  Similarity=0.388  Sum_probs=22.1

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc--CCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC--CPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~--g~~V~~I   82 (84)
                      +++.|.|+||.||.+.+.-+.+.  .++|..+
T Consensus         2 k~i~IlGsTGSIG~qtL~Vi~~~~~~f~v~~L   33 (389)
T TIGR00243         2 KQIVILGSTGSIGKSTLDVVRHNPDHFQVVAL   33 (389)
T ss_pred             ceEEEEecChHHHHHHHHHHHhCccccEEEEE
Confidence            57999999999999988765543  2455443

1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis.

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=81.81  E-value=2.6  Score=31.28  Aligned_cols=34  Identities=15%  Similarity=0.054  Sum_probs=29.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHH--cCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLR--CCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~--~g~~V~~I~   83 (84)
                      +.++.++|.|.+..+|+-+...|++  ++..|...|
T Consensus       156 l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvch  191 (284)
T PRK14193        156 LAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCH  191 (284)
T ss_pred             CCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeC
Confidence            3579999999999999999999998  677777655

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=81.72  E-value=2.3  Score=31.70  Aligned_cols=24  Identities=29%  Similarity=0.148  Sum_probs=20.7

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCC
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      +|.|.|++|.+|++++..|...+.
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~   24 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPY   24 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCC
Confidence            378999999999999999887754

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]

Probab=81.63  E-value=2.7  Score=30.54  Aligned_cols=29  Identities=24%  Similarity=0.241  Sum_probs=25.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.|+|.| .|++|...+.+|.+.|++|..+
T Consensus         5 ~~vvVIG-gGi~Gls~A~~La~~G~~V~vi   33 (387)
T COG0665           5 MDVVIIG-GGIVGLSAAYYLAERGADVTVL   33 (387)
T ss_pred             ceEEEEC-CcHHHHHHHHHHHHcCCEEEEE
Confidence            5688888 9999999999999999877654

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=81.63  E-value=3.2  Score=28.01  Aligned_cols=30  Identities=23%  Similarity=0.370  Sum_probs=24.9

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      .+.+++|+|+++ +|..+++.+...|.+|..
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~  163 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIV  163 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEE
Confidence            457899999999 999999888888876643

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=81.53  E-value=3.3  Score=31.09  Aligned_cols=31  Identities=32%  Similarity=0.428  Sum_probs=25.6

Q ss_pred             hhhhccceEEEeccCcchHHHHHHHHHHcCCc
Q psy8179          47 QEFYKDQTVFITGATGFLGSLLVEKLLRCCPQ   78 (84)
Q Consensus        47 ~~~~~~~~vlitGatGfiG~~l~~~ll~~g~~   78 (84)
                      ...++.++|+|.|+.| +|+++++.|...|..
T Consensus        19 Q~~L~~~~VlIiG~Gg-lGs~va~~La~aGvg   49 (338)
T PRK12475         19 QRKIREKHVLIVGAGA-LGAANAEALVRAGIG   49 (338)
T ss_pred             HHhhcCCcEEEECCCH-HHHHHHHHHHHcCCC
Confidence            4446678899999766 999999999999863

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=81.48  E-value=2.9  Score=29.85  Aligned_cols=29  Identities=17%  Similarity=0.241  Sum_probs=24.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|.|.|+ |++|..++..++..|++|..+
T Consensus         4 ~kI~VIG~-G~mG~~ia~~la~~g~~V~~~   32 (282)
T PRK05808          4 QKIGVIGA-GTMGNGIAQVCAVAGYDVVMV   32 (282)
T ss_pred             cEEEEEcc-CHHHHHHHHHHHHCCCceEEE
Confidence            35777765 999999999999999988754

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=81.40  E-value=2.9  Score=30.66  Aligned_cols=31  Identities=23%  Similarity=0.327  Sum_probs=25.9

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      .+.+|+|.|++|-+|...++.+...|.+|..
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~  188 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVG  188 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEE
Confidence            3578999999999999999888888876543

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=81.40  E-value=3.4  Score=29.28  Aligned_cols=34  Identities=18%  Similarity=0.168  Sum_probs=30.8

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+++++|.|.+..+|+-+...|++++..|...
T Consensus        59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~   92 (197)
T cd01079          59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSV   92 (197)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEE
Confidence            3678999999999999999999999999888766

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1

Probab=81.36  E-value=2.9  Score=29.65  Aligned_cols=32  Identities=22%  Similarity=0.273  Sum_probs=27.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++|.|.| .|-+|+++++.|.+.|.+|..|
T Consensus        29 l~~~~v~I~G-~G~VG~~~a~~L~~~g~~vv~v   60 (227)
T cd01076          29 LAGARVAIQG-FGNVGSHAARFLHEAGAKVVAV   60 (227)
T ss_pred             ccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEE
Confidence            4678888887 7999999999999998887654

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=81.20  E-value=2.6  Score=30.22  Aligned_cols=28  Identities=21%  Similarity=0.273  Sum_probs=23.4

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +|.|.| .|.+|..+...|.+.|++|..+
T Consensus         2 ~I~IIG-~G~mG~sla~~L~~~g~~V~~~   29 (279)
T PRK07417          2 KIGIVG-LGLIGGSLGLDLRSLGHTVYGV   29 (279)
T ss_pred             eEEEEe-ecHHHHHHHHHHHHCCCEEEEE
Confidence            577776 8999999999999998887644

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=80.96  E-value=1.8  Score=33.40  Aligned_cols=25  Identities=40%  Similarity=0.571  Sum_probs=22.4

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCc
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQ   78 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~   78 (84)
                      .++|-||+||.|.-++++|...|.+
T Consensus         8 d~iiYGAtGy~G~lvae~l~~~g~~   32 (382)
T COG3268           8 DIIIYGATGYAGGLVAEYLAREGLT   32 (382)
T ss_pred             eEEEEccccchhHHHHHHHHHcCCc
Confidence            4789999999999999999998754

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=80.93  E-value=3.1  Score=29.72  Aligned_cols=30  Identities=27%  Similarity=0.311  Sum_probs=25.0

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      .+++++|+|+ |-+|+.++..|...|++|..
T Consensus       116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v  145 (270)
T TIGR00507       116 PNQRVLIIGA-GGAARAVALPLLKADCNVII  145 (270)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEE
Confidence            3578999998 78999999999998876543

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=80.80  E-value=2.3  Score=32.86  Aligned_cols=30  Identities=23%  Similarity=0.414  Sum_probs=22.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc--CCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC--CPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~--g~~V~~I   82 (84)
                      ++|.|.|+||.||.+.+.-+.+.  .++|..+
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaL   33 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVAL   33 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEE
Confidence            57999999999999988877654  2444443

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=80.78  E-value=3.5  Score=28.42  Aligned_cols=31  Identities=19%  Similarity=0.373  Sum_probs=26.3

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      .+++++|+|++|-+|..+++.+...|.+|..
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~  174 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIA  174 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEE
Confidence            4678999999999999999988888877543

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=80.17  E-value=3.6  Score=28.48  Aligned_cols=31  Identities=16%  Similarity=0.237  Sum_probs=26.5

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      .+.+++|+|++|-+|..+++.+...|.+|..
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~  174 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIA  174 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEE
Confidence            3568999999999999999999888877654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=80.01  E-value=2  Score=33.10  Aligned_cols=25  Identities=24%  Similarity=0.305  Sum_probs=22.3

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcC
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCC   76 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g   76 (84)
                      ..+|.|+|++|.+|++++..|...+
T Consensus        44 p~KV~IIGAaG~VG~~~A~~l~~~~   68 (387)
T TIGR01757        44 TVNVAVSGAAGMISNHLLFMLASGE   68 (387)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcc
Confidence            4679999999999999999998765

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	84
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	1e-10
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	2e-06
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	2e-06
1xq6_A	253	Unknown protein; structural genomics, protein stru	4e-06
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	6e-06
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	6e-06
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	6e-06
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	3e-05
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	3e-05
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	3e-05
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	4e-05
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	5e-05
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	6e-05
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	8e-05
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	9e-05
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	1e-04
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	1e-04
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	1e-04
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	1e-04
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	2e-04
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	2e-04
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	2e-04
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	2e-04
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	2e-04
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	2e-04
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	3e-04
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	3e-04
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	4e-04
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	4e-04
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	4e-04
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	7e-04
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	8e-04

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 54.5 bits (131), Expect = 1e-10
 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 3/51 (5%)

Query: 27 LDKEDDAEDIIWDDDTPSPIQEFYKDQTVFITGATGFLGSLLVEKLLRCCP 77
          LD+  DA+ +    + P P  E    +TV +TGATGFLG  LV +LLR   
Sbjct: 51 LDRFIDADTLATAVNLPGPSPE---LRTVLLTGATGFLGRYLVLELLRRLD 98

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 42.7 bits (101), Expect = 2e-06
 Identities = 7/31 (22%), Positives = 10/31 (32%)

Query: 44 SPIQEFYKDQTVFITGATGFLGSLLVEKLLR 74
           P+          + GATG LG      +  
Sbjct: 5  QPLSRPGAHVKYAVLGATGLLGHHAARAIRA 35

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 42.5 bits (100), Expect = 2e-06
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 47 QEFYKDQTVFITGATGFLGSLLVEKLLR 74
            F++ + VF+TG TGF G  L   L  
Sbjct: 4  NSFWQGKRVFVTGHTGFKGGWLSLWLQT 31

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 41.8 bits (98), Expect = 4e-06
 Identities = 9/21 (42%), Positives = 14/21 (66%)

Query: 53 QTVFITGATGFLGSLLVEKLL 73
           TV +TGA+G  G ++ +KL 
Sbjct: 5  PTVLVTGASGRTGQIVYKKLK 25

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 41.1 bits (96), Expect = 6e-06
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          + I GATG  GS ++E+   
Sbjct: 3  IGIIGATGRAGSRILEEAKN 22

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 41.2 bits (96), Expect = 6e-06
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          + + GATG  GS +V +  R
Sbjct: 3  IAVLGATGRAGSAIVAEARR 22

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 41.2 bits (97), Expect = 6e-06
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 51 KDQTVFITGATGFLGSLLVEKLLR 74
          K + + + GA+GF+GS L+ + L 
Sbjct: 3  KVKKIVLIGASGFVGSALLNEALN 26

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 39.2 bits (92), Expect = 3e-05
 Identities = 11/23 (47%), Positives = 16/23 (69%)

Query: 51 KDQTVFITGATGFLGSLLVEKLL 73
          +   V +TGA GF+ S +VE+LL
Sbjct: 10 EGSLVLVTGANGFVASHVVEQLL 32

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 39.2 bits (92), Expect = 3e-05
 Identities = 13/23 (56%), Positives = 19/23 (82%)

Query: 51 KDQTVFITGATGFLGSLLVEKLL 73
          + +TV +TGA+GF+GS LV +LL
Sbjct: 4  QSETVCVTGASGFIGSWLVMRLL 26

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 39.2 bits (92), Expect = 3e-05
 Identities = 11/21 (52%), Positives = 15/21 (71%)

Query: 53 QTVFITGATGFLGSLLVEKLL 73
          +T  + G TGF+ SLLV+ LL
Sbjct: 10 KTACVVGGTGFVASLLVKLLL 30

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 38.8 bits (91), Expect = 4e-05
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          +FI G+TG +G  L++ L  
Sbjct: 3  IFIVGSTGRVGKSLLKSLST 22

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 38.6 bits (89), Expect = 5e-05
 Identities = 8/21 (38%), Positives = 10/21 (47%)

Query: 54 TVFITGATGFLGSLLVEKLLR 74
             I G TG +G+ L E L  
Sbjct: 3  VALIVGVTGIIGNSLAEILPL 23

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 38.1 bits (89), Expect = 6e-05
 Identities = 6/20 (30%), Positives = 10/20 (50%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          V + GA G +   L+ +L  
Sbjct: 24 VLVVGANGKVARYLLSELKN 43

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 38.1 bits (89), Expect = 8e-05
 Identities = 7/21 (33%), Positives = 13/21 (61%)

Query: 54 TVFITGATGFLGSLLVEKLLR 74
           + I GA G +G  L ++L++
Sbjct: 16 HIAIIGAAGMVGRKLTQRLVK 36

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 37.7 bits (88), Expect = 9e-05
 Identities = 6/21 (28%), Positives = 11/21 (52%)

Query: 54 TVFITGATGFLGSLLVEKLLR 74
           + I GATG  G   + + ++
Sbjct: 5  KIAIFGATGQTGLTTLAQAVQ 25

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 8/22 (36%), Positives = 14/22 (63%)

Query: 53 QTVFITGATGFLGSLLVEKLLR 74
          + V + GATG  G  L++++L 
Sbjct: 6  KRVLLAGATGLTGEHLLDRILS 27

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 7/22 (31%), Positives = 11/22 (50%)

Query: 53 QTVFITGATGFLGSLLVEKLLR 74
            + +TGA G +GS +   L  
Sbjct: 3  NRLLVTGAAGGVGSAIRPHLGT 24

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 8/26 (30%), Positives = 14/26 (53%)

Query: 53 QTVFITGATGFLGSLLVEKLLRCCPQ 78
          + + +TGA G LG ++ E+L      
Sbjct: 4  KRLLVTGAAGQLGRVMRERLAPMAEI 29

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 37.6 bits (88), Expect = 1e-04
 Identities = 11/20 (55%), Positives = 15/20 (75%)

Query: 54 TVFITGATGFLGSLLVEKLL 73
           V +TG TGFLGS +++ LL
Sbjct: 3  RVCVTGGTGFLGSWIIKSLL 22

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 37.3 bits (87), Expect = 2e-04
 Identities = 7/21 (33%), Positives = 13/21 (61%)

Query: 54 TVFITGATGFLGSLLVEKLLR 74
           + +TGATG LG+ +  + + 
Sbjct: 2  NIMLTGATGHLGTHITNQAIA 22

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 37.1 bits (86), Expect = 2e-04
 Identities = 6/21 (28%), Positives = 11/21 (52%)

Query: 53 QTVFITGATGFLGSLLVEKLL 73
          + V I GA G +   ++ +L 
Sbjct: 24 KNVLILGAGGQIARHVINQLA 44

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 36.9 bits (85), Expect = 2e-04
 Identities = 7/21 (33%), Positives = 9/21 (42%)

Query: 54 TVFITGATGFLGSLLVEKLLR 74
           + I GA G +   L   LL 
Sbjct: 7  YITILGAAGQIAQXLTATLLT 27

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 37.3 bits (87), Expect = 2e-04
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 51 KDQTVFITGATGFLGSLLVEKLLR 74
          ++  + ITGA GF+ S +  +L  
Sbjct: 28 ENLKISITGAGGFIASHIARRLKH 51

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score = 37.1 bits (86), Expect = 2e-04
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query: 41 DTPSPIQEFYKDQTVFITGATGFLGSLLVEKLLR 74
          +  +      K + V I G  GF+G  L +++L 
Sbjct: 13 EAQTQGPGSMKAKKVLILGVNGFIGHHLSKRILE 46

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 36.9 bits (86), Expect = 2e-04
 Identities = 10/21 (47%), Positives = 17/21 (80%)

Query: 54 TVFITGATGFLGSLLVEKLLR 74
          ++ +TGATG LG L+++ LL+
Sbjct: 2  SIAVTGATGQLGGLVIQHLLK 22

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 36.3 bits (84), Expect = 3e-04
 Identities = 9/24 (37%), Positives = 19/24 (79%)

Query: 51 KDQTVFITGATGFLGSLLVEKLLR 74
          ++++VFI GA+G  G +L++++L 
Sbjct: 17 QNKSVFILGASGETGRVLLKEILE 40

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 36.5 bits (85), Expect = 3e-04
 Identities = 7/20 (35%), Positives = 13/20 (65%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          + +TG++G +G+ LV  L  
Sbjct: 2  ILVTGSSGQIGTELVPYLAE 21

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 36.1 bits (84), Expect = 4e-04
 Identities = 13/24 (54%), Positives = 17/24 (70%)

Query: 51 KDQTVFITGATGFLGSLLVEKLLR 74
            +T  ITG  GF+GS L+EKLL+
Sbjct: 24 SPKTWLITGVAGFIGSNLLEKLLK 47

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 36.2 bits (84), Expect = 4e-04
 Identities = 9/21 (42%), Positives = 12/21 (57%)

Query: 54  TVFITGATGFLGSLLVEKLLR 74
           TV ITG+ G +G  L  +L  
Sbjct: 149 TVAITGSRGLVGRALTAQLQT 169

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 36.1 bits (84), Expect = 4e-04
 Identities = 11/24 (45%), Positives = 16/24 (66%)

Query: 51 KDQTVFITGATGFLGSLLVEKLLR 74
          + +   ITG  GF+GS L+E LL+
Sbjct: 26 QPKVWLITGVAGFIGSNLLETLLK 49

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score = 35.5 bits (82), Expect = 7e-04
 Identities = 11/20 (55%), Positives = 14/20 (70%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          V I G  GF+G+ L E+LLR
Sbjct: 3  VLILGVNGFIGNHLTERLLR 22

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 35.3 bits (82), Expect = 8e-04
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 46 IQEFYKDQTVFITGATGFLGSLLVEKLL 73
           Q    +QT+ ITG TG  G   V K+L
Sbjct: 15 HQNMLDNQTILITGGTGSFGKCFVRKVL 42

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	84
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	98.8
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	98.55
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	98.51
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	98.5
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	98.49
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	98.48
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	98.48
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	98.47
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	98.46
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	98.44
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	98.43
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	98.42
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	98.42
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	98.41
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	98.4
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	98.4
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	98.4
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	98.39
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	98.39
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	98.38
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	98.37
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	98.35
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	98.35
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	98.34
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	98.33
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	98.33
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	98.33
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	98.33
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	98.33
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	98.32
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	98.32
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	98.31
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	98.31
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	98.3
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	98.29
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	98.28
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	98.28
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	98.28
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	98.27
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	98.26
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	98.26
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	98.25
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	98.25
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	98.24
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	98.24
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	98.24
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	98.23
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	98.23
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	98.22
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	98.22
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	98.22
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	98.22
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	98.21
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	98.2
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	98.2
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	98.19
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	98.19
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	98.18
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	98.18
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	98.17
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	98.16
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	98.16
1xq6_A	253	Unknown protein; structural genomics, protein stru	98.16
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	98.15
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	98.15
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	98.15
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	98.14
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	98.13
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	98.13
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	98.13
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	98.13
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	98.12
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	98.12
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	98.11
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	98.11
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	98.11
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	98.09
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	98.08
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	98.08
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	98.08
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	98.08
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	98.07
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	98.06
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	98.05
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	98.04
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	98.04
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	98.03
4f6c_A	427	AUSA reductase domain protein; thioester reductase	98.03
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	98.02
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	98.02
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	98.02
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	98.02
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	98.01
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	98.01
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	98.01
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	98.01
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	98.01
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	98.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.99
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.99
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	97.99
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	97.98
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	97.98
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.98
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.98
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.97
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	97.97
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.97
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	97.96
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	97.96
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	97.96
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	97.95
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.95
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.95
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.95
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.95
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.95
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	97.95
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.94
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	97.94
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	97.93
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	97.93
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.93
1xq1_A	266	Putative tropinone reducatse; structural genomics,	97.93
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.93
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.93
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.92
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	97.92
4f6l_B	508	AUSA reductase domain protein; thioester reductase	97.92
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	97.91
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	97.91
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	97.91
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	97.91
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	97.91
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.91
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.9
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.9
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.9
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.9
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	97.89
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	97.89
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	97.88
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.88
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.88
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.88
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.88
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	97.88
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	97.88
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.87
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.87
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	97.87
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	97.87
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	97.87
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.87
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.87
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	97.87
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.86
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.86
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.86
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.86
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	97.86
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.86
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.86
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.85
1spx_A	278	Short-chain reductase family member (5L265); paral	97.85
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.84
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.84
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.84
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.84
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	97.83
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.83
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.83
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.83
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.83
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	97.83
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.83
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.83
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	97.82
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	97.82
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	97.82
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.82
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.82
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	97.82
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	97.81
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	97.81
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.81
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.81
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	97.81
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	97.81
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	97.8
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.8
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	97.8
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.8
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	97.8
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	97.8
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	97.79
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.79
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.79
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	97.79
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	97.79
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.79
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.79
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.78
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.78
1xkq_A	280	Short-chain reductase family member (5D234); parra	97.78
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.78
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.78
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.78
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	97.78
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.78
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.78
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.77
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.77
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.77
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	97.77
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	97.77
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.77
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.77
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.76
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	97.76
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	97.76
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.76
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.76
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	97.76
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.75
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.75
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.75
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.75
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.75
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	97.74
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.74
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.74
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	97.74
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.74
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.74
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	97.73
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.73
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.72
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	97.72
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.72
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.72
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.71
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.71
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.71
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.7
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	97.7
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	97.7
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.69
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.68
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.68
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	97.68
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	97.67
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.67
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	97.67
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.66
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	97.66
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.66
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	97.66
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	97.65
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.65
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	97.65
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.64
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.64
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.64
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.63
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	97.62
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.61
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	97.61
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.6
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.6
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	97.59
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	97.59
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	97.59
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.58
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.56
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	97.56
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	97.55
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	97.54
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.52
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	97.47
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.45
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	97.4
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	97.39
4e4y_A	244	Short chain dehydrogenase family protein; structur	97.36
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	97.32
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.31
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	97.29
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	97.24
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	97.24
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	97.17
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	97.08
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.06
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	97.03
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	97.01
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	97.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	96.95
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	96.94
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.92
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.92
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	96.91
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.86
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	96.83
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	96.76
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	96.74
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.74
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	96.69
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	96.67
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	96.55
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	96.55
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.53
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	96.53
1id1_A	153	Putative potassium channel protein; RCK domain, E.	96.51
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	96.49
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	96.49
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.36
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	96.33
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	96.01
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	95.85
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	95.85
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	95.69
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	95.62
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	95.51
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	95.36
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	95.33
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	95.24
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	95.22
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	95.19
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	95.13
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	95.12
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	94.96
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	94.95
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	94.92
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	94.85
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	94.84
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	94.84
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	94.83
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	94.82
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	94.8
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	94.64
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	94.64
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	94.64
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	94.57
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	94.57
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	94.55
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	94.48
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	94.42
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	94.4
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	94.32
1vkn_A	351	N-acetyl-gamma-glutamyl-phosphate reductase; TM178	94.32
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	94.25
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	94.2
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	94.16
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	93.78
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	93.78
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	93.76
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	93.5
3c85_A	183	Putative glutathione-regulated potassium-efflux S	93.5
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	93.36
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	93.33
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	93.05
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	93.02
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	92.94
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	92.89
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	92.86
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	92.5
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	92.49
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	92.37
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	92.34
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	92.24
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	92.24
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	91.91
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	91.86
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	91.8
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	91.69
4eye_A	342	Probable oxidoreductase; structural genomics, niai	91.61
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	91.39
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	91.36
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	91.16
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	91.16
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	91.14
1iuk_A	140	Hypothetical protein TT1466; structural genomics,	91.13
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	91.09
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	91.03
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	90.96
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	90.92
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	90.91
3l07_A	285	Bifunctional protein fold; structural genomics, ID	90.72
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	90.67
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	90.47
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	90.32
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	90.21
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	90.0
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	89.8
4g65_A	461	TRK system potassium uptake protein TRKA; structur	89.78
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	89.77
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	89.61
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	89.59
2duw_A	145	Putative COA-binding protein; ligand binding prote	89.43
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	89.43
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	89.43
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	89.36
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	89.1
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	89.1
1hdg_O	332	Holo-D-glyceraldehyde-3-phosphate dehydrogenase; o	88.97
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	88.92
3gms_A	340	Putative NADPH:quinone reductase; structural genom	88.84
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	88.68
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	88.54
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	88.53
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	88.47
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	88.03
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	87.71
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	87.69
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	87.61
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	87.5
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	87.49
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	87.49
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	87.29
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	87.23
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	87.17
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	87.13
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	87.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	86.86
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	86.84
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	86.82
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	86.7
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	86.59
3cps_A	354	Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, g	86.28
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	86.2
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	86.18
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	86.17
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	86.1
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	86.04
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	85.98
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	85.95
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	85.92
3ghy_A	335	Ketopantoate reductase protein; oxidoreductase, NA	85.82
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	85.78
3cmc_O	334	GAPDH, glyceraldehyde-3-phosphate dehydrogenase; m	85.75
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	85.55
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	85.49
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	85.38
3tl2_A	315	Malate dehydrogenase; center for structural genomi	85.35
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	85.34
4gcm_A	312	TRXR, thioredoxin reductase; FAD/NAD-linked reduct	85.23
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	85.15
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	85.12
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	85.1
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	84.92
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	84.83
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	84.8
4a5l_A	314	Thioredoxin reductase; oxidoreductase, redox metab	84.54
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	84.41
1cf2_P	337	Protein (glyceraldehyde-3-phosphate dehydrogenase)	84.36
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	84.27
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	84.18
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	84.14
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	84.05
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	84.05
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	83.94
3hwr_A	318	2-dehydropantoate 2-reductase; YP_299159.1, PANE/A	83.9
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	83.83
3b1j_A	339	Glyceraldehyde 3-phosphate dehydrogenase (NADP+);	83.73
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	83.71
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	83.65
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	83.63
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	83.42
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	83.29
3e5r_O	337	PP38, glyceraldehyde-3-phosphate dehydrogenase, cy	83.29
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	83.23
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	83.13
2y1e_A	398	1-deoxy-D-xylulose 5-phosphate reductoisomerase; o	83.11
1rm4_O	337	Glyceraldehyde 3-phosphate dehydrogenase A; rossma	82.96
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	82.86
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	82.81
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	82.65
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	82.52
1r0k_A	388	1-deoxy-D-xylulose 5-phosphate reductoisomerase; N	82.37
1gad_O	330	D-glyceraldehyde-3-phosphate dehydrogenase; oxidor	82.36
3a06_A	376	1-deoxy-D-xylulose 5-phosphate reductoisomerase; M	82.29
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	82.08
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	81.93
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	81.92
3au8_A	488	1-deoxy-D-xylulose 5-phosphate reductoisomerase; N	81.65
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	81.58
1dlj_A	402	UDP-glucose dehydrogenase; rossmann fold, ternary	81.55
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	81.54
1yqg_A	263	Pyrroline-5-carboxylate reductase; structural geno	81.5
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	81.41
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	81.38
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	81.35
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	81.23
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	81.23
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	81.21
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	81.18
2x5j_O	339	E4PDH, D-erythrose-4-phosphate dehydrogenase; oxid	81.14
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	81.11
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	81.06
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	80.82
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	80.72

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=98.80  E-value=3.4e-09  Score=73.88  Aligned_cols=30  Identities=27%  Similarity=0.440  Sum_probs=28.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|+|||||||||++++++|+++||+|+.+
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l   30 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLV   30 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            679999999999999999999999999865

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=98.55  E-value=5e-08  Score=69.95  Aligned_cols=36  Identities=14%  Similarity=0.207  Sum_probs=28.5

Q ss_pred             hhhhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          47 QEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        47 ~~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+.++++|+|||||||||++++++|+++|++|..+
T Consensus         6 ~~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~   41 (404)
T 1i24_A            6 HHHHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIV   41 (404)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             ccccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEE
Confidence            445678999999999999999999999999998865

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=98.51  E-value=9.4e-08  Score=67.18  Aligned_cols=31  Identities=35%  Similarity=0.488  Sum_probs=28.5

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++|+||||+||||++++++|+++|++|+.+
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~   39 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTT   39 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEE
Confidence            5789999999999999999999999998754

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=98.50  E-value=1.1e-07  Score=64.06  Aligned_cols=35  Identities=17%  Similarity=0.379  Sum_probs=29.3

Q ss_pred             hhhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          48 EFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        48 ~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..+++|+|+|||||||+|++++++|+++|++|..+
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~   51 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAM   51 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEE
Confidence            44678999999999999999999999999998765

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=98.49  E-value=1e-07  Score=66.32  Aligned_cols=31  Identities=35%  Similarity=0.544  Sum_probs=28.1

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++|+||||+||||++++++|+++|++|..+
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~   31 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTT   31 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEE
Confidence            4689999999999999999999999998754

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=98.48  E-value=9.4e-08  Score=67.40  Aligned_cols=35  Identities=17%  Similarity=0.238  Sum_probs=27.6

Q ss_pred             hhhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          48 EFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        48 ~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ...++++|+|||||||||++++++|+++|++|..+
T Consensus        15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~   49 (347)
T 4id9_A           15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGF   49 (347)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCEEEE
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEE
Confidence            34567899999999999999999999999999765

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=98.48  E-value=1e-07  Score=66.55  Aligned_cols=34  Identities=32%  Similarity=0.472  Sum_probs=30.5

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++|+||||+||||++++++|+++|++|..+
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~   41 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGT   41 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEE
Confidence            3567899999999999999999999999998765

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=98.47  E-value=1.4e-07  Score=66.67  Aligned_cols=33  Identities=42%  Similarity=0.717  Sum_probs=30.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++|+|||||||||++++++|+++|++|..+
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~   55 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGL   55 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999998765

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=98.46  E-value=1.1e-07  Score=66.86  Aligned_cols=32  Identities=41%  Similarity=0.603  Sum_probs=28.0

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++|+||||+||||++++++|+++|++|..+
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~   35 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRAT   35 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEE
Confidence            45789999999999999999999999998754

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=98.44  E-value=1.8e-07  Score=64.77  Aligned_cols=32  Identities=28%  Similarity=0.543  Sum_probs=28.9

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..++|+|||||||+|++++++|+++|++|..+
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~   37 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASGEEVTVL   37 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            45789999999999999999999999998765

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=98.43  E-value=1.7e-07  Score=65.45  Aligned_cols=32  Identities=25%  Similarity=0.310  Sum_probs=28.6

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++|+||||+||||++++++|+++|++|..+
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~   33 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGA   33 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            45789999999999999999999999998764

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=98.42  E-value=2.1e-07  Score=61.40  Aligned_cols=30  Identities=27%  Similarity=0.309  Sum_probs=27.7

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|+|||||||+|++++++|+++|++|..+
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~   30 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAI   30 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEE
Confidence            479999999999999999999999998765

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=98.42  E-value=1.7e-07  Score=66.12  Aligned_cols=36  Identities=31%  Similarity=0.401  Sum_probs=31.7

Q ss_pred             hhhhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          47 QEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        47 ~~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+++|+|+||||+||||++++++|+++|++|..+
T Consensus        15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~   50 (330)
T 2pzm_A           15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVI   50 (330)
T ss_dssp             CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEE
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            344677899999999999999999999999998765

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=98.41  E-value=2.6e-07  Score=65.48  Aligned_cols=34  Identities=32%  Similarity=0.514  Sum_probs=30.7

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+++|+||||+||||++++++|+++|++|..+
T Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~   39 (357)
T 1rkx_A            6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGY   39 (357)
T ss_dssp             HHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             hhCCCEEEEECCCchHHHHHHHHHHhCCCeEEEE
Confidence            4567899999999999999999999999998765

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=98.40  E-value=2.1e-07  Score=65.61  Aligned_cols=32  Identities=25%  Similarity=0.477  Sum_probs=26.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      .++++|+|||||||||++++++|+++|+++..
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v   53 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKI   53 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEE
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEE
Confidence            45689999999999999999999999955443

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=98.40  E-value=2.4e-07  Score=61.49  Aligned_cols=30  Identities=30%  Similarity=0.408  Sum_probs=27.7

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|+|||||||+|++++++|+++|++|..+
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~   30 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAV   30 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEE
Confidence            469999999999999999999999998765

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=98.40  E-value=2.3e-07  Score=64.61  Aligned_cols=35  Identities=23%  Similarity=0.395  Sum_probs=28.2

Q ss_pred             hhhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          48 EFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        48 ~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+.++|+||||+||||++++++|+++|++|..+
T Consensus         8 ~~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~   42 (321)
T 2pk3_A            8 HHHGSMRALITGVAGFVGKYLANHLTEQNVEVFGT   42 (321)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cccCcceEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            34556889999999999999999999999998765

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=98.39  E-value=2.6e-07  Score=64.14  Aligned_cols=30  Identities=33%  Similarity=0.638  Sum_probs=27.7

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|+|||||||||++++++|+++|++|..+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~   30 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVV   30 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEE
Confidence            579999999999999999999999998765

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=98.39  E-value=2.6e-07  Score=65.26  Aligned_cols=35  Identities=29%  Similarity=0.445  Sum_probs=28.9

Q ss_pred             hhhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          48 EFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        48 ~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..+..++|+|||||||||++++++|++.|++|..+
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~   57 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVV   57 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEE
Confidence            33567899999999999999999999999998765

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=98.38  E-value=2.8e-07  Score=65.62  Aligned_cols=33  Identities=27%  Similarity=0.550  Sum_probs=29.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHc-CCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRC-CPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~-g~~V~~I   82 (84)
                      +..++|+|||||||||++++++|+++ |++|..+
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~   55 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGM   55 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEE
Confidence            45689999999999999999999998 8998765

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=98.37  E-value=2.7e-07  Score=66.27  Aligned_cols=39  Identities=31%  Similarity=0.521  Sum_probs=31.6

Q ss_pred             ChhhhhhccceEEEeccCcchHHHHHHHHHHc-CC-ceEEE
Q psy8179          44 SPIQEFYKDQTVFITGATGFLGSLLVEKLLRC-CP-QMLSL   82 (84)
Q Consensus        44 ~~~~~~~~~~~vlitGatGfiG~~l~~~ll~~-g~-~V~~I   82 (84)
                      +....++++++|+|||||||+|++++++|++. |+ +|..+
T Consensus        13 ~~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~   53 (344)
T 2gn4_A           13 PNHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVY   53 (344)
T ss_dssp             ---CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEE
T ss_pred             ccHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEE
Confidence            45556678899999999999999999999999 87 77654

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=98.35  E-value=3.6e-07  Score=65.13  Aligned_cols=33  Identities=33%  Similarity=0.536  Sum_probs=30.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHH--cCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLR--CCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~--~g~~V~~I   82 (84)
                      +++++|+||||+||||++++++|++  .|++|..+
T Consensus         8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~   42 (362)
T 3sxp_A            8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVL   42 (362)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEE
Confidence            4568999999999999999999999  89998765

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=98.35  E-value=3.7e-07  Score=64.48  Aligned_cols=34  Identities=32%  Similarity=0.432  Sum_probs=28.9

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++|+||||+||||++++++|+++|++|..+
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~   51 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGI   51 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEE
Confidence            3567899999999999999999999999998765

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=98.34  E-value=4.1e-07  Score=63.83  Aligned_cols=32  Identities=25%  Similarity=0.442  Sum_probs=29.0

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++|+||||+||||++++++|+++|++|..+
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~   35 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIA   35 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEE
Confidence            45789999999999999999999999998765

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=98.33  E-value=4e-07  Score=63.72  Aligned_cols=32  Identities=28%  Similarity=0.362  Sum_probs=28.1

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++|+||||+||||++++++|+++|++|..+
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~   44 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGL   44 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEE
Confidence            45789999999999999999999999998765

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=98.33  E-value=4.3e-07  Score=63.37  Aligned_cols=30  Identities=33%  Similarity=0.504  Sum_probs=28.0

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|+|||||||+|++++++|+++|++|..+
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~   32 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIIL   32 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEE
Confidence            689999999999999999999999998765

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=98.33  E-value=2.5e-07  Score=63.75  Aligned_cols=33  Identities=24%  Similarity=0.348  Sum_probs=28.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ...++|+|||||||||++++++|+++|++|..+
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~   42 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPT   42 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEE
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEec
Confidence            345789999999999999999999999888764

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=98.33  E-value=4.6e-07  Score=63.47  Aligned_cols=31  Identities=19%  Similarity=0.308  Sum_probs=28.3

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .|+|+||||+||||++++++|+++|++|..+
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~   43 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLI   43 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            3589999999999999999999999998765

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=98.33  E-value=4.1e-07  Score=63.31  Aligned_cols=31  Identities=26%  Similarity=0.437  Sum_probs=28.3

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++|+|||||||||++++++|+++|++|..+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~   32 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGC   32 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEE
Confidence            4689999999999999999999999998764

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=98.32  E-value=4.5e-07  Score=63.48  Aligned_cols=30  Identities=33%  Similarity=0.493  Sum_probs=27.8

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|+|||||||||++++++|++.|++|..+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~   31 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVF   31 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEE
Confidence            579999999999999999999999998765

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=98.32  E-value=4e-07  Score=60.63  Aligned_cols=30  Identities=27%  Similarity=0.538  Sum_probs=27.9

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|+|||||||+|++++++|+++|++|..+
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~   34 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAV   34 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEE
Confidence            689999999999999999999999988765

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=98.31  E-value=5.8e-07  Score=58.53  Aligned_cols=30  Identities=23%  Similarity=0.292  Sum_probs=27.8

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|+||||+||+|++++++|+++|++|..+
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~   33 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVL   33 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEE
Confidence            689999999999999999999999988765

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=98.31  E-value=5.3e-07  Score=63.90  Aligned_cols=33  Identities=36%  Similarity=0.607  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++|+|||||||||++++++|++.|++|..+
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~   57 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGL   57 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            456899999999999999999999999988765

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=98.30  E-value=4.6e-07  Score=60.44  Aligned_cols=30  Identities=30%  Similarity=0.413  Sum_probs=27.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|+||||+||+|++++++|+++|++|..+
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~   30 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAG   30 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEE
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            479999999999999999999999998765

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=98.29  E-value=1.9e-07  Score=69.87  Aligned_cols=55  Identities=33%  Similarity=0.375  Sum_probs=40.0

Q ss_pred             CcccccccccCCCCCC---ChhhhhhccceEEEeccCcchHHHHHHHHHHc---CCceEEE
Q psy8179          28 DKEDDAEDIIWDDDTP---SPIQEFYKDQTVFITGATGFLGSLLVEKLLRC---CPQMLSL   82 (84)
Q Consensus        28 ~~e~~~~~~l~~~~~~---~~~~~~~~~~~vlitGatGfiG~~l~~~ll~~---g~~V~~I   82 (84)
                      .++..+++++++....   ........+++|+|||||||||++++++|++.   |++|..+
T Consensus        46 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l  106 (478)
T 4dqv_A           46 ASDLTLDRFIDADTLATAVNLPGPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICL  106 (478)
T ss_dssp             GGGCCGGGTSCHHHHHHHHTSCCCCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred             cccCCHHHhcccccccCCCCCCCCCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEE
Confidence            4566777777765211   11112245789999999999999999999998   8888765

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=98.28  E-value=7.1e-07  Score=62.75  Aligned_cols=31  Identities=29%  Similarity=0.490  Sum_probs=28.5

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++|+||||+||||++++++|+++|++|..+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~   32 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVI   32 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            3689999999999999999999999998765

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=98.28  E-value=6.5e-07  Score=62.66  Aligned_cols=31  Identities=23%  Similarity=0.528  Sum_probs=27.1

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcC--CceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCC--PQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g--~~V~~I   82 (84)
                      +|+|+||||+||||++++++|+++|  ++|..+
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~   35 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINI   35 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEE
Confidence            4689999999999999999999986  677654

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=98.28  E-value=4e-07  Score=63.39  Aligned_cols=30  Identities=33%  Similarity=0.459  Sum_probs=27.4

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      .++|+||||+||||++++++|+++|++|..
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~   32 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELV   32 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEE
Confidence            478999999999999999999999998764

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=98.27  E-value=6.4e-07  Score=62.34  Aligned_cols=30  Identities=40%  Similarity=0.635  Sum_probs=27.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|+||||+||||++++++|+++|++|..+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~   30 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVL   30 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEE
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEE
Confidence            479999999999999999999999998754

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=98.26  E-value=7.6e-07  Score=62.49  Aligned_cols=30  Identities=30%  Similarity=0.558  Sum_probs=27.5

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|+||||+||||++++++|+++|++|..+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~   30 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIIL   30 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            479999999999999999999999998764

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=98.26  E-value=7.7e-07  Score=62.15  Aligned_cols=30  Identities=27%  Similarity=0.546  Sum_probs=27.7

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|+||||+||||++++++|+++|++|..+
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~   31 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVV   31 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEE
Confidence            579999999999999999999999998765

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=98.25  E-value=9.9e-07  Score=63.34  Aligned_cols=33  Identities=33%  Similarity=0.584  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcC-CceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCC-PQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g-~~V~~I   82 (84)
                      +.+++|+|||||||||++++++|+++| ++|..+
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~   63 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVV   63 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEE
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEE
Confidence            456889999999999999999999999 888764

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=98.24  E-value=7.8e-07  Score=63.12  Aligned_cols=33  Identities=27%  Similarity=0.529  Sum_probs=27.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcC-CceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCC-PQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g-~~V~~I   82 (84)
                      +.+++|+||||+||||++++++|+++| ++|..+
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~   77 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVV   77 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEE
Confidence            456789999999999999999999999 888765

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=98.24  E-value=8.3e-07  Score=62.96  Aligned_cols=32  Identities=31%  Similarity=0.502  Sum_probs=28.0

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..++|+|||||||+|+++++.|++.|++|..+
T Consensus         9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l   40 (346)
T 3i6i_A            9 PKGRVLIAGATGFIGQFVATASLDAHRPTYIL   40 (346)
T ss_dssp             --CCEEEECTTSHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEE
Confidence            35689999999999999999999999998765

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=98.24  E-value=6.6e-07  Score=62.92  Aligned_cols=33  Identities=21%  Similarity=0.478  Sum_probs=28.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcC-------CceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCC-------PQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g-------~~V~~I   82 (84)
                      +++++|+||||+||||++++++|+++|       ++|..+
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~   51 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLI   51 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEE
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEE
Confidence            467889999999999999999999998       676543

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=98.23  E-value=3.6e-07  Score=62.81  Aligned_cols=30  Identities=37%  Similarity=0.436  Sum_probs=27.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|+|||||||||++++++|+++|++|..+
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~   35 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPF   35 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEE
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEe
Confidence            479999999999999999999999988765

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=98.23  E-value=1e-06  Score=61.67  Aligned_cols=30  Identities=40%  Similarity=0.660  Sum_probs=27.1

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc-CCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC-CPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~-g~~V~~I   82 (84)
                      |+|+|||||||||++++++|+++ |++|..+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~   31 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGL   31 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEE
Confidence            47999999999999999999998 8988765

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=98.22  E-value=1.1e-06  Score=62.35  Aligned_cols=30  Identities=37%  Similarity=0.419  Sum_probs=27.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|+||||+||||++++++|+++|++|..+
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~   31 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGI   31 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            679999999999999999999999988754

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=98.22  E-value=1.1e-06  Score=60.73  Aligned_cols=31  Identities=23%  Similarity=0.422  Sum_probs=28.1

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++|+|||||||+|++++++|+++|++|..+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~   32 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYAL   32 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEE
Confidence            3679999999999999999999999998764

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=98.22  E-value=1e-06  Score=66.51  Aligned_cols=31  Identities=32%  Similarity=0.472  Sum_probs=28.8

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .|+|+|||||||||+++++.|+++|++|..+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l  177 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQL  177 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            5789999999999999999999999998765

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=98.22  E-value=1.2e-06  Score=58.88  Aligned_cols=33  Identities=27%  Similarity=0.515  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCC--ceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCP--QMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~--~V~~I   82 (84)
                      +++++++||||+||||++++++|+++|+  +|..+
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~   50 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLI   50 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEE
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEE
Confidence            4578999999999999999999999998  88654

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=98.21  E-value=1.2e-06  Score=62.77  Aligned_cols=31  Identities=26%  Similarity=0.534  Sum_probs=28.2

Q ss_pred             cceEEEeccCcchHHHHHHHHH-HcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLL-RCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll-~~g~~V~~I   82 (84)
                      +|+|+||||+||||++++++|+ +.|++|..+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~   33 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIV   33 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEE
Confidence            3689999999999999999999 999998765

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=98.20  E-value=1.2e-06  Score=63.06  Aligned_cols=32  Identities=25%  Similarity=0.396  Sum_probs=28.9

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..++|+||||+||||++++++|+++|++|..+
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~   59 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIAS   59 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEE
Confidence            35789999999999999999999999998765

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=98.20  E-value=1.1e-06  Score=62.77  Aligned_cols=30  Identities=40%  Similarity=0.399  Sum_probs=27.8

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|+||||+||||++++++|++.|++|..+
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~   58 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGL   58 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEE
Confidence            589999999999999999999999988765

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=98.19  E-value=9e-07  Score=61.24  Aligned_cols=31  Identities=26%  Similarity=0.498  Sum_probs=28.0

Q ss_pred             cceEEEeccCcchHHHHHHHHHHc--CCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRC--CPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~--g~~V~~I   82 (84)
                      +++|+|||||||||++++++|+++  |++|..+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~   34 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIAS   34 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEE
Confidence            367999999999999999999998  8888765

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=98.19  E-value=8.8e-07  Score=60.65  Aligned_cols=28  Identities=14%  Similarity=0.466  Sum_probs=25.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      +++++|+|||||||||++++++|+++|+
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~   31 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG   31 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC
Confidence            4678999999999999999999999875

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=98.18  E-value=1.3e-06  Score=61.39  Aligned_cols=30  Identities=27%  Similarity=0.502  Sum_probs=27.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc--CCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC--CPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~--g~~V~~I   82 (84)
                      ++|+||||+||||++++++|+++  |++|..+
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~   36 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVL   36 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEE
Confidence            68999999999999999999998  7888764

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=98.18  E-value=9.2e-07  Score=60.97  Aligned_cols=29  Identities=24%  Similarity=0.377  Sum_probs=26.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|+|||||||+|++++++|+ +|++|..+
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~   29 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIAL   29 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEE
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEe
Confidence            479999999999999999999 89988764

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=98.17  E-value=1.5e-06  Score=60.20  Aligned_cols=31  Identities=26%  Similarity=0.467  Sum_probs=28.1

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++|+|||||||+|++++++|+++|++|+.+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~   34 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVL   34 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEE
Confidence            3679999999999999999999999998764

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=98.16  E-value=1.7e-06  Score=59.91  Aligned_cols=31  Identities=23%  Similarity=0.434  Sum_probs=28.0

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++|+|||||||+|+++++.|+++|++|..+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l   34 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLL   34 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEE
Confidence            3679999999999999999999999998754

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=98.16  E-value=7.2e-07  Score=62.95  Aligned_cols=31  Identities=26%  Similarity=0.372  Sum_probs=27.6

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcC-----CceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCC-----PQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g-----~~V~~I   82 (84)
                      +|+|+|||||||+|++++++|+++|     ++|..+
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~   36 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGV   36 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEE
Confidence            3689999999999999999999998     887654

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=98.16  E-value=1.9e-06  Score=57.58  Aligned_cols=32  Identities=31%  Similarity=0.326  Sum_probs=28.4

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHc--CCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRC--CPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~--g~~V~~I   82 (84)
                      ++++|+||||+||+|++++++|+++  |++|..+
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~   36 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGL   36 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEE
Confidence            4578999999999999999999999  7888764

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=98.15  E-value=1.7e-06  Score=59.61  Aligned_cols=30  Identities=23%  Similarity=0.390  Sum_probs=27.1

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc-CCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC-CPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~-g~~V~~I   82 (84)
                      |+|+|||||||+|++++++|.+. |++|+.+
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~   31 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIG   31 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEE
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEE
Confidence            46999999999999999999987 8998765

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=98.15  E-value=1.9e-06  Score=57.87  Aligned_cols=30  Identities=27%  Similarity=0.408  Sum_probs=27.5

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++||||+||||++++++|+++|++|..+
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~   31 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGI   31 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEE
Confidence            479999999999999999999999988765

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=98.15  E-value=2e-06  Score=60.08  Aligned_cols=31  Identities=23%  Similarity=0.466  Sum_probs=28.2

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++|+|||||||+|++++++|+++|++|+.+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~   34 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIY   34 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEE
Confidence            3679999999999999999999999998765

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=98.14  E-value=1.8e-06  Score=60.99  Aligned_cols=30  Identities=27%  Similarity=0.657  Sum_probs=26.7

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc-CCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC-CPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~-g~~V~~I   82 (84)
                      |+|+||||+||||++++++|++. |++|..+
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~   31 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNI   31 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEE
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEE
Confidence            46999999999999999999998 7888754

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=98.13  E-value=1.9e-06  Score=61.44  Aligned_cols=30  Identities=37%  Similarity=0.400  Sum_probs=27.7

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|+||||+||||++++++|+++|++|..+
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~   54 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGI   54 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            579999999999999999999999988765

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=98.13  E-value=2.3e-06  Score=57.65  Aligned_cols=33  Identities=18%  Similarity=0.290  Sum_probs=29.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~   37 (244)
T 1cyd_A            5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAV   37 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999988654

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=98.13  E-value=1.5e-06  Score=62.20  Aligned_cols=29  Identities=31%  Similarity=0.540  Sum_probs=26.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCC-ceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCP-QMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~-~V~~   81 (84)
                      |+|+|||||||+|++++++|+++|+ +|..
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~   30 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFE   30 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEE
Confidence            5799999999999999999999998 7654

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=98.13  E-value=9.2e-07  Score=60.65  Aligned_cols=30  Identities=37%  Similarity=0.708  Sum_probs=27.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc--CCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC--CPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~--g~~V~~I   82 (84)
                      |+|+|||||||+|++++++|+++  |++|..+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~   32 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAI   32 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEE
Confidence            46999999999999999999998  8998765

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=98.12  E-value=2.2e-06  Score=59.06  Aligned_cols=31  Identities=26%  Similarity=0.326  Sum_probs=27.6

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.++|+||| +||+|++++++|+++|++|..+
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~   32 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGL   32 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEE
Confidence            346899999 5999999999999999998765

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=98.12  E-value=1e-06  Score=60.82  Aligned_cols=31  Identities=26%  Similarity=0.399  Sum_probs=28.0

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++|+||||+||||++++++|++.|++|..+
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~   33 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLA   33 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEE
Confidence            4789999999999999999999999887654

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=98.11  E-value=2.2e-06  Score=60.05  Aligned_cols=30  Identities=33%  Similarity=0.635  Sum_probs=26.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc---C---CceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC---C---PQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~---g---~~V~~I   82 (84)
                      |+|+|||||||||++++++|+++   |   ++|..+
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~   36 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVL   36 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEE
Confidence            47999999999999999999996   7   777654

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=98.11  E-value=2.1e-06  Score=59.21  Aligned_cols=29  Identities=31%  Similarity=0.578  Sum_probs=26.4

Q ss_pred             eEEEeccCcchHHHHHHHHHHcC-CceEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCC-PQMLSL   82 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g-~~V~~I   82 (84)
                      +|+|||||||||++++++|+++| ++|..+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~   30 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVV   30 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEE
Confidence            48999999999999999999999 888765

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=98.11  E-value=2.7e-06  Score=57.49  Aligned_cols=33  Identities=21%  Similarity=0.221  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~   37 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLH   37 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=98.09  E-value=2.8e-06  Score=59.31  Aligned_cols=30  Identities=23%  Similarity=0.483  Sum_probs=27.7

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|+|||||||+|++++++|+++|++|+.+
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l   41 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVF   41 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEE
Confidence            479999999999999999999999998765

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=98.08  E-value=1.9e-06  Score=58.32  Aligned_cols=32  Identities=19%  Similarity=0.230  Sum_probs=28.2

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcC-CceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCC-PQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g-~~V~~I   82 (84)
                      ..++|+||||+|+||++++++|+++| ++|..+
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~   54 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLF   54 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEE
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEE
Confidence            35789999999999999999999999 777654

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=98.08  E-value=2e-06  Score=56.50  Aligned_cols=30  Identities=27%  Similarity=0.577  Sum_probs=26.8

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCC--ceEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCP--QMLS   81 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~--~V~~   81 (84)
                      +++|+||||+||+|++++++|+++|+  +|..
T Consensus         5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~   36 (215)
T 2a35_A            5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIA   36 (215)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEEC
T ss_pred             CceEEEECCCcHHHHHHHHHHHhCCCCCeEEE
Confidence            57899999999999999999999987  6653

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=98.08  E-value=3.1e-06  Score=58.65  Aligned_cols=31  Identities=23%  Similarity=0.279  Sum_probs=28.1

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcC-CceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCC-PQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g-~~V~~I   82 (84)
                      .++|+|||||||+|++++++|+++| ++|+.+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~   36 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVV   36 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEE
Confidence            4689999999999999999999998 888765

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=98.08  E-value=2.2e-06  Score=58.16  Aligned_cols=35  Identities=23%  Similarity=0.245  Sum_probs=31.0

Q ss_pred             hhhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          48 EFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        48 ~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ...++++++||||+|+||++++++|+++|++|..+
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~   44 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIIS   44 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            34677899999999999999999999999988654

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=98.07  E-value=2.9e-06  Score=58.20  Aligned_cols=29  Identities=17%  Similarity=0.243  Sum_probs=27.0

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|+|||| ||+|++++++|+++|++|..+
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~   34 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGT   34 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEE
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEE
Confidence            68999998 999999999999999998765

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=98.06  E-value=3.5e-06  Score=57.71  Aligned_cols=33  Identities=21%  Similarity=0.393  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus        14 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~   46 (278)
T 2bgk_A           14 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIA   46 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=98.05  E-value=3.3e-06  Score=65.40  Aligned_cols=33  Identities=24%  Similarity=0.415  Sum_probs=28.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++|+||||+||||++++++|+++|++|..+
T Consensus         9 ~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~   41 (699)
T 1z45_A            9 STSKIVLVTGGAGYIGSHTVVELIENGYDCVVA   41 (699)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEE
Confidence            456899999999999999999999999998765

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=98.04  E-value=4.3e-06  Score=60.29  Aligned_cols=31  Identities=23%  Similarity=0.293  Sum_probs=28.5

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++|+|||||||+|++++++|+++|++|+.+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~   35 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQ   35 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEE
Confidence            4689999999999999999999999998765

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=98.04  E-value=4.5e-06  Score=56.66  Aligned_cols=33  Identities=15%  Similarity=0.273  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus        11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~   43 (260)
T 3awd_A           11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIA   43 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999988654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=98.03  E-value=3.3e-06  Score=57.07  Aligned_cols=33  Identities=15%  Similarity=0.197  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~   41 (255)
T 1fmc_A            9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVS   41 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988754

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=98.03  E-value=2.3e-06  Score=62.41  Aligned_cols=31  Identities=35%  Similarity=0.601  Sum_probs=28.0

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++|+|||||||||++++++|++.|++|..+
T Consensus        69 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~   99 (427)
T 4f6c_A           69 LGNTLLTGATGFLGAYLIEALQGYSHRIYCF   99 (427)
T ss_dssp             CEEEEEECTTSHHHHHHHHHHTTTEEEEEEE
T ss_pred             CCEEEEecCCcHHHHHHHHHHHcCCCEEEEE
Confidence            4689999999999999999999998888765

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=98.02  E-value=3e-06  Score=58.97  Aligned_cols=25  Identities=36%  Similarity=0.666  Sum_probs=22.7

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      ++|+|||||||||++++++|+++|+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~   26 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNE   26 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCC
Confidence            4799999999999999999999983

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=98.02  E-value=5e-06  Score=56.24  Aligned_cols=33  Identities=12%  Similarity=0.205  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~   41 (254)
T 2wsb_A            9 LDGACAAVTGAGSGIGLEICRAFAASGARLILI   41 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999988654

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=98.02  E-value=4.1e-06  Score=56.34  Aligned_cols=33  Identities=21%  Similarity=0.347  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         5 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~   37 (248)
T 2pnf_A            5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIIT   37 (248)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            456889999999999999999999999988654

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.02  E-value=5e-06  Score=55.62  Aligned_cols=31  Identities=19%  Similarity=0.250  Sum_probs=28.3

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++||||+|+||++++++|+++|++|..+
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~   32 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVL   32 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence            4789999999999999999999999998764

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=98.01  E-value=5.4e-06  Score=55.88  Aligned_cols=33  Identities=21%  Similarity=0.293  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~   37 (244)
T 3d3w_A            5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAV   37 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            456889999999999999999999999988654

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=98.01  E-value=3.5e-06  Score=58.50  Aligned_cols=29  Identities=24%  Similarity=0.430  Sum_probs=26.1

Q ss_pred             eEEEeccCcchHHHHHHHHHHc--CCceEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRC--CPQMLSL   82 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~--g~~V~~I   82 (84)
                      +|+||||+||||++++++|+++  |++|..+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~   31 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIAS   31 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence            4899999999999999999998  7888764

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=98.01  E-value=5e-06  Score=56.70  Aligned_cols=33  Identities=18%  Similarity=0.134  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus        19 ~~~k~vlItGasggiG~~la~~l~~~G~~v~~~   51 (274)
T 1ja9_A           19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVN   51 (274)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=98.01  E-value=4.9e-06  Score=56.04  Aligned_cols=33  Identities=24%  Similarity=0.259  Sum_probs=29.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~   35 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLN   35 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            456889999999999999999999999988765

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.01  E-value=5.4e-06  Score=56.87  Aligned_cols=36  Identities=14%  Similarity=0.136  Sum_probs=30.7

Q ss_pred             hhhhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          47 QEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        47 ~~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ...+++++++||||+|+||++++++|+++|++|..+
T Consensus        14 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~   49 (249)
T 1o5i_A           14 ELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTIC   49 (249)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             HhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            344678999999999999999999999999988654

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.00  E-value=5e-06  Score=57.66  Aligned_cols=36  Identities=14%  Similarity=0.108  Sum_probs=31.0

Q ss_pred             hhhhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          47 QEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        47 ~~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ...+++++++||||+|+||++++++|+++|++|..+
T Consensus        16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~   51 (267)
T 1vl8_A           16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVA   51 (267)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            344667899999999999999999999999988654

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.99  E-value=6.1e-06  Score=56.11  Aligned_cols=33  Identities=15%  Similarity=0.196  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~   37 (264)
T 2pd6_A            5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAAC   37 (264)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            456889999999999999999999999988654

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.99  E-value=7.9e-06  Score=56.48  Aligned_cols=33  Identities=21%  Similarity=0.475  Sum_probs=30.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|++.|++|..+
T Consensus        30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~   62 (279)
T 1xg5_A           30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGC   62 (279)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=97.99  E-value=4.7e-06  Score=56.59  Aligned_cols=33  Identities=12%  Similarity=0.310  Sum_probs=29.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus        12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~   44 (265)
T 1h5q_A           12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVI   44 (265)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEE
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEE
Confidence            567899999999999999999999999887654

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=97.98  E-value=6.6e-06  Score=57.15  Aligned_cols=34  Identities=24%  Similarity=0.244  Sum_probs=30.4

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++++||||+|+||++++++|+++|++|..+
T Consensus        23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~   56 (302)
T 1w6u_A           23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIA   56 (302)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            3567899999999999999999999999988654

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=97.98  E-value=4.6e-06  Score=56.61  Aligned_cols=29  Identities=31%  Similarity=0.416  Sum_probs=25.7

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+++||||+||+|++++++|++ |++|..+
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~   29 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RHEVIKV   29 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TSCEEEE
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CCeEEEe
Confidence            4699999999999999999995 7888765

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.98  E-value=7e-06  Score=55.81  Aligned_cols=33  Identities=18%  Similarity=0.236  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~   37 (261)
T 1gee_A            5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVN   37 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.98  E-value=4.9e-06  Score=56.20  Aligned_cols=33  Identities=18%  Similarity=0.245  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~   36 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMIT   36 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999988654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.97  E-value=5.4e-06  Score=57.28  Aligned_cols=32  Identities=16%  Similarity=0.279  Sum_probs=29.0

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++||||+|+||++++++|+++|++|..+
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~   35 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGT   35 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            46889999999999999999999999988654

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=97.97  E-value=3.5e-06  Score=57.56  Aligned_cols=29  Identities=38%  Similarity=0.713  Sum_probs=26.4

Q ss_pred             eEEEeccCcchHHHHHHHHHHc--CCceEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRC--CPQMLSL   82 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~--g~~V~~I   82 (84)
                      +|+|||||||+|++++++|+++  |++|..+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~   31 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAI   31 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEE
Confidence            4899999999999999999998  8998765

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.97  E-value=6e-06  Score=55.87  Aligned_cols=32  Identities=19%  Similarity=0.255  Sum_probs=28.7

Q ss_pred             ccceEEEeccCcchHHHHHHHHHH-cCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLR-CCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~-~g~~V~~I   82 (84)
                      ++++++||||+|+||++++++|++ .|++|..+
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~   35 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLT   35 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEE
Confidence            467899999999999999999999 89987654

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=97.96  E-value=5.8e-06  Score=54.26  Aligned_cols=29  Identities=28%  Similarity=0.479  Sum_probs=26.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+++||||+|+||++++++|+ +|++|..+
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~   32 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITA   32 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEE
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEE
Confidence            479999999999999999999 99988764

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=97.96  E-value=7.4e-06  Score=57.05  Aligned_cols=34  Identities=21%  Similarity=0.371  Sum_probs=30.4

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++++||||+|+||++++++|+++|++|..+
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~   48 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIA   48 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            3567899999999999999999999999988754

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=97.96  E-value=7e-06  Score=55.19  Aligned_cols=31  Identities=23%  Similarity=0.249  Sum_probs=28.1

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++||||+|+||++++++|+++|++|..+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~   31 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVN   31 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            3689999999999999999999999998764

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=97.95  E-value=1.5e-06  Score=59.55  Aligned_cols=30  Identities=23%  Similarity=0.284  Sum_probs=26.8

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|+||||+||||++++++|++.|++|..+
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~   32 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLS   32 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEEC
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEE
Confidence            579999999999999999999998877643

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=97.95  E-value=7e-06  Score=56.02  Aligned_cols=33  Identities=15%  Similarity=0.127  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~   34 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVN   34 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            356889999999999999999999999998654

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.95  E-value=8.1e-06  Score=56.00  Aligned_cols=33  Identities=12%  Similarity=0.223  Sum_probs=29.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   42 (263)
T 3ak4_A           10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIA   42 (263)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence            457899999999999999999999999988654

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.95  E-value=8.2e-06  Score=58.18  Aligned_cols=33  Identities=27%  Similarity=0.361  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus         6 l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~   38 (319)
T 3ioy_A            6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIA   38 (319)
T ss_dssp             CTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEE
Confidence            457899999999999999999999999998654

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.95  E-value=7.9e-06  Score=56.16  Aligned_cols=33  Identities=21%  Similarity=0.290  Sum_probs=29.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   37 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALV   37 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEE
Confidence            456889999999999999999999999998754

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.95  E-value=9.1e-06  Score=54.09  Aligned_cols=30  Identities=23%  Similarity=0.256  Sum_probs=27.2

Q ss_pred             ceEEEeccCcchHHHHHHHHH-HcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLL-RCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll-~~g~~V~~I   82 (84)
                      ++++||||+|++|++++++|+ +.|++|..+
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~   36 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLY   36 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEE
Confidence            469999999999999999999 899988765

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=97.95  E-value=5.2e-06  Score=64.20  Aligned_cols=33  Identities=36%  Similarity=0.617  Sum_probs=28.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHc-CCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRC-CPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~-g~~V~~I   82 (84)
                      .++++|+|||||||||++++++|++. |++|..+
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~  346 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGL  346 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEE
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEE
Confidence            46688999999999999999999998 7888764

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.94  E-value=8.7e-06  Score=55.35  Aligned_cols=33  Identities=27%  Similarity=0.269  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus        10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~   42 (265)
T 2o23_A           10 VKGLVAVITGGASGLGLATAERLVGQGASAVLL   42 (265)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=97.94  E-value=8.9e-06  Score=55.80  Aligned_cols=33  Identities=15%  Similarity=0.280  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   37 (263)
T 3ai3_A            5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLV   37 (263)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            456889999999999999999999999988654

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=97.93  E-value=8.4e-06  Score=56.62  Aligned_cols=34  Identities=18%  Similarity=0.342  Sum_probs=30.4

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+++++||||+|+||++++++|+++|++|..+
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~   41 (281)
T 3svt_A            8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIV   41 (281)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            3567899999999999999999999999988654

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=97.93  E-value=7.4e-06  Score=56.96  Aligned_cols=37  Identities=24%  Similarity=0.444  Sum_probs=31.5

Q ss_pred             hhhhhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          46 IQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        46 ~~~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ....+++++++||||+|+||++++++|+++|++|..+
T Consensus         8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~   44 (269)
T 3vtz_A            8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSV   44 (269)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            3445678999999999999999999999999998654

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.93  E-value=9.6e-06  Score=55.71  Aligned_cols=33  Identities=18%  Similarity=0.279  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   38 (259)
T 4e6p_A            6 LEGKSALITGSARGIGRAFAEAYVREGATVAIA   38 (259)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=97.93  E-value=7.2e-06  Score=56.02  Aligned_cols=33  Identities=27%  Similarity=0.371  Sum_probs=29.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus        12 l~~k~vlITGasggiG~~la~~l~~~G~~V~~~   44 (266)
T 1xq1_A           12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTC   44 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999988654

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.93  E-value=9.6e-06  Score=55.63  Aligned_cols=33  Identities=15%  Similarity=0.263  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   36 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALC   36 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            457889999999999999999999999988654

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.93  E-value=7.4e-06  Score=54.80  Aligned_cols=32  Identities=25%  Similarity=0.352  Sum_probs=28.5

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcC--CceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCC--PQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g--~~V~~I   82 (84)
                      ++++++||||+|+||++++++|+++|  ++|..+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~   35 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIAT   35 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEE
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEE
Confidence            45789999999999999999999999  887654

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.92  E-value=9.6e-06  Score=55.64  Aligned_cols=33  Identities=21%  Similarity=0.272  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~   39 (260)
T 2ae2_A            7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTC   39 (260)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999988654

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.92  E-value=7.4e-06  Score=55.36  Aligned_cols=32  Identities=25%  Similarity=0.400  Sum_probs=28.7

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++++||||+|+||++++++|+++|++|..+
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~   33 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNI   33 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            46789999999999999999999999987654

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=97.92  E-value=3e-06  Score=63.44  Aligned_cols=31  Identities=35%  Similarity=0.601  Sum_probs=27.8

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++|+|||||||||++++++|.+.|++|..+
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l  180 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCF  180 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEE
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEE
Confidence            4789999999999999999998888888765

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.91  E-value=6.5e-06  Score=56.05  Aligned_cols=36  Identities=14%  Similarity=0.308  Sum_probs=28.7

Q ss_pred             hhhhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          47 QEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        47 ~~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ....++++++||||+|+||++++++|+++|++|..+
T Consensus         8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~   43 (256)
T 3ezl_A            8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAG   43 (256)
T ss_dssp             -----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEE
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            344677899999999999999999999999988654

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=97.91  E-value=1.1e-05  Score=54.46  Aligned_cols=31  Identities=19%  Similarity=0.299  Sum_probs=28.1

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++||||+|+||++++++|+++|++|..+
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~   32 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAAL   32 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            4789999999999999999999999987654

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=97.91  E-value=9.3e-06  Score=55.60  Aligned_cols=33  Identities=12%  Similarity=0.250  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus        12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   44 (260)
T 2zat_A           12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVS   44 (260)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=97.91  E-value=1.1e-05  Score=55.65  Aligned_cols=33  Identities=9%  Similarity=0.172  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   37 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFG   37 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            457899999999999999999999999988654

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=97.91  E-value=1.1e-05  Score=55.99  Aligned_cols=34  Identities=18%  Similarity=0.309  Sum_probs=30.5

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+++++||||+|+||++++++|++.|++|..+
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~   58 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVT   58 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            4677899999999999999999999999987654

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.91  E-value=1.1e-05  Score=55.87  Aligned_cols=33  Identities=21%  Similarity=0.272  Sum_probs=30.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|++.|++|..+
T Consensus        29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~   61 (272)
T 1yb1_A           29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLW   61 (272)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.90  E-value=1.1e-05  Score=55.81  Aligned_cols=34  Identities=21%  Similarity=0.236  Sum_probs=30.8

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+++++||||+|+||++++++|+++|++|..+
T Consensus        10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~   43 (278)
T 3sx2_A           10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAV   43 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEE
Confidence            3678999999999999999999999999998765

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.90  E-value=9.8e-06  Score=54.78  Aligned_cols=34  Identities=18%  Similarity=0.294  Sum_probs=30.5

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++++||||+|+||++++++|+++|++|..+
T Consensus        11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~   44 (247)
T 3i1j_A           11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLL   44 (247)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence            4678899999999999999999999999988654

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.90  E-value=9.6e-06  Score=54.41  Aligned_cols=31  Identities=23%  Similarity=0.161  Sum_probs=28.1

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++||||+|+||++++++|+++|++|..+
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~   35 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYRVGLM   35 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            4679999999999999999999999988654

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.90  E-value=1e-05  Score=55.77  Aligned_cols=33  Identities=21%  Similarity=0.263  Sum_probs=30.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         8 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~   40 (287)
T 3pxx_A            8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILF   40 (287)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEE
Confidence            567899999999999999999999999998764

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=97.89  E-value=8.5e-06  Score=54.69  Aligned_cols=30  Identities=20%  Similarity=0.193  Sum_probs=27.7

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++||||+|+||++++++|+++|++|..+
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~~v~~~   31 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGFALAIH   31 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEE
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            679999999999999999999999988765

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=97.89  E-value=1.5e-05  Score=55.20  Aligned_cols=33  Identities=24%  Similarity=0.478  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   38 (264)
T 2dtx_A            6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDL   38 (264)
T ss_dssp             GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=97.88  E-value=1.1e-05  Score=55.59  Aligned_cols=33  Identities=18%  Similarity=0.266  Sum_probs=30.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus        32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~   64 (279)
T 3ctm_A           32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIW   64 (279)
T ss_dssp             CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988754

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.88  E-value=1.1e-05  Score=54.99  Aligned_cols=33  Identities=18%  Similarity=0.274  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~   34 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVN   34 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            356889999999999999999999999988654

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.88  E-value=1.3e-05  Score=54.45  Aligned_cols=33  Identities=21%  Similarity=0.373  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~   39 (253)
T 3qiv_A            7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVA   39 (253)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999987654

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.88  E-value=1.5e-05  Score=54.95  Aligned_cols=35  Identities=20%  Similarity=0.306  Sum_probs=31.1

Q ss_pred             hhhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          48 EFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        48 ~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..+++++++||||+|+||++++++|+++|++|..+
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~   41 (264)
T 3ucx_A            7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLA   41 (264)
T ss_dssp             CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEE
T ss_pred             CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEE
Confidence            34678999999999999999999999999988654

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.88  E-value=1.3e-05  Score=55.02  Aligned_cols=33  Identities=18%  Similarity=0.202  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   37 (260)
T 2z1n_A            5 IQGKLAVVTAGSSGLGFASALELARNGARLLLF   37 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            456889999999999999999999999988654

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=97.88  E-value=1.3e-05  Score=55.95  Aligned_cols=33  Identities=30%  Similarity=0.441  Sum_probs=30.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~   46 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRGATVIMA   46 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=97.88  E-value=1.3e-05  Score=54.31  Aligned_cols=33  Identities=15%  Similarity=0.237  Sum_probs=29.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~   35 (247)
T 3lyl_A            3 LNEKVALVTGASRGIGFEVAHALASKGATVVGT   35 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            457899999999999999999999999988654

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.87  E-value=1.5e-05  Score=54.35  Aligned_cols=33  Identities=18%  Similarity=0.250  Sum_probs=28.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCc-eEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQ-MLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~-V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++ |..+
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~   36 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVIL   36 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEE
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEE
Confidence            45788999999999999999999999997 6543

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.87  E-value=1.1e-05  Score=55.16  Aligned_cols=33  Identities=24%  Similarity=0.329  Sum_probs=29.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~   34 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLN   34 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            356889999999999999999999999987654

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=97.87  E-value=1.2e-05  Score=54.50  Aligned_cols=33  Identities=24%  Similarity=0.231  Sum_probs=29.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++++++||||+|+||++++++|+++|++|..+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   37 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASI   37 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEE
Confidence            456889999999999999999999999988654

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=97.87  E-value=1e-05  Score=55.69  Aligned_cols=33  Identities=15%  Similarity=0.153  Sum_probs=28.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~   41 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVH   41 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988764

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=97.87  E-value=1.3e-05  Score=55.46  Aligned_cols=33  Identities=24%  Similarity=0.258  Sum_probs=30.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus        26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~   58 (260)
T 3un1_A           26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVAT   58 (260)
T ss_dssp             TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999998765

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.87  E-value=1.2e-05  Score=54.79  Aligned_cols=33  Identities=12%  Similarity=0.198  Sum_probs=29.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   36 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIAT   36 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            457899999999999999999999999988654

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.87  E-value=1.2e-05  Score=55.80  Aligned_cols=33  Identities=21%  Similarity=0.277  Sum_probs=29.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|++.|++|..+
T Consensus        25 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~   57 (260)
T 3gem_A           25 LSSAPILITGASQRVGLHCALRLLEHGHRVIIS   57 (260)
T ss_dssp             --CCCEEESSTTSHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999998765

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=97.87  E-value=1.3e-05  Score=55.08  Aligned_cols=33  Identities=21%  Similarity=0.271  Sum_probs=29.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   35 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLA   35 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            457899999999999999999999999988654

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.86  E-value=1.3e-05  Score=55.27  Aligned_cols=32  Identities=13%  Similarity=0.190  Sum_probs=29.3

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++++||||+|+||++++++|+++|++|..+
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~   34 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVIN   34 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEE
Confidence            56889999999999999999999999998764

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.86  E-value=1.1e-05  Score=55.37  Aligned_cols=33  Identities=18%  Similarity=0.199  Sum_probs=29.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|++.|++|..+
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   34 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLN   34 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEE
Confidence            456889999999999999999999999988654

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.86  E-value=1.5e-05  Score=55.20  Aligned_cols=34  Identities=24%  Similarity=0.269  Sum_probs=30.6

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++++||||+|+||++++++|+++|++|..+
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~   41 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGARVVLA   41 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            4567899999999999999999999999988654

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.86  E-value=1.3e-05  Score=55.31  Aligned_cols=34  Identities=15%  Similarity=0.128  Sum_probs=28.8

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..++++++||||+|+||++++++|+++|++|..+
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~   42 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLT   42 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEE
Confidence            3567899999999999999999999999988654

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=97.86  E-value=1.3e-05  Score=55.83  Aligned_cols=37  Identities=19%  Similarity=0.212  Sum_probs=28.0

Q ss_pred             hhhhhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          46 IQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        46 ~~~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ...+..+++++||||+|+||++++++|+++|++|..+
T Consensus        18 ~~~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~   54 (279)
T 3sju_A           18 GSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGC   54 (279)
T ss_dssp             -------CEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            3344567899999999999999999999999988654

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.86  E-value=1.5e-05  Score=54.40  Aligned_cols=33  Identities=21%  Similarity=0.286  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   37 (249)
T 2ew8_A            5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIA   37 (249)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.86  E-value=1.6e-05  Score=53.48  Aligned_cols=31  Identities=23%  Similarity=0.162  Sum_probs=28.1

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++||||+|+||++++++|+++|++|..+
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~   32 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALG   32 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            5789999999999999999999999987654

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.85  E-value=1.6e-05  Score=54.53  Aligned_cols=34  Identities=21%  Similarity=0.349  Sum_probs=30.7

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++++||||+|+||++++++|+++|++|..+
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~   42 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGATVILL   42 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence            4678999999999999999999999999988654

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.85  E-value=1.3e-05  Score=55.34  Aligned_cols=33  Identities=15%  Similarity=0.236  Sum_probs=29.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   36 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTIT   36 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            457889999999999999999999999988754

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.84  E-value=1.4e-05  Score=54.97  Aligned_cols=33  Identities=21%  Similarity=0.269  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~   59 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLT   59 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999987654

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.84  E-value=1.3e-05  Score=54.79  Aligned_cols=33  Identities=18%  Similarity=0.212  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~   36 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFS   36 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999987654

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.84  E-value=1.7e-05  Score=54.21  Aligned_cols=33  Identities=18%  Similarity=0.197  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~   37 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGAAVAIA   37 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.84  E-value=1.7e-05  Score=54.09  Aligned_cols=33  Identities=27%  Similarity=0.399  Sum_probs=29.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~   35 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVAC   35 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            456889999999999999999999999998754

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=97.83  E-value=1.7e-05  Score=54.21  Aligned_cols=33  Identities=15%  Similarity=0.311  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         5 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~   37 (250)
T 2fwm_X            5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGF   37 (250)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            456889999999999999999999999988654

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.83  E-value=1.7e-05  Score=54.04  Aligned_cols=32  Identities=25%  Similarity=0.226  Sum_probs=28.4

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++||||+|+||++++++|+++|++|..+
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~   33 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMM   33 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            35789999999999999999999999988654

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.83  E-value=1.9e-05  Score=55.46  Aligned_cols=35  Identities=17%  Similarity=0.172  Sum_probs=31.2

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+++++++||||+|+||++++++|+++|++|..+.
T Consensus        44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~   78 (291)
T 3ijr_A           44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAY   78 (291)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence            35789999999999999999999999999987653

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.83  E-value=1.3e-05  Score=54.68  Aligned_cols=34  Identities=26%  Similarity=0.273  Sum_probs=28.9

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcC---CceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCC---PQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g---~~V~~I   82 (84)
                      .+.+++++||||+|+||++++++|++.|   ++|..+
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~   54 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTT   54 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEE
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEE
Confidence            3567899999999999999999999999   777654

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.83  E-value=1.7e-05  Score=54.49  Aligned_cols=33  Identities=21%  Similarity=0.331  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   37 (262)
T 1zem_A            5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALL   37 (262)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=97.83  E-value=1.5e-05  Score=55.55  Aligned_cols=34  Identities=18%  Similarity=0.232  Sum_probs=29.6

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++++||||+|+||++++++|++.|++|..+
T Consensus        20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~   53 (288)
T 2x9g_A           20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIH   53 (288)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEE
Confidence            3677899999999999999999999999988654

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.83  E-value=1.7e-05  Score=54.52  Aligned_cols=33  Identities=24%  Similarity=0.332  Sum_probs=30.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus        11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   43 (267)
T 1iy8_A           11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLV   43 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=97.83  E-value=1.7e-05  Score=53.99  Aligned_cols=37  Identities=11%  Similarity=0.113  Sum_probs=32.0

Q ss_pred             hhhhccceEEEeccC--cchHHHHHHHHHHcCCceEEEE
Q psy8179          47 QEFYKDQTVFITGAT--GFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        47 ~~~~~~~~vlitGat--GfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ....++++++||||+  |+||++++++|+++|++|..+.
T Consensus         9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~   47 (271)
T 3ek2_A            9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTY   47 (271)
T ss_dssp             CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEE
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEe
Confidence            345678999999999  9999999999999999887653

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=97.82  E-value=1.8e-05  Score=54.22  Aligned_cols=32  Identities=19%  Similarity=0.343  Sum_probs=28.6

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++||||+|+||++++++|+++|++|..+
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~   52 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISI   52 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            35789999999999999999999999998755

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=97.82  E-value=1.9e-05  Score=54.91  Aligned_cols=33  Identities=18%  Similarity=0.239  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus        20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   52 (277)
T 2rhc_B           20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVC   52 (277)
T ss_dssp             TTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=97.82  E-value=2e-05  Score=54.60  Aligned_cols=34  Identities=18%  Similarity=0.197  Sum_probs=30.5

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++++||||+|+||++++++|+++|++|..+
T Consensus         7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~   40 (281)
T 3s55_A            7 DFEGKTALITGGARGMGRSHAVALAEAGADIAIC   40 (281)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEE
Confidence            3567899999999999999999999999998654

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.82  E-value=2.2e-05  Score=54.50  Aligned_cols=33  Identities=24%  Similarity=0.307  Sum_probs=29.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|++.|++|..+
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~   46 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLL   46 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            557899999999999999999999999998765

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.82  E-value=1.7e-05  Score=54.83  Aligned_cols=33  Identities=21%  Similarity=0.308  Sum_probs=30.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~   59 (271)
T 4iin_A           27 FTGKNVLITGASKGIGAEIAKTLASMGLKVWIN   59 (271)
T ss_dssp             CSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988754

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=97.82  E-value=1.6e-05  Score=53.87  Aligned_cols=34  Identities=18%  Similarity=0.261  Sum_probs=30.5

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++++++||||+|.||++++++|+++|++|..+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~   37 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIH   37 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEE
Confidence            4567899999999999999999999999988654

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=97.81  E-value=1.6e-05  Score=54.79  Aligned_cols=33  Identities=15%  Similarity=0.091  Sum_probs=29.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++++++||||+|+||++++++|+++|++|..+
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~   56 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVN   56 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            356789999999999999999999999998654

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=97.81  E-value=1.8e-05  Score=53.61  Aligned_cols=30  Identities=17%  Similarity=0.262  Sum_probs=27.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++||||+|+||++++++|+++|++|..+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~   31 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGI   31 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            579999999999999999999999988654

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=97.81  E-value=1.7e-05  Score=54.54  Aligned_cols=33  Identities=18%  Similarity=0.174  Sum_probs=29.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus        24 l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~   56 (267)
T 4iiu_A           24 AMSRSVLVTGASKGIGRAIARQLAADGFNIGVH   56 (267)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            466899999999999999999999999998554

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.81  E-value=2.2e-05  Score=54.04  Aligned_cols=33  Identities=12%  Similarity=0.260  Sum_probs=30.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         6 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~   38 (259)
T 3edm_A            6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLT   38 (259)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999998765

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=97.81  E-value=2.2e-05  Score=54.29  Aligned_cols=34  Identities=18%  Similarity=0.277  Sum_probs=30.5

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++++||||+|+||++++++|+++|++|..+
T Consensus        27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~   60 (281)
T 3ppi_A           27 QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIA   60 (281)
T ss_dssp             GGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            4678899999999999999999999999988654

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=97.81  E-value=1.6e-05  Score=54.88  Aligned_cols=35  Identities=20%  Similarity=0.313  Sum_probs=29.6

Q ss_pred             hhhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          48 EFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        48 ~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++.+++++||||+|+||++++++|+++|++|..+
T Consensus        21 ~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~   55 (269)
T 3gk3_A           21 SMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVS   55 (269)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEE
T ss_pred             hhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            34667899999999999999999999999998765

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=97.80  E-value=2e-05  Score=53.93  Aligned_cols=33  Identities=27%  Similarity=0.390  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~   37 (257)
T 3tpc_A            5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGL   37 (257)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999998654

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.80  E-value=2e-05  Score=53.37  Aligned_cols=31  Identities=16%  Similarity=0.274  Sum_probs=28.2

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++||||+|+||++++++|+++|++|..+
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~   32 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIA   32 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            4789999999999999999999999988654

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=97.80  E-value=1.8e-05  Score=53.24  Aligned_cols=26  Identities=23%  Similarity=0.359  Sum_probs=24.6

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      +++++||||+|+||++++++|+++|+
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~   27 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAAR   27 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcC
Confidence            47899999999999999999999998

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=97.80  E-value=2.2e-05  Score=54.52  Aligned_cols=33  Identities=18%  Similarity=0.348  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   39 (270)
T 1yde_A            7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVIC   39 (270)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999988654

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=97.80  E-value=1.7e-05  Score=54.24  Aligned_cols=33  Identities=15%  Similarity=0.286  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus        13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   45 (247)
T 1uzm_A           13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVT   45 (247)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=97.79  E-value=1.8e-05  Score=54.28  Aligned_cols=33  Identities=18%  Similarity=0.227  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|++.|++|..+
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   35 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYIT   35 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            457889999999999999999999999988654

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.79  E-value=2.1e-05  Score=54.14  Aligned_cols=33  Identities=15%  Similarity=0.312  Sum_probs=30.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   42 (256)
T 3gaf_A           10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVT   42 (256)
T ss_dssp             CTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999998654

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=97.79  E-value=2.1e-05  Score=54.43  Aligned_cols=34  Identities=18%  Similarity=0.242  Sum_probs=30.8

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+++++||||+|.||++++++|+++|++|..+
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~   41 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAV   41 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEE
Confidence            3677899999999999999999999999998765

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=97.79  E-value=2.4e-05  Score=53.95  Aligned_cols=34  Identities=12%  Similarity=0.155  Sum_probs=29.3

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+++++||||+|+||++++++|+++|++|..+
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~   51 (253)
T 2nm0_A           18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAIT   51 (253)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            3567899999999999999999999999988654

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.79  E-value=1.9e-05  Score=54.24  Aligned_cols=33  Identities=18%  Similarity=0.336  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~   36 (257)
T 3imf_A            4 MKEKVVIITGGSSGMGKGMATRFAKEGARVVIT   36 (257)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.79  E-value=2.7e-05  Score=53.36  Aligned_cols=33  Identities=6%  Similarity=0.171  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcc--hHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGF--LGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGf--iG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+  ||++++++|+++|++|..+
T Consensus         5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~   39 (266)
T 3oig_A            5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFT   39 (266)
T ss_dssp             CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEe
Confidence            46789999999999  9999999999999998655

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.78  E-value=2.3e-05  Score=54.25  Aligned_cols=33  Identities=18%  Similarity=0.379  Sum_probs=29.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~   36 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREGASLVAV   36 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            457899999999999999999999999988654

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.78  E-value=2.3e-05  Score=53.65  Aligned_cols=33  Identities=18%  Similarity=0.277  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         4 l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~   36 (247)
T 3rwb_A            4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVS   36 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.78  E-value=1.9e-05  Score=54.82  Aligned_cols=33  Identities=18%  Similarity=0.245  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   36 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTIT   36 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            457899999999999999999999999988654

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.78  E-value=2e-05  Score=54.35  Aligned_cols=33  Identities=18%  Similarity=0.265  Sum_probs=30.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus         8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~   40 (262)
T 3pk0_A            8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVA   40 (262)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.78  E-value=2.3e-05  Score=54.25  Aligned_cols=33  Identities=24%  Similarity=0.353  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|++.|++|..+
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~   51 (273)
T 1ae1_A           19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTC   51 (273)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999988654

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.78  E-value=2.4e-05  Score=54.69  Aligned_cols=33  Identities=12%  Similarity=0.192  Sum_probs=30.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus        25 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~   57 (277)
T 4dqx_A           25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVA   57 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=97.78  E-value=2.5e-05  Score=53.28  Aligned_cols=33  Identities=15%  Similarity=0.309  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         7 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~   39 (261)
T 3n74_A            7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIV   39 (261)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999987654

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.78  E-value=2.1e-05  Score=54.59  Aligned_cols=33  Identities=18%  Similarity=0.263  Sum_probs=30.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|++.|++|..+
T Consensus        26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~   58 (269)
T 4dmm_A           26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVN   58 (269)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999998654

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.78  E-value=3.1e-05  Score=53.78  Aligned_cols=33  Identities=18%  Similarity=0.200  Sum_probs=30.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus        27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   59 (283)
T 1g0o_A           27 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVN   59 (283)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.77  E-value=2.4e-05  Score=54.54  Aligned_cols=33  Identities=15%  Similarity=0.361  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|++.|++|..+
T Consensus        27 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~   59 (276)
T 2b4q_A           27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFIC   59 (276)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999987654

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.77  E-value=2.7e-05  Score=54.39  Aligned_cols=33  Identities=18%  Similarity=0.197  Sum_probs=30.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus        30 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~   62 (276)
T 3r1i_A           30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVA   62 (276)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.77  E-value=2e-05  Score=54.86  Aligned_cols=34  Identities=21%  Similarity=0.275  Sum_probs=30.5

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++++||||+|+||++++++|+++|++|..+
T Consensus        25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~   58 (270)
T 3ftp_A           25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGT   58 (270)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            3567899999999999999999999999988654

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=97.77  E-value=2.3e-05  Score=54.44  Aligned_cols=34  Identities=18%  Similarity=0.247  Sum_probs=30.7

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++++||||+|.||++++++|++.|++|..+
T Consensus         8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~   41 (286)
T 3uve_A            8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAV   41 (286)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEE
Confidence            3568999999999999999999999999998754

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=97.77  E-value=3.1e-05  Score=53.02  Aligned_cols=34  Identities=24%  Similarity=0.337  Sum_probs=30.1

Q ss_pred             hhccceEEEeccCcc-hHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGF-LGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGf-iG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++++||||+|+ ||++++++|+++|++|..+
T Consensus        19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~   53 (266)
T 3o38_A           19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVIS   53 (266)
T ss_dssp             TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEe
Confidence            367889999999996 9999999999999988654

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.77  E-value=2.5e-05  Score=54.13  Aligned_cols=34  Identities=21%  Similarity=0.220  Sum_probs=30.7

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++++||||+|+||++++++|+++|++|..+
T Consensus        12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~   45 (280)
T 3pgx_A           12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIAC   45 (280)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            3678899999999999999999999999998654

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.77  E-value=3e-05  Score=53.40  Aligned_cols=33  Identities=21%  Similarity=0.358  Sum_probs=30.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~   38 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLT   38 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.76  E-value=2.4e-05  Score=55.12  Aligned_cols=33  Identities=12%  Similarity=0.264  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~   61 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLS   61 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999987654

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=97.76  E-value=1.9e-05  Score=54.91  Aligned_cols=33  Identities=15%  Similarity=0.344  Sum_probs=29.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||+++++.|++.|++|..+
T Consensus        42 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~   74 (285)
T 2c07_A           42 GENKVALVTGAGRGIGREIAKMLAKSVSHVICI   74 (285)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEE
Confidence            457899999999999999999999999987653

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=97.76  E-value=2.5e-05  Score=54.54  Aligned_cols=34  Identities=21%  Similarity=0.251  Sum_probs=30.1

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+++++||||+|+||++++++|++.|++|..+
T Consensus        22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~   55 (281)
T 3v2h_A           22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLN   55 (281)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            3567899999999999999999999999988654

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.76  E-value=1.9e-05  Score=55.78  Aligned_cols=33  Identities=18%  Similarity=0.266  Sum_probs=30.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|++.|++|..+
T Consensus        39 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~   71 (293)
T 3rih_A           39 LSARSVLVTGGTKGIGRGIATVFARAGANVAVA   71 (293)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988754

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.76  E-value=2.7e-05  Score=53.52  Aligned_cols=33  Identities=18%  Similarity=0.279  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~   37 (252)
T 3h7a_A            5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAG   37 (252)
T ss_dssp             CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999988654

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=97.76  E-value=2.6e-05  Score=53.34  Aligned_cols=33  Identities=27%  Similarity=0.412  Sum_probs=28.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++.++||||+|+||++++++|+++|++|..+
T Consensus         7 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~   39 (257)
T 3tl3_A            7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVL   39 (257)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHHTCEEEEE
T ss_pred             ecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999998765

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.75  E-value=2.9e-05  Score=54.10  Aligned_cols=33  Identities=21%  Similarity=0.328  Sum_probs=30.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~   61 (273)
T 3uf0_A           29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAW   61 (273)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.75  E-value=2.2e-05  Score=54.53  Aligned_cols=33  Identities=18%  Similarity=0.184  Sum_probs=30.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus        25 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~   57 (266)
T 3grp_A           25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLH   57 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.75  E-value=2.9e-05  Score=54.04  Aligned_cols=33  Identities=18%  Similarity=0.280  Sum_probs=30.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~   61 (271)
T 3v2g_A           29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALT   61 (271)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999998765

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.75  E-value=2.5e-05  Score=54.84  Aligned_cols=33  Identities=18%  Similarity=0.190  Sum_probs=30.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus        47 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~   79 (294)
T 3r3s_A           47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAIN   79 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999998754

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.75  E-value=2.7e-05  Score=53.35  Aligned_cols=33  Identities=18%  Similarity=0.323  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~   39 (248)
T 3op4_A            7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGT   39 (248)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999998654

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=97.74  E-value=1.8e-05  Score=54.99  Aligned_cols=32  Identities=22%  Similarity=0.426  Sum_probs=29.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      +.+++++||||+|+||++++++|+++|++|..
T Consensus        26 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~   57 (266)
T 3uxy_A           26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAV   57 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE
Confidence            56789999999999999999999999998764

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.74  E-value=2.9e-05  Score=53.12  Aligned_cols=31  Identities=16%  Similarity=0.208  Sum_probs=28.1

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++||||+|+||++++++|+++|++|..+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   32 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIA   32 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            4689999999999999999999999988654

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.74  E-value=2.6e-05  Score=53.87  Aligned_cols=33  Identities=24%  Similarity=0.342  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~   40 (267)
T 3t4x_A            8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLIN   40 (267)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999988754

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=97.74  E-value=3.1e-05  Score=53.81  Aligned_cols=34  Identities=24%  Similarity=0.364  Sum_probs=30.7

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++++||||+|+||++++++|+++|++|..+
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~   57 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIA   57 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEE
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            3678999999999999999999999999988654

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=97.74  E-value=2.6e-05  Score=55.93  Aligned_cols=33  Identities=24%  Similarity=0.348  Sum_probs=28.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|...
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~   35 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYAS   35 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEe
Confidence            346789999999999999999999999998653

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.74  E-value=2.3e-05  Score=54.61  Aligned_cols=33  Identities=27%  Similarity=0.353  Sum_probs=29.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|.||++++++|++.|++|..+
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~   34 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLG   34 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEE
Confidence            456889999999999999999999999988654

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=97.73  E-value=3.3e-05  Score=53.91  Aligned_cols=33  Identities=12%  Similarity=0.061  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~   59 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAIT   59 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEE
Confidence            456889999999999999999999999998765

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=97.73  E-value=2.8e-05  Score=53.08  Aligned_cols=32  Identities=28%  Similarity=0.171  Sum_probs=29.0

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++||||+|+||++++++|+++|++|..+
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~   37 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVT   37 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEE
Confidence            35789999999999999999999999998765

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.72  E-value=2.9e-05  Score=53.66  Aligned_cols=34  Identities=15%  Similarity=0.187  Sum_probs=30.7

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++++||||+|+||++++++|++.|++|..+
T Consensus        15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~   48 (270)
T 3is3_A           15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVN   48 (270)
T ss_dssp             CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            3667899999999999999999999999998764

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=97.72  E-value=2.1e-05  Score=56.27  Aligned_cols=26  Identities=27%  Similarity=0.277  Sum_probs=23.6

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      .++|+||||+||||++++..|+..|+
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~   29 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEM   29 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC
Confidence            35799999999999999999999875

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.72  E-value=2.8e-05  Score=53.70  Aligned_cols=33  Identities=18%  Similarity=0.264  Sum_probs=30.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus        18 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~   50 (266)
T 4egf_A           18 LDGKRALITGATKGIGADIARAFAAAGARLVLS   50 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.72  E-value=3.2e-05  Score=52.95  Aligned_cols=31  Identities=19%  Similarity=0.189  Sum_probs=28.2

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++||||+|+||++++++|++.|++|..+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   32 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVA   32 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            4789999999999999999999999988654

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.71  E-value=2.8e-05  Score=54.42  Aligned_cols=34  Identities=18%  Similarity=0.176  Sum_probs=30.3

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+++++||||+|+||++++++|+++|++|..+
T Consensus        26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~   59 (277)
T 3gvc_A           26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCA   59 (277)
T ss_dssp             -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            3678899999999999999999999999988654

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.71  E-value=2.7e-05  Score=54.89  Aligned_cols=33  Identities=18%  Similarity=0.247  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|++.|++|..+
T Consensus        24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~   56 (297)
T 1xhl_A           24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTIT   56 (297)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999988654

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.71  E-value=3.7e-05  Score=53.44  Aligned_cols=33  Identities=15%  Similarity=0.196  Sum_probs=28.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++++++||||+|+||++++++|+++|++|..+
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~   57 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVIN   57 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            457899999999999999999999999998754

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.70  E-value=3.5e-05  Score=52.91  Aligned_cols=33  Identities=18%  Similarity=0.239  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~   37 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLI   37 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            457899999999999999999999999988654

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=97.70  E-value=1.9e-05  Score=53.01  Aligned_cols=33  Identities=15%  Similarity=0.119  Sum_probs=28.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~   36 (223)
T 3uce_A            4 SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVA   36 (223)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEe
Confidence            457889999999999999999999999887654

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=97.70  E-value=3.9e-05  Score=53.51  Aligned_cols=33  Identities=24%  Similarity=0.393  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~   35 (281)
T 3zv4_A            3 LTGEVALITGGASGLGRALVDRFVAEGARVAVL   35 (281)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEE
Confidence            457899999999999999999999999988654

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.69  E-value=3e-05  Score=54.23  Aligned_cols=33  Identities=12%  Similarity=0.076  Sum_probs=28.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|++.|++|..+
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~   63 (281)
T 4dry_A           31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVVIT   63 (281)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.68  E-value=3.3e-05  Score=53.90  Aligned_cols=34  Identities=24%  Similarity=0.297  Sum_probs=28.4

Q ss_pred             hhhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          48 EFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        48 ~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..++ ++++||||+|+||++++++|++.|++|..+
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~   51 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLT   51 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEE
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            3355 789999999999999999999999988654

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.68  E-value=4.6e-05  Score=52.31  Aligned_cols=33  Identities=18%  Similarity=0.239  Sum_probs=29.7

Q ss_pred             hccceEEEeccC--cchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGAT--GFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGat--GfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+  |+||++++++|+++|++|..+
T Consensus         6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~   40 (261)
T 2wyu_A            6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALS   40 (261)
T ss_dssp             CTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEE
Confidence            457889999999  999999999999999998754

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=97.68  E-value=2.8e-05  Score=52.96  Aligned_cols=31  Identities=23%  Similarity=0.179  Sum_probs=27.5

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++||||+|+||++++++|+++|++|..+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   31 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCH   31 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEe
Confidence            3689999999999999999999999987654

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=97.67  E-value=3.8e-05  Score=51.65  Aligned_cols=30  Identities=23%  Similarity=0.135  Sum_probs=26.9

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++||||+|+||++++++|+++|++|..+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~   31 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLT   31 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEE
Confidence            569999999999999999999999998654

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.67  E-value=2.6e-05  Score=54.32  Aligned_cols=33  Identities=24%  Similarity=0.301  Sum_probs=29.7

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      .+++++++||||+|+||++++++|+++|++|..
T Consensus        23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~   55 (271)
T 4ibo_A           23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILI   55 (271)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE
Confidence            356899999999999999999999999998764

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=97.67  E-value=3.7e-05  Score=54.04  Aligned_cols=34  Identities=24%  Similarity=0.262  Sum_probs=30.8

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++++||||+|.||++++++|++.|++|..+
T Consensus        25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~   58 (299)
T 3t7c_A           25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAI   58 (299)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            4678999999999999999999999999998764

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.66  E-value=5e-05  Score=52.33  Aligned_cols=33  Identities=21%  Similarity=0.254  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.++.++||||+|.||++++++|+++|++|..+
T Consensus         6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~   38 (265)
T 3lf2_A            6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFC   38 (265)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999988654

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=97.66  E-value=2.9e-05  Score=54.37  Aligned_cols=33  Identities=15%  Similarity=0.204  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|++.|++|..+
T Consensus         6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~   38 (280)
T 3tox_A            6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVT   38 (280)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999987643

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.66  E-value=3.9e-05  Score=53.01  Aligned_cols=33  Identities=18%  Similarity=0.284  Sum_probs=30.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|.||++++++|+++|++|..+
T Consensus         9 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~   41 (262)
T 3ksu_A            9 LKNKVIVIAGGIKNLGALTAKTFALESVNLVLH   41 (262)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999998765

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=97.66  E-value=5.1e-05  Score=52.10  Aligned_cols=33  Identities=9%  Similarity=0.139  Sum_probs=29.6

Q ss_pred             hccceEEEeccC--cchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGAT--GFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGat--GfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+  |+||++++++|+++|++|..+
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~   41 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFT   41 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEE
Confidence            456889999999  999999999999999998754

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=97.65  E-value=3.3e-05  Score=54.83  Aligned_cols=34  Identities=18%  Similarity=0.196  Sum_probs=30.7

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++++||||+|+||++++++|++.|++|..+
T Consensus        24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~   57 (322)
T 3qlj_A           24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVN   57 (322)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            3577899999999999999999999999988764

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.65  E-value=4e-05  Score=54.45  Aligned_cols=34  Identities=21%  Similarity=0.275  Sum_probs=30.7

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++++||||+|+||+++++.|++.|++|..+
T Consensus        43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~   76 (317)
T 3oec_A           43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAI   76 (317)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEE
Confidence            3567899999999999999999999999998765

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=97.65  E-value=5.4e-05  Score=52.56  Aligned_cols=33  Identities=12%  Similarity=0.155  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcc--hHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGF--LGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGf--iG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+  ||++++++|+++|++|..+
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~   58 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFT   58 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEe
Confidence            56789999999988  9999999999999988765

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.64  E-value=5.5e-05  Score=52.46  Aligned_cols=33  Identities=24%  Similarity=0.286  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|.||++++++|+++|++|..+
T Consensus         4 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~   36 (274)
T 3e03_A            4 LSGKTLFITGASRGIGLAIALRAARDGANVAIA   36 (274)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999988654

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.64  E-value=3.9e-05  Score=53.51  Aligned_cols=33  Identities=15%  Similarity=0.084  Sum_probs=28.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||++++++|+++|++|..+
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~   58 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALA   58 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            457889999999999999999999999988654

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.64  E-value=4.5e-05  Score=53.19  Aligned_cols=34  Identities=18%  Similarity=0.288  Sum_probs=30.6

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++++||||+|.||++++++|+++|++|..+
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~   63 (275)
T 4imr_A           30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILH   63 (275)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            3578999999999999999999999999988654

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.63  E-value=6e-05  Score=52.08  Aligned_cols=33  Identities=9%  Similarity=0.072  Sum_probs=29.7

Q ss_pred             hccceEEEeccC--cchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGAT--GFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGat--GfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+  |+||++++++|+++|++|..+
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~   38 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFT   38 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEE
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEE
Confidence            457899999999  999999999999999998765

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=97.62  E-value=5.6e-05  Score=52.78  Aligned_cols=33  Identities=15%  Similarity=0.326  Sum_probs=30.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|.||++++++|+++|++|..+
T Consensus         7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~   39 (285)
T 3sc4_A            7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALV   39 (285)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999988654

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.61  E-value=7.2e-05  Score=52.58  Aligned_cols=34  Identities=6%  Similarity=0.053  Sum_probs=30.5

Q ss_pred             hhccceEEEeccCcc--hHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGF--LGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGf--iG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++++||||+|+  ||++++++|++.|++|..+
T Consensus        28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~   63 (293)
T 3grk_A           28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFT   63 (293)
T ss_dssp             TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEE
Confidence            367889999999999  9999999999999998655

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=97.61  E-value=5.3e-05  Score=53.04  Aligned_cols=34  Identities=21%  Similarity=0.082  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++++++||||+|.||++++++|+++|++|..+.
T Consensus         7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~   40 (291)
T 1e7w_A            7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHY   40 (291)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEc
Confidence            5678999999999999999999999999887653

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.60  E-value=6.8e-05  Score=52.46  Aligned_cols=33  Identities=21%  Similarity=0.111  Sum_probs=29.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.++.++||||+|+||++++++|++.|++|..+
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~   58 (283)
T 3v8b_A           26 QPSPVALITGAGSGIGRATALALAADGVTVGAL   58 (283)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            456889999999999999999999999988654

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.60  E-value=6.8e-05  Score=52.07  Aligned_cols=33  Identities=15%  Similarity=0.166  Sum_probs=29.8

Q ss_pred             hccceEEEeccC--cchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGAT--GFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGat--GfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+  |+||++++++|+++|++|..+
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~   53 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFT   53 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEE
Confidence            567899999999  999999999999999998764

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=97.59  E-value=4.6e-05  Score=51.65  Aligned_cols=32  Identities=34%  Similarity=0.450  Sum_probs=25.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|.+ |+.|..+
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~   34 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYAL   34 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEE
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEE
Confidence            4578899999999999999999988 7776543

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=97.59  E-value=5.3e-05  Score=51.93  Aligned_cols=30  Identities=20%  Similarity=0.400  Sum_probs=27.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+++||||+|+||++++++|+++|++|..+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~   30 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIAT   30 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            479999999999999999999999988654

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=97.59  E-value=5.7e-05  Score=54.04  Aligned_cols=33  Identities=21%  Similarity=0.102  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|+||+++++.|++.|++|..+
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~   76 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLH   76 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            567899999999999999999999999998765

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.58  E-value=4.5e-05  Score=52.18  Aligned_cols=29  Identities=17%  Similarity=0.118  Sum_probs=26.7

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      ++++||||+|+||++++++|+++|++|..
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~   30 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVAC   30 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEE
Confidence            57999999999999999999999998764

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.56  E-value=0.00011  Score=51.67  Aligned_cols=34  Identities=9%  Similarity=0.010  Sum_probs=30.4

Q ss_pred             hccceEEEeccCc--chHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATG--FLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatG--fiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++++++||||+|  +||++++++|++.|++|..+.
T Consensus        28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~   63 (296)
T 3k31_A           28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTY   63 (296)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEE
T ss_pred             cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEe
Confidence            5678999999997  999999999999999987653

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=97.56  E-value=5.6e-05  Score=54.06  Aligned_cols=32  Identities=25%  Similarity=0.270  Sum_probs=28.6

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++++||||+|+||++++++|+++|++|..+.
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~   33 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVY   33 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEE
Confidence            57899999999999999999999999876653

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=97.55  E-value=5.9e-05  Score=51.52  Aligned_cols=33  Identities=27%  Similarity=0.244  Sum_probs=29.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHH---cCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLR---CCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~---~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|++   .|++|..+
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~   39 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVS   39 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEE
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEE
Confidence            4578899999999999999999999   89988654

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=97.54  E-value=6.3e-05  Score=53.80  Aligned_cols=33  Identities=21%  Similarity=0.291  Sum_probs=29.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+|+||++++++|+++|++|..+
T Consensus         7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~   39 (319)
T 1gz6_A            7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVN   39 (319)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            467899999999999999999999999988653

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.52  E-value=8.2e-05  Score=53.96  Aligned_cols=34  Identities=26%  Similarity=0.264  Sum_probs=30.6

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++++||||+|.||++++++|+++|++|..+
T Consensus        42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~   75 (346)
T 3kvo_A           42 RLAGCTVFITGASRGIGKAIALKAAKDGANIVIA   75 (346)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEE
T ss_pred             CCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEE
Confidence            3578999999999999999999999999988654

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=97.47  E-value=0.00013  Score=50.82  Aligned_cols=33  Identities=18%  Similarity=0.269  Sum_probs=29.6

Q ss_pred             hccceEEEeccC--cchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGAT--GFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGat--GfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+  |+||++++++|++.|++|..+
T Consensus         6 l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~   40 (297)
T 1d7o_A            6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVG   40 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEe
Confidence            457899999999  999999999999999988654

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.45  E-value=0.00014  Score=50.02  Aligned_cols=33  Identities=6%  Similarity=0.129  Sum_probs=29.6

Q ss_pred             hccceEEEecc--CcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGA--TGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGa--tGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||  +|+||++++++|++.|++|..+
T Consensus         5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~   39 (269)
T 2h7i_A            5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLT   39 (269)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEE
Confidence            45789999999  9999999999999999988654

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=97.40  E-value=8.7e-05  Score=48.49  Aligned_cols=27  Identities=41%  Similarity=0.503  Sum_probs=23.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      |+++||||+|++|++++++|+++  +|..
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~   27 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLL   27 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEE
Confidence            47999999999999999999987  5543

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=97.39  E-value=0.00017  Score=49.16  Aligned_cols=33  Identities=18%  Similarity=0.136  Sum_probs=29.8

Q ss_pred             hccceEEEeccC--cchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGAT--GFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGat--GfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||+  |.||++++++|++.|++|..+
T Consensus        18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~   52 (267)
T 3gdg_A           18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAIT   52 (267)
T ss_dssp             CTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEEC
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEE
Confidence            578999999999  999999999999999988654

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=97.36  E-value=0.00012  Score=49.67  Aligned_cols=31  Identities=23%  Similarity=0.322  Sum_probs=26.8

Q ss_pred             ccceEEEeccCcchHHHHHHHHHH-cCCceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLR-CCPQMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~-~g~~V~~   81 (84)
                      ++++++||||+|+||++++++|++ .|+.|..
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~   34 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVIN   34 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEE
Confidence            457899999999999999999999 6776654

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=97.32  E-value=0.00016  Score=50.75  Aligned_cols=34  Identities=26%  Similarity=0.362  Sum_probs=29.2

Q ss_pred             hhhccceEEEeccCcchHHHHHHHHHHcCC---ceEE
Q psy8179          48 EFYKDQTVFITGATGFLGSLLVEKLLRCCP---QMLS   81 (84)
Q Consensus        48 ~~~~~~~vlitGatGfiG~~l~~~ll~~g~---~V~~   81 (84)
                      ..+.+++++||||+|.||++++++|++.|+   +|..
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~   65 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLIL   65 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEE
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEE
Confidence            346789999999999999999999999887   5543

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.31  E-value=0.00021  Score=42.61  Aligned_cols=30  Identities=17%  Similarity=0.285  Sum_probs=25.8

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcC-CceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCC-PQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g-~~V~~I   82 (84)
                      .++|+|+|+ |++|+.+++.|.+.| ++|..+
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~   35 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVA   35 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEE
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEE
Confidence            468999999 999999999999998 776543

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=97.29  E-value=0.00028  Score=49.79  Aligned_cols=33  Identities=18%  Similarity=0.244  Sum_probs=29.7

Q ss_pred             hccceEEEecc--CcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGA--TGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGa--tGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++++||||  +|.||++++++|++.|++|..+
T Consensus         7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~   41 (315)
T 2o2s_A            7 LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALG   41 (315)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEE
T ss_pred             CCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEE
Confidence            46789999999  8999999999999999998764

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=97.24  E-value=0.00032  Score=49.43  Aligned_cols=33  Identities=18%  Similarity=0.271  Sum_probs=29.5

Q ss_pred             hccceEEEecc--CcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGA--TGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGa--tGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++.++||||  +|.||++++++|++.|++|..+
T Consensus         7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~   41 (319)
T 2ptg_A            7 LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVG   41 (319)
T ss_dssp             CTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEE
Confidence            45788999999  8999999999999999988654

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=97.24  E-value=0.00024  Score=48.61  Aligned_cols=27  Identities=19%  Similarity=0.375  Sum_probs=24.2

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCc
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQ   78 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~   78 (84)
                      +++++||||+|+||++++++|++.|+.
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~   28 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKD   28 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSS
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCC
Confidence            478999999999999999999998643

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=97.17  E-value=0.00046  Score=48.48  Aligned_cols=33  Identities=24%  Similarity=0.463  Sum_probs=30.0

Q ss_pred             ccceEEEecc----------------CcchHHHHHHHHHHcCCceEEEE
Q psy8179          51 KDQTVFITGA----------------TGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        51 ~~~~vlitGa----------------tGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+++|+||||                +|.+|..+++.+.+.|++|..++
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~   50 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLIT   50 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence            4689999999                99999999999999999998775

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=97.08  E-value=0.00053  Score=51.86  Aligned_cols=32  Identities=31%  Similarity=0.375  Sum_probs=27.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCc-eEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQ-MLS   81 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~-V~~   81 (84)
                      -.+++++||||+|+||.+++++|.++|++ |..
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl  256 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLL  256 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEE
Confidence            35688999999999999999999999986 543

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.06  E-value=0.00074  Score=47.39  Aligned_cols=35  Identities=20%  Similarity=0.429  Sum_probs=31.8

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+.+|+++||||++=||+.++++|.+.|++|....
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~   42 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALG   42 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence            46899999999999999999999999999987654

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=97.03  E-value=0.00078  Score=47.09  Aligned_cols=34  Identities=18%  Similarity=0.260  Sum_probs=31.0

Q ss_pred             hccceEEEecc----------------CcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGA----------------TGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGa----------------tGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.+++++||||                +|.+|..+++.|.+.|++|..++
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~   55 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVS   55 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEE
Confidence            57899999999                79999999999999999998764

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=97.01  E-value=0.00071  Score=47.37  Aligned_cols=33  Identities=15%  Similarity=0.117  Sum_probs=28.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|.+|+.++..|.+.|++|..+
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~  149 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLC  149 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEE
Confidence            467899999999999999999999999886543

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=97.00  E-value=0.00082  Score=50.48  Aligned_cols=34  Identities=18%  Similarity=0.290  Sum_probs=30.1

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+++++||||+|.||.+++++|.++|++|..+
T Consensus       210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~  243 (454)
T 3u0b_A          210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAI  243 (454)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEE
Confidence            3567899999999999999999999999987654

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=96.95  E-value=0.00082  Score=47.15  Aligned_cols=34  Identities=24%  Similarity=0.261  Sum_probs=30.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|+++||||++=||+.++++|.+.|++|....
T Consensus         9 L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~   42 (261)
T 4h15_A            9 LRGKRALITAGTKGAGAATVSLFLELGAQVLTTA   42 (261)
T ss_dssp             CTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEE
Confidence            5789999999999999999999999999987653

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=96.94  E-value=0.00095  Score=50.93  Aligned_cols=29  Identities=31%  Similarity=0.413  Sum_probs=26.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCc
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQ   78 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~   78 (84)
                      -.+++++||||+|+||.+++++|.++|++
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~  285 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAE  285 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCc
Confidence            34688999999999999999999999985

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.92  E-value=0.0012  Score=45.57  Aligned_cols=34  Identities=12%  Similarity=0.098  Sum_probs=30.1

Q ss_pred             hccceEEEeccCc--chHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATG--FLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatG--fiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|+++||||+|  =||..++++|.+.|++|..++
T Consensus         4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~   39 (256)
T 4fs3_A            4 LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTY   39 (256)
T ss_dssp             CTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEE
Confidence            5789999999886  699999999999999987654

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=96.92  E-value=0.0011  Score=46.46  Aligned_cols=32  Identities=16%  Similarity=0.271  Sum_probs=29.2

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +|+++||||++=||+.++++|++.|++|..++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~   33 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFID   33 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEe
Confidence            37899999999999999999999999987654

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=96.91  E-value=0.00049  Score=53.37  Aligned_cols=35  Identities=17%  Similarity=0.134  Sum_probs=31.1

Q ss_pred             hhhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          48 EFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        48 ~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..++++.++||||+|.||++++++|+++|++|..+
T Consensus        15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~   49 (613)
T 3oml_A           15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVN   49 (613)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            34678999999999999999999999999988653

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.86  E-value=0.0015  Score=45.90  Aligned_cols=35  Identities=20%  Similarity=0.300  Sum_probs=31.4

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+++|.++||||++=||+.+++.|.+.|.+|..+.
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~   38 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVE   38 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEE
Confidence            46789999999999999999999999999887653

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=96.83  E-value=0.0014  Score=46.56  Aligned_cols=35  Identities=17%  Similarity=0.192  Sum_probs=31.4

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+++|.++||||++=||+.+++.|.+.|.+|..+.
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~   60 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITG   60 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEE
Confidence            46789999999999999999999999999987653

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=96.76  E-value=0.00087  Score=47.15  Aligned_cols=33  Identities=21%  Similarity=0.254  Sum_probs=30.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++|.++||||++=||+.++++|.+.|.+|...
T Consensus         7 L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~   39 (255)
T 4g81_D            7 LTGKTALVTGSARGLGFAYAEGLAAAGARVILN   39 (255)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            578999999999999999999999999988654

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=96.74  E-value=0.0016  Score=40.44  Aligned_cols=30  Identities=20%  Similarity=0.267  Sum_probs=26.5

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++++|+|+ |++|+++++.|.+.|++|..+
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~i   35 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAV   35 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEE
Confidence            457999998 999999999999999998765

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.74  E-value=0.0018  Score=39.45  Aligned_cols=30  Identities=20%  Similarity=0.313  Sum_probs=25.5

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++|+|+|+ |++|+.+++.|.+.|++|..+
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~   33 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLI   33 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEE
Confidence            467999986 999999999999999887654

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=96.69  E-value=0.002  Score=45.15  Aligned_cols=34  Identities=18%  Similarity=0.275  Sum_probs=30.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|.++||||++=||+.+++.|.+.|.+|..+.
T Consensus         5 L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~   38 (258)
T 4gkb_A            5 LQDKVVIVTGGASGIGGAISMRLAEERAIPVVFA   38 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEE
Confidence            5789999999999999999999999999887653

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=96.67  E-value=0.0018  Score=39.58  Aligned_cols=31  Identities=26%  Similarity=0.479  Sum_probs=26.4

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..++++|+|+ |.+|+.+++.|.+.|++|..+
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~   35 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAV   35 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEE
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEE
Confidence            3467999998 999999999999999887654

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=96.55  E-value=0.0027  Score=48.42  Aligned_cols=28  Identities=25%  Similarity=0.395  Sum_probs=25.4

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCce
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQM   79 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V   79 (84)
                      +++++||||+|.||.+++++|.++|++.
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~  266 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAH  266 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSE
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcE
Confidence            3789999999999999999999999843

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=96.55  E-value=0.002  Score=46.44  Aligned_cols=30  Identities=23%  Similarity=0.130  Sum_probs=24.9

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcC--CceEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCC--PQMLS   81 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g--~~V~~   81 (84)
                      .++|.|+||+||+|+.++..|+.++  ++|..
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l   39 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHL   39 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEE
Confidence            3679999999999999999998886  44443

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.53  E-value=0.0024  Score=44.96  Aligned_cols=34  Identities=18%  Similarity=0.273  Sum_probs=31.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|.++||||++=||+.+++.|.+.|.+|...+
T Consensus         7 L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~   40 (247)
T 4hp8_A            7 LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAA   40 (247)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEe
Confidence            6789999999999999999999999999987653

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=96.53  E-value=0.0023  Score=48.88  Aligned_cols=33  Identities=30%  Similarity=0.256  Sum_probs=28.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      -.+++++||||+|.||.+++++|.++|+++..+
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl  281 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLL  281 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEE
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEE
Confidence            356889999999999999999999999885443

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=96.51  E-value=0.0031  Score=39.94  Aligned_cols=30  Identities=10%  Similarity=0.148  Sum_probs=26.2

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++++|+|+ |.+|+++++.|.+.|++|..|
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vi   32 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVI   32 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEE
Confidence            356899985 999999999999999998765

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=96.49  E-value=0.0021  Score=46.30  Aligned_cols=26  Identities=23%  Similarity=0.183  Sum_probs=23.2

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      .++|+||||+||+|++++..|+..+.
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~   30 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDM   30 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCC
Confidence            36899999999999999999998764

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=96.49  E-value=0.0036  Score=44.39  Aligned_cols=32  Identities=16%  Similarity=0.185  Sum_probs=27.6

Q ss_pred             ccceEEEeccCc--chHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATG--FLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatG--fiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++.++||||++  -||.+++++|+++|++|...
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~   34 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFG   34 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEE
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEE
Confidence            357899999875  89999999999999988743

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.36  E-value=0.0036  Score=41.27  Aligned_cols=30  Identities=27%  Similarity=0.262  Sum_probs=26.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|.|+||+|++|+.++..|.+.|++|..+
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~   30 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVG   30 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEE
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEE
Confidence            468999999999999999999999887643

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=96.33  E-value=0.0031  Score=45.06  Aligned_cols=25  Identities=32%  Similarity=0.222  Sum_probs=22.5

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      ++|+||||+||+|++++..|+..+.
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~   25 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPF   25 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTT
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCC
Confidence            4699999999999999999998765

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=96.01  E-value=0.0062  Score=43.36  Aligned_cols=25  Identities=20%  Similarity=0.150  Sum_probs=22.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      ++|.|+||+||+|++++..|+..+.
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~   25 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDI   25 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCC
Confidence            4799999999999999999988765

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=95.85  E-value=0.011  Score=37.42  Aligned_cols=32  Identities=25%  Similarity=0.350  Sum_probs=27.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..+++|+|.|+ |.+|+.+++.|.+.|++|..+
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vi   48 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVV   48 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEE
Confidence            44578999985 999999999999999887654

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=95.85  E-value=0.0077  Score=44.13  Aligned_cols=32  Identities=28%  Similarity=0.429  Sum_probs=25.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +...+|.|.||+|++|+.+++.|.++ +++..+
T Consensus        14 M~~~kV~IiGAtG~iG~~llr~L~~~-p~~elv   45 (359)
T 1xyg_A           14 EKDIRIGLLGASGYTGAEIVRLLANH-PHFQVT   45 (359)
T ss_dssp             -CCEEEEEECCSSHHHHHHHHHHHTC-SSEEEE
T ss_pred             ccCcEEEEECcCCHHHHHHHHHHHcC-CCcEEE
Confidence            34468999999999999999999886 555433

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=95.69  E-value=0.01  Score=39.50  Aligned_cols=29  Identities=17%  Similarity=0.172  Sum_probs=25.9

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|+|+|+ |.+|+++++.|.+.|++|..+
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vi   29 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVII   29 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEE
Confidence            46899996 999999999999999998765

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=95.62  E-value=0.011  Score=38.42  Aligned_cols=32  Identities=22%  Similarity=0.203  Sum_probs=27.8

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++|+|+||+|-+|..+++.+...|.+|..+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~   69 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTT   69 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEE
Confidence            45789999999999999999999999877654

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=95.51  E-value=0.014  Score=43.83  Aligned_cols=30  Identities=17%  Similarity=0.327  Sum_probs=25.6

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      ++++|+|+| +|++|+++++.|.+.|++|..
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v   31 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTV   31 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEE
Confidence            357899997 899999999999998887654

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=95.36  E-value=0.0076  Score=43.82  Aligned_cols=26  Identities=35%  Similarity=0.275  Sum_probs=22.5

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCc
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQ   78 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~   78 (84)
                      ++|.|.||||++|+.+++.|.++++.
T Consensus         7 ~kV~IiGAtG~iG~~llr~L~~~~~~   32 (340)
T 2hjs_A            7 LNVAVVGATGSVGEALVGLLDERDFP   32 (340)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCC
Confidence            57999999999999999999865543

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=95.33  E-value=0.016  Score=50.70  Aligned_cols=33  Identities=18%  Similarity=0.383  Sum_probs=29.4

Q ss_pred             hccceEEEeccCcc-hHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGF-LGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGf-iG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++++||||+|. ||.+++++|++.|++|..+
T Consensus       650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~  683 (1878)
T 2uv9_A          650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVT  683 (1878)
T ss_dssp             CTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            45689999999999 9999999999999987654

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=95.24  E-value=0.017  Score=42.74  Aligned_cols=27  Identities=30%  Similarity=0.440  Sum_probs=23.0

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCce
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQM   79 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V   79 (84)
                      .+|.|.|||||+|..+++.|.++++..
T Consensus         3 ~kVaIvGATG~vG~eLlrlL~~~~~p~   29 (366)
T 3pwk_A            3 YTVAVVGATGAVGAQMIKMLEESTLPI   29 (366)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCCCE
T ss_pred             cEEEEECCCChHHHHHHHHHhcCCCCc
Confidence            479999999999999999888865443

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=95.22  E-value=0.019  Score=41.59  Aligned_cols=28  Identities=36%  Similarity=0.338  Sum_probs=23.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcC-CceE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCC-PQML   80 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g-~~V~   80 (84)
                      ++|.|.||||++|+.+++.|.+++ +.+.
T Consensus         4 ~kV~I~GAtG~iG~~llr~L~~~~~p~~e   32 (336)
T 2r00_A            4 FNVAIFGATGAVGETMLEVLQEREFPVDE   32 (336)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTCCEEE
T ss_pred             cEEEEECCCCHHHHHHHHHHhcCCCCCEE
Confidence            579999999999999999998864 4443

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=95.19  E-value=0.015  Score=50.36  Aligned_cols=33  Identities=30%  Similarity=0.470  Sum_probs=29.3

Q ss_pred             hccceEEEeccCcc-hHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGF-LGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGf-iG~~l~~~ll~~g~~V~~I   82 (84)
                      +.++.++||||+|. ||.++++.|++.|++|..+
T Consensus       474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~  507 (1688)
T 2pff_A          474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVT  507 (1688)
T ss_dssp             CCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEE
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEE
Confidence            35688999999998 9999999999999988655

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=95.13  E-value=0.02  Score=50.12  Aligned_cols=33  Identities=30%  Similarity=0.470  Sum_probs=29.5

Q ss_pred             hccceEEEeccCcc-hHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGF-LGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGf-iG~~l~~~ll~~g~~V~~I   82 (84)
                      +.++.++||||+|. ||.++++.|++.|++|..+
T Consensus       673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~  706 (1887)
T 2uv8_A          673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVT  706 (1887)
T ss_dssp             CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            45689999999998 9999999999999988765

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=95.12  E-value=0.019  Score=41.77  Aligned_cols=28  Identities=29%  Similarity=0.483  Sum_probs=23.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      ++|.|.||||++|+.+++.|.++ +.+..
T Consensus         5 ~kV~IiGAtG~iG~~llr~L~~~-p~~el   32 (345)
T 2ozp_A            5 KTLSIVGASGYAGGEFLRLALSH-PYLEV   32 (345)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTC-TTEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHcC-CCcEE
Confidence            57999999999999999999876 55443

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=94.96  E-value=0.016  Score=42.54  Aligned_cols=25  Identities=28%  Similarity=0.472  Sum_probs=22.4

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcC
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCC   76 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g   76 (84)
                      .++|.|.||||++|+.+++.|++++
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~~   33 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGHP   33 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCC
Confidence            3689999999999999999999864

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=94.95  E-value=0.011  Score=42.90  Aligned_cols=28  Identities=25%  Similarity=0.259  Sum_probs=23.5

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQML   80 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~   80 (84)
                      ++|.|.||+|++|+.+++.|.++++.+.
T Consensus         1 mkVaI~GAtG~iG~~llr~L~~~~~~~~   28 (331)
T 2yv3_A            1 MRVAVVGATGAVGREILKVLEARNFPLS   28 (331)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcE
Confidence            3689999999999999999987666553

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=94.92  E-value=0.024  Score=41.38  Aligned_cols=27  Identities=37%  Similarity=0.597  Sum_probs=22.8

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQML   80 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~   80 (84)
                      ++|.|.||||++|..+++.|.++ +++.
T Consensus         5 ~kv~IvGatG~vG~~l~~~L~~~-p~~e   31 (337)
T 3dr3_A            5 LNTLIVGASGYAGAELVTYVNRH-PHMN   31 (337)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHC-TTEE
T ss_pred             eEEEEECCCChHHHHHHHHHHhC-CCCc
Confidence            57999999999999999988885 5443

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=94.85  E-value=0.028  Score=40.18  Aligned_cols=24  Identities=29%  Similarity=0.270  Sum_probs=21.8

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcC
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCC   76 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g   76 (84)
                      ++|.|+||+|++|+.++..|+..+
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~   24 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSP   24 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCC
Confidence            469999999999999999998876

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=94.84  E-value=0.022  Score=42.33  Aligned_cols=31  Identities=23%  Similarity=0.290  Sum_probs=24.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      ++..+|.|.|||||+|..+++.|.++ +.+..
T Consensus        17 M~~~kVaIvGAtG~vG~ell~lL~~h-p~~el   47 (381)
T 3hsk_A           17 MSVKKAGVLGATGSVGQRFILLLSKH-PEFEI   47 (381)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTC-SSEEE
T ss_pred             CCccEEEEECCCChHHHHHHHHHHcC-CCceE
Confidence            34467999999999999999987775 65543

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=94.84  E-value=0.03  Score=41.06  Aligned_cols=26  Identities=27%  Similarity=0.224  Sum_probs=22.1

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCc
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQ   78 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~   78 (84)
                      .+|.|.|||||+|..+++.|.++.+.
T Consensus         2 ~~VaIvGatG~vG~el~~lL~~h~fp   27 (344)
T 3tz6_A            2 LSIGIVGATGQVGQVMRTLLDERDFP   27 (344)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTCC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCC
Confidence            57999999999999999988886433

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=94.83  E-value=0.025  Score=43.86  Aligned_cols=32  Identities=28%  Similarity=0.370  Sum_probs=29.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      +.++.++||||++=||..+++.|.+.|++|..
T Consensus       320 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~  351 (604)
T 2et6_A          320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVV  351 (604)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEE
T ss_pred             cCCCeEEEECcchHHHHHHHHHHHHCCCEEEE
Confidence            56789999999999999999999999998764

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=94.82  E-value=0.031  Score=40.86  Aligned_cols=34  Identities=21%  Similarity=0.441  Sum_probs=27.6

Q ss_pred             hhhccceEEEeccCcchHHHHHHHHHHcC--CceEE
Q psy8179          48 EFYKDQTVFITGATGFLGSLLVEKLLRCC--PQMLS   81 (84)
Q Consensus        48 ~~~~~~~vlitGatGfiG~~l~~~ll~~g--~~V~~   81 (84)
                      .+++.++|.|+|++|++|+.++..++..|  ++|..
T Consensus         4 ~~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvL   39 (343)
T 3fi9_A            4 SYLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCL   39 (343)
T ss_dssp             CCSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEE
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEE
Confidence            35567889999999999999999998887  35543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=94.80  E-value=0.024  Score=43.97  Aligned_cols=33  Identities=30%  Similarity=0.445  Sum_probs=29.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++.++||||++=||+.+++.|.+.|++|...
T Consensus         6 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~   38 (604)
T 2et6_A            6 FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVN   38 (604)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEE
Confidence            467899999999999999999999999988653

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=94.64  E-value=0.019  Score=41.74  Aligned_cols=25  Identities=24%  Similarity=0.268  Sum_probs=22.1

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      ++|.||||+|+||++++..|+..+.
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~   28 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSV   28 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCC
Confidence            5799999999999999999987653

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=94.64  E-value=0.023  Score=41.77  Aligned_cols=30  Identities=30%  Similarity=0.354  Sum_probs=24.0

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..+|.|.|||||+|..+++.|.++ +.+...
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~h-P~~el~   36 (359)
T 4dpk_A            7 TLKAAILGATGLVGIEYVRMLSNH-PYIKPA   36 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTC-SSEEEE
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhC-CCceEE
Confidence            357999999999999999977665 655443

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=94.64  E-value=0.023  Score=41.77  Aligned_cols=30  Identities=30%  Similarity=0.354  Sum_probs=24.0

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..+|.|.|||||+|..+++.|.++ +.+...
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~h-P~~el~   36 (359)
T 4dpl_A            7 TLKAAILGATGLVGIEYVRMLSNH-PYIKPA   36 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTC-SSEEEE
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhC-CCceEE
Confidence            357999999999999999977665 655443

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=94.57  E-value=0.029  Score=40.77  Aligned_cols=28  Identities=29%  Similarity=0.468  Sum_probs=23.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      .+|.|.||+|++|+.+++.|.++ +++..
T Consensus         5 ~kV~IiGAtG~iG~~llr~L~~~-p~~el   32 (350)
T 2ep5_A            5 IKVSLLGSTGMVGQKMVKMLAKH-PYLEL   32 (350)
T ss_dssp             EEEEEESCSSHHHHHHHHHHTTC-SSEEE
T ss_pred             cEEEEECcCCHHHHHHHHHHHhC-CCcEE
Confidence            57999999999999999998876 55543

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=94.57  E-value=0.029  Score=41.59  Aligned_cols=23  Identities=26%  Similarity=0.511  Sum_probs=18.9

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC   75 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~   75 (84)
                      ++|-|.|||||+|+.++++++..
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~   23 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEE   23 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhc
Confidence            36889999999999999944443

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=94.55  E-value=0.045  Score=41.21  Aligned_cols=33  Identities=18%  Similarity=0.170  Sum_probs=29.3

Q ss_pred             ccceEEEeccCcchHHHHHHHHHH-cCCceEEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLR-CCPQMLSLR   83 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~-~g~~V~~I~   83 (84)
                      .+++++||||++=||..+++.|.+ .|.+|..+.
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~   79 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVF   79 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEe
Confidence            358899999999999999999999 999987653

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=94.48  E-value=0.029  Score=40.73  Aligned_cols=27  Identities=33%  Similarity=0.390  Sum_probs=22.9

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQML   80 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~   80 (84)
                      ++|.|.||+|++|+.+++.|.++ +++.
T Consensus         9 ~kV~IiGAtG~iG~~llr~L~~~-p~~e   35 (354)
T 1ys4_A            9 IKVGVLGATGSVGQRFVQLLADH-PMFE   35 (354)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTC-SSEE
T ss_pred             ceEEEECcCCHHHHHHHHHHhcC-CCCE
Confidence            57999999999999999998876 4443

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=94.42  E-value=0.05  Score=41.09  Aligned_cols=32  Identities=16%  Similarity=0.068  Sum_probs=29.0

Q ss_pred             cceEEEeccCcchHHHHHHHHHH-cCCceEEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLR-CCPQMLSLR   83 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~-~g~~V~~I~   83 (84)
                      +|+++||||++=||..++..|.+ .|.+|..+.
T Consensus        61 gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~   93 (422)
T 3s8m_A           61 PKKVLVIGASSGYGLASRITAAFGFGADTLGVF   93 (422)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCEEEEECCChHHHHHHHHHHHHhCCCEEEEEe
Confidence            68899999999999999999999 999987653

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=94.40  E-value=0.018  Score=42.43  Aligned_cols=30  Identities=23%  Similarity=0.351  Sum_probs=22.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHH-cCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLR-CCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~-~g~~V~~I   82 (84)
                      ++|.|.||+|++|+.++++++. +.+.+..|
T Consensus         2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i   32 (367)
T 1t4b_A            2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRP   32 (367)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEE
T ss_pred             cEEEEECCCCHHHHHHHHHHHhcCCCCeEEE
Confidence            4799999999999999995555 43344333

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=94.32  E-value=0.053  Score=38.05  Aligned_cols=32  Identities=19%  Similarity=0.233  Sum_probs=28.0

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++|+|++|-+|..+++.+...|.+|..+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~  176 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGA  176 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEE
Confidence            45789999999999999999999999877654

>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=94.32  E-value=0.042  Score=40.46  Aligned_cols=31  Identities=32%  Similarity=0.296  Sum_probs=25.5

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ...+|.|.|||||+|..+++.|.++ +.+...
T Consensus        12 ~~~~V~IvGAtG~vG~ellrlL~~h-P~~el~   42 (351)
T 1vkn_A           12 HMIRAGIIGATGYTGLELVRLLKNH-PEAKIT   42 (351)
T ss_dssp             CCEEEEEESTTSHHHHHHHHHHHHC-TTEEEE
T ss_pred             ceeEEEEECCCCHHHHHHHHHHHcC-CCcEEE
Confidence            3457999999999999999999987 666543

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=94.25  E-value=0.058  Score=39.22  Aligned_cols=34  Identities=29%  Similarity=0.343  Sum_probs=29.7

Q ss_pred             hccce-EEEe-ccC-----------------cchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQT-VFIT-GAT-----------------GFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~-vlit-Gat-----------------GfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.+++ |+|| |+|                 |-.|..+++.++..|++|..|+
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~   86 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLY   86 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEE
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence            56677 8888 677                 9999999999999999998876

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=94.20  E-value=0.059  Score=33.54  Aligned_cols=29  Identities=34%  Similarity=0.496  Sum_probs=25.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++|.|. |.+|+.+++.|.+.|++|..|
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vi   36 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVI   36 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEE
Confidence            45888886 999999999999999998765

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=94.16  E-value=0.039  Score=40.96  Aligned_cols=23  Identities=26%  Similarity=0.472  Sum_probs=19.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC   75 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~   75 (84)
                      ++|-|.|||||+|+.++++++..
T Consensus         5 ~~VaIvGATG~vG~ellr~lL~~   27 (377)
T 3uw3_A            5 MNVGLVGWRGMVGSVLMQRMQEE   27 (377)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhh
Confidence            57999999999999999944443

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=93.78  E-value=0.056  Score=40.49  Aligned_cols=32  Identities=16%  Similarity=0.170  Sum_probs=28.5

Q ss_pred             ccceEEEeccCcchHHH--HHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSL--LVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~--l~~~ll~~g~~V~~I   82 (84)
                      .+++++||||++=||..  ++..|.+.|++|..+
T Consensus        59 ~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~   92 (418)
T 4eue_A           59 GPKKVLIVGASSGFGLATRISVAFGGPEAHTIGV   92 (418)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEE
Confidence            47899999999999999  999999999988655

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=93.78  E-value=0.065  Score=37.67  Aligned_cols=32  Identities=19%  Similarity=0.254  Sum_probs=27.7

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|+||+|-+|..+++.+...|.+|..+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~  176 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGT  176 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEE
Confidence            35789999999999999999999999877554

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=93.76  E-value=0.063  Score=37.58  Aligned_cols=32  Identities=13%  Similarity=0.197  Sum_probs=27.8

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++|+|+||+|-+|..+++.+...|.+|..+
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~  171 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGT  171 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEE
Confidence            35789999999999999999999999877654

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=93.50  E-value=0.061  Score=38.68  Aligned_cols=29  Identities=24%  Similarity=0.294  Sum_probs=23.2

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      +.|+|+|.|| |++|+.+++.|.+. ++|..
T Consensus        15 ~~mkilvlGa-G~vG~~~~~~L~~~-~~v~~   43 (365)
T 3abi_A           15 RHMKVLILGA-GNIGRAIAWDLKDE-FDVYI   43 (365)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHTTT-SEEEE
T ss_pred             CccEEEEECC-CHHHHHHHHHHhcC-CCeEE
Confidence            4478999998 99999999988765 77754

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=93.50  E-value=0.086  Score=33.86  Aligned_cols=31  Identities=23%  Similarity=0.270  Sum_probs=26.3

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHc-CCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRC-CPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~-g~~V~~I   82 (84)
                      .+++|+|.| .|.+|+.+++.|.+. |++|..+
T Consensus        38 ~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vi   69 (183)
T 3c85_A           38 GHAQVLILG-MGRIGTGAYDELRARYGKISLGI   69 (183)
T ss_dssp             TTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEE
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEE
Confidence            345789998 699999999999998 9988765

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=93.36  E-value=0.098  Score=37.01  Aligned_cols=32  Identities=34%  Similarity=0.355  Sum_probs=27.7

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++|+|+|++|-+|..+++.+...|.+|..+
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~  200 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGI  200 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEE
Confidence            35789999999999999999999898877654

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=93.33  E-value=0.084  Score=37.12  Aligned_cols=32  Identities=19%  Similarity=0.283  Sum_probs=27.6

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++|+|+|++|-+|..+++.+...|.+|..+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~  186 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGS  186 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            35789999999999999999999898876544

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=93.05  E-value=0.11  Score=35.88  Aligned_cols=29  Identities=28%  Similarity=0.434  Sum_probs=26.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      ++|.|.|+||.+|+.++..|.+.|++|..
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~   40 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAA   40 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEE
Confidence            57999999999999999999999988763

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=93.02  E-value=0.12  Score=36.88  Aligned_cols=32  Identities=19%  Similarity=0.260  Sum_probs=27.7

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|+|++|-+|..+++.+...|.+|..+
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~  201 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGT  201 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence            35789999999999999999999999877544

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=92.94  E-value=0.1  Score=36.57  Aligned_cols=32  Identities=25%  Similarity=0.315  Sum_probs=27.8

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++|+|+|++|-+|...++.+...|.+|..+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~  180 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGI  180 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            46789999999999999999999999877654

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=92.89  E-value=0.11  Score=36.88  Aligned_cols=30  Identities=20%  Similarity=0.228  Sum_probs=26.8

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCC-ceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCP-QMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~-~V~~I   82 (84)
                      ++|+|+|++|-+|..+++.+...|. +|..+
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~  192 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGI  192 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEE
Confidence            7899999999999999999999998 77543

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=92.86  E-value=0.083  Score=39.93  Aligned_cols=31  Identities=16%  Similarity=0.292  Sum_probs=23.9

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHc-CCceE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRC-CPQML   80 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~-g~~V~   80 (84)
                      .+.+++|+|+|+ |++|+.++..|.+. +++|.
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~   51 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVT   51 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEE
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEE
Confidence            345678999997 99999999999987 55543

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=92.50  E-value=0.15  Score=34.10  Aligned_cols=29  Identities=21%  Similarity=0.238  Sum_probs=25.0

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      .++|.|.| +|.+|+.++..|.+.|++|..
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~   56 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFKVVV   56 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCCEEE
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEE
Confidence            36799998 899999999999999988764

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=92.49  E-value=0.13  Score=36.62  Aligned_cols=32  Identities=13%  Similarity=0.043  Sum_probs=27.7

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|+||+|-+|..+++.+...|.+|..+
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~  193 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVT  193 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEE
Confidence            35789999999999999999999999877544

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=92.37  E-value=0.15  Score=34.04  Aligned_cols=30  Identities=27%  Similarity=0.294  Sum_probs=26.3

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++|.|.| +|.+|+.++..|.+.|++|..+
T Consensus        23 mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v   52 (220)
T 4huj_A           23 MTTYAIIG-AGAIGSALAERFTAAQIPAIIA   52 (220)
T ss_dssp             SCCEEEEE-CHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEE
Confidence            46799999 8999999999999999988763

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=92.34  E-value=0.16  Score=35.88  Aligned_cols=32  Identities=6%  Similarity=0.049  Sum_probs=27.6

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|+|++|-+|...++.+...|.+|..+
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~  197 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIAT  197 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            35789999999999999999999998877553

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=92.24  E-value=0.14  Score=35.78  Aligned_cols=30  Identities=27%  Similarity=0.346  Sum_probs=26.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|.|.||.|.+|+.+...|.+.|++|..+
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~   51 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISIL   51 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEE
Confidence            469999999999999999999999987643

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=92.24  E-value=0.14  Score=37.69  Aligned_cols=23  Identities=26%  Similarity=0.367  Sum_probs=20.9

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcC
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCC   76 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g   76 (84)
                      ++|+|+|+ |++|+.+++.|.+.+
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g   24 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNR   24 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC
Confidence            47999999 999999999999986

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=91.91  E-value=0.17  Score=36.15  Aligned_cols=32  Identities=16%  Similarity=0.253  Sum_probs=27.4

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|+||+|-+|...++.+...|.+|..+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~  194 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGT  194 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEE
Confidence            35789999999999999999998888876543

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=91.86  E-value=0.2  Score=36.07  Aligned_cols=34  Identities=18%  Similarity=0.299  Sum_probs=30.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ..+++++|.|+++.+|+.+...|...|..|...|
T Consensus       158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h  191 (285)
T 3p2o_A          158 LEGKDAVIIGASNIVGRPMATMLLNAGATVSVCH  191 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEEC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEe
Confidence            4679999999999999999999999998887664

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=91.80  E-value=0.18  Score=34.84  Aligned_cols=32  Identities=22%  Similarity=0.298  Sum_probs=27.3

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|+|++|-+|...++.+...|.+|..+
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~  156 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAA  156 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            45789999999999999999988888876543

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=91.69  E-value=0.22  Score=34.51  Aligned_cols=31  Identities=16%  Similarity=0.074  Sum_probs=26.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      +.+++++|+|+ |-+|+.++..|.+.|.+|..
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v  147 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTI  147 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEE
Confidence            35689999998 56999999999999977654

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=91.61  E-value=0.19  Score=35.59  Aligned_cols=32  Identities=19%  Similarity=0.368  Sum_probs=27.7

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|+||+|-+|...++.+...|.+|..+
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~  190 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAV  190 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEE
Confidence            35789999999999999999999999877654

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=91.39  E-value=0.21  Score=35.02  Aligned_cols=32  Identities=22%  Similarity=0.269  Sum_probs=27.5

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|+||+|-+|...++.+...|.+|..+
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~  179 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAV  179 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            35789999999999999999999888877654

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=91.36  E-value=0.2  Score=35.42  Aligned_cols=27  Identities=33%  Similarity=0.675  Sum_probs=22.9

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCce
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQM   79 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V   79 (84)
                      .++|.|.|++|.+|+.+++.+.++ +++
T Consensus         7 mikV~V~Ga~G~MG~~i~~~l~~~-~~~   33 (272)
T 4f3y_A            7 SMKIAIAGASGRMGRMLIEAVLAA-PDA   33 (272)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHHC-TTE
T ss_pred             ccEEEEECCCCHHHHHHHHHHHhC-CCC
Confidence            468999999999999999999875 443

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=91.16  E-value=0.27  Score=35.28  Aligned_cols=34  Identities=24%  Similarity=0.233  Sum_probs=30.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ..+++++|.|+++.+|+.+...|...|..|...|
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~  181 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCH  181 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEEC
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEe
Confidence            5789999999999999999999999999887664

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=91.16  E-value=0.22  Score=34.89  Aligned_cols=32  Identities=16%  Similarity=0.231  Sum_probs=27.6

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|+||+|-+|...++.+...|.+|..+
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~  171 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGT  171 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEE
Confidence            35789999999999999999999889877654

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=91.14  E-value=0.26  Score=35.49  Aligned_cols=34  Identities=15%  Similarity=0.166  Sum_probs=30.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ..+++++|.|+++.+|+.+...|...|..|...|
T Consensus       159 l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~h  192 (286)
T 4a5o_A          159 LYGMDAVVVGASNIVGRPMALELLLGGCTVTVTH  192 (286)
T ss_dssp             CTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEEC
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEe
Confidence            3679999999999999999999999999887765

>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A

Probab=91.13  E-value=0.35  Score=30.59  Aligned_cols=37  Identities=14%  Similarity=0.213  Sum_probs=30.0

Q ss_pred             hhhhh-ccceEEEeccC---cchHHHHHHHHHHcCCceEEE
Q psy8179          46 IQEFY-KDQTVFITGAT---GFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        46 ~~~~~-~~~~vlitGat---GfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +...+ +.++|.|.|++   |-.|+.+++.|.+.|++|.-|
T Consensus         6 l~~ll~~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~v   46 (140)
T 1iuk_A            6 LRAYLSQAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPV   46 (140)
T ss_dssp             HHHHHHHCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred             HHHHHcCCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEe
Confidence            44556 67889999998   889999999999999975443

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=91.09  E-value=0.25  Score=39.51  Aligned_cols=28  Identities=32%  Similarity=0.468  Sum_probs=25.2

Q ss_pred             ccceEEEeccCcchHHHHHHHHH-HcCCc
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLL-RCCPQ   78 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll-~~g~~   78 (84)
                      .+++++||||+|-+|..+++.|. ++|.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~  557 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVR  557 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCC
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCc
Confidence            46789999999999999999999 78875

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=91.03  E-value=0.24  Score=45.24  Aligned_cols=33  Identities=21%  Similarity=0.327  Sum_probs=29.7

Q ss_pred             hccceEEEeccCcc-hHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGF-LGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGf-iG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+|.++||||++= ||..+++.|++.|.+|...
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~ 2167 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIAT 2167 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEE
Confidence            57899999999887 9999999999999998764

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=90.96  E-value=0.086  Score=37.13  Aligned_cols=24  Identities=33%  Similarity=0.470  Sum_probs=21.1

Q ss_pred             cceEEEeccCcchHHHHHHHHHHc
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRC   75 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~   75 (84)
                      .++|.|+|++|.+|+.+++.+.+.
T Consensus         5 ~mkV~V~Ga~G~mG~~~~~~~~~~   28 (273)
T 1dih_A            5 NIRVAIAGAGGRMGRQLIQAALAL   28 (273)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHS
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhC
Confidence            468999999999999999988753

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=90.92  E-value=0.24  Score=35.17  Aligned_cols=32  Identities=16%  Similarity=0.274  Sum_probs=27.7

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|+||+|-+|...++.+...|.+|..+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~  198 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYAT  198 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEE
Confidence            35789999999999999999999999877654

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=90.91  E-value=0.28  Score=35.52  Aligned_cols=34  Identities=9%  Similarity=0.243  Sum_probs=30.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ..+++++|.|+++.+|+.++..|++.|..|...|
T Consensus       163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~  196 (300)
T 4a26_A          163 MAGKRAVVLGRSNIVGAPVAALLMKENATVTIVH  196 (300)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEEC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEe
Confidence            4679999999999999999999999999887664

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=90.72  E-value=0.31  Score=35.10  Aligned_cols=34  Identities=15%  Similarity=0.251  Sum_probs=30.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ..+++++|.|+++.+|+.+...|...|..|...|
T Consensus       159 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~h  192 (285)
T 3l07_A          159 TEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCH  192 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEEC
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEe
Confidence            4679999999999999999999999998887654

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=90.67  E-value=0.45  Score=30.12  Aligned_cols=38  Identities=16%  Similarity=0.246  Sum_probs=30.7

Q ss_pred             hhhhhhc-cceEEEeccC---cchHHHHHHHHHHcCCceEEE
Q psy8179          45 PIQEFYK-DQTVFITGAT---GFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        45 ~~~~~~~-~~~vlitGat---GfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+...++ .++|.|.|++   |.+|+.+++.|.+.|++|.-|
T Consensus        14 ~l~~ll~~p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~V   55 (144)
T 2d59_A           14 DIREILTRYKKIALVGASPKPERDANIVMKYLLEHGYDVYPV   55 (144)
T ss_dssp             HHHHHHHHCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE
T ss_pred             HHHHHHcCCCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEE
Confidence            3555664 7889999998   899999999999999975443

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=90.47  E-value=0.34  Score=34.27  Aligned_cols=32  Identities=25%  Similarity=0.390  Sum_probs=27.4

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|+||+|-+|...++.+...|.+|..+
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~  181 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT  181 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE
Confidence            35789999999999999999999888876543

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=90.32  E-value=0.34  Score=35.02  Aligned_cols=32  Identities=25%  Similarity=0.273  Sum_probs=27.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..+++|+|+|+ |-+|..+++.+...|.+|..+
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~  195 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTIL  195 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEE
Confidence            45688999999 999999999999999877543

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=90.21  E-value=0.35  Score=33.80  Aligned_cols=30  Identities=20%  Similarity=0.162  Sum_probs=25.3

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++|.|.|+ |.+|+.+...|.+.|++|..+
T Consensus         4 ~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~   33 (359)
T 1bg6_A            4 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAW   33 (359)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCEEEEE
Confidence            367899985 999999999999999887643

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=90.00  E-value=0.28  Score=35.22  Aligned_cols=23  Identities=30%  Similarity=0.290  Sum_probs=20.5

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC   75 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~   75 (84)
                      ++|.|+||+|.+|+.++..|..+
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~   23 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQ   23 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhC
Confidence            46899999999999999988775

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=89.80  E-value=0.53  Score=29.72  Aligned_cols=34  Identities=18%  Similarity=0.296  Sum_probs=26.6

Q ss_pred             hhccceEEEeccC---cchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGAT---GFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGat---GfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++.++|.|.|++   |-+|+.+++.|.+.|++|..+
T Consensus        11 l~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~v   47 (138)
T 1y81_A           11 SKEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPV   47 (138)
T ss_dssp             ---CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEe
Confidence            3556789999997   899999999999999975443

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=89.78  E-value=0.16  Score=38.15  Aligned_cols=31  Identities=26%  Similarity=0.395  Sum_probs=26.7

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.|+|+|.|+ |=+|+++++.|.+.|++|..|
T Consensus         2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~v~vI   32 (461)
T 4g65_A            2 NAMKIIILGA-GQVGGTLAENLVGENNDITIV   32 (461)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHTCSTTEEEEEE
T ss_pred             CcCEEEEECC-CHHHHHHHHHHHHCCCCEEEE
Confidence            4578999887 789999999999999998765

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=89.77  E-value=0.15  Score=34.00  Aligned_cols=29  Identities=14%  Similarity=-0.018  Sum_probs=23.7

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++++|.|+ |.+|+.+++.|.+.|+ |..|
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vi   37 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLA   37 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEE
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEE
Confidence            357999997 9999999999999887 6543

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=89.61  E-value=0.42  Score=33.23  Aligned_cols=28  Identities=21%  Similarity=0.248  Sum_probs=24.5

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCC--ceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCP--QMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~--~V~~   81 (84)
                      ++|.|.|+ |.+|+.+...|...|+  +|..
T Consensus         8 mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l   37 (319)
T 1lld_A            8 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVL   37 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEE
Confidence            67999998 9999999999999887  7654

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=89.59  E-value=0.42  Score=33.68  Aligned_cols=32  Identities=22%  Similarity=0.399  Sum_probs=27.4

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHc-CCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRC-CPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~-g~~V~~I   82 (84)
                      .+.+|+|+|++|-+|..+++.+... |.+|..+
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~  202 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGV  202 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEE
Confidence            4578999999999999999999988 8876544

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=89.43  E-value=0.69  Score=29.32  Aligned_cols=37  Identities=16%  Similarity=0.214  Sum_probs=29.8

Q ss_pred             hhhhhc-cceEEEeccC---cchHHHHHHHHHHcCCceEEE
Q psy8179          46 IQEFYK-DQTVFITGAT---GFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        46 ~~~~~~-~~~vlitGat---GfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +...++ .++|.|.|++   |-.|+.+++.|.+.|++|..+
T Consensus         6 l~~ll~~p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~v   46 (145)
T 2duw_A            6 IAGILTSTRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPV   46 (145)
T ss_dssp             HHHHHHHCCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEE
T ss_pred             HHHHHhCCCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEe
Confidence            444554 6789999998   889999999999999986543

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=89.43  E-value=0.46  Score=33.55  Aligned_cols=32  Identities=16%  Similarity=0.258  Sum_probs=27.4

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|+||+|-+|...++.+...|.+|..+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~  181 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITT  181 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEE
Confidence            46789999999999999999988888876543

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=89.43  E-value=0.44  Score=32.15  Aligned_cols=29  Identities=21%  Similarity=0.343  Sum_probs=24.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|.|.|+ |.+|+.+...|.+.|++|..+
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~   29 (291)
T 1ks9_A            1 MKITVLGC-GALGQLWLTALCKQGHEVQGW   29 (291)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCCCEEEE
Confidence            36888887 999999999999999987653

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=89.36  E-value=0.5  Score=32.86  Aligned_cols=30  Identities=20%  Similarity=0.224  Sum_probs=24.8

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc-CCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC-CPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~-g~~V~~I   82 (84)
                      ++|.|.|++|-+|+.+++.+.+. ++++..+
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~   31 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAE   31 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEE
Confidence            36999999999999999998865 6676654

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=89.10  E-value=0.46  Score=35.00  Aligned_cols=29  Identities=17%  Similarity=0.329  Sum_probs=24.5

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|.|.| +|++|..+...|.+.|++|..+
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~   29 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGV   29 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEE
Confidence            3577776 7999999999999999988654

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=89.10  E-value=0.49  Score=33.75  Aligned_cols=31  Identities=19%  Similarity=0.368  Sum_probs=26.4

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      .+.+|+|+||+|-+|...++.+...|.+|..
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~  213 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTA  213 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEE
Confidence            3568999999999999999988888877654

>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=88.97  E-value=0.39  Score=34.90  Aligned_cols=28  Identities=25%  Similarity=0.388  Sum_probs=22.7

Q ss_pred             eEEEeccCcchHHHHHHHHHHcC-CceEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCC-PQMLSL   82 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g-~~V~~I   82 (84)
                      +|-|-|+ |++|+.+++.|.+++ +++..+
T Consensus         2 kVgI~G~-G~iGr~llR~l~~~~~p~~eiv   30 (332)
T 1hdg_O            2 RVAINGF-GRIGRLVYRIIYERKNPDIEVV   30 (332)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCTTCEEE
T ss_pred             EEEEEcc-CHHHHHHHHHHHhCCCCCeEEE
Confidence            6889999 999999999998874 555443

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=88.92  E-value=0.43  Score=33.95  Aligned_cols=30  Identities=17%  Similarity=0.237  Sum_probs=26.2

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+|+|+|+ |-+|...++.+...|.+|..+
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~  210 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMA  210 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEE
Confidence            789999999 999999999998888876544

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=88.84  E-value=0.43  Score=33.55  Aligned_cols=32  Identities=6%  Similarity=0.240  Sum_probs=27.4

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|+|++|-+|...++.+...|.+|..+
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~  175 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAV  175 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEE
Confidence            35789999999999999999988888877654

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=88.68  E-value=0.53  Score=32.06  Aligned_cols=29  Identities=28%  Similarity=0.282  Sum_probs=24.9

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|.|.|+ |.+|+.+...|.+.|++|..+
T Consensus         4 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~   32 (316)
T 2ew2_A            4 MKIAIAGA-GAMGSRLGIMLHQGGNDVTLI   32 (316)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCCcEEEE
Confidence            57889885 999999999999999987643

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=88.54  E-value=0.53  Score=33.21  Aligned_cols=28  Identities=25%  Similarity=0.348  Sum_probs=23.7

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCC--ceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCP--QMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~--~V~~   81 (84)
                      ++|.|.|+ |.+|..++..|...|+  +|..
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L   30 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVL   30 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEE
Confidence            46889998 9999999999999887  6543

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=88.53  E-value=0.51  Score=42.20  Aligned_cols=30  Identities=30%  Similarity=0.265  Sum_probs=27.2

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQML   80 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~   80 (84)
                      .+++++||||+|=||..+++.|.++|.++.
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~v 1912 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKL 1912 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEE
Confidence            568899999999999999999999998743

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=88.47  E-value=0.45  Score=34.79  Aligned_cols=32  Identities=25%  Similarity=0.289  Sum_probs=27.5

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|+|++|-+|...++.+...|.+|..+
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~  251 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAV  251 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEE
Confidence            35789999999999999999998888877654

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=88.03  E-value=0.68  Score=31.26  Aligned_cols=30  Identities=27%  Similarity=0.429  Sum_probs=24.7

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++|.|.|+ |.+|+.++..|.+.|+++..+
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~   39 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQV   39 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTCCEEEE
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEE
Confidence            467889986 999999999999999884333

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=87.71  E-value=0.76  Score=31.88  Aligned_cols=29  Identities=7%  Similarity=0.177  Sum_probs=24.1

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|.|.|+ |.+|+.+++.+.+++.++..+
T Consensus         4 mkI~ViGa-GrMG~~i~~~l~~~~~eLva~   32 (243)
T 3qy9_A            4 MKILLIGY-GAMNQRVARLAEEKGHEIVGV   32 (243)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEE
T ss_pred             eEEEEECc-CHHHHHHHHHHHhCCCEEEEE
Confidence            67999999 999999999999876555443

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=87.69  E-value=0.62  Score=32.47  Aligned_cols=29  Identities=31%  Similarity=0.434  Sum_probs=25.5

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +|+|+|++|-+|...++.+...|.+|..+
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~  181 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVAS  181 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEE
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            79999999999999999888888887554

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=87.61  E-value=0.71  Score=30.56  Aligned_cols=30  Identities=13%  Similarity=0.189  Sum_probs=25.0

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      ..++|.|.| +|.+|+.+...|.+.|++|..
T Consensus        18 ~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~   47 (209)
T 2raf_A           18 QGMEITIFG-KGNMGQAIGHNFEIAGHEVTY   47 (209)
T ss_dssp             --CEEEEEC-CSHHHHHHHHHHHHTTCEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEE
Confidence            356788998 899999999999999988764

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=87.50  E-value=0.65  Score=33.44  Aligned_cols=34  Identities=15%  Similarity=0.129  Sum_probs=30.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ..+++++|.|+++.+|+.+...|+..|..|...|
T Consensus       157 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~h  190 (288)
T 1b0a_A          157 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTH  190 (288)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEEC
T ss_pred             CCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEe
Confidence            3678999999999999999999999998887764

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=87.49  E-value=0.23  Score=30.79  Aligned_cols=28  Identities=14%  Similarity=0.228  Sum_probs=24.2

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCce
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQM   79 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V   79 (84)
                      .+++++|.|+ |.+|+.+++.|...|++|
T Consensus        20 ~~~~v~iiG~-G~iG~~~a~~l~~~g~~v   47 (144)
T 3oj0_A           20 GGNKILLVGN-GMLASEIAPYFSYPQYKV   47 (144)
T ss_dssp             CCCEEEEECC-SHHHHHHGGGCCTTTCEE
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCEE
Confidence            3688999996 999999999999888773

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=87.49  E-value=0.46  Score=32.91  Aligned_cols=31  Identities=26%  Similarity=0.273  Sum_probs=25.9

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++++|+|+ |-+|+.++..|.+.|.+|...
T Consensus       118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~  148 (272)
T 1p77_A          118 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLA  148 (272)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEE
Confidence            5688999998 569999999999999776543

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=87.29  E-value=0.7  Score=33.08  Aligned_cols=27  Identities=15%  Similarity=0.194  Sum_probs=23.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCC-ceE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCP-QML   80 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~-~V~   80 (84)
                      ++|.|.|| |.+|..++..|...|+ +|.
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~   37 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVV   37 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEE
Confidence            57999998 9999999999999887 643

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=87.23  E-value=0.74  Score=31.21  Aligned_cols=28  Identities=21%  Similarity=0.379  Sum_probs=23.7

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      ++|.|.| +|.+|+.++..|.+.|++|..
T Consensus         1 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~   28 (279)
T 2f1k_A            1 MKIGVVG-LGLIGASLAGDLRRRGHYLIG   28 (279)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCCEEEE
Confidence            3678888 799999999999999987654

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=87.17  E-value=0.76  Score=31.73  Aligned_cols=29  Identities=24%  Similarity=0.181  Sum_probs=24.5

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      .++|.|.| +|.+|+.++..+.+.|++|..
T Consensus         4 ~~kV~VIG-aG~mG~~iA~~la~~G~~V~l   32 (283)
T 4e12_A            4 ITNVTVLG-TGVLGSQIAFQTAFHGFAVTA   32 (283)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCeEEE
Confidence            35788886 599999999999999998764

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=87.13  E-value=0.77  Score=33.26  Aligned_cols=34  Identities=12%  Similarity=0.232  Sum_probs=30.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ..+++++|.|++..+|+.+...|+..|..|...|
T Consensus       163 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~h  196 (301)
T 1a4i_A          163 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCH  196 (301)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEEC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEE
Confidence            3679999999999999999999999998887664

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=87.00  E-value=0.74  Score=32.56  Aligned_cols=25  Identities=32%  Similarity=0.373  Sum_probs=22.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCC-c
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCP-Q   78 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~-~   78 (84)
                      ++|.|+|+ |++|+.++..+...|+ +
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~   28 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGD   28 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCe
Confidence            57999998 9999999999998875 5

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=86.86  E-value=0.71  Score=32.14  Aligned_cols=32  Identities=16%  Similarity=0.277  Sum_probs=27.2

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|.||+|-+|...++.+...|.+|..+
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~  183 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITT  183 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEE
Confidence            45789999999999999999988888876543

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=86.84  E-value=0.66  Score=32.71  Aligned_cols=30  Identities=10%  Similarity=0.044  Sum_probs=26.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++++|+||+|-+|...++.+...|.+|..+
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~  195 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVT  195 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            689999999999999999998888877654

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=86.82  E-value=0.68  Score=34.27  Aligned_cols=29  Identities=31%  Similarity=0.409  Sum_probs=25.7

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|+|+|. |-+|+.+++.|.+.|++|..|
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvI   33 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVL   33 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEE
Confidence            46899986 899999999999999998876

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=86.70  E-value=0.77  Score=31.78  Aligned_cols=29  Identities=31%  Similarity=0.292  Sum_probs=24.1

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|.|.|+ |.+|+.+...|.+.|++|..+
T Consensus         1 m~I~iiG~-G~mG~~~a~~L~~~g~~V~~~   29 (335)
T 1txg_A            1 MIVSILGA-GAMGSALSVPLVDNGNEVRIW   29 (335)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEE
Confidence            35778875 999999999999999987653

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=86.59  E-value=0.6  Score=32.41  Aligned_cols=30  Identities=20%  Similarity=0.208  Sum_probs=25.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      +.+++++|+|++ -+|+.++..|.+.| +|..
T Consensus       126 l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v  155 (287)
T 1nvt_A          126 VKDKNIVIYGAG-GAARAVAFELAKDN-NIII  155 (287)
T ss_dssp             CCSCEEEEECCS-HHHHHHHHHHTSSS-EEEE
T ss_pred             cCCCEEEEECch-HHHHHHHHHHHHCC-CEEE
Confidence            356889999986 89999999999998 7654

>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*

Probab=86.28  E-value=0.63  Score=34.24  Aligned_cols=28  Identities=21%  Similarity=0.342  Sum_probs=23.0

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+|-|-|+ |++|+.+++.|.++ +++..+
T Consensus        18 ikVgI~G~-G~iGr~llR~l~~~-p~veiv   45 (354)
T 3cps_A           18 GTLGINGF-GRIGRLVLRACMER-NDITVV   45 (354)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTC-SSCEEE
T ss_pred             eEEEEECC-CHHHHHHHHHHHcC-CCeEEE
Confidence            47999999 99999999999876 455443

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=86.20  E-value=0.94  Score=32.33  Aligned_cols=32  Identities=13%  Similarity=0.074  Sum_probs=27.1

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|.|++|-+|...++.+...|.+|..+
T Consensus       164 ~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~  195 (371)
T 3gqv_A          164 KPVYVLVYGGSTATATVTMQMLRLSGYIPIAT  195 (371)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            45689999999999999999988888877543

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=86.18  E-value=0.86  Score=32.08  Aligned_cols=28  Identities=11%  Similarity=0.220  Sum_probs=24.0

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCC-ceE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCP-QML   80 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~-~V~   80 (84)
                      .++|.|.|+ |.+|+.++..|...|+ +|.
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~   32 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVV   32 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEE
Confidence            357999998 9999999999999987 654

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=86.17  E-value=0.83  Score=32.35  Aligned_cols=28  Identities=29%  Similarity=0.195  Sum_probs=23.8

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCC--ceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCP--QMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~--~V~~   81 (84)
                      ++|.|.|+ |.+|+.++..|...|+  +|..
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l   30 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVL   30 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEE
Confidence            46889998 9999999999999987  6654

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=86.10  E-value=0.62  Score=35.30  Aligned_cols=31  Identities=23%  Similarity=0.225  Sum_probs=23.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      +.+++++|+|| |=+|+.++..|.+.|.+|..
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i  392 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEKGAKVVI  392 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHHCC-CEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEE
Confidence            45678999999 68899999999999987654

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=86.04  E-value=0.91  Score=31.44  Aligned_cols=29  Identities=14%  Similarity=0.302  Sum_probs=25.0

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|.|.|+ |.+|+.++..|.+.|++|..+
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~   44 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLV   44 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEE
Confidence            56888887 999999999999999988643

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=85.98  E-value=0.59  Score=34.66  Aligned_cols=26  Identities=27%  Similarity=0.339  Sum_probs=22.5

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcC
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCC   76 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g   76 (84)
                      +..+|.|+||+|.||++++..|+..+
T Consensus        31 ~~~KV~ViGAaG~VG~~la~~l~~~~   56 (375)
T 7mdh_A           31 KLVNIAVSGAAGMISNHLLFKLASGE   56 (375)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHcCC
Confidence            34679999999999999999998764

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=85.95  E-value=0.77  Score=31.95  Aligned_cols=29  Identities=38%  Similarity=0.410  Sum_probs=25.5

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +|+|+|++|-+|...++.+...|.+|..+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~  180 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEAS  180 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEE
Confidence            79999999999999999888888877543

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=85.92  E-value=1  Score=30.76  Aligned_cols=28  Identities=21%  Similarity=0.376  Sum_probs=24.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      ++|.|.| +|.+|+.++..|.+.|++|..
T Consensus         6 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~   33 (299)
T 1vpd_A            6 MKVGFIG-LGIMGKPMSKNLLKAGYSLVV   33 (299)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEE
T ss_pred             ceEEEEC-chHHHHHHHHHHHhCCCEEEE
Confidence            4788888 799999999999999988743

>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}

Probab=85.82  E-value=0.95  Score=31.93  Aligned_cols=30  Identities=23%  Similarity=0.298  Sum_probs=25.1

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++|.|.| +|.+|+.+...|.+.|++|..+
T Consensus         3 ~mkI~IiG-aG~~G~~~a~~L~~~g~~V~~~   32 (335)
T 3ghy_A            3 LTRICIVG-AGAVGGYLGARLALAGEAINVL   32 (335)
T ss_dssp             CCCEEEES-CCHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHCCCEEEEE
Confidence            35788886 5999999999999999988654

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=85.78  E-value=0.94  Score=32.65  Aligned_cols=25  Identities=32%  Similarity=0.377  Sum_probs=21.9

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      .++|.|+|+ |++|+.++..|+..+.
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~   29 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGI   29 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC
Confidence            467999996 9999999999998875

>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*

Probab=85.75  E-value=0.66  Score=33.73  Aligned_cols=28  Identities=25%  Similarity=0.356  Sum_probs=23.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+|-|-|+ |++|+.+++.|.++ +++..+
T Consensus         2 ikVgI~G~-G~iGr~l~R~l~~~-~~veiv   29 (334)
T 3cmc_O            2 VKVGINGF-GRIGRNVFRAALKN-PDIEVV   29 (334)
T ss_dssp             EEEEEESC-SHHHHHHHHHHTTC-TTEEEE
T ss_pred             eEEEEECC-CHHHHHHHHHHhCC-CCeEEE
Confidence            36889999 99999999999876 666554

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=85.55  E-value=0.96  Score=32.67  Aligned_cols=27  Identities=22%  Similarity=0.252  Sum_probs=22.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      .+.++|.|+|+ |.+|+.++..|+..+.
T Consensus         7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~   33 (326)
T 3vku_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGI   33 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCC
Confidence            34578999996 9999999999998865

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=85.49  E-value=1.1  Score=30.25  Aligned_cols=31  Identities=16%  Similarity=0.309  Sum_probs=25.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      ...++|.|.| +|.+|+.++..|.+.|++|..
T Consensus        17 ~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~   47 (245)
T 3dtt_A           17 FQGMKIAVLG-TGTVGRTMAGALADLGHEVTI   47 (245)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEE
T ss_pred             cCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEE
Confidence            4457788885 999999999999999998754

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=85.38  E-value=1  Score=31.69  Aligned_cols=31  Identities=29%  Similarity=0.345  Sum_probs=26.4

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCC-ceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCP-QMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~-~V~~I   82 (84)
                      .+.+|+|+|+ |-+|...++.+...|. +|..+
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~  198 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVS  198 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEE
Confidence            4678999999 9999999999988888 77543

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=85.35  E-value=1  Score=32.26  Aligned_cols=30  Identities=27%  Similarity=0.296  Sum_probs=24.7

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCC-ceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCP-QMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~-~V~~   81 (84)
                      +.++|.|.|+ |.+|+.++..+...|+ +|..
T Consensus         7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l   37 (315)
T 3tl2_A            7 KRKKVSVIGA-GFTGATTAFLLAQKELADVVL   37 (315)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEE
Confidence            3467999996 9999999999999887 5543

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=85.34  E-value=1.2  Score=31.34  Aligned_cols=31  Identities=23%  Similarity=0.217  Sum_probs=25.4

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|+|+ |-+|...++.+...|.+|..+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~  194 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAV  194 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEE
Confidence            3578999999 669999999998888876543

>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}

Probab=85.23  E-value=0.97  Score=30.73  Aligned_cols=32  Identities=16%  Similarity=0.201  Sum_probs=27.3

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+++++|.|| |++|-.++..|.+.|.+|..|+
T Consensus       144 ~~k~vvViGg-G~ig~E~A~~l~~~g~~Vtlv~  175 (312)
T 4gcm_A          144 KNKRLFVIGG-GDSAVEEGTFLTKFADKVTIVH  175 (312)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHTTTCSEEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEe
Confidence            4578888874 9999999999999999988774

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=85.15  E-value=0.87  Score=33.50  Aligned_cols=31  Identities=29%  Similarity=0.333  Sum_probs=26.8

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+|+|+|++|-+|...++.+...|.+|..+
T Consensus       229 g~~VlV~GasG~vG~~avqlak~~Ga~vi~~  259 (456)
T 3krt_A          229 GDNVLIWGASGGLGSYATQFALAGGANPICV  259 (456)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCeEEEE
Confidence            5789999999999999999988888876554

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=85.12  E-value=1.1  Score=32.25  Aligned_cols=27  Identities=15%  Similarity=0.172  Sum_probs=23.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      ++.++|.|.|+ |.+|+.++..|...+.
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~   31 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKEL   31 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTC
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCC
Confidence            34568999998 9999999999999877

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=85.10  E-value=1  Score=31.69  Aligned_cols=29  Identities=21%  Similarity=0.335  Sum_probs=23.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc--CCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC--CPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~--g~~V~~I   82 (84)
                      ++|.|.|+ |++|..++..|...  +++|..+
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~   31 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLL   31 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEE
Confidence            46889998 99999999999885  5666543

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=84.92  E-value=1.1  Score=32.17  Aligned_cols=31  Identities=13%  Similarity=0.025  Sum_probs=25.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCC-ceEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCP-QMLS   81 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~-~V~~   81 (84)
                      ..+++++|+|+ |=+|+.++..|.+.|. +|..
T Consensus       152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i  183 (315)
T 3tnl_A          152 IIGKKMTICGA-GGAATAICIQAALDGVKEISI  183 (315)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEE
T ss_pred             ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEE
Confidence            35689999997 7789999999999987 5543

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=84.83  E-value=0.95  Score=31.94  Aligned_cols=32  Identities=13%  Similarity=0.008  Sum_probs=26.7

Q ss_pred             cc-ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KD-QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~-~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+ .+|+|+||+|-+|...++.+...|.+|..+
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~  198 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISV  198 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            35 789999999999999998888888876544

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=84.80  E-value=1.7  Score=29.81  Aligned_cols=30  Identities=27%  Similarity=0.248  Sum_probs=25.1

Q ss_pred             hhhccceEEEeccCcchHHHHHHHHHHcCCc
Q psy8179          48 EFYKDQTVFITGATGFLGSLLVEKLLRCCPQ   78 (84)
Q Consensus        48 ~~~~~~~vlitGatGfiG~~l~~~ll~~g~~   78 (84)
                      ..+..++|+|.|+.| +|+.+++.|...|..
T Consensus        24 ~~l~~~~VlvvG~Gg-lG~~va~~La~~Gvg   53 (251)
T 1zud_1           24 QKLLDSQVLIIGLGG-LGTPAALYLAGAGVG   53 (251)
T ss_dssp             HHHHTCEEEEECCST-THHHHHHHHHHTTCS
T ss_pred             HHHhcCcEEEEccCH-HHHHHHHHHHHcCCC
Confidence            345678999999866 899999999999864

>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*

Probab=84.54  E-value=1.1  Score=30.24  Aligned_cols=32  Identities=13%  Similarity=0.238  Sum_probs=26.9

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+++++|.| .|++|-.++..|.+.|.+|..++
T Consensus       151 ~~~~vvViG-gG~ig~e~A~~l~~~G~~Vt~v~  182 (314)
T 4a5l_A          151 RNKVLMVVG-GGDAAMEEALHLTKYGSKVIILH  182 (314)
T ss_dssp             TTSEEEEEC-SSHHHHHHHHHHTTTSSEEEEEC
T ss_pred             CCCeEEEEC-CChHHHHHHHHHHHhCCeeeeec
Confidence            457788877 49999999999999999988764

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=84.41  E-value=1.1  Score=31.77  Aligned_cols=24  Identities=25%  Similarity=0.126  Sum_probs=21.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      |+|.|.|+ |.+|+.++..|...++
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~   24 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLD   24 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC
Confidence            46899999 9999999999998876

>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1

Probab=84.36  E-value=1  Score=32.52  Aligned_cols=27  Identities=22%  Similarity=0.361  Sum_probs=21.8

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      .+|.|.|+ |++|+.+++.|.++ +++..
T Consensus         2 ikVgIiGa-G~iG~~l~r~L~~~-~~~el   28 (337)
T 1cf2_P            2 KAVAINGY-GTVGKRVADAIAQQ-DDMKV   28 (337)
T ss_dssp             EEEEEECC-STTHHHHHHHHHTS-SSEEE
T ss_pred             eEEEEEeE-CHHHHHHHHHHHcC-CCcEE
Confidence            36889999 99999999999875 45543

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=84.27  E-value=1.4  Score=33.12  Aligned_cols=33  Identities=9%  Similarity=0.072  Sum_probs=27.8

Q ss_pred             ccceEEEeccCcchHHHHHHHHH-HcCCceEEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLL-RCCPQMLSLR   83 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll-~~g~~V~~I~   83 (84)
                      .+|++|||||+.=+|......|. ..|.+|..++
T Consensus        49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~   82 (401)
T 4ggo_A           49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVS   82 (401)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEe
Confidence            35899999999999999888887 5788887765

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=84.18  E-value=1.3  Score=31.62  Aligned_cols=25  Identities=12%  Similarity=0.457  Sum_probs=22.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCC-c
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCP-Q   78 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~-~   78 (84)
                      ++|.|.|+ |++|..+...|...|+ +
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~   30 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGD   30 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCe
Confidence            57999998 9999999999999887 5

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=84.14  E-value=1.1  Score=33.38  Aligned_cols=29  Identities=10%  Similarity=0.280  Sum_probs=24.7

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|.|.| +|++|..++..|.+.|++|..+
T Consensus         3 mkI~VIG-~G~vG~~lA~~La~~G~~V~~~   31 (450)
T 3gg2_A            3 LDIAVVG-IGYVGLVSATCFAELGANVRCI   31 (450)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhcCCEEEEE
Confidence            5677876 5999999999999999998754

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=84.05  E-value=1.3  Score=31.10  Aligned_cols=30  Identities=27%  Similarity=0.254  Sum_probs=25.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCc-eE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQ-ML   80 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~-V~   80 (84)
                      .++++++|+|+ |-+|+.++..|.+.|.. |.
T Consensus       125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~  155 (283)
T 3jyo_A          125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQ  155 (283)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEE
Confidence            35689999998 77899999999999874 54

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=84.05  E-value=1.1  Score=30.94  Aligned_cols=29  Identities=34%  Similarity=0.398  Sum_probs=25.6

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +|+|+|++|-+|...++.+...|.+|..+
T Consensus       149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~  177 (324)
T 3nx4_A          149 EVVVTGASGGVGSTAVALLHKLGYQVAAV  177 (324)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEE
T ss_pred             eEEEECCCcHHHHHHHHHHHHcCCEEEEE
Confidence            49999999999999999998888887654

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=83.94  E-value=1.5  Score=29.95  Aligned_cols=28  Identities=18%  Similarity=0.250  Sum_probs=24.1

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      ++|.|.| .|.+|+.++..|.+.|++|..
T Consensus         5 ~~i~iiG-~G~~G~~~a~~l~~~g~~V~~   32 (301)
T 3cky_A            5 IKIGFIG-LGAMGKPMAINLLKEGVTVYA   32 (301)
T ss_dssp             CEEEEEC-CCTTHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCeEEE
Confidence            5788887 699999999999999988753

>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}

Probab=83.90  E-value=1.3  Score=31.13  Aligned_cols=31  Identities=26%  Similarity=0.358  Sum_probs=24.9

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..++|.|.|+ |.+|+.+...|.+.|++|..+
T Consensus        18 ~~~kI~IiGa-Ga~G~~~a~~L~~~G~~V~l~   48 (318)
T 3hwr_A           18 QGMKVAIMGA-GAVGCYYGGMLARAGHEVILI   48 (318)
T ss_dssp             --CEEEEESC-SHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCcEEEECc-CHHHHHHHHHHHHCCCeEEEE
Confidence            4577888854 999999999999999988754

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=83.83  E-value=1.4  Score=30.54  Aligned_cols=31  Identities=26%  Similarity=0.296  Sum_probs=26.1

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|.|+ |-+|...++.+...|.+|..+
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~  172 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLV  172 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEE
Confidence            3578999999 999999999888888876543

>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*

Probab=83.73  E-value=1.2  Score=32.35  Aligned_cols=29  Identities=17%  Similarity=0.189  Sum_probs=23.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcC-CceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCC-PQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g-~~V~~I   82 (84)
                      .+|-|-|+ |++|+.+++.|.+++ +++..+
T Consensus         3 ikVgI~G~-G~IGr~v~r~l~~~~~~~~evv   32 (339)
T 3b1j_A            3 IRVAINGF-GRIGRNFLRCWFGRQNTDLEVV   32 (339)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHCSCCSEEEE
T ss_pred             eEEEEECC-CHHHHHHHHHHHhcCCCCeEEE
Confidence            36899999 999999999998864 555543

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=83.71  E-value=0.82  Score=33.37  Aligned_cols=26  Identities=35%  Similarity=0.436  Sum_probs=21.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHc
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRC   75 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~   75 (84)
                      +...+|.|+||+|.||+.++..|...
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~   47 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARG   47 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhc
Confidence            34458999999999999999887764

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=83.65  E-value=1.3  Score=32.06  Aligned_cols=31  Identities=16%  Similarity=0.339  Sum_probs=25.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      ++.++|.|.| .|.+|+.++..|.+.|++|..
T Consensus        20 m~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v   50 (358)
T 4e21_A           20 FQSMQIGMIG-LGRMGADMVRRLRKGGHECVV   50 (358)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEE
T ss_pred             hcCCEEEEEC-chHHHHHHHHHHHhCCCEEEE
Confidence            4557888887 799999999999999998764

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=83.63  E-value=1.2  Score=31.56  Aligned_cols=32  Identities=6%  Similarity=0.124  Sum_probs=26.4

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|.||+|-+|...++.+...|.+|..+
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~  198 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINV  198 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEE
Confidence            35789999999999999998888788776543

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=83.42  E-value=1.1  Score=30.57  Aligned_cols=27  Identities=26%  Similarity=0.345  Sum_probs=23.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQML   80 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~   80 (84)
                      ++|.|.| +|.+|+.++..|.+.|++|.
T Consensus         4 m~i~iiG-~G~~G~~~a~~l~~~g~~V~   30 (295)
T 1yb4_A            4 MKLGFIG-LGIMGSPMAINLARAGHQLH   30 (295)
T ss_dssp             CEEEECC-CSTTHHHHHHHHHHTTCEEE
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhCCCEEE
Confidence            5788887 79999999999999998874

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=83.29  E-value=1.3  Score=31.52  Aligned_cols=25  Identities=28%  Similarity=0.328  Sum_probs=21.7

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      .++|.|.|+ |++|..++..|+..+.
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~   31 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQT   31 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC
Confidence            357999998 9999999999998865

>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O

Probab=83.29  E-value=1.1  Score=32.51  Aligned_cols=28  Identities=21%  Similarity=0.304  Sum_probs=22.9

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+|-|-|+ |++|+.+++.|.++ +++..+
T Consensus         4 ikVgI~G~-GrIGr~l~R~l~~~-p~vevv   31 (337)
T 3e5r_O            4 IKIGINGF-GRIGRLVARVALQS-EDVELV   31 (337)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTC-SSEEEE
T ss_pred             eEEEEECc-CHHHHHHHHHHhCC-CCeEEE
Confidence            47899999 99999999999876 555443

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=83.23  E-value=1.4  Score=30.28  Aligned_cols=32  Identities=16%  Similarity=0.361  Sum_probs=27.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++|+|.|| |-+|..-++.|++.|.+|+.|
T Consensus        29 L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVv   60 (223)
T 3dfz_A           29 LKGRSVLVVGG-GTIATRRIKGFLQEGAAITVV   60 (223)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEE
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEE
Confidence            56789999986 689999999999999988765

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=83.13  E-value=1.4  Score=31.43  Aligned_cols=26  Identities=27%  Similarity=0.282  Sum_probs=23.0

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCC-ce
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCP-QM   79 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~-~V   79 (84)
                      ++|.|.|| |++|..++..|...|+ +|
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V   41 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDV   41 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeE
Confidence            57999998 9999999999999887 64

>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A

Probab=83.11  E-value=1.1  Score=33.86  Aligned_cols=23  Identities=22%  Similarity=0.391  Sum_probs=20.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC   75 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~   75 (84)
                      ++|.|.|+||.||.+.+.-+.+.
T Consensus        22 k~i~ILGSTGSIGtqtLdVi~~~   44 (398)
T 2y1e_A           22 LRVVVLGSTGSIGTQALQVIADN   44 (398)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHC
T ss_pred             eEEEEEccCcHHHHHHHHHHHhC
Confidence            67999999999999988877775

>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*

Probab=82.96  E-value=1.3  Score=32.37  Aligned_cols=28  Identities=18%  Similarity=0.147  Sum_probs=22.4

Q ss_pred             eEEEeccCcchHHHHHHHHHHcC-CceEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCC-PQMLSL   82 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g-~~V~~I   82 (84)
                      +|-|-|+ |++|+.+++.|.+++ +++..+
T Consensus         3 kVgInG~-G~IGr~llR~l~~~~~p~~eiv   31 (337)
T 1rm4_O            3 KVAINGF-GRIGRNFLRCWHGRKDSPLDVV   31 (337)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCSSCSEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEE
Confidence            6889999 999999999998763 455443

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=82.86  E-value=1.4  Score=30.92  Aligned_cols=31  Identities=16%  Similarity=0.174  Sum_probs=25.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCC-ceEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCP-QMLS   81 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~-~V~~   81 (84)
                      +.+++++|+|+ |-+|+.++..|.+.|. +|..
T Consensus       139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v  170 (297)
T 2egg_A          139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDM  170 (297)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEE
T ss_pred             CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEE
Confidence            35688999998 5699999999999987 5543

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=82.81  E-value=1.6  Score=31.70  Aligned_cols=31  Identities=16%  Similarity=0.086  Sum_probs=26.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      ..+++|+|+|+ |-+|..+++.+...|.+|..
T Consensus       166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~  196 (377)
T 2vhw_A          166 VEPADVVVIGA-GTAGYNAARIANGMGATVTV  196 (377)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEE
Confidence            45789999998 99999999999999887654

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=82.65  E-value=1.6  Score=29.94  Aligned_cols=28  Identities=21%  Similarity=0.304  Sum_probs=23.7

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      ++|.|.| .|.+|+.+...|.+.|++|..
T Consensus         2 ~~I~iiG-~G~mG~~~a~~l~~~G~~V~~   29 (287)
T 3pdu_A            2 TTYGFLG-LGIMGGPMAANLVRAGFDVTV   29 (287)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHHHHTCCEEE
T ss_pred             CeEEEEc-cCHHHHHHHHHHHHCCCeEEE
Confidence            3577775 899999999999999998864

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=82.52  E-value=1.6  Score=32.05  Aligned_cols=30  Identities=20%  Similarity=0.276  Sum_probs=26.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQML   80 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~   80 (84)
                      +.+++|.|.|. |-+|+.+++.|.+.|.+|.
T Consensus       171 L~GktV~V~G~-G~VG~~~A~~L~~~GakVv  200 (364)
T 1leh_A          171 LEGLAVSVQGL-GNVAKALCKKLNTEGAKLV  200 (364)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEE
T ss_pred             CCcCEEEEECc-hHHHHHHHHHHHHCCCEEE
Confidence            46789999986 8899999999999999876

>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*

Probab=82.37  E-value=1.3  Score=33.08  Aligned_cols=23  Identities=35%  Similarity=0.485  Sum_probs=20.8

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC   75 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~   75 (84)
                      ++|.|.|+||.||+..++.+.++
T Consensus         5 ~rI~ILGsTGSIG~~~l~vi~~~   27 (388)
T 1r0k_A            5 RTVTVLGATGSIGHSTLDLIERN   27 (388)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHT
T ss_pred             eEEEEECCCeEeHHHHHHHHHhC
Confidence            67999999999999999998875

>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*

Probab=82.36  E-value=1.3  Score=32.09  Aligned_cols=28  Identities=18%  Similarity=0.269  Sum_probs=23.0

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +|-|-|. |++|+.+++.+.++ +++..+.
T Consensus         3 kVgI~G~-G~iG~~l~R~l~~~-~~veiv~   30 (330)
T 1gad_O            3 KVGINGF-GRIGRIVFRAAQKR-SDIEIVA   30 (330)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTC-SSEEEEE
T ss_pred             EEEEECc-CHHHHHHHHHHHcC-CCeEEEE
Confidence            6889995 99999999999886 6776553

>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*

Probab=82.29  E-value=1.2  Score=33.24  Aligned_cols=29  Identities=28%  Similarity=0.486  Sum_probs=22.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc-CCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC-CPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~-g~~V~~   81 (84)
                      ++|.|.|+||.||.+.++-+.++ .++|..
T Consensus         4 k~i~ILGsTGSIG~~tldVi~~~~~~~vva   33 (376)
T 3a06_A            4 RTLVILGATGSIGTQTLDVLKKVKGIRLIG   33 (376)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSCSEEEEE
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCeEEEE
Confidence            67999999999999988877775 344443

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=82.08  E-value=1.6  Score=30.53  Aligned_cols=28  Identities=18%  Similarity=0.264  Sum_probs=23.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcC--CceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCC--PQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g--~~V~~   81 (84)
                      ++|.|.| +|.+|+.++..|...|  ++|..
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l   31 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVF   31 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEE
Confidence            4688999 8999999999999988  56543

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=81.93  E-value=1.7  Score=30.42  Aligned_cols=31  Identities=26%  Similarity=0.354  Sum_probs=26.2

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCC-ceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCP-QMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~-~V~~I   82 (84)
                      .+.+|+|+|+ |-+|...++.+...|. +|..+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~  195 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVS  195 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEE
Confidence            4678999999 9999999998888888 77654

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=81.92  E-value=1.8  Score=30.80  Aligned_cols=31  Identities=26%  Similarity=0.279  Sum_probs=26.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      ..+++|.|.|. |.+|+.+++.+...|++|..
T Consensus       153 l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~  183 (330)
T 2gcg_A          153 LTQSTVGIIGL-GRIGQAIARRLKPFGVQRFL  183 (330)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHGGGTCCEEE
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHCCCEEEE
Confidence            45678989875 99999999999999988754

>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*

Probab=81.65  E-value=1.3  Score=34.21  Aligned_cols=23  Identities=26%  Similarity=0.336  Sum_probs=19.9

Q ss_pred             cceEEEeccCcchHHHHHHHHHH
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLR   74 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~   74 (84)
                      .++|.|.|+||.||.+.+.-+.+
T Consensus        77 mk~I~ILGSTGSIGtqTLdVi~~   99 (488)
T 3au8_A           77 PINVAIFGSTGSIGTNALNIIRE   99 (488)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHH
T ss_pred             ceEEEEEccCcHHHHHHHHHHHc
Confidence            36799999999999998887776

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=81.58  E-value=1.7  Score=31.16  Aligned_cols=24  Identities=29%  Similarity=0.336  Sum_probs=21.0

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      |+|.|+|+ |.+|+.++..++..+.
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~   24 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDV   24 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC
Confidence            46889996 9999999999998865

>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*

Probab=81.55  E-value=1.3  Score=32.36  Aligned_cols=28  Identities=18%  Similarity=0.267  Sum_probs=23.0

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|.|.|. |++|..+...|.+ |++|..+
T Consensus         1 MkI~VIG~-G~vG~~~A~~La~-G~~V~~~   28 (402)
T 1dlj_A            1 MKIAVAGS-GYVGLSLGVLLSL-QNEVTIV   28 (402)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHhC-CCEEEEE
Confidence            35777765 9999999999999 8888654

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=81.54  E-value=1.9  Score=29.31  Aligned_cols=27  Identities=19%  Similarity=0.336  Sum_probs=22.9

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      +|.|.| .|.+|+.+...|.+.|++|..
T Consensus         2 ~i~iiG-~G~mG~~~a~~l~~~g~~V~~   28 (296)
T 2gf2_A            2 PVGFIG-LGNMGNPMAKNLMKHGYPLII   28 (296)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHHTTCCEEE
T ss_pred             eEEEEe-ccHHHHHHHHHHHHCCCEEEE
Confidence            567776 799999999999999988754

>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*

Probab=81.50  E-value=1.9  Score=28.88  Aligned_cols=28  Identities=14%  Similarity=0.277  Sum_probs=23.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcC-CceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCC-PQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g-~~V~~   81 (84)
                      ++|.|.| +|.+|+.+...|.+.| ++|..
T Consensus         1 m~i~iiG-~G~mG~~~a~~l~~~g~~~v~~   29 (263)
T 1yqg_A            1 MNVYFLG-GGNMAAAVAGGLVKQGGYRIYI   29 (263)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCSCEEEE
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCCCCeEEE
Confidence            3577887 5999999999999998 77753

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=81.41  E-value=1.5  Score=31.48  Aligned_cols=34  Identities=18%  Similarity=0.067  Sum_probs=29.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHc--CCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRC--CPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~--g~~V~~I~   83 (84)
                      ..+++++|.|++..+|+.+...|.+.  +..|...|
T Consensus       156 l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h  191 (281)
T 2c2x_A          156 IAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCH  191 (281)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEEC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence            46789999999999999999999998  77777654

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=81.38  E-value=2.1  Score=30.02  Aligned_cols=30  Identities=17%  Similarity=0.246  Sum_probs=24.9

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      +.++|.|.| .|.+|+.+...|.+.|++|..
T Consensus        30 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~   59 (320)
T 4dll_A           30 YARKITFLG-TGSMGLPMARRLCEAGYALQV   59 (320)
T ss_dssp             CCSEEEEEC-CTTTHHHHHHHHHHTTCEEEE
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHhCCCeEEE
Confidence            346788885 599999999999999998764

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=81.35  E-value=1.9  Score=30.86  Aligned_cols=26  Identities=19%  Similarity=0.247  Sum_probs=22.1

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      +.++|.|.| +|.+|+.++..|...+.
T Consensus         4 ~~~kI~iiG-aG~vG~~~a~~l~~~~~   29 (321)
T 3p7m_A            4 ARKKITLVG-AGNIGGTLAHLALIKQL   29 (321)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCC
Confidence            346799999 59999999999998876

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=81.23  E-value=1.9  Score=30.62  Aligned_cols=26  Identities=27%  Similarity=0.340  Sum_probs=22.2

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      +.++|.|.|+ |++|..++..|...+.
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~   30 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSI   30 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC
Confidence            3468999998 9999999999988763

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=81.21  E-value=1.9  Score=30.50  Aligned_cols=31  Identities=19%  Similarity=0.117  Sum_probs=25.8

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|+|+ |-+|...++.+...|.+|..+
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~  209 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVI  209 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEE
Confidence            3578999999 999999999888888876543

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=81.18  E-value=1.9  Score=29.46  Aligned_cols=28  Identities=21%  Similarity=0.345  Sum_probs=23.9

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      ++|.|.| .|.+|+.+...|.+.|++|..
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~   29 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTI   29 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEE
Confidence            4677776 699999999999999998864

>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*

Probab=81.14  E-value=1.5  Score=31.82  Aligned_cols=27  Identities=26%  Similarity=0.340  Sum_probs=22.1

Q ss_pred             ceEEEeccCcchHHHHHHHHHH---cCCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLR---CCPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~---~g~~V~~   81 (84)
                      .+|.|-|+ |++|+.+++.|.+   + +++..
T Consensus         3 ikVgI~G~-G~iGr~l~r~l~~~~~~-~~~ei   32 (339)
T 2x5j_O            3 VRVAINGF-GRIGRNVVRALYESGRR-AEITV   32 (339)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTSGG-GTEEE
T ss_pred             eEEEEECc-CHHHHHHHHHHHcCCCC-CCEEE
Confidence            36899998 9999999999988   5 45544

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=81.11  E-value=1.9  Score=31.31  Aligned_cols=25  Identities=12%  Similarity=0.029  Sum_probs=22.1

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      .++|.|.|+ |.+|+.++..++..+.
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~   45 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDL   45 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC
Confidence            367999998 9999999999998875

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=81.06  E-value=1.9  Score=33.13  Aligned_cols=31  Identities=10%  Similarity=0.138  Sum_probs=26.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      +.+++++|+|+. -||..+++.|...|.+|..
T Consensus       263 L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv  293 (488)
T 3ond_A          263 IAGKVAVVAGYG-DVGKGCAAALKQAGARVIV  293 (488)
T ss_dssp             CTTCEEEEECCS-HHHHHHHHHHHHTTCEEEE
T ss_pred             ccCCEEEEECCC-HHHHHHHHHHHHCCCEEEE
Confidence            357899999976 8999999999999987754

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=80.82  E-value=2.1  Score=29.06  Aligned_cols=27  Identities=33%  Similarity=0.602  Sum_probs=22.8

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCC--ceE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCP--QML   80 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~--~V~   80 (84)
                      ++|.|.| .|.+|+.++..|.+.|+  +|.
T Consensus         2 ~~I~iIG-~G~mG~~~a~~l~~~g~~~~V~   30 (281)
T 2g5c_A            2 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIY   30 (281)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCCSEEE
T ss_pred             cEEEEEe-cCHHHHHHHHHHHhcCCCcEEE
Confidence            4688888 89999999999999987  554

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=80.72  E-value=1.8  Score=30.78  Aligned_cols=32  Identities=19%  Similarity=0.308  Sum_probs=24.7

Q ss_pred             ccceEEEeccCcchHHHHHHHHHH-cCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLR-CCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~-~g~~V~~I   82 (84)
                      .+.+|+|+||+|-+|...++.+.. .|.+|..+
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~  203 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIAT  203 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEE
Confidence            356899999999999988877765 46666543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	84
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	7e-07
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	1e-06
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	2e-06
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	3e-06
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	4e-06
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	9e-06
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	1e-05
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	2e-05
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	3e-05
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	3e-05
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	4e-05
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	7e-05
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	8e-05
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	9e-05
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	1e-04
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	1e-04
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	1e-04
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-04
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-04
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-04
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-04
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-04
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	3e-04
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	3e-04
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	3e-04
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	4e-04
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	5e-04
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	0.001
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	0.002
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	0.002
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	0.002

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 42.5 bits (98), Expect = 7e-07
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 49 FYKDQTVFITGATGFLGSLLVEKLLR 74
          F++ + VF+TG TGF G  L   L  
Sbjct: 5  FWQGKRVFVTGHTGFKGGWLSLWLQT 30

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 42.1 bits (97), Expect = 1e-06
 Identities = 11/24 (45%), Positives = 16/24 (66%)

Query: 51 KDQTVFITGATGFLGSLLVEKLLR 74
          +   V +TGA GF+ S +VE+LL 
Sbjct: 10 EGSLVLVTGANGFVASHVVEQLLE 33

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 41.4 bits (95), Expect = 2e-06
 Identities = 9/21 (42%), Positives = 14/21 (66%)

Query: 54 TVFITGATGFLGSLLVEKLLR 74
          TV +TGA+G  G ++ +KL  
Sbjct: 5  TVLVTGASGRTGQIVYKKLKE 25

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (94), Expect = 3e-06
 Identities = 10/31 (32%), Positives = 23/31 (74%), Gaps = 2/31 (6%)

Query: 46 IQEFYK--DQTVFITGATGFLGSLLVEKLLR 74
          ++E ++  +++VFI GA+G  G +L++++L 
Sbjct: 6  LREDFRMQNKSVFILGASGETGRVLLKEILE 36

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 40.8 bits (94), Expect = 4e-06
 Identities = 7/24 (29%), Positives = 13/24 (54%)

Query: 51 KDQTVFITGATGFLGSLLVEKLLR 74
          + +T+ + GATG  G+ L+     
Sbjct: 2  QKKTIAVVGATGRQGASLIRVAAA 25

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (90), Expect = 9e-06
 Identities = 6/22 (27%), Positives = 12/22 (54%)

Query: 53 QTVFITGATGFLGSLLVEKLLR 74
          + + I GATG  G   + + ++
Sbjct: 4  KKIAIFGATGQTGLTTLAQAVQ 25

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 39.4 bits (90), Expect = 1e-05
 Identities = 8/24 (33%), Positives = 12/24 (50%)

Query: 51 KDQTVFITGATGFLGSLLVEKLLR 74
          K   V I G TG++G  +V   + 
Sbjct: 2  KKSRVLIVGGTGYIGKRIVNASIS 25

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 39.0 bits (89), Expect = 2e-05
 Identities = 8/22 (36%), Positives = 14/22 (63%)

Query: 53 QTVFITGATGFLGSLLVEKLLR 74
          + V + GATG  G  L++++L 
Sbjct: 3  KRVLLAGATGLTGEHLLDRILS 24

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.1 bits (87), Expect = 3e-05
 Identities = 8/21 (38%), Positives = 12/21 (57%)

Query: 54 TVFITGATGFLGSLLVEKLLR 74
          +  +TG TG  G+ L + LL 
Sbjct: 2  SALVTGITGQDGAYLAKLLLE 22

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 37.8 bits (86), Expect = 3e-05
 Identities = 6/20 (30%), Positives = 12/20 (60%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          + + GATG++G  + +  L 
Sbjct: 6  ILLIGATGYIGRHVAKASLD 25

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 37.9 bits (87), Expect = 4e-05
 Identities = 11/21 (52%), Positives = 11/21 (52%)

Query: 54 TVFITGATGFLGSLLVEKLLR 74
             ITG TG  GS L E LL 
Sbjct: 3  VALITGVTGQDGSYLAEFLLE 23

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.4 bits (85), Expect = 7e-05
 Identities = 11/21 (52%), Positives = 11/21 (52%)

Query: 54 TVFITGATGFLGSLLVEKLLR 74
             ITG TG  GS L E LL 
Sbjct: 3  IALITGITGQDGSYLTEFLLG 23

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.0 bits (84), Expect = 8e-05
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query: 54 TVFITGATGFLGSLLVEKLLR 74
           V +TG  G++GS  V +L+ 
Sbjct: 3  IVLVTGGAGYIGSHTVVELIE 23

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 36.7 bits (84), Expect = 9e-05
 Identities = 8/20 (40%), Positives = 14/20 (70%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          + ITG  GF+GS +V  +++
Sbjct: 3  ILITGGAGFIGSAVVRHIIK 22

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.5 bits (83), Expect = 1e-04
 Identities = 8/30 (26%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 47 QEFY--KDQTVFITGATGFLGSLLVEKLLR 74
          ++++  ++  + ITGA GF+ S +  +L  
Sbjct: 8  EQYWPSENLKISITGAGGFIASHIARRLKH 37

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 1e-04
 Identities = 10/20 (50%), Positives = 14/20 (70%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          + ITG  GF+GS L +KL+ 
Sbjct: 4  ILITGGAGFVGSHLTDKLMM 23

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 36.0 bits (82), Expect = 1e-04
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          VFI G  G +GS +  +L +
Sbjct: 5  VFIAGHRGMVGSAIRRQLEQ 24

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 35.9 bits (82), Expect = 2e-04
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          + +TG  GF+GS  V +LL 
Sbjct: 3  LLVTGGAGFIGSHFVRQLLA 22

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (82), Expect = 2e-04
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          V +TG  G++GS  V +LL 
Sbjct: 5  VLVTGGAGYIGSHTVLELLE 24

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 36.1 bits (82), Expect = 2e-04
 Identities = 7/21 (33%), Positives = 11/21 (52%)

Query: 54 TVFITGATGFLGSLLVEKLLR 74
           + +TG  GF+GS  V  +  
Sbjct: 4  NIIVTGGAGFIGSNFVHYVYN 24

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 36.1 bits (82), Expect = 2e-04
 Identities = 8/20 (40%), Positives = 14/20 (70%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          V +TG +G++GS    +LL+
Sbjct: 3  VLVTGGSGYIGSHTCVQLLQ 22

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 35.9 bits (81), Expect = 2e-04
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          V + G  G++GS  V  LLR
Sbjct: 5  VLVCGGAGYIGSHFVRALLR 24

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 35.3 bits (80), Expect = 3e-04
 Identities = 11/24 (45%), Positives = 16/24 (66%)

Query: 51 KDQTVFITGATGFLGSLLVEKLLR 74
          + +   ITG  GF+GS L+E LL+
Sbjct: 15 QPKVWLITGVAGFIGSNLLETLLK 38

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 35.1 bits (79), Expect = 3e-04
 Identities = 10/20 (50%), Positives = 11/20 (55%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          + ITG  GFLGS L    L 
Sbjct: 3  LLITGGCGFLGSNLASFALS 22

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 35.3 bits (79), Expect = 3e-04
 Identities = 11/20 (55%), Positives = 14/20 (70%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          V I G  GF+G+ L E+LLR
Sbjct: 3  VLILGVNGFIGNHLTERLLR 22

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (79), Expect = 4e-04
 Identities = 11/20 (55%), Positives = 11/20 (55%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
            ITG TG  GS L E LL 
Sbjct: 4  ALITGITGQDGSYLAEFLLE 23

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 34.6 bits (77), Expect = 5e-04
 Identities = 5/20 (25%), Positives = 8/20 (40%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          V + G  G+ G      L +
Sbjct: 4  VMVIGGDGYCGWATALHLSK 23

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 33.8 bits (75), Expect = 0.001
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          + +TG  GF+GS +V+ L  
Sbjct: 2  IIVTGGAGFIGSNIVKALND 21

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 33.3 bits (74), Expect = 0.002
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          + ITGA G LG  + ++L  
Sbjct: 4  ILITGANGQLGREIQKQLKG 23

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 33.4 bits (74), Expect = 0.002
 Identities = 6/20 (30%), Positives = 9/20 (45%)

Query: 55 VFITGATGFLGSLLVEKLLR 74
          + + G TG +G  L   L  
Sbjct: 3  ILLFGKTGQVGWELQRSLAP 22

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 33.1 bits (74), Expect = 0.002
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 47 QEFYKDQTVFITGATGFLGSLLVEKLLR 74
           E+    TV +TG TG +G  +   L R
Sbjct: 4  DEWKPTGTVLVTGGTGGVGGQIARWLAR 31

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	84
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	98.91
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	98.78
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	98.77
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	98.76
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	98.73
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	98.73
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	98.73
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.7
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.68
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	98.68
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.67
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	98.65
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.65
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.65
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	98.65
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	98.63
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	98.62
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	98.6
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	98.59
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.58
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	98.55
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	98.54
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	98.53
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.53
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.5
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	98.49
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.49
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	98.47
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	98.45
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	98.33
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.79
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.74
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	97.59
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.5
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	97.5
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.47
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	97.47
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.47
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.46
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.46
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.46
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.44
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	97.43
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	97.43
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.43
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.43
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	97.42
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	97.39
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.39
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.39
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.38
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.34
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.33
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.32
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	97.3
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.3
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.29
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.29
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.27
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.26
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.26
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.25
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.24
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.23
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	97.23
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.22
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.21
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	97.21
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.2
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.2
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.2
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.2
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.18
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	97.18
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.18
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	97.17
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	97.14
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.13
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.11
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.08
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.07
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.06
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.05
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.04
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	97.02
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.96
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	96.91
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.88
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.88
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.85
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.81
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	96.79
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	96.76
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	96.63
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	96.61
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	96.49
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.46
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	96.42
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.42
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	96.2
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	96.15
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.04
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.01
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	95.96
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.87
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	95.82
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	95.48
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	95.35
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	95.22
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	94.93
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	94.84
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.48
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	94.41
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	94.39
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	94.25
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	93.35
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	93.01
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	92.99
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	92.81
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	92.79
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	92.77
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	92.73
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	92.7
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	92.34
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	92.3
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	92.21
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.08
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	91.81
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	91.74
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	91.2
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	91.17
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	91.0
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	90.99
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	90.92
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	90.7
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	90.56
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	90.39
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	90.38
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	90.13
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	89.94
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	89.7
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	89.58
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	89.12
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	89.03
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	88.88
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	88.67
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	88.16
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	87.79
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	87.48
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	87.1
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	86.89
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	86.87
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	86.84
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	86.78
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	86.27
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	85.74
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	85.46
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	85.39
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	85.28
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	85.28
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	85.24
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	85.08
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	85.02
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	84.8
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	84.45
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	84.33
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	83.21
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	82.95
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	82.66
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	82.6
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	82.4
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	81.91
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	81.84
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	81.83
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	81.48
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	81.48
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	81.28
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	81.2
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	81.05
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	80.89
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	80.84
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	80.76
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	80.63
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	80.55
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	80.4
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	80.36
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	80.29
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	80.19
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	80.12
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	80.07

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=98.91  E-value=4.6e-10  Score=77.57  Aligned_cols=35  Identities=31%  Similarity=0.501  Sum_probs=32.4

Q ss_pred             hhhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          48 EFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        48 ~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++++|+|+|||||||||+++++.|+++|++|..+
T Consensus         4 ~~~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~   38 (356)
T d1rkxa_           4 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGY   38 (356)
T ss_dssp             HHHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             hhhCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            46889999999999999999999999999998865

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.78  E-value=2.1e-09  Score=75.82  Aligned_cols=31  Identities=16%  Similarity=0.241  Sum_probs=28.5

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ||+|+|||||||||++++++|++.||+|..+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~i   31 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIV   31 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEE
Confidence            5899999999999999999999999999765

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.77  E-value=2.5e-09  Score=73.03  Aligned_cols=31  Identities=29%  Similarity=0.367  Sum_probs=28.5

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      |+|||||||||||++++++|+++||+|..+.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~   31 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLV   31 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEE
Confidence            5899999999999999999999999998663

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=98.76  E-value=2.9e-09  Score=74.19  Aligned_cols=33  Identities=33%  Similarity=0.492  Sum_probs=30.1

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ++++|+||||+||||++++++|+++|++|+.++
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~v   42 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTA   42 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEe
Confidence            478999999999999999999999999997653

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.73  E-value=3.6e-09  Score=72.55  Aligned_cols=30  Identities=40%  Similarity=0.399  Sum_probs=28.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+++|||||||||+|+++.|+++||+|+.+
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~   31 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGL   31 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEE
Confidence            679999999999999999999999999865

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=98.73  E-value=3.6e-09  Score=71.88  Aligned_cols=29  Identities=34%  Similarity=0.512  Sum_probs=27.4

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +|||||||||||++++++|+++|++|+.+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~i   30 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVF   30 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEE
Confidence            69999999999999999999999999875

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.73  E-value=4e-09  Score=73.49  Aligned_cols=32  Identities=25%  Similarity=0.396  Sum_probs=29.6

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|+|+|||||||||++++++|+++||+|..+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~   45 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIAS   45 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEE
Confidence            56889999999999999999999999999865

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=5.5e-09  Score=72.31  Aligned_cols=30  Identities=30%  Similarity=0.510  Sum_probs=28.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|+|||||||||++++++|+++|++|..+
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~l   32 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVI   32 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEE
Confidence            689999999999999999999999999775

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.68  E-value=6.8e-09  Score=68.66  Aligned_cols=31  Identities=23%  Similarity=0.434  Sum_probs=28.7

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++|+|||||||+|+++++.|+++|++|..+
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l   33 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLL   33 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEE
Confidence            4789999999999999999999999999865

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=6e-09  Score=71.74  Aligned_cols=30  Identities=40%  Similarity=0.451  Sum_probs=27.5

Q ss_pred             ceE-EEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTV-FITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~v-litGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+| ||||||||||++++++|+++||+|+.+
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i   31 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGI   31 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEE
Confidence            457 999999999999999999999999865

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.67  E-value=6.3e-09  Score=72.30  Aligned_cols=31  Identities=26%  Similarity=0.492  Sum_probs=28.3

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .|+|||||||||||++++++|+++|++|+.+
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~   32 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVT   32 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEE
Confidence            3789999999999999999999999998765

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.65  E-value=1.1e-08  Score=65.39  Aligned_cols=31  Identities=29%  Similarity=0.433  Sum_probs=27.6

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++|+|||||||+|++++++|+++|++|..+
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~   33 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAK   33 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCcEEEE
Confidence            4789999999999999999999999886543

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=98.65  E-value=9.1e-09  Score=71.38  Aligned_cols=30  Identities=30%  Similarity=0.558  Sum_probs=28.0

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|+|||||||||+++++.|+++|++|+.+
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~   30 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIIL   30 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEE
Confidence            579999999999999999999999999765

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.65  E-value=9.1e-09  Score=71.48  Aligned_cols=30  Identities=27%  Similarity=0.471  Sum_probs=28.0

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |.|+|||||||||++++++|+++|++|+.+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~   31 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVA   31 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEE
Confidence            579999999999999999999999999775

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.65  E-value=1e-08  Score=70.98  Aligned_cols=33  Identities=36%  Similarity=0.607  Sum_probs=29.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.|++||||||||||++++++|++.|++|..+
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~   46 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGL   46 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEE
Confidence            345789999999999999999999999999875

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=1.1e-08  Score=70.59  Aligned_cols=30  Identities=33%  Similarity=0.605  Sum_probs=28.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|+||||+||+|++++++|+++|++|..+
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~   31 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVV   31 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEE
Confidence            689999999999999999999999999875

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=98.62  E-value=1.2e-08  Score=71.63  Aligned_cols=30  Identities=37%  Similarity=0.419  Sum_probs=27.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |.+||||||||||++++++|++.|++|..+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~   31 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGI   31 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEE
Confidence            678999999999999999999999998754

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=98.60  E-value=9.2e-09  Score=68.49  Aligned_cols=30  Identities=27%  Similarity=0.396  Sum_probs=27.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|+|||||||||++++++|.++||+|..+
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~   31 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPT   31 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEe
Confidence            679999999999999999999999998754

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=98.59  E-value=2.1e-08  Score=67.04  Aligned_cols=30  Identities=27%  Similarity=0.476  Sum_probs=27.9

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|+|||||||+|++++++|+++|++|+.+
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~   33 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVL   33 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEE
Confidence            569999999999999999999999999865

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=98.58  E-value=2e-08  Score=70.51  Aligned_cols=31  Identities=29%  Similarity=0.588  Sum_probs=27.5

Q ss_pred             cceEEEeccCcchHHHHHHHHHH-cCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLR-CCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~-~g~~V~~I   82 (84)
                      .|+|+|||||||||++++++|++ .+++|+.+
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~   33 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIV   33 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEE
Confidence            47899999999999999999986 68888765

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=98.55  E-value=1.5e-08  Score=69.00  Aligned_cols=29  Identities=34%  Similarity=0.469  Sum_probs=26.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      |+|+|||||||||++|+++|+++|+.|..
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~   31 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELV   31 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEE
Confidence            68999999999999999999999987653

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=3.3e-08  Score=64.57  Aligned_cols=32  Identities=22%  Similarity=0.239  Sum_probs=29.2

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..++|+|||||||+|++++++|+++|++|+.+
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~   33 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVL   33 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEE
Confidence            45789999999999999999999999998765

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=98.53  E-value=3.2e-08  Score=68.14  Aligned_cols=30  Identities=40%  Similarity=0.661  Sum_probs=26.1

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCC-ceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCP-QMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~-~V~~I   82 (84)
                      |+|||||||||||++++++|+++|+ +|..+
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~l   31 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGL   31 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            5799999999999999999999884 66554

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.53  E-value=2.9e-08  Score=66.14  Aligned_cols=28  Identities=32%  Similarity=0.573  Sum_probs=25.1

Q ss_pred             EEEeccCcchHHHHHHHHHHcCC-ceEEE
Q psy8179          55 VFITGATGFLGSLLVEKLLRCCP-QMLSL   82 (84)
Q Consensus        55 vlitGatGfiG~~l~~~ll~~g~-~V~~I   82 (84)
                      |+|||||||||++++++|+++|+ +|..+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~   30 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVV   30 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEE
Confidence            89999999999999999999996 56654

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.50  E-value=4.3e-08  Score=69.00  Aligned_cols=29  Identities=28%  Similarity=0.638  Sum_probs=26.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      |+|+|||||||||++++++|++.|++|..
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~   29 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVV   29 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEE
Confidence            57999999999999999999999998643

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.49  E-value=4.9e-08  Score=63.54  Aligned_cols=29  Identities=28%  Similarity=0.466  Sum_probs=25.8

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQML   80 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~   80 (84)
                      .|+|+|||||||+|++++++|+++++.++
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~   30 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAK   30 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEE
Confidence            47899999999999999999999987543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.49  E-value=4.6e-08  Score=67.75  Aligned_cols=31  Identities=23%  Similarity=0.293  Sum_probs=29.0

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .|+|+|||||||+|++++++|+++||+|+.+
T Consensus         3 kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l   33 (350)
T d1xgka_           3 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQ   33 (350)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCChHHHHHHHHHHHhCCCeEEEE
Confidence            4789999999999999999999999999876

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=5.8e-08  Score=64.57  Aligned_cols=32  Identities=28%  Similarity=0.502  Sum_probs=27.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCC--ceEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCP--QMLS   81 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~--~V~~   81 (84)
                      ++.++|+|||||||+|++++++|+++|+  +|..
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~   45 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTL   45 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEE
Confidence            4568899999999999999999999974  4544

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=98.45  E-value=4.2e-08  Score=67.37  Aligned_cols=28  Identities=32%  Similarity=0.571  Sum_probs=25.7

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQML   80 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~   80 (84)
                      |+|+|||||||||++++++|+++|++|.
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~   28 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDV   28 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCcc
Confidence            5799999999999999999999998763

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=98.33  E-value=8.8e-08  Score=63.62  Aligned_cols=27  Identities=22%  Similarity=0.287  Sum_probs=24.0

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCce
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQM   79 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V   79 (84)
                      |+|+|||||||||+++++.|.+.|+.|
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v   27 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLI   27 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEE
Confidence            579999999999999999999987543

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.79  E-value=9e-06  Score=55.30  Aligned_cols=36  Identities=22%  Similarity=0.237  Sum_probs=33.0

Q ss_pred             hhhccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          48 EFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        48 ~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ..+++|+++||||+|-||+.++++|+++|++|..++
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~   56 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIAS   56 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEE
Confidence            458899999999999999999999999999998765

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.74  E-value=1.4e-05  Score=51.86  Aligned_cols=34  Identities=15%  Similarity=0.087  Sum_probs=31.0

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+++|+++||||+|.||+.+++.|.+.|.+|..+
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~   53 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLC   53 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhc
Confidence            4578999999999999999999999999988664

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=3.2e-05  Score=51.28  Aligned_cols=35  Identities=26%  Similarity=0.225  Sum_probs=31.8

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+++|.++||||++-||+.++++|.++|++|..++
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~   36 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLD   36 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence            36789999999999999999999999999987664

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.50  E-value=5.2e-05  Score=51.27  Aligned_cols=34  Identities=24%  Similarity=0.341  Sum_probs=31.3

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|+++||||++-||+.++++|+++|++|..++
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~i~~   37 (258)
T d1ae1a_           4 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCS   37 (258)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            5789999999999999999999999999987664

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=97.50  E-value=5.7e-05  Score=50.56  Aligned_cols=34  Identities=18%  Similarity=0.365  Sum_probs=31.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|.++||||++-||+.++++|+++|++|...+
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~   36 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVD   36 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            5789999999999999999999999999997654

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=5.2e-05  Score=50.86  Aligned_cols=34  Identities=12%  Similarity=0.189  Sum_probs=31.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|+++||||++-||+.+++.|+++|++|..++
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~   37 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATD   37 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEe
Confidence            6789999999999999999999999999998765

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=97.47  E-value=3.5e-05  Score=51.94  Aligned_cols=35  Identities=11%  Similarity=0.248  Sum_probs=31.7

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+++|+++||||++-||+.++++|++.|++|..++
T Consensus         6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~   40 (260)
T d1h5qa_           6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIY   40 (260)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEE
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            36789999999999999999999999999987654

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=6e-05  Score=50.50  Aligned_cols=34  Identities=21%  Similarity=0.283  Sum_probs=31.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|+++||||++-||+.++++|+++|++|..+.
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~   38 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVS   38 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEE
Confidence            5789999999999999999999999999987653

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.46  E-value=6.2e-05  Score=49.91  Aligned_cols=33  Identities=24%  Similarity=0.268  Sum_probs=29.9

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ++|+|+||||+|-||+.++++|.++|++|..+.
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~   33 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASID   33 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence            368999999999999999999999999987653

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.46  E-value=8.1e-05  Score=50.19  Aligned_cols=38  Identities=16%  Similarity=0.119  Sum_probs=33.3

Q ss_pred             hhhhhccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          46 IQEFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        46 ~~~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ....+++|+++||||++=||+.++++|+++|++|...+
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~   49 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNY   49 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEe
Confidence            34457899999999999999999999999999987654

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=6.9e-05  Score=50.56  Aligned_cols=36  Identities=19%  Similarity=0.320  Sum_probs=32.1

Q ss_pred             hhhccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          48 EFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        48 ~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ..+++|+++||||++=||..++++|+++|++|..+.
T Consensus        10 ~~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~   45 (269)
T d1xu9a_          10 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTA   45 (269)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEE
Confidence            347899999999999999999999999999987653

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=8.2e-05  Score=50.17  Aligned_cols=35  Identities=20%  Similarity=0.412  Sum_probs=31.6

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+++|.++||||++=||+++++.|+++|++|...+
T Consensus         7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~   41 (257)
T d1xg5a_           7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCA   41 (257)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            47899999999999999999999999999986653

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=97.43  E-value=7.5e-05  Score=49.42  Aligned_cols=35  Identities=11%  Similarity=0.226  Sum_probs=31.0

Q ss_pred             hhccceEEEeccCc--chHHHHHHHHHHcCCceEEEE
Q psy8179          49 FYKDQTVFITGATG--FLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        49 ~~~~~~vlitGatG--fiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+++|+++||||+|  =||+.+++.|+++|++|...+
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~   38 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTY   38 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEE
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEe
Confidence            36789999999999  688999999999999998665

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.43  E-value=7.5e-05  Score=48.56  Aligned_cols=32  Identities=19%  Similarity=0.239  Sum_probs=29.2

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +|+++||||++-||+.++++|+++|++|..++
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~   32 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLD   32 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            47899999999999999999999999987664

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.43  E-value=7e-05  Score=50.18  Aligned_cols=34  Identities=18%  Similarity=0.280  Sum_probs=31.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|+++||||++-||+.++++|++.|++|..++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~Ga~V~~~~   36 (242)
T d1cyda_           3 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVT   36 (242)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEE
Confidence            5789999999999999999999999999987654

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.43  E-value=5.5e-05  Score=50.82  Aligned_cols=35  Identities=17%  Similarity=0.074  Sum_probs=31.3

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+.+|+++||||++=||+++++.|+++|++|...+
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~   37 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNY   37 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEc
Confidence            36789999999999999999999999999987543

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=97.42  E-value=8e-05  Score=49.66  Aligned_cols=35  Identities=11%  Similarity=0.132  Sum_probs=31.2

Q ss_pred             hhccceEEEeccCc--chHHHHHHHHHHcCCceEEEE
Q psy8179          49 FYKDQTVFITGATG--FLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        49 ~~~~~~vlitGatG--fiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ++++|+++||||+|  -||..++++|+++|++|..++
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~   38 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTY   38 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEE
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence            36789999999987  699999999999999998765

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.39  E-value=6.3e-05  Score=50.36  Aligned_cols=34  Identities=15%  Similarity=0.284  Sum_probs=31.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|+++||||++-||+.++++|++.|++|..++
T Consensus         5 l~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~   38 (237)
T d1uzma1           5 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTH   38 (237)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            6789999999999999999999999999987664

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.39  E-value=8.2e-05  Score=50.41  Aligned_cols=35  Identities=17%  Similarity=0.163  Sum_probs=32.0

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+++|.++||||++-||+.++++|+++|++|...+
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~   38 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNY   38 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence            47889999999999999999999999999987654

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.39  E-value=9.1e-05  Score=49.15  Aligned_cols=34  Identities=15%  Similarity=0.200  Sum_probs=30.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|+++||||++=||+.+++.|+++|++|..++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~   35 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICA   35 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEE
Confidence            4679999999999999999999999999987653

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.38  E-value=9e-05  Score=49.88  Aligned_cols=34  Identities=15%  Similarity=0.209  Sum_probs=31.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|+++||||++-||+.++++|++.|++|..++
T Consensus         3 l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~   36 (251)
T d1vl8a_           3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVAS   36 (251)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            5789999999999999999999999999987654

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.34  E-value=9e-05  Score=49.65  Aligned_cols=33  Identities=18%  Similarity=0.377  Sum_probs=30.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++|+++||||++-||+.++++|+++|++|...
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~   34 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGT   34 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEE
Confidence            578999999999999999999999999998654

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.33  E-value=0.00012  Score=49.26  Aligned_cols=34  Identities=9%  Similarity=0.164  Sum_probs=30.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|.++||||++-||+.+++.|+++|++|...+
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~   37 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGD   37 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            5789999999999999999999999999987654

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.32  E-value=0.00012  Score=49.72  Aligned_cols=34  Identities=29%  Similarity=0.447  Sum_probs=31.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|+++||||++-||+.++++|+++|++|..++
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~   36 (276)
T d1bdba_           3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLD   36 (276)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            5689999999999999999999999999987654

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.30  E-value=0.00013  Score=47.85  Aligned_cols=31  Identities=16%  Similarity=0.250  Sum_probs=28.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      |.|+||||++-||+.++++|+++|++|..++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~   32 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGID   32 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            5789999999999999999999999987664

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.30  E-value=0.0001  Score=49.55  Aligned_cols=34  Identities=21%  Similarity=0.286  Sum_probs=30.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|+++||||++-||+.+++.|+++|++|..++
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~   36 (256)
T d1k2wa_           3 LDGKTALITGSARGIGRAFAEAYVREGARVAIAD   36 (256)
T ss_dssp             TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            5689999999999999999999999999987654

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.29  E-value=0.00014  Score=48.86  Aligned_cols=34  Identities=15%  Similarity=0.253  Sum_probs=31.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|.++||||++=||+.+++.|+++|++|...+
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~   36 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCD   36 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            5789999999999999999999999999987654

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.29  E-value=0.00014  Score=48.76  Aligned_cols=34  Identities=21%  Similarity=0.275  Sum_probs=31.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|.++||||++-||+.+++.|++.|++|...+
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~   36 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIAD   36 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            6789999999999999999999999999987654

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.27  E-value=0.00015  Score=48.44  Aligned_cols=34  Identities=26%  Similarity=0.385  Sum_probs=30.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|.++||||++=||+.++++|++.|++|..++
T Consensus         3 L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~   36 (242)
T d1ulsa_           3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACD   36 (242)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            5789999999999999999999999999987654

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.26  E-value=9.5e-05  Score=49.69  Aligned_cols=34  Identities=18%  Similarity=0.183  Sum_probs=30.8

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|.++||||++=||+.++++|+++|++|..++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~   35 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNG   35 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEC
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence            5789999999999999999999999999987653

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.26  E-value=0.00015  Score=48.84  Aligned_cols=34  Identities=21%  Similarity=0.318  Sum_probs=31.1

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|.++||||++-||+.+++.|+++|++|..+.
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~   36 (260)
T d1zema1           3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLD   36 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            6789999999999999999999999999987654

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.25  E-value=0.00014  Score=44.40  Aligned_cols=30  Identities=27%  Similarity=0.262  Sum_probs=27.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|.|+||+|-+|+.+.+.|.++|++|...
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~   30 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVG   30 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEE
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEE
Confidence            578899999999999999999999999754

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.24  E-value=0.00015  Score=49.03  Aligned_cols=35  Identities=20%  Similarity=0.210  Sum_probs=31.4

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+++|+++||||++=||+.++++|+++|++|...+
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~   36 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLAD   36 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEE
Confidence            36789999999999999999999999999987654

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.23  E-value=0.00018  Score=48.44  Aligned_cols=33  Identities=15%  Similarity=0.210  Sum_probs=30.5

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++|.++||||++=||..++++|+++|++|..+
T Consensus         3 l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~   35 (254)
T d1sbya1           3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVI   35 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEE
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE
Confidence            578999999999999999999999999998765

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.23  E-value=0.00013  Score=49.43  Aligned_cols=34  Identities=18%  Similarity=0.230  Sum_probs=30.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|+++||||++=||+.++++|++.|++|..++
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~   35 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITG   35 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEE
Confidence            4689999999999999999999999999987654

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.22  E-value=0.00018  Score=48.48  Aligned_cols=35  Identities=20%  Similarity=0.338  Sum_probs=31.6

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+++|.++||||++=||..++++|+++|++|..++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~   37 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIAD   37 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEE
Confidence            36789999999999999999999999999987654

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.00019  Score=48.10  Aligned_cols=33  Identities=21%  Similarity=0.298  Sum_probs=30.3

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ++|.++||||++=||+.++++|+++|++|..++
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~   34 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVD   34 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            579999999999999999999999999987654

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.21  E-value=0.00015  Score=48.98  Aligned_cols=34  Identities=18%  Similarity=0.228  Sum_probs=31.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|+++||||++=||+.++++|.++|++|..++
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~   36 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITG   36 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEE
Confidence            6789999999999999999999999999987654

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.20  E-value=0.00015  Score=48.61  Aligned_cols=34  Identities=18%  Similarity=0.228  Sum_probs=31.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|.++||||++=||+.++++|++.|++|..++
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~   37 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITG   37 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            6789999999999999999999999999987654

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.20  E-value=0.00013  Score=49.09  Aligned_cols=34  Identities=15%  Similarity=0.188  Sum_probs=31.2

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|+++||||++=||+.++++|++.|++|...+
T Consensus         9 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~   42 (255)
T d1fmca_           9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSD   42 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEE
Confidence            5789999999999999999999999999987654

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.20  E-value=0.0002  Score=47.61  Aligned_cols=35  Identities=17%  Similarity=0.179  Sum_probs=30.2

Q ss_pred             hhccceEEEeccCc--chHHHHHHHHHHcCCceEEEE
Q psy8179          49 FYKDQTVFITGATG--FLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        49 ~~~~~~vlitGatG--fiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+++|+++||||+|  =||+.++++|++.|++|...+
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~   41 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSY   41 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEe
Confidence            36789999999997  499999999999999986543

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.20  E-value=0.00019  Score=48.34  Aligned_cols=34  Identities=21%  Similarity=0.262  Sum_probs=31.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|.++||||++=||+.++++|+++|++|...+
T Consensus         6 L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~   39 (259)
T d2ae2a_           6 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCS   39 (259)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            5789999999999999999999999999987654

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=0.00022  Score=48.03  Aligned_cols=34  Identities=18%  Similarity=0.335  Sum_probs=30.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|+++||||++-||+.+++.|+++|++|....
T Consensus         4 l~GK~alITGas~GIG~aia~~la~~Ga~V~i~~   37 (250)
T d1ydea1           4 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICD   37 (250)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            5789999999999999999999999999987653

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=97.18  E-value=0.00022  Score=47.15  Aligned_cols=35  Identities=6%  Similarity=0.096  Sum_probs=30.0

Q ss_pred             hhccceEEEeccCcc--hHHHHHHHHHHcCCceEEEE
Q psy8179          49 FYKDQTVFITGATGF--LGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        49 ~~~~~~vlitGatGf--iG~~l~~~ll~~g~~V~~I~   83 (84)
                      ++++|+++||||+|.  ||..++++|.++|++|...+
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~   39 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTG   39 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEe
Confidence            467899999997764  99999999999999987654

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.18  E-value=0.00017  Score=46.26  Aligned_cols=30  Identities=33%  Similarity=0.519  Sum_probs=25.1

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ++|.|.|||||+|..+++.|.++ +++...+
T Consensus         2 ikVaIiGATGyvG~eLlrlL~~H-P~~ei~~   31 (179)
T d2g17a1           2 LNTLIVGASGYAGAELVSYVNRH-PHMTITA   31 (179)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHC-TTEEEEE
T ss_pred             cEEEEECcccHHHHHHHHHHHhC-CCCceEe
Confidence            57999999999999999998886 6765543

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=0.00022  Score=49.13  Aligned_cols=35  Identities=20%  Similarity=0.358  Sum_probs=31.8

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+++|.++||||++=||+.+++.|++.|++|..++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~   43 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIAS   43 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            46889999999999999999999999999987654

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.14  E-value=0.0002  Score=48.15  Aligned_cols=34  Identities=15%  Similarity=0.219  Sum_probs=31.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|.++||||++=||+.++++|+++|++|..++
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~   36 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITG   36 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEE
Confidence            5789999999999999999999999999987653

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.13  E-value=0.00019  Score=48.44  Aligned_cols=34  Identities=26%  Similarity=0.354  Sum_probs=30.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|+++||||++=||..++++|++.|++|..+.
T Consensus         6 LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~   39 (259)
T d1xq1a_           6 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCA   39 (259)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            5789999999999999999999999999887653

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.11  E-value=0.00026  Score=47.66  Aligned_cols=34  Identities=24%  Similarity=0.319  Sum_probs=30.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|.++||||++=||+.++++|+++|++|..++
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~   35 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVD   35 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            5689999999999999999999999999987654

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.08  E-value=0.00028  Score=43.24  Aligned_cols=30  Identities=17%  Similarity=0.314  Sum_probs=26.4

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .|+|+|.|| |++|+++++.|.++|++|..+
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~   31 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVA   31 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEE
Confidence            478999876 999999999999999998654

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.07  E-value=0.00023  Score=47.79  Aligned_cols=35  Identities=20%  Similarity=0.242  Sum_probs=31.3

Q ss_pred             hhhccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          48 EFYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        48 ~~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +...++.++||||++=||+.++++|+++|++|..+
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~   37 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLW   37 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            34678999999999999999999999999988654

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.06  E-value=0.00025  Score=47.55  Aligned_cols=34  Identities=15%  Similarity=0.332  Sum_probs=30.6

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++|.++||||++=||+.++++|++.|++|..++
T Consensus         8 lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~   41 (251)
T d2c07a1           8 GENKVALVTGAGRGIGREIAKMLAKSVSHVICIS   41 (251)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEE
Confidence            4689999999999999999999999999987653

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.05  E-value=0.00022  Score=47.93  Aligned_cols=33  Identities=18%  Similarity=0.212  Sum_probs=30.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++|.++||||++=||+.+++.|+++|++|...
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~   36 (253)
T d1hxha_           4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFS   36 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            678999999999999999999999999998654

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.04  E-value=0.00021  Score=46.21  Aligned_cols=32  Identities=25%  Similarity=0.425  Sum_probs=27.0

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +..+|.|.|||||+|..+++.|.++ +.+...+
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~H-P~~ei~~   35 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANH-PQFRIKV   35 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTC-SSEEEEE
T ss_pred             CccEEEEECcccHHHHHHHHHHHhC-CCceEEE
Confidence            4467999999999999999999987 7776554

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=97.02  E-value=0.00039  Score=46.52  Aligned_cols=35  Identities=17%  Similarity=0.207  Sum_probs=30.5

Q ss_pred             hhccceEEEeccCc--chHHHHHHHHHHcCCceEEEE
Q psy8179          49 FYKDQTVFITGATG--FLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        49 ~~~~~~vlitGatG--fiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+++|+++||||+|  =||..+++.|+++|.+|...+
T Consensus         5 ~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~   41 (297)
T d1d7oa_           5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGT   41 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEe
Confidence            36789999999987  699999999999999986543

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.96  E-value=0.00031  Score=46.21  Aligned_cols=30  Identities=27%  Similarity=0.420  Sum_probs=27.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+|+||||+|=||+.++++|.++|++|..+
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~   32 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNI   32 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            468999999999999999999999998765

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.91  E-value=0.00034  Score=48.27  Aligned_cols=33  Identities=21%  Similarity=0.291  Sum_probs=30.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++|.++||||++=||+.++++|+++|++|...
T Consensus         5 l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~   37 (302)
T d1gz6a_           5 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVN   37 (302)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEE
Confidence            578999999999999999999999999998754

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.88  E-value=0.00058  Score=45.59  Aligned_cols=32  Identities=19%  Similarity=0.253  Sum_probs=28.9

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +|.++||||++=||+.++++|+++|++|..+.
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~   33 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCA   33 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            67889999999999999999999999987653

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.88  E-value=0.00046  Score=44.86  Aligned_cols=30  Identities=33%  Similarity=0.313  Sum_probs=25.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ++|.|.|||||+|..+++.|.++ +++..++
T Consensus         2 ikVaIvGATGyvG~eLirlL~~H-P~~ei~~   31 (176)
T d1vkna1           2 IRAGIIGATGYTGLELVRLLKNH-PEAKITY   31 (176)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHC-TTEEEEE
T ss_pred             eEEEEECCCcHHHHHHHHHHHhC-CCceEEE
Confidence            47999999999999999988876 7776654

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.85  E-value=0.0006  Score=41.24  Aligned_cols=29  Identities=21%  Similarity=0.322  Sum_probs=26.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|+|+|+ |.+|+++++.|.+.|++|..|
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vi   29 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLI   29 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCccee
Confidence            57999998 999999999999999998765

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.81  E-value=0.00052  Score=45.43  Aligned_cols=30  Identities=27%  Similarity=0.245  Sum_probs=26.4

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQML   80 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~   80 (84)
                      ..|+|+||||++=||..++++|+++|+.+.
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~   31 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRH   31 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCE
Confidence            458899999999999999999999987543

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=96.79  E-value=0.0008  Score=44.39  Aligned_cols=28  Identities=32%  Similarity=0.389  Sum_probs=25.6

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCce
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQM   79 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V   79 (84)
                      +.+++||||+|-||..++++|.++|+++
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~   36 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPH   36 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSE
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCE
Confidence            4689999999999999999999999863

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.76  E-value=0.00066  Score=42.64  Aligned_cols=29  Identities=28%  Similarity=0.417  Sum_probs=23.0

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +|.|.|||||+|..+++.|.++.+.+..+
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~fp~~~l   31 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTLPIDKI   31 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCSCEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCCCceEE
Confidence            68999999999999999887765344443

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.63  E-value=0.00044  Score=43.29  Aligned_cols=25  Identities=36%  Similarity=0.288  Sum_probs=21.7

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      ++|.|.|||||+|..+++.|.++++
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~h   27 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDF   27 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCC
Confidence            5799999999999999999976543

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.61  E-value=0.00046  Score=43.55  Aligned_cols=23  Identities=30%  Similarity=0.540  Sum_probs=20.5

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC   75 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~   75 (84)
                      ++|.|.|||||+|+.+++.|+++
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~   24 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEE   24 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT
T ss_pred             cEEEEECCccHHHHHHHHHHHhC
Confidence            46899999999999999988875

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=96.49  E-value=0.00073  Score=42.81  Aligned_cols=23  Identities=26%  Similarity=0.511  Sum_probs=20.5

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC   75 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~   75 (84)
                      |+|-|.|||||+|+.+++.|+++
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~   23 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEE   23 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHT
T ss_pred             CEEEEECCccHHHHHHHHHHHhc
Confidence            47899999999999999988864

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.46  E-value=0.0016  Score=43.40  Aligned_cols=31  Identities=16%  Similarity=0.200  Sum_probs=27.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      |.++||||++=||+.++++|+++|++|...+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~   32 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIAD   32 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEE
Confidence            4469999999999999999999999987654

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=96.42  E-value=0.0014  Score=42.74  Aligned_cols=30  Identities=17%  Similarity=0.193  Sum_probs=27.5

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ..+||||++=||+.++++|+++|++|...+
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~   32 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHY   32 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            469999999999999999999999988765

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.42  E-value=0.0014  Score=43.57  Aligned_cols=31  Identities=23%  Similarity=0.224  Sum_probs=27.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.++||||++=||+.++++|+++|++|...+
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~   32 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNY   32 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence            3689999999999999999999999986543

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.20  E-value=0.0022  Score=42.51  Aligned_cols=34  Identities=26%  Similarity=0.186  Sum_probs=29.3

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHH---cCCceEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLR---CCPQMLSL   82 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~---~g~~V~~I   82 (84)
                      .+++|.++||||++=||..++++|.+   +|++|..+
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~   39 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVS   39 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEE
Confidence            35789999999999999999999975   78887755

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.15  E-value=0.002  Score=43.65  Aligned_cols=31  Identities=26%  Similarity=0.282  Sum_probs=27.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      |.++||||++=||+.++++|.+.|.+|..|+
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~   33 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVY   33 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEE
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEE
Confidence            5678999999999999999999999877664

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.04  E-value=0.0034  Score=38.31  Aligned_cols=31  Identities=26%  Similarity=0.294  Sum_probs=28.0

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++|.|.||.|.+|+.+++.|.++||+|...
T Consensus         9 ~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~   39 (152)
T d2pv7a2           9 IHKIVIVGGYGKLGGLFARYLRASGYPISIL   39 (152)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEE
T ss_pred             CCeEEEEcCCCHHHHHHHHHHHHcCCCcEec
Confidence            4689999999999999999999999998753

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.01  E-value=0.0038  Score=37.88  Aligned_cols=29  Identities=21%  Similarity=0.343  Sum_probs=26.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|.|.|+ |.+|+.+...|.+.|++|..+
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~   29 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGW   29 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEE
Confidence            57999988 999999999999999998764

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=95.96  E-value=0.0034  Score=41.35  Aligned_cols=31  Identities=23%  Similarity=0.153  Sum_probs=27.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ..++||||++=||+.++++|+++|++|...+
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~   33 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHY   33 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEe
Confidence            3568999999999999999999999987654

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.87  E-value=0.0037  Score=41.08  Aligned_cols=31  Identities=29%  Similarity=0.352  Sum_probs=25.8

Q ss_pred             cceEEEeccCcchHHHHHHHHHH---cCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLR---CCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~---~g~~V~~I   82 (84)
                      .|+|+||||++=||..++++|++   +|++|...
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~   35 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTT   35 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEE
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEE
Confidence            46899999999999999999974   67776543

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.82  E-value=0.0028  Score=42.04  Aligned_cols=29  Identities=17%  Similarity=0.094  Sum_probs=26.4

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+||||++-||..++++|.+.|++|...
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~   30 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACH   30 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            58999999999999999999999988653

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.48  E-value=0.0055  Score=40.78  Aligned_cols=30  Identities=23%  Similarity=0.332  Sum_probs=25.4

Q ss_pred             cceE-EEeccCcchHHHHHHHHHHc-CCceEE
Q psy8179          52 DQTV-FITGATGFLGSLLVEKLLRC-CPQMLS   81 (84)
Q Consensus        52 ~~~v-litGatGfiG~~l~~~ll~~-g~~V~~   81 (84)
                      +++| +||||++=||..++++|++. |++|..
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~   33 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVL   33 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEE
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEE
Confidence            5666 89999999999999999986 777654

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.35  E-value=0.011  Score=33.37  Aligned_cols=32  Identities=31%  Similarity=0.443  Sum_probs=28.3

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++.+|+|+||+|-+|+..++.+...|.+|..+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~   62 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAV   62 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEE
Confidence            45789999999999999999988899988764

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=95.22  E-value=0.0098  Score=35.27  Aligned_cols=29  Identities=24%  Similarity=0.450  Sum_probs=24.9

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+++|.|. |-+|+++++.|.+.|++|..|
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvi   29 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAV   29 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEe
Confidence            45778866 899999999999999998765

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=94.93  E-value=0.013  Score=38.50  Aligned_cols=25  Identities=24%  Similarity=0.367  Sum_probs=23.4

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCc
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQ   78 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~   78 (84)
                      .++||||++=||+.++++|.++|++
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~   27 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARH   27 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTT
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCcc
Confidence            4799999999999999999999987

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=94.84  E-value=0.0079  Score=37.36  Aligned_cols=25  Identities=28%  Similarity=0.320  Sum_probs=21.9

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcC
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCC   76 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g   76 (84)
                      .++|.|+||+|++|++++..|....
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~   28 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGE   28 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcc
Confidence            4589999999999999999988753

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.48  E-value=0.02  Score=34.83  Aligned_cols=32  Identities=22%  Similarity=0.360  Sum_probs=29.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +++++|+|.|| |.+|..-++.|++.|.+|+.|
T Consensus        11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVv   42 (150)
T d1kyqa1          11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLV   42 (150)
T ss_dssp             CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEE
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEE
Confidence            57899999998 889999999999999988776

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=94.41  E-value=0.027  Score=38.32  Aligned_cols=33  Identities=18%  Similarity=0.200  Sum_probs=27.9

Q ss_pred             ccceEEEec--cCcchHHHHHHHHHHcCCceEEEE
Q psy8179          51 KDQTVFITG--ATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        51 ~~~~vlitG--atGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +++..+|||  ++.=||..+++.|.++|.+|...+
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~   35 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGI   35 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEe
Confidence            467899999  556899999999999999987653

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=94.39  E-value=0.014  Score=37.39  Aligned_cols=25  Identities=28%  Similarity=0.392  Sum_probs=21.7

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHc
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRC   75 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~   75 (84)
                      +..+|.|+||+|.||++++..|.+.
T Consensus        23 ~~~kV~I~GA~G~Ig~~l~~~La~g   47 (175)
T d7mdha1          23 KLVNIAVSGAAGMISNHLLFKLASG   47 (175)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHT
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcC
Confidence            3457999999999999999998873

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=94.25  E-value=0.03  Score=36.92  Aligned_cols=35  Identities=17%  Similarity=0.215  Sum_probs=29.6

Q ss_pred             hhccceEEEec----------------cCcchHHHHHHHHHHcCCceEEEE
Q psy8179          49 FYKDQTVFITG----------------ATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        49 ~~~~~~vlitG----------------atGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+.+++|+||+                +||-.|..|++.+...|++|..|+
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~   53 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVS   53 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhh
Confidence            35567777775                689999999999999999999886

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.35  E-value=0.015  Score=36.05  Aligned_cols=24  Identities=25%  Similarity=0.293  Sum_probs=20.9

Q ss_pred             cceEEEeccCcchHHHHHHHHHHc
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRC   75 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~   75 (84)
                      .++|.|+||+|.+|++++..|++.
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~   26 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNG   26 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTT
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHH
Confidence            357999999999999999988754

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=93.01  E-value=0.06  Score=32.76  Aligned_cols=28  Identities=21%  Similarity=0.379  Sum_probs=23.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      |+|.|.| .|.+|+.+++.|.++|++|..
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~   28 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRGHYLIG   28 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCEEEE
Confidence            4677775 599999999999999998864

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.99  E-value=0.06  Score=34.29  Aligned_cols=30  Identities=13%  Similarity=0.259  Sum_probs=26.4

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      -++|.|.|+ |.+|+.++..++..|++|..+
T Consensus         4 IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~   33 (192)
T d1f0ya2           4 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLV   33 (192)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEE
T ss_pred             eEEEEEECc-CHHHHHHHHHHHhCCCcEEEE
Confidence            467899988 999999999999999998753

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=92.81  E-value=0.066  Score=32.48  Aligned_cols=29  Identities=21%  Similarity=0.162  Sum_probs=25.5

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|.|.|+ |.+|..+...|.++|++|..+
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~   30 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAW   30 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEE
Confidence            57888887 999999999999999998743

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.79  E-value=0.04  Score=34.06  Aligned_cols=23  Identities=30%  Similarity=0.290  Sum_probs=19.8

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC   75 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~   75 (84)
                      ++|.|.|++|.+|++++..|..+
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~   23 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQ   23 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHH
T ss_pred             CEEEEEcCCChHHHHHHHHHHhC
Confidence            57899999999999999887654

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.77  E-value=0.076  Score=32.60  Aligned_cols=32  Identities=19%  Similarity=0.260  Sum_probs=27.5

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|+||+|-+|...++.+...|.+|..+
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~   59 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGT   59 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEEeccccccccccccccccCcccccc
Confidence            45689999999999999999998888887654

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.73  E-value=0.04  Score=34.07  Aligned_cols=24  Identities=33%  Similarity=0.283  Sum_probs=21.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcC
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCC   76 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g   76 (84)
                      |+|.|.||+|.+|+.++..+..++
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~   24 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEP   24 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCC
Confidence            468999999999999999988876

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=92.70  E-value=0.054  Score=33.93  Aligned_cols=24  Identities=33%  Similarity=0.455  Sum_probs=20.7

Q ss_pred             cceEEEeccCcchHHHHHHHHHHc
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRC   75 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~   75 (84)
                      .++|.|.|+||.||.+.++-+.+.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~   25 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERN   25 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcC
Confidence            478999999999999988877664

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=92.34  E-value=0.071  Score=32.88  Aligned_cols=29  Identities=21%  Similarity=0.276  Sum_probs=25.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|+|.|| |.-|-..+..|.++|++|..+
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vl   29 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLL   29 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEE
Confidence            46888887 999999999999999998754

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=92.30  E-value=0.07  Score=33.71  Aligned_cols=30  Identities=17%  Similarity=0.185  Sum_probs=26.0

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      -++|.|.|+ |.+|+.++..++..|++|..+
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~   33 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMK   33 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEE
Confidence            356888888 999999999999999998753

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.21  E-value=0.092  Score=33.25  Aligned_cols=29  Identities=14%  Similarity=0.259  Sum_probs=24.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|.|. |.||+|..++..|.+.|++|..+
T Consensus         1 MkI~Vi-GlG~vGl~~a~~la~~g~~V~g~   29 (202)
T d1mv8a2           1 MRISIF-GLGYVGAVCAGCLSARGHEVIGV   29 (202)
T ss_dssp             CEEEEE-CCSTTHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEE-CCCHhHHHHHHHHHhCCCcEEEE
Confidence            456666 89999999999999999998754

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.08  E-value=0.089  Score=32.97  Aligned_cols=23  Identities=22%  Similarity=0.365  Sum_probs=20.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHc
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRC   75 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~   75 (84)
                      ++|.|.|+||.||.+.+.-+.+.
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~   24 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHN   24 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHC
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhC
Confidence            57999999999999999877665

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.81  E-value=0.067  Score=32.91  Aligned_cols=24  Identities=29%  Similarity=0.240  Sum_probs=21.0

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCC
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      +|.|.||+|.+|++++..|..++.
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~   25 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPL   25 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTT
T ss_pred             eEEEECCCChHHHHHHHHHHhCCc
Confidence            588999999999999998887753

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=91.74  E-value=0.097  Score=32.37  Aligned_cols=32  Identities=19%  Similarity=0.233  Sum_probs=28.1

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|+||+|-+|...++.....|.+|..+
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~   60 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGA   60 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEe
Confidence            46789999999999999999999999887654

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=91.20  E-value=0.13  Score=28.77  Aligned_cols=32  Identities=25%  Similarity=0.252  Sum_probs=26.9

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      .+++++|+|.|. |--|..+++.|.++|.+|..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~   33 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRV   33 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEE
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEE
Confidence            367889999988 55699999999999998865

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.17  E-value=0.11  Score=31.78  Aligned_cols=31  Identities=23%  Similarity=0.216  Sum_probs=27.1

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+|+|+||+|-+|...++.+...|.+|..+
T Consensus        26 g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~   56 (183)
T d1pqwa_          26 GERVLIHSATGGVGMAAVSIAKMIGARIYTT   56 (183)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCEEEEECCCCCcccccchhhccccccceee
Confidence            5689999999999999999998888877654

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=91.00  E-value=0.14  Score=31.94  Aligned_cols=31  Identities=29%  Similarity=0.401  Sum_probs=27.2

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+|+|+||+|=+|...++.....|.+|..+
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat   54 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVAS   54 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEE
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEE
Confidence            4579999999999999999988899888754

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=90.99  E-value=0.13  Score=31.68  Aligned_cols=32  Identities=22%  Similarity=0.298  Sum_probs=27.4

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|+||+|-+|...++.+...|.+|..+
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~   58 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAA   58 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccc
Confidence            45789999999999999999988888877554

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.92  E-value=0.14  Score=30.09  Aligned_cols=30  Identities=17%  Similarity=0.251  Sum_probs=25.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ++++|.| .||+|-.++..|.+.|.+|+.|.
T Consensus        24 ~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~   53 (122)
T d1v59a2          24 KRLTIIG-GGIIGLEMGSVYSRLGSKVTVVE   53 (122)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEC
T ss_pred             CeEEEEC-CCchHHHHHHHHHhhCcceeEEE
Confidence            4666665 69999999999999999998764

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.70  E-value=0.15  Score=29.96  Aligned_cols=30  Identities=13%  Similarity=0.175  Sum_probs=25.5

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ++++|.| .||+|-.++..|.+.|.+|+.++
T Consensus        23 k~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~   52 (125)
T d3grsa2          23 GRSVIVG-AGYIAVEMAGILSALGSKTSLMI   52 (125)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEC
T ss_pred             CEEEEEc-CCccHHHHHHHHhcCCcEEEEEe
Confidence            5677765 58999999999999999998775

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=90.56  E-value=0.16  Score=31.17  Aligned_cols=25  Identities=24%  Similarity=0.320  Sum_probs=21.7

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcC
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCC   76 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g   76 (84)
                      +.++|.|.|+ |++|+.++..|+.++
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~   28 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQG   28 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcC
Confidence            4568999995 999999999999976

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=90.39  E-value=0.16  Score=29.80  Aligned_cols=29  Identities=17%  Similarity=0.237  Sum_probs=23.6

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      +++|+|.| .||.|-.++..|.+.++++..
T Consensus         2 gkrivIvG-gG~~G~e~A~~l~~~~~~~~V   30 (186)
T d1fcda1           2 GRKVVVVG-GGTGGATAAKYIKLADPSIEV   30 (186)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHCTTSEE
T ss_pred             CCcEEEEC-ccHHHHHHHHHHHHcCCCCcE
Confidence            57888886 599999999999998876543

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=90.38  E-value=0.15  Score=31.01  Aligned_cols=31  Identities=13%  Similarity=0.209  Sum_probs=27.3

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+|+|+||+|-+|...++.....|.+|..+
T Consensus        29 g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~   59 (179)
T d1qora2          29 DEQFLFHAAAGGVGLIACQWAKALGAKLIGT   59 (179)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCEEEEEccccccchHHHHHHHHhCCeEeec
Confidence            5689999999999999999988888887655

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=90.13  E-value=0.15  Score=32.03  Aligned_cols=31  Identities=35%  Similarity=0.370  Sum_probs=27.4

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+|+|+||+|=+|+..++.....|.+|..+
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat   62 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEAS   62 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCCceEEe
Confidence            5679999999999999999998889888654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=89.94  E-value=0.17  Score=29.54  Aligned_cols=30  Identities=17%  Similarity=0.307  Sum_probs=25.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ++++|.| .||+|-.++..|.+.|.+|+.|+
T Consensus        23 ~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~   52 (117)
T d1onfa2          23 KKIGIVG-SGYIAVELINVIKRLGIDSYIFA   52 (117)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHTTTCEEEEEC
T ss_pred             CEEEEEC-CchHHHHHHHHHHhccccceeee
Confidence            5666665 69999999999999999998774

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=89.70  E-value=0.2  Score=31.40  Aligned_cols=30  Identities=30%  Similarity=0.403  Sum_probs=26.9

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ..|+|+||+|=+|+..++.....|.+|..+
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~   62 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAV   62 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEE
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEE
Confidence            479999999999999999999999988754

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=89.58  E-value=0.21  Score=30.16  Aligned_cols=27  Identities=33%  Similarity=0.502  Sum_probs=22.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQML   80 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~   80 (84)
                      ++|.|.| .|.+|+.+++.|.+.|+.+.
T Consensus         2 k~I~IIG-~G~mG~sla~~L~~~g~~~~   28 (171)
T d2g5ca2           2 QNVLIVG-VGFMGGSFAKSLRRSGFKGK   28 (171)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCCSE
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhcCCCeE
Confidence            3588886 69999999999999987654

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.12  E-value=0.3  Score=29.28  Aligned_cols=29  Identities=14%  Similarity=0.143  Sum_probs=25.1

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      ++|.|.|++|=.|+.+.+.+.++++++..
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~   29 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVL   29 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEE
Confidence            57999999999999999988888877654

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=89.03  E-value=0.17  Score=30.99  Aligned_cols=24  Identities=21%  Similarity=0.156  Sum_probs=21.4

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCC
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      +|.|.|++|.+|++++..+..++.
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l   25 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDI   25 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCC
Confidence            588999999999999999988753

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=88.88  E-value=0.31  Score=29.03  Aligned_cols=31  Identities=26%  Similarity=0.297  Sum_probs=25.2

Q ss_pred             ceEEEe-ccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          53 QTVFIT-GATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        53 ~~vlit-GatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.++|. .+.||+|..++..|.+.|.+|+.|.
T Consensus        40 ~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~   71 (156)
T d1djqa2          40 KRVVILNADTYFMAPSLAEKLATAGHEVTIVS   71 (156)
T ss_dssp             SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEE
T ss_pred             CceEEEecCCChHHHHHHHHHHHcCCeEEEEe
Confidence            344444 5779999999999999999998774

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=88.67  E-value=0.37  Score=28.08  Aligned_cols=31  Identities=13%  Similarity=0.320  Sum_probs=26.0

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .++++|. |.||+|..++..|.+.|.+|+.|.
T Consensus        30 ~k~vvVi-GgG~iG~E~A~~l~~~g~~Vtlie   60 (123)
T d1nhpa2          30 VNNVVVI-GSGYIGIEAAEAFAKAGKKVTVID   60 (123)
T ss_dssp             CCEEEEE-CCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEE-CChHHHHHHHHHhhccceEEEEEE
Confidence            4677766 579999999999999999998764

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=88.16  E-value=0.32  Score=29.84  Aligned_cols=30  Identities=23%  Similarity=0.249  Sum_probs=25.0

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++|+|.| .|..|-..+..|.++|++|..+
T Consensus         6 ~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vi   35 (268)
T d1c0pa1           6 QKRVVVLG-SGVIGLSSALILARKGYSVHIL   35 (268)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCcEEEEC-ccHHHHHHHHHHHHCCCCEEEE
Confidence            35677776 5999999999999999998754

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=87.79  E-value=0.32  Score=30.78  Aligned_cols=34  Identities=15%  Similarity=0.129  Sum_probs=30.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.+++++|.|.+..+|+-+...|.++|..|...|
T Consensus        35 l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h   68 (166)
T d1b0aa1          35 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTH   68 (166)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEEC
T ss_pred             cccceEEEEeccccccHHHHHHHHHhhccccccc
Confidence            4679999999999999999999999999987765

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.48  E-value=0.36  Score=28.45  Aligned_cols=27  Identities=26%  Similarity=0.342  Sum_probs=22.8

Q ss_pred             EEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          55 VFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        55 vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|.| +|+.|...+..|.++|++|..+
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vl   34 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHI   34 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEE
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEE
Confidence            55555 8999999999999999998754

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.10  E-value=0.41  Score=30.26  Aligned_cols=34  Identities=12%  Similarity=0.232  Sum_probs=31.0

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.++++.|.|.+..+|+-+...|.++|..|..+|
T Consensus        37 l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~   70 (170)
T d1a4ia1          37 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCH   70 (170)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEEC
T ss_pred             cccceEEEEecCCccchHHHHHHHhccCceEEEe
Confidence            4689999999999999999999999998888765

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=86.89  E-value=0.26  Score=29.60  Aligned_cols=23  Identities=22%  Similarity=0.274  Sum_probs=19.8

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcC
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCC   76 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g   76 (84)
                      ++|.|.|+ |.+|++++..+...+
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~   23 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQ   23 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCC
Confidence            46889996 999999999998875

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=86.87  E-value=0.33  Score=30.07  Aligned_cols=28  Identities=18%  Similarity=0.303  Sum_probs=21.7

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      |+|.|.| .||+|..++..+ +.|++|..+
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~   28 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIV   28 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEE
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEE
Confidence            4677885 899999988655 578988754

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=86.84  E-value=0.35  Score=32.34  Aligned_cols=30  Identities=23%  Similarity=0.462  Sum_probs=24.6

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .|+|+|.| +|+-|...+..|.++|++|..+
T Consensus         2 ~KKI~IIG-aG~sGL~aA~~L~k~G~~V~vi   31 (314)
T d2bi7a1           2 SKKILIVG-AGFSGAVIGRQLAEKGHQVHII   31 (314)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTTCEEEEE
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHhCCCCEEEE
Confidence            46677765 6999999999999999998654

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=86.78  E-value=0.29  Score=29.75  Aligned_cols=25  Identities=32%  Similarity=0.466  Sum_probs=21.5

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      +++|-|.|+ |++|++++..+..++.
T Consensus         6 ~~KI~IiGa-G~vG~~~a~~l~~~~l   30 (148)
T d1ldna1           6 GARVVVIGA-GFVGASYVFALMNQGI   30 (148)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTC
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhcCC
Confidence            467999996 9999999999998764

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=86.27  E-value=0.37  Score=28.77  Aligned_cols=36  Identities=17%  Similarity=0.299  Sum_probs=28.3

Q ss_pred             hhhccceEEEeccC---cchHHHHHHHHHHcC-CceEEEE
Q psy8179          48 EFYKDQTVFITGAT---GFLGSLLVEKLLRCC-PQMLSLR   83 (84)
Q Consensus        48 ~~~~~~~vlitGat---GfiG~~l~~~ll~~g-~~V~~I~   83 (84)
                      .+++.++|.|.|++   +..|..+++.|.+.+ ++|..|+
T Consensus         4 ~lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVn   43 (129)
T d2csua1           4 YFFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVN   43 (129)
T ss_dssp             TTTSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HhCCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEec
Confidence            35677899999998   899999999987755 4665553

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=85.74  E-value=0.51  Score=29.44  Aligned_cols=31  Identities=26%  Similarity=0.272  Sum_probs=25.4

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.++|+|.| +|..|-..+..|.++|++|..+
T Consensus        29 ~pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vl   59 (370)
T d2iida1          29 NPKHVVIVG-AGMAGLSAAYVLAGAGHQVTVL   59 (370)
T ss_dssp             SCCEEEEEC-CBHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEE
Confidence            346788876 5899999999999999998754

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=85.46  E-value=0.56  Score=28.36  Aligned_cols=33  Identities=12%  Similarity=0.217  Sum_probs=28.9

Q ss_pred             ccceEEEeccC---cchHHHHHHHHHHcCCceEEEE
Q psy8179          51 KDQTVFITGAT---GFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        51 ~~~~vlitGat---GfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +.++|.|.|++   +-.|..+++.|.+.||+|.-|+
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVn   53 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVN   53 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEEC
Confidence            56899999988   7899999999999999877664

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=85.39  E-value=0.44  Score=27.37  Aligned_cols=30  Identities=17%  Similarity=0.155  Sum_probs=21.6

Q ss_pred             ceEEEeccCcchHHHHHHHHHH---cCCceEEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLR---CCPQMLSLR   83 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~---~g~~V~~I~   83 (84)
                      ++++|.|| ||+|-.++..|.+   ++.+|+.|+
T Consensus        21 ~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~   53 (117)
T d1aoga2          21 RRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCY   53 (117)
T ss_dssp             SEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred             CeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEe
Confidence            57888887 9999998865554   445677654

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=85.28  E-value=0.41  Score=29.59  Aligned_cols=28  Identities=29%  Similarity=0.204  Sum_probs=24.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQML   80 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~   80 (84)
                      .+|+|+||+|-+|+..++.....|.++.
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~v   59 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRV   59 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEE
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcce
Confidence            6799999999999999998887877643

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=85.28  E-value=0.61  Score=27.26  Aligned_cols=31  Identities=19%  Similarity=0.415  Sum_probs=26.4

Q ss_pred             ceEEEeccC---cchHHHHHHHHHHcCCceEEEE
Q psy8179          53 QTVFITGAT---GFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        53 ~~vlitGat---GfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      |+|.|.|++   +-.|..+++.|++.||+|..|+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVn   35 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVN   35 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEc
Confidence            578899977   7889999999999999876654

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=85.24  E-value=0.57  Score=26.70  Aligned_cols=32  Identities=19%  Similarity=0.282  Sum_probs=26.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++++|+|.|+ |-+|..-++.|++.|.+|+.+
T Consensus        10 l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~   41 (113)
T d1pjqa1          10 LRDRDCLIVGG-GDVAERKARLLLEAGARLTVN   41 (113)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEE
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEE
Confidence            56789999975 569999999999999887654

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=85.08  E-value=0.35  Score=29.53  Aligned_cols=23  Identities=22%  Similarity=0.336  Sum_probs=19.9

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcC
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCC   76 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g   76 (84)
                      ++|.|.|+ |++|+.++..|+.++
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~   24 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQG   24 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHT
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcC
Confidence            56888995 999999999998876

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=85.02  E-value=0.71  Score=28.24  Aligned_cols=29  Identities=28%  Similarity=0.475  Sum_probs=25.4

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCce
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQM   79 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V   79 (84)
                      .++++++|.|+ |=+|..+++.|...|+.-
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~   50 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRA   50 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSE
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHhcCCcE
Confidence            46789999998 999999999999998753

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=84.80  E-value=0.44  Score=28.42  Aligned_cols=28  Identities=14%  Similarity=0.100  Sum_probs=23.3

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      |+|-|. |.|..|+.+++.|.++|++|..
T Consensus         1 MkIgiI-G~G~mG~~ia~~l~~~g~~v~~   28 (152)
T d1i36a2           1 LRVGFI-GFGEVAQTLASRLRSRGVEVVT   28 (152)
T ss_dssp             CEEEEE-SCSHHHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEE-cHHHHHHHHHHHHHHCCCeEEE
Confidence            356666 6799999999999999998754

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=84.45  E-value=0.74  Score=27.09  Aligned_cols=31  Identities=13%  Similarity=0.334  Sum_probs=26.1

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .+++.|. |+||+|-.++..|.+.|.+|+.|.
T Consensus        35 ~k~v~VI-GgG~iG~E~A~~l~~~g~~Vtvie   65 (133)
T d1q1ra2          35 DNRLVVI-GGGYIGLEVAATAIKANMHVTLLD   65 (133)
T ss_dssp             TCEEEEE-CCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred             CCEEEEE-CCchHHHHHHHHHHhhCcceeeee
Confidence            4677777 569999999999999999988763

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=84.33  E-value=0.64  Score=29.76  Aligned_cols=30  Identities=33%  Similarity=0.387  Sum_probs=24.6

Q ss_pred             hhhccceEEEeccCcchHHHHHHHHHHcCCc
Q psy8179          48 EFYKDQTVFITGATGFLGSLLVEKLLRCCPQ   78 (84)
Q Consensus        48 ~~~~~~~vlitGatGfiG~~l~~~ll~~g~~   78 (84)
                      +..+..+|+|.|+.| +|++++..|...|..
T Consensus        26 ~kL~~~~VliiG~Gg-lGs~va~~La~~Gvg   55 (247)
T d1jw9b_          26 EALKDSRVLIVGLGG-LGCAASQYLASAGVG   55 (247)
T ss_dssp             HHHHHCEEEEECCSH-HHHHHHHHHHHHTCS
T ss_pred             HHHhCCCEEEECCCH-HHHHHHHHHHHcCCC
Confidence            346678999999555 899999999999854

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=83.21  E-value=0.46  Score=28.75  Aligned_cols=23  Identities=26%  Similarity=0.141  Sum_probs=19.7

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcC
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCC   76 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g   76 (84)
                      |+|.|.|+ |.+|++++..+..++
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~   23 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNL   23 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcC
Confidence            46888896 999999999888875

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=82.95  E-value=0.78  Score=27.69  Aligned_cols=30  Identities=20%  Similarity=0.169  Sum_probs=24.8

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +|+|+|.| +|.-|-..+..|.+.|++|..+
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~G~~V~vl   30 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIHGLNVTVF   30 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTSCEEEEE
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCCEEEE
Confidence            36787775 6899999999999999988754

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.66  E-value=0.83  Score=28.75  Aligned_cols=35  Identities=11%  Similarity=0.124  Sum_probs=30.6

Q ss_pred             hhccceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          49 FYKDQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        49 ~~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ...++.++|.|.+..+|+-+...|.++|..|...+
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~   60 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVD   60 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEEC
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEec
Confidence            46789999999999999999999999988776543

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=82.60  E-value=1.1  Score=27.31  Aligned_cols=25  Identities=16%  Similarity=0.149  Sum_probs=20.6

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      .++|.|.|+ |.+|+.+...+...+.
T Consensus         7 ~~KI~IIGa-G~VG~~lA~~l~~~~~   31 (154)
T d1pzga1           7 RKKVAMIGS-GMIGGTMGYLCALREL   31 (154)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCC
Confidence            467889997 9999999988877764

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=82.40  E-value=0.83  Score=28.28  Aligned_cols=29  Identities=10%  Similarity=0.037  Sum_probs=24.2

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      ++|+|.| .|..|...+..|.++|++|..+
T Consensus         5 ~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~   33 (265)
T d2voua1           5 DRIAVVG-GSISGLTAALMLRDAGVDVDVY   33 (265)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CcEEEEC-cCHHHHHHHHHHHHCCCCEEEE
Confidence            5677776 5999999999999999988754

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=81.91  E-value=0.92  Score=29.01  Aligned_cols=31  Identities=26%  Similarity=0.365  Sum_probs=26.7

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      +++++|.|-| .|-+|+++++.|.+.|.+|..
T Consensus        25 L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv   55 (201)
T d1c1da1          25 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLV   55 (201)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEE
Confidence            5678898876 888999999999999988753

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.84  E-value=0.89  Score=32.18  Aligned_cols=31  Identities=29%  Similarity=0.375  Sum_probs=25.8

Q ss_pred             hhhhhccceEEEeccCcchHHHHHHHHHHcCC
Q psy8179          46 IQEFYKDQTVFITGATGFLGSLLVEKLLRCCP   77 (84)
Q Consensus        46 ~~~~~~~~~vlitGatGfiG~~l~~~ll~~g~   77 (84)
                      ....++..+|+|.|+.| +|+.+++.|...|.
T Consensus        31 ~~~~l~~~kVlvvG~Gg-lG~ei~k~L~~~Gv   61 (426)
T d1yovb1          31 LQFLLDTCKVLVIGAGG-LGCELLKNLALSGF   61 (426)
T ss_dssp             HHHHHHHCCEEEECSST-THHHHHHHHHTTTC
T ss_pred             HHHHHhcCeEEEECCCH-HHHHHHHHHHHcCC
Confidence            34446678899999977 89999999999886

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=81.83  E-value=0.88  Score=26.90  Aligned_cols=28  Identities=11%  Similarity=0.141  Sum_probs=24.2

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .++|+|. |=+|..+++.|.+.|++|..|
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vI   32 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVI   32 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEE
Confidence            4788887 788999999999999998776

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.48  E-value=1  Score=27.11  Aligned_cols=31  Identities=19%  Similarity=0.117  Sum_probs=24.7

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|.|+ |-+|...++.+...|.+|..+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~   57 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVI   57 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhcccccccc
Confidence            3578999886 889999888887888877543

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=81.48  E-value=1.4  Score=25.50  Aligned_cols=31  Identities=13%  Similarity=0.189  Sum_probs=25.5

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .++++|. |.||+|-.++..|.+.|.+|..|.
T Consensus        30 ~~~vvII-GgG~iG~E~A~~l~~~g~~Vtli~   60 (121)
T d1d7ya2          30 QSRLLIV-GGGVIGLELAATARTAGVHVSLVE   60 (121)
T ss_dssp             TCEEEEE-CCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCeEEEE-CcchhHHHHHHHhhcccceEEEEe
Confidence            4666665 569999999999999999988764

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=81.28  E-value=0.7  Score=26.65  Aligned_cols=30  Identities=20%  Similarity=0.233  Sum_probs=25.4

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ++++|.| .||||-.++..|.+.|.+|+.+.
T Consensus        23 ~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~   52 (119)
T d3lada2          23 GKLGVIG-AGVIGLELGSVWARLGAEVTVLE   52 (119)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CeEEEEC-CChHHHHHHHHHHHcCCceEEEE
Confidence            5666665 69999999999999999998774

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=81.20  E-value=1  Score=25.56  Aligned_cols=30  Identities=17%  Similarity=0.339  Sum_probs=25.5

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ++++|.| .||+|-.++..|.+.|.+|+.|+
T Consensus        23 ~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve   52 (117)
T d1ebda2          23 KSLVVIG-GGYIGIELGTAYANFGTKVTILE   52 (117)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CeEEEEC-CCccceeeeeeecccccEEEEEE
Confidence            5666665 69999999999999999998875

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=81.05  E-value=0.99  Score=27.38  Aligned_cols=30  Identities=30%  Similarity=0.288  Sum_probs=23.8

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCC-ceEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCP-QMLS   81 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~-~V~~   81 (84)
                      .+.+|+|.|+ |-+|...++.+...|+ +|..
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~   58 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIV   58 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEE
T ss_pred             CCCEEEEECC-Cccchhheecccccccccccc
Confidence            3578999986 8899999998888887 4443

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.89  E-value=1.2  Score=27.09  Aligned_cols=29  Identities=24%  Similarity=0.275  Sum_probs=23.7

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+|+|.| +|+-|-..+..|.+.|++|..+
T Consensus         6 ~kViVIG-aG~aGL~aA~~L~~~G~~V~Vl   34 (449)
T d2dw4a2           6 GKVIIIG-SGVSGLAAARQLQSFGMDVTLL   34 (449)
T ss_dssp             CEEEEEC-CBHHHHHHHHHHHHTTCEEEEE
T ss_pred             CcEEEEC-CCHHHHHHHHHHHhCCCCEEEE
Confidence            4577775 6999999999999999998653

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=80.84  E-value=1  Score=26.96  Aligned_cols=27  Identities=19%  Similarity=0.327  Sum_probs=22.2

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      +|-+. |.|..|+.+++.|+++||+|..
T Consensus         2 kIgiI-GlG~MG~~~A~~L~~~G~~V~~   28 (161)
T d1vpda2           2 KVGFI-GLGIMGKPMSKNLLKAGYSLVV   28 (161)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEE
T ss_pred             EEEEE-ehhHHHHHHHHHHHHCCCeEEE
Confidence            45555 5699999999999999999753

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=80.76  E-value=0.76  Score=26.49  Aligned_cols=31  Identities=19%  Similarity=0.282  Sum_probs=25.5

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      .++++|. |.||+|-.++..|.+.|.+|+.|+
T Consensus        32 ~~~vvIi-GgG~iG~E~A~~l~~~g~~Vtlv~   62 (122)
T d1xhca2          32 SGEAIII-GGGFIGLELAGNLAEAGYHVKLIH   62 (122)
T ss_dssp             HSEEEEE-ECSHHHHHHHHHHHHTTCEEEEEC
T ss_pred             CCcEEEE-CCcHHHHHHHHHhhcccceEEEEe
Confidence            3566665 569999999999999999998764

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=80.63  E-value=0.57  Score=28.13  Aligned_cols=29  Identities=24%  Similarity=0.240  Sum_probs=23.8

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      +|+|.| .|++|-.++..|.+.|+++..+.
T Consensus         5 ~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~   33 (183)
T d1d7ya1           5 PVVVLG-AGLASVSFVAELRQAGYQGLITV   33 (183)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHHTCCSCEEE
T ss_pred             CEEEEC-ccHHHHHHHHHHHhcCCceEEEE
Confidence            467776 89999999999999998876553

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=80.55  E-value=1  Score=27.58  Aligned_cols=28  Identities=32%  Similarity=0.418  Sum_probs=19.7

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCceE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQML   80 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~V~   80 (84)
                      ..++-|.| +|.+|+.+...+++..+.+.
T Consensus         4 kirvaIIG-aG~ig~~~~~~~l~~~~~~e   31 (157)
T d1nvmb1           4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLE   31 (157)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHCSSEE
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHhhCCcce
Confidence            35789999 99999876655666545543

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.40  E-value=1.2  Score=26.41  Aligned_cols=31  Identities=26%  Similarity=0.247  Sum_probs=24.3

Q ss_pred             ccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          51 KDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        51 ~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      .+.+|+|.|+ |-+|...++.+...|.+|..+
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~   57 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAI   57 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCcccee
Confidence            3567999876 889999888888888776554

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=80.36  E-value=0.46  Score=29.04  Aligned_cols=26  Identities=15%  Similarity=0.212  Sum_probs=21.8

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCce
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQM   79 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V   79 (84)
                      |+|+|.| +|.+|...+.+|.++|++|
T Consensus         1 mkV~VIG-aGi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIG-AGVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCCCCc
Confidence            4577775 5999999999999999876

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=80.29  E-value=1.2  Score=26.51  Aligned_cols=30  Identities=13%  Similarity=0.069  Sum_probs=24.6

Q ss_pred             cceEEEeccCcchHHHHHHHHHHcCCc-eEEE
Q psy8179          52 DQTVFITGATGFLGSLLVEKLLRCCPQ-MLSL   82 (84)
Q Consensus        52 ~~~vlitGatGfiG~~l~~~ll~~g~~-V~~I   82 (84)
                      +++|+|.| .|..|-..+..|.+.|++ |..+
T Consensus         4 ~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~   34 (196)
T d1gtea4           4 SAKIALLG-AGPASISCASFLARLGYSDITIF   34 (196)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEE
T ss_pred             CCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEE
Confidence            46788886 599999999999999984 7554

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=80.19  E-value=0.92  Score=30.16  Aligned_cols=32  Identities=22%  Similarity=0.218  Sum_probs=27.9

Q ss_pred             hccceEEEeccCcchHHHHHHHHHHcCCceEEE
Q psy8179          50 YKDQTVFITGATGFLGSLLVEKLLRCCPQMLSL   82 (84)
Q Consensus        50 ~~~~~vlitGatGfiG~~l~~~ll~~g~~V~~I   82 (84)
                      +.+++|.|.| .|-+|+++++.|.+.|.+|..|
T Consensus        34 l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvav   65 (255)
T d1bgva1          34 LVGKTVALAG-FGNVAWGAAKKLAELGAKAVTL   65 (255)
T ss_dssp             STTCEEEECC-SSHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEE
Confidence            4678888887 7999999999999999988765

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.12  E-value=0.65  Score=28.01  Aligned_cols=27  Identities=15%  Similarity=0.273  Sum_probs=22.5

Q ss_pred             eEEEeccCcchHHHHHHHHHHcCCceEE
Q psy8179          54 TVFITGATGFLGSLLVEKLLRCCPQMLS   81 (84)
Q Consensus        54 ~vlitGatGfiG~~l~~~ll~~g~~V~~   81 (84)
                      +|-+. |.|..|+.+++.|.++||+|..
T Consensus         3 kIg~I-GlG~MG~~iA~~L~~~g~~v~~   29 (162)
T d3cuma2           3 QIAFI-GLGHMGAPMATNLLKAGYLLNV   29 (162)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEE
T ss_pred             EEEEE-EEHHHHHHHHHHHHHCCCeEEE
Confidence            45555 6799999999999999998854

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=80.07  E-value=0.89  Score=25.84  Aligned_cols=30  Identities=17%  Similarity=0.238  Sum_probs=24.8

Q ss_pred             ceEEEeccCcchHHHHHHHHHHcCCceEEEE
Q psy8179          53 QTVFITGATGFLGSLLVEKLLRCCPQMLSLR   83 (84)
Q Consensus        53 ~~vlitGatGfiG~~l~~~ll~~g~~V~~I~   83 (84)
                      ++++|. |.||+|-.++..|.+.|.+|+.|+
T Consensus        22 ~~vvIi-GgG~~G~E~A~~l~~~g~~Vtlve   51 (115)
T d1lvla2          22 QHLVVV-GGGYIGLELGIAYRKLGAQVSVVE   51 (115)
T ss_dssp             SEEEEE-CCSHHHHHHHHHHHHHTCEEEEEC
T ss_pred             CeEEEE-CCCHHHHHHHHHHhhcccceEEEe
Confidence            455555 679999999999999999998764