Psyllid ID: psy817

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850----
Protein Sequence
MELDVKKNTLDRSRSFNNDTRFPLALMRSKTSKSYSTKKAMFNQLNDEKPTMVDNMRTDSLEETISDELSYKVCKESIRASLLEAMKMSSGDVNVLYAIENSLYEPDEMATLFSKASQAEKTTALLWCVFVKREDLLDALHQLGADLSNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQDPEASTKDIELKLNFKYILQNGPDGEIGMLKIFQNDGQKEILEHPLCEAFLYVKWEKMKKFYLFRLVLSSIFVLVLSVYVLTTLAQDCYNASKNITLFTPTFCTKNSEIGHFLLRNPDFMETVWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKTAGLDKLVRQTELIHSLELALFQGYLPNRIVSMLKSQALLTPSSYTVALNVKPLNPRETRLPKEVMLNALDIARQRRIDPHFIWASEEIFDLE
Secondary Structure (PSIPRED)
ccHHHHHHHHHccccccccccccHHHHHHHHHcccHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccccHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHcccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHcccHHHHHHHHHccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHcccccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccccHHHHHHHccccccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHccHHHHccccHHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHccccccccccccccccHHHHHcccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHEEcccccccccccHHHHHHHHHHHHHHHHHHHHcccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccccccEEEEEEEcccccccccHHHHHHHHHHHHHHHcccccccccHHHHHccc
Secondary Structure Prediction (SSPRO)
cccEEEEEcccccccccccccccHHHHHHHHHHHHHHccccccccccccHHHHHHcccHHHHHHHHHcccHHHccccccccHHHHHHHHcccHHHHHHHHHccccccccccHHEcccccccccHHHHHHHcccHHHHHHHHHcccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHcccHHHHHHHHHccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHEEEEEHEEEEcHccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHccHHHEEEcccEEEEcccccEEEEEEcccccHHccccHHHHHHHHHHHHHHHcccccEEEcEEEEccc
Coil and Loop (DISEMBL)
meldvkkntldrsrsfnndtrfpLALMrsktsksySTKKAMFnqlndekptmvdnmrtdsleetisdelSYKVCKESIRASLLEAMKMSSGDVNVLYAIEnslyepdemATLFSKASQAEKTTALLWCVFVKREDLLDALHQLGAdlsndkygALHLAAFNGSIKGCSWLMlhghdinftkdsytplhfAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLqinpnvlnnkgvsplhiaADRGLISCLKAILdsgmadvdiktKERRVTALHLAAENGYVECLRILLENHancnernhkeqiplhlAAKCQSVECMEMLLRkgsqvnasdcdnrtplhaslsknilsvhPLEILLKWGanvnardifgyspIHIAALSELSQCVDCLimhgadissktpsgssaLSIIMRNTPSSISSVRKKLdssislqdpeastkdIELKLNFKYIlqngpdgeigMLKIFQNDGQKEILEHPLCEAFLYVKWEKMKKFYLFRLVLSSIFVLVLSVYVLTTLAQDCynasknitlftptfctknseighfllrnpdfMETVWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSnlmgmigqlpsvGTYVAMFSRVQLEFLKLFQAYICLLVGFTLtfcivfpsedrfqnpiiGFINILVMMTGELNVNEVllgteakppvllkgtAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKTAGLDKLVRQTELIHSLELALFQGYLPNRIVSMLKsqalltpssytvalnvkplnpretrlpkeVMLNALDIArqrridphfiwaseeifdle
Flexible Loop (DISEMBL)
meldvkkntldrsrsfnndtrfplalmrsktsksystkkamfnqlndekptmvdNMRTDSLEetisdelsykVCKESIRASLLEAMKMSSGDVNVLYAIENSLYEPDEMATLFSKASQAEKTTALLWCVFVKREDLLDALHQLGADLSNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLdssislqdpeastkdiELKLNFKYILQNGPDGEIGMLKIFQNDGQKEILEHPLCEAFLYVKWEKMKKFYLFRLVLSSIFVLVLSVYVLTTLAQDCYNASKNITLFTPTFCTKNSEIGHFLLRNPDFMETVWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKTAGLDKLVRQTELIHSLELALFQGYLPNRIVSMLKSQALLTPSSYtvalnvkplnpretrlpkEVMLNALDIARQRRIDPHFIWASEEIFDLE
Low Complexity Region (SEG)
MELDVKKNTLDRSRSFNNDTRFPLALMRsktsksystkkAMFNQLNDEKPTMVDNMRTDSLEETISDELSYKVCKESIRASLLEAMKMSSGDVNVLYAIENSLYEPDEMATLFSKASQAEKTTALLWCVFVKREDLLDALHQLGADLSNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQDPEASTKDIELKLNFKYILQNGPDGEIGMLKIFQNDGQKEILEHPLCEAFLYVKWEKMKKFYLFRlvlssifvlvlsvyvlttlAQDCYNASKNITLFTPTFCTKNSEIGHFLLRNPDFMETVWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKTAGLDKLVRQTELIHSLELALFQGYLPNRIVSMLKSQALLTPSSYTVALNVKPLNPRETRLPKEVMLNALDIARQRRIDPHFIWASEEIFDLE
Disordered region (IsUnstruct)
********************************************************************LSYKVCKESIRASLLEAMKMSSGDVNVLYAIENSLYEPDEMATLFSKASQAEKTTALLWCVFVKREDLLDALHQLGADLSNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVN**DCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD*********************************************IELKLNFKYILQNGPDGEIGMLKIFQNDGQKEILEHPLCEAFLYVKWEKMKKFYLFRLVLSSIFVLVLSVYVLTTLAQDCYNASKNITLFTPTFCTKNSEIGHFLLRNPDFMETVWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKTAGLDKLVRQTELIHSLELALFQGYLPNRIVSMLKSQALLTPSSYTVALNVKPLNPRETRLPKEVMLNALDIARQRRIDPHFIWASEEIF***
Disordered Region (DISOPRED)
MELDVKKNTLDRSRSFNNDTRFPLALMRSKTSKSYSTKKAMFNQLNDEKPTMVDNMRTDSLEETISDELSYKVCKESIRASLLEAMKMSSGDVNVLYAIENSLYEPDEMATLFSKASQAEKTTALLWCVFVKREDLLDALHQLGADLSNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQDPEASTKDIELKLNFKYILQNGPDGEIGMLKIFQNDGQKEILEHPLCEAFLYVKWEKMKKFYLFRLVLSSIFVLVLSVYVLTTLAQDCYNASKNITLFTPTFCTKNSEIGHFLLRNPDFMETVWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKTAGLDKLVRQTELIHSLELALFQGYLPNRIVSMLKSQALLTPSSYTVALNVKPLNPRETRLPKEVMLNALDIA********************
Disordered Region (DISEMBL)
********TLDRSRSFNNDTRFPLALMRSKTSKSYSTKKAMFNQLNDEKPTMVDNMRTDSLEETISDELSYKVCKESIRASLLEAMKMSSGDVNVLYAIENSLYEPDEMATLFSKASQAEKTTALLWCVFVKREDLLDALHQLGADLSNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPS******************EASTKDIELKLNFKYILQNGPDGEIGMLKIFQNDGQKEILEHPLCEAFLYVKWEKMKKFYLFRLVLSSIFVLVLSVYVLTTLAQDCYNASKNITLFTPTFCTKNSEIGHFLLRNPDFMETVWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKTAGLDKLVRQTELIHSLELALFQGYLPNRIVSMLKSQALLTPSSYTVALNVKPLNPRETRLPKEVMLNALDIARQRRIDPHFIWASEEIFDLE
Disordered Region (DISPRO)
*ELDVKKNTLDRSRSFNNDTRFPLALMRSKTSKSYSTKKAMFNQLNDEKPTMVDNMRTDSLEETISDELSYKVCKESIRASLLEAMKMSSGDVNVLYAIENSLYEPDEMATLFSKASQAEKTTALLWCVFVKREDLLDALHQLGADLSNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQDPEASTKDIELKLNFKYILQNGPDGEIGMLKIFQNDGQKEILEHPLCEAFLYVKWEKMKKFYLFRLVLSSIFVLVLSVYVLTTLAQDCYNASKNITLFTPTFCTKNSEIGHFLLRNPDFMETVWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKTAGLDKLVRQTELIHSLELALFQGYLPNRIVSMLKSQALLTPSSYTVALNVKPLNPRETRLPKEVMLNALDIARQRRIDPHFIWASEEIFDLE
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MELDVKKNTLDRSRSFNNDTRFPLALMRSKTSKSYSTKKAMFNQLNDEKPTMVDNMRTDSLEETISDELSYKVCKESIRASLLEAMKMSSGDVNVLYAIENSLYEPDEMATLFSKASQAEKTTALLWCVFVKREDLLDALHQLGADLSNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQDPEASTKDIELKLNFKYILQNGPDGEIGMLKIFQNDGQKEILEHPLCEAFLYVKWEKMKKFYLFRLVLSSIFVLVLSVYVLTTLAQDCYNASKNITLFTPTFCTKNSEIGHFLLRNPDFMETVWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKTAGLDKLVRQTELIHSLELALFQGYLPNRIVSMLKSQALLTPSSYTVALNVKPLNPRETRLPKEVMLNALDIARQRRIDPHFIWASEEIFDLE
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	854	2.2.26 [Sep-21-2011]
Q9W0T5	956	Transient receptor potent	no	N/A	0.811	0.724	0.380	1e-127
Q18297	1211	Transient receptor potent	yes	N/A	0.641	0.452	0.244	1e-38
Q7Z020	1296	Transient receptor potent	no	N/A	0.770	0.507	0.238	2e-35
O75762	1119	Transient receptor potent	yes	N/A	0.611	0.466	0.250	4e-34
Q8BLA8	1125	Transient receptor potent	yes	N/A	0.752	0.571	0.234	6e-32
Q6RI86	1125	Transient receptor potent	yes	N/A	0.607	0.461	0.244	2e-31
Q4UMH6	1179	Putative ankyrin repeat p	yes	N/A	0.385	0.279	0.289	2e-29
Q12955	4377	Ankyrin-3 OS=Homo sapiens	no	N/A	0.354	0.069	0.296	1e-27
G5E8K5	1961	Ankyrin-3 OS=Mus musculus	no	N/A	0.354	0.154	0.296	3e-27
Q8NFD2	765	Ankyrin repeat and protei	no	N/A	0.370	0.413	0.290	4e-27

>sp|Q9W0T5|PYX_DROME Transient receptor potential channel pyrexia OS=Drosophila melanogaster GN=pyx PE=2 SV=2

 Score =  454 bits (1169), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 283/743 (38%), Positives = 405/743 (54%), Gaps = 50/743 (6%)

Query: 119 AEKTTALLWC-VFVKREDLLDALHQLGADLS-NDKYG--ALHLAAFNGSIKGCSWLMLHG 174
           A+   AL+ C VF   E+ L  L    AD +  D  G   LH A    +      L+  G
Sbjct: 97  ADCNLALICCSVFGSVENTLFLLKHYNADPNVADSRGRTPLHFACCRANAPIAKVLLDFG 156

Query: 175 HDINF--TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIH-----ETIVHSAVSTNAVDCVQ 227
            D N    +   T LH A     V+C   L++ KA I+      + +H A+  NAVDCV+
Sbjct: 157 ADPNRWDARKEVTSLHCAASSKSVECILLLLRRKASINIGIEKRSALHYAIDVNAVDCVE 216

Query: 228 LLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAE 287
           +LL    +PN       +PLH A+  G   C++ +L S  ADV  +  E +VTALHLAAE
Sbjct: 217 ILLKYGADPNTPQVYTETPLHTASAAGFAKCVQLLL-SHNADVRSQFGEGKVTALHLAAE 275

Query: 288 NGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTP 347
           N YVEC R+LLE+ A  + RN   Q PLHLA   QS+  +++L+  G+ VNA   D RT 
Sbjct: 276 NDYVECARLLLEHRAEVDCRNASHQTPLHLACLSQSIGTVDLLISYGANVNAVYRDGRTA 335

Query: 348 LHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISS 407
           LHA++ K   S+     LLK GA+VN  D +GY+P+HIAAL+E S CV   I HGADI++
Sbjct: 336 LHAAIVKQSRSLDCCNALLKAGADVNKADNYGYTPLHIAALNEFSSCVYTFIEHGADITA 395

Query: 408 KTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQDPEASTKDIELKLNFKYILQNGP--D 465
           +T    SALS I+R TP  I  + +KLDSSI   D E    D ++KL+F+ ++ +     
Sbjct: 396 RTDGRVSALSFIVRRTPEIIPKLMQKLDSSIKANDQEIGDVDCQIKLDFRLLVPSSSMDR 455

Query: 466 GEIGMLKIFQNDGQKEILEHPLCEAFLYVKWEKMKKFYLFRLVLSSIFVLVLSVYVLTTL 525
           GE  +L      GQK IL HPLCE FL++KW +++KF+L  L   ++FV++ + YV+   
Sbjct: 456 GETELLLSLIEVGQKRILMHPLCETFLFLKWRRIRKFFLMSLAYHTLFVILFTFYVIWVY 515

Query: 526 AQDCYNASKNITLFTPTFCTKNSEIGHFLLRNPDFMETVWYVLALLATIELIRKIFGLVE 585
            +                C K  E    L   P ++ T+ Y++ +L  I L +++F +  
Sbjct: 516 VR----------------CCKKEE----LCVAPGYVSTIGYLVIILNLILLGKEVFQMAH 555

Query: 586 YASFREYCSHVTNLFEWYMIISVFLISCVYTKRT------YIWQNHVGAVAVLLGWSNLM 639
               R Y  +  N  +W +   V L     T RT       +WQ+HV A+ +LL W  LM
Sbjct: 556 --GLRGYAKYWENWLQWTIGTGVLLCVTPETVRTDDLTAVPVWQHHVAAIVILLVWLELM 613

Query: 640 GMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFIN 699
            ++G+ P  G YV MF++V + F K   AYICLLV F L+F ++F     F+N    F+ 
Sbjct: 614 MLVGRFPIFGVYVQMFTKVAVNFAKFLLAYICLLVAFGLSFAVLFNDYPAFENITWSFLK 673

Query: 700 ILVMMTGELNVNEVLLGTEA-KPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQG 758
            + MM+GEL   ++  G  A K PV    TAHI+F  F+L VTV+L NL+VG+AV DIQG
Sbjct: 674 SITMMSGELEFEDIFYGDYAVKFPV----TAHIIFLSFVLLVTVILTNLMVGLAVSDIQG 729

Query: 759 LHKTAGLDKLVRQTELIHSLELALFQGYL---PNRIVSMLKSQALLTPSSYTVALNVKPL 815
           L  +A LD+LVRQ EL+  LE   F   L   P  ++ + K  ALL  S   +   ++P 
Sbjct: 730 LQVSATLDRLVRQAELVSRLESLFFSRLLRSAPTNLIQLCKRSALLRTSRDKLQFTIRPN 789

Query: 816 NPRETRLPKEVMLNALDIARQRR 838
           +PR+ +LP+++ LN   +  +RR
Sbjct: 790 DPRDNQLPEDIKLNVYKLVAERR 812

Receptor-activated non-selective cation channel involved in protection or tolerance from high temperature stress. Activated by temperatures above 40 degrees Celsius. More permeable to K(+) than to Na(+). May act in stress protection allow flies to survive in natural environments.
Drosophila melanogaster (taxid: 7227)

>sp|Q18297|TRPA1_CAEEL Transient receptor potential cation channel subfamily A member 1 homolog OS=Caenorhabditis elegans GN=trpa-1 PE=2 SV=5

 Score =  162 bits (410), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 158/646 (24%), Positives = 277/646 (42%), Gaps = 98/646 (15%)

Query: 212  TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVD 271
            T +H   S   ++ +QLL     +   +N    + LH AA  G    ++ +L+  +  + 
Sbjct: 476  TPMHIVASNGYLEMMQLLQKHGASITQVNEDEETALHRAAIGGQTGAVRQLLEWDIRLLL 535

Query: 272  IKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLL 331
            +K  E   +ALHLAA +G+    ++LL+N A+   +N  ++ PL +A     +E  + L+
Sbjct: 536  MK-DEMGNSALHLAARSGHDATTKVLLDNGADKEAKNSYQKTPLQVAVDSGKLETCQRLV 594

Query: 332  RKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIA----- 386
             KG+Q+ +S  D +T LH +      S+  +   +  G  ++ RD  G +   IA     
Sbjct: 595  AKGAQIESS-SDTKTVLHTAAFYGNESI--VRYFIAEGVTIDRRDEEGKTAFDIACENDH 651

Query: 387  -----ALSELSQCVDCLI----------MHGADISSKTPSGS------SALSIIMRNTPS 425
                 A  E  Q  + +I           +  ++  +TP  +         S +M N   
Sbjct: 652  KDVARAFLETDQWKNLMIPCDVIPLDKHRNPVNMKRRTPFRTLLTKFPELASFVMDN--- 708

Query: 426  SISSVRKKLDSSIS-------LQDPE-----------------ASTKDIELKL------- 454
             I   +++ DS+ S       L D                    S  D + KL       
Sbjct: 709  CIEKSKEETDSTQSVAYNFEFLDDTYMMRCVSDDGTGEQLIGCKSAYDEDFKLEKDAQSY 768

Query: 455  --NFKYILQNGPDGEIGMLKIFQNDGQKEILEHPLCEAFLYVKWEKM-KKFYLFRLVLSS 511
              N+  + +  P      LK+  +  +  +L HPL +A L  KW ++ +  Y F L +  
Sbjct: 769  ASNYDRVYKYHP------LKLMADAEKLHLLNHPLSKALLKYKWNRLGRPMYYFALFMYL 822

Query: 512  IFVLVLSVYVLTTLAQDCYNASKNITLFTPTFCTKNSEIGHFLLRNPDFMETVW-YVLAL 570
            +F++ L+ YV  T A   YN     + +   +  +N          PD    VW  ++  
Sbjct: 823  VFIVSLTQYVRHTKAP--YNVWNEESYYDSEYFDENETCPQINTTKPD---VVWKIIIQT 877

Query: 571  LATIELIRKIFGLVEYASFREYCSHVTNLFEWY--MIISVFLIS------CVYTKRTYI- 621
            LA  +++ + F L     F+   +++ N   W    I S  LI+      C  T      
Sbjct: 878  LAVCQILVECFQL-----FQRKFAYLVNWENWIDCFIYSTALITVYDFSECSATSGVRQN 932

Query: 622  WQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFC 681
            WQ  + A+ +  GW NL+ MI ++P  G +V MF  +   F + F  ++  ++ F+ +F 
Sbjct: 933  WQWILAALCIFFGWINLLFMIRKMPRFGIFVVMFVDIVKTFFRFFPVFVLFIIAFSSSFY 992

Query: 682  IVFPSEDRFQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGTAHI-----VFTIF 736
            ++  +   F    +  +   VMM GE     +  G E      + G AH      +F  F
Sbjct: 993  VILQNRPEFSTIFMSPLKTTVMMIGEFEFTGIFHGDETTHAEKMFGPAHTAVACALFFFF 1052

Query: 737  MLFVTVVLMNLLVGIAVQDIQGLHKTAGLDKLVRQTELIHSLELAL 782
             + +T++LMNLLVG+AV DI+G+ + A L +L  Q +L+  +E +L
Sbjct: 1053 CIIMTILLMNLLVGLAVDDIKGVQEKAELKRLAMQVDLVLQIEASL 1098

Receptor-activated non-selective cation channel involved in the nose-touch response and foraging behavior. Contributes to the neural responses of sensory neurons to touch, particularly after repeated mechanical stimulation. Has no apparent role in thermosensory or chemosensory behaviors.

Caenorhabditis elegans (taxid: 6239)

>sp|Q7Z020|TRPA1_DROME Transient receptor potential cation channel subfamily A member 1 OS=Drosophila melanogaster GN=TrpA1 PE=2 SV=3

 Score =  151 bits (381), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 177/743 (23%), Positives = 307/743 (41%), Gaps = 85/743 (11%)

Query: 117  SQAEKTTALLWCVFVKREDLLDALHQLGAD---LSNDKYGALHLAAFNGSIKGCSWLMLH 173
            +  +K T L         D++  L   GAD   L  +    L LAA     K    L+  
Sbjct: 432  TDVQKMTPLHCASMFDHPDIVSYLVAEGADINALDKEHRSPLLLAASRSGWKTVHLLIRL 491

Query: 174  GHDINFTKDSYTP--LHFAVL--GNYVDCA------------KFLIKNKAHIHETIVHSA 217
            G  I+  KD+     LHF ++  G   D A            K L+  K  +  + +H A
Sbjct: 492  GACIS-VKDAAARNVLHFVIMNGGRLTDFAEQVANCQTQAQLKLLLNEKDSMGCSPLHYA 550

Query: 218  VSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKER 277
                 +  ++ L+ L    N+ NN   SPLH AA  G  + ++ +LDS      I   + 
Sbjct: 551  SRDGHIRSLENLIRLGACINLKNNNNESPLHFAARYGRYNTVRQLLDSEKGSFIINESDG 610

Query: 278  R-VTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQ 336
              +T LH++++ G+   +++LL N      R+H  + PL LAA     E +E+L    S 
Sbjct: 611  AGMTPLHISSQQGHTRVVQLLL-NRGALLHRDHTGRNPLQLAAMSGYTETIELLHSVHSH 669

Query: 337  V-NASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCV 395
            + +  D D  T LH +  +N    H + +L+  G  +   ++   S I  A   +  +  
Sbjct: 670  LLDQVDKDGNTALHLATMEN--KPHAISVLMSMGCKL-VYNVLDMSAIDYAIYYKYPEAA 726

Query: 396  DCLIMHG-------ADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQDPEASTK 448
              ++ H        A  S K P  + AL   M   P    +V+   D  I+  + +  +K
Sbjct: 727  LAMVTHEERANEVMALRSDKHPCVTLALIASM---PKVFEAVQ---DKCITKANCKKDSK 780

Query: 449  DIELKLNFKYI----------------LQNGPDGEIGMLKIFQNDGQKEILEHPLCEAFL 492
               +K +F ++                +       +  L      G+ E+L HPL + +L
Sbjct: 781  SFYIKYSFAFLQCPFMFAKIDEKTGESITTASPIPLPALNTMVTHGRVELLAHPLSQKYL 840

Query: 493  YVKWEKMKK-FYLFRLVLSSIFVLVLSVYVLTTLAQDCYNASKNITLFTPTFCTKNSE-I 550
             +KW    K F+L  L++ SIF++ +++Y    +      A  N T+    +C    E +
Sbjct: 841  QMKWNSYGKYFHLANLLIYSIFLVFVTIYSSLMMNNIELKAGDNKTM--SQYCNMGWEQL 898

Query: 551  GHFLLRNPDFME---------------TVWYVLALLATIELIRKIFGLVE-YASFREYCS 594
               L +NP                    + +   ++    L+  +  L++ Y     Y  
Sbjct: 899  TMNLSQNPSVASQIRLDSCEERINRTTAILFCAVVIVVYILLNSMRELIQIYQQKLHYIL 958

Query: 595  HVTNLFEWYMIISVF-LISCVYTKRTYIWQNHVGA--VAVLLGWSNLMGMIGQLPSVGTY 651
               NL  W + IS   +++  +     I   H  A  +AV L W  L+  + +   VG Y
Sbjct: 959  ETVNLISWVLYISALVMVTPAFQPDGGINTIHYSAASIAVFLSWFRLLLFLQRFDQVGIY 1018

Query: 652  VAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVF-------PSEDRFQNPIIGFINILVMM 704
            V MF  +    +K+   +  L++ F L F I+        P+   F N  +  +    MM
Sbjct: 1019 VVMFLEILQTLIKVLMVFSILIIAFGLAFYILLSKIIDPQPNHLSFSNIPMSLLRTFSMM 1078

Query: 705  TGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKTAG 764
             GEL+     + T  +  + +  T+ ++ ++FM+ + ++LMNLL+G+AV DI+ + + A 
Sbjct: 1079 LGELDFVGTYVNTYYRDQLKVPMTSFLILSVFMILMPILLMNLLIGLAVGDIESVRRNAQ 1138

Query: 765  LDKLVRQTELIHSLELALFQGYL 787
            L +L  Q  L   LE  L   +L
Sbjct: 1139 LKRLAMQVVLHTELERKLPHVWL 1161

Essential for thermotaxis by sensing environmental temperature. Receptor-activated non-selective cation channel involved in detection of sensations such as temperature. Involved in heat nociception by being activated by warm temperature of about 24-29 degrees Celsius.

Drosophila melanogaster (taxid: 7227)

>sp|O75762|TRPA1_HUMAN Transient receptor potential cation channel subfamily A member 1 OS=Homo sapiens GN=TRPA1 PE=2 SV=3

 Score =  147 bits (371), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 151/602 (25%), Positives = 260/602 (43%), Gaps = 80/602 (13%)

Query: 240 NNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLE 299
           +N G +PLH A  +G    +  +L   ++ +  K+K+++ + LH AA  G +   + LL+
Sbjct: 410 DNDGCTPLHYACRQGGPGSVNNLLGFNVS-IHSKSKDKK-SPLHFAASYGRINTCQRLLQ 467

Query: 300 NHANC---NERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLH-ASLSKN 355
           + ++    NE +     PLHLAAK    + +++LL+KG+ +  SD +  T LH AS+   
Sbjct: 468 DISDTRLLNEGDLHGMTPLHLAAKNGHDKVVQLLLKKGA-LFLSDHNGWTALHHASMGG- 525

Query: 356 ILSVHPLEILLKWGANVNAR-DIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGS- 413
                 ++++L        R D  G + +H AA    ++ V  L+ H ADI       S 
Sbjct: 526 --YTQTMKVILDTNLKCTDRLDEDGNTALHFAAREGHAKAVALLLSHNADIVLNKQQASF 583

Query: 414 -----------------------SALSIIMRNTPSSISSVRKK-----------LDSSIS 439
                                    L I   N+P +   + +            LD  + 
Sbjct: 584 LHLALHNKRKEVVLTIIRSKRWDECLKIFSHNSPGNKCPITEMIEYLPECMKVLLDFCML 643

Query: 440 LQDPEASTKDIELKLNFKYI------LQNGPDGEI-----GMLKIFQNDGQKEILEHPLC 488
               + S +D  ++ NFKY+       +  P  ++       L     + + E+L HP+C
Sbjct: 644 HSTEDKSCRDYYIEYNFKYLQCPLEFTKKTPTQDVIYEPLTALNAMVQNNRIELLNHPVC 703

Query: 489 EAFLYVKWEKMKKFYLFRLVLSSIFVLVLSVYVLTTLAQDCYNASKNITLFTPTFCTKNS 548
           + +L +KW      Y FR  + ++    L +  +T L     N    +   +     + S
Sbjct: 704 KEYLLMKWLA----YGFRAHMMNLGSYCLGLIPMTILV---VNIKPGMAFNSTGIINETS 756

Query: 549 EIGHFLLRNPDFMETVWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEW--YMII 606
           +    L     ++     +L  L++I    K  G + +   R Y   ++N+ EW  Y   
Sbjct: 757 DHSEILDTTNSYLIKTCMILVFLSSIFGYCKEAGQI-FQQKRNYFMDISNVLEWIIYTTG 815

Query: 607 SVFLISCVYTKRTYI-WQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKL 665
            +F++        ++ WQ   GA+AV   W N +  + +  + G ++ M   +    L+ 
Sbjct: 816 IIFVLPLFVEIPAHLQWQ--CGAIAVYFYWMNFLLYLQRFENCGIFIVMLEVILKTLLRS 873

Query: 666 FQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLL 725
              +I LL+ F L+F I+   +D F +P++  I    MM G++N  E  L      P L 
Sbjct: 874 TVVFIFLLLAFGLSFYILLNLQDPFSSPLLSIIQTFSMMLGDINYRESFL-----EPYLR 928

Query: 726 KGTAHIVFTI-----FMLFVTVVLMNLLVGIAVQDIQGLHKTAGLDKLVRQTELIHSLEL 780
              AH V +      F +FV +VLMNLL+G+AV DI  + K A L ++  Q EL  SLE 
Sbjct: 929 NELAHPVLSFAQLVSFTIFVPIVLMNLLIGLAVGDIAEVQKHASLKRIAMQVELHTSLEK 988

Query: 781 AL 782
            L
Sbjct: 989 KL 990

Receptor-activated non-selective cation channel involved in detection of pain and possibly also in cold perception and inner ear function. Has a central role in the pain response to endogenous inflammatory mediators and to a diverse array of volatile irritants, such as mustard oil, garlic and acrolein, an irritant from tears gas and vehicule exhaust fumes. Acts also as a ionotropic cannabinoid receptor by being activated by delta(9)-tetrahydrocannabinol (THC), the psychoactive component of marijuana. Not involved in menthol sensation. May be a component for the mechanosensitive transduction channel of hair cells in inner ear, thereby participating in the perception of sounds. Probably operated by a phosphatidylinositol second messenger system.

Homo sapiens (taxid: 9606)

>sp|Q8BLA8|TRPA1_MOUSE Transient receptor potential cation channel subfamily A member 1 OS=Mus musculus GN=Trpa1 PE=1 SV=1

 Score =  140 bits (352), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 178/760 (23%), Positives = 314/760 (41%), Gaps = 117/760 (15%)

Query: 109 MATLFSKASQAEKTTALLWCVFVKREDLLDALHQLGADLSNDKYGALHLAAFNGSIKGCS 168
           MA  F+    A     L+   +    D+++A+         ++   LH A+         
Sbjct: 275 MALHFAATQGATDIVKLMISSYTGSSDIVNAV-------DGNQETLLHRASLFDHHDLAE 327

Query: 169 WLMLHGHDINFT-KDSYTPLHFAV------LGNYVDCAKFLIKNKAHIHETIVHSAVST- 220
           +L+  G DIN T  +  +PL  A       + N + C    +  K H+    +H  V   
Sbjct: 328 YLISVGADINSTDSEGRSPLILATASASWNIVNLLLCKGAKVDIKDHLGRNFLHLTVQQP 387

Query: 221 -NAVDCVQLLLSLQ-INPNVLN--NKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKE 276
               +     + +Q I   V++  N G +PLH A  +G+   +  +L   ++ +  K+K+
Sbjct: 388 YGLRNLRPEFMQMQHIKELVMDEDNDGCTPLHYACRQGVPVSVNNLLGFNVS-IHSKSKD 446

Query: 277 RRVTALHLAAENGYVECLRILLENHANC---NERNHKEQIPLHLAAKCQSVECMEMLLRK 333
           ++ + LH AA  G +   + LL++ ++    NE +     PLHLAAK    + +++LL+K
Sbjct: 447 KK-SPLHFAASYGRINTCQRLLQDISDTRLLNEGDLHGMTPLHLAAKNGHDKVVQLLLKK 505

Query: 334 GSQVNASDCDNRTPLH-ASLSKNILSVHPLEILLKWGANVNAR-DIFGYSPIHIAALSEL 391
           G+ +  SD +  T LH AS+         ++++L        R D  G + +H AA    
Sbjct: 506 GA-LFLSDHNGWTALHHASMGG---YTQTMKVILDTNLKCTDRLDEEGNTALHFAAREGH 561

Query: 392 SQCVDCLIMHGADI------------------------SSKTPSGSSALSIIMRNTPSSI 427
           ++ V  L+ + ADI                        + +       L +   N+PS+ 
Sbjct: 562 AKAVAMLLSYNADILLNKKQASFLHIALHNKRKEVVLTTIRNKRWDECLQVFTHNSPSNR 621

Query: 428 SSVRKK-----------LDSSISLQDPEASTKDIELKLNFKYI------------LQNGP 464
             + +            LD  +     + S +D  ++ NFKY+             Q+  
Sbjct: 622 CPIMEMVEYLPECMKVLLDFCMIPSTEDKSCQDYHIEYNFKYLQCPLSMTKKVAPTQDVV 681

Query: 465 DGEIGMLKIFQNDGQKEILEHPLCEAFLYVKWEKMKKFYLFRLVLSSIFVLVLSVYVLTT 524
              + +L +     + E+L HP+C  +L +KW      Y FR  + ++    L +  +T 
Sbjct: 682 YEPLTILNVMVQHNRIELLNHPVCREYLLMKWCA----YGFRAHMMNLGSYCLGLIPMTL 737

Query: 525 LAQD-----CYNASKNITLFTPTFCTKNSEIGHFLLRNPDFMETVWYVLALLATIELIRK 579
           L         +N++  I   + T   +   +  F ++       +  +L  L++I     
Sbjct: 738 LVVKIQPGMAFNSTGIINGTSSTHEERIDTLNSFPIK-------ICMILVFLSSI----- 785

Query: 580 IFGLVE-----YASFREYCSHVTNLFEW--YMIISVFLISCVYTKRTYI-WQNHVGAVAV 631
            FG  +     +   R Y     N  EW  Y    +F++        Y+ WQ   GA+A+
Sbjct: 786 -FGYCKEVIQIFQQKRNYFLDYNNALEWVIYTTSIIFVLPLFLNIPAYMQWQ--CGAIAI 842

Query: 632 LLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQ 691
              W N +  + +  + G ++ M   +    L+    +I LL+ F L+F ++   +D F 
Sbjct: 843 FFYWMNFLLYLQRFENCGIFIVMLEVIFKTLLRSTGVFIFLLLAFGLSFYVLLNFQDAFS 902

Query: 692 NPIIGFINILVMMTGELNVN----EVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNL 747
            P++  I    MM G++N      E L   E   PVL  G        F +FV +VLMNL
Sbjct: 903 TPLLSLIQTFSMMLGDINYRDAFLEPLFRNELAYPVLTFGQ----LIAFTMFVPIVLMNL 958

Query: 748 LVGIAVQDIQGLHKTAGLDKLVRQTELIHSLELALFQGYL 787
           L+G+AV DI  + K A L ++  Q EL  +LE  L   YL
Sbjct: 959 LIGLAVGDIAEVQKHASLKRIAMQVELHTNLEKKLPLWYL 998

Receptor-activated non-selective cation channel involved in detection of pain and possibly also in cold perception and inner ear function. Has a central role in the pain response to endogenous inflammatory mediators and to a diverse array of volatile irritants, such as mustard oil, garlic and acrolein, an irritant from tears gas and vehicule exhaust fumes. Acts also as a ionotropic cannabinoid receptor by being activated by delta(9)-tetrahydrocannabinol (THC), the psychoactive component of marijuana. Not involved in menthol sensation. May be a component for the mechanosensitive transduction channel of hair cells in inner ear, thereby participating in the perception of sounds. Probably operated by a phosphatidylinositol second messenger system.

Mus musculus (taxid: 10090)

>sp|Q6RI86|TRPA1_RAT Transient receptor potential cation channel subfamily A member 1 OS=Rattus norvegicus GN=Trpa1 PE=2 SV=1

 Score =  138 bits (347), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 151/617 (24%), Positives = 263/617 (42%), Gaps = 98/617 (15%)

Query: 240 NNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLE 299
           +N G +PLH A  +G    +  +L   ++ V  K+K+++ + LH AA  G +   + LL+
Sbjct: 411 DNDGCTPLHYACRQGAPVSVNNLLRFNVS-VHSKSKDKK-SPLHFAASYGRINTCQRLLQ 468

Query: 300 NHANC---NERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLH-ASLSKN 355
           + ++    NE +     PLHLAAK    + +++LL+KG+ +  SD +  T LH AS+   
Sbjct: 469 DISDTRLLNEGDLHGMTPLHLAAKNGHDKVVQLLLKKGA-LFLSDHNGWTALHHASMGG- 526

Query: 356 ILSVHPLEILLKWGANVNAR-DIFGYSPIHIAALSELSQCVDCLIMHGADI--------- 405
                 ++++L        R D  G + +H AA    ++ V  L+ + ADI         
Sbjct: 527 --YTQTMKVILDTNLKCTDRLDEEGNTALHFAAREGHAKAVAMLLSYNADILLNKKQASF 584

Query: 406 ---------------SSKTPSGSSALSIIMRNTPSSISSVRKK-----------LDSSIS 439
                          + ++      L +   ++PS+   + +            LD  + 
Sbjct: 585 LHIALHNKRKEVVLTTIRSKRWDECLQVFTHDSPSNRCPIMEMVEYLPECMKVLLDFCMI 644

Query: 440 LQDPEASTKDIELKLNFKYI------------LQNGPDGEIGMLKIFQNDGQKEILEHPL 487
               + S +D  ++ NFKY+             Q+     + +L +     + E+L HP+
Sbjct: 645 PSTEDKSCQDYHIEYNFKYLQCPLSMTKKVTPTQDVIYEPLTILNVMVQHNRIELLNHPV 704

Query: 488 CEAFLYVKWEKMKKFYLFRLVLSSIFVLVLSVYVLTTLAQD-----CYNASKNITLFTPT 542
           C  +L +KW      Y FR  + ++    L +  +T L         +N++  I     T
Sbjct: 705 CREYLLMKWCA----YGFRAHMMNLGSYCLGLIPMTLLVVKIQPGMAFNSTGIINETIST 760

Query: 543 FCTKNSEIGHFLLRNPDFMETVWYVLALLATIELIRKIFGLVE-----YASFREYCSHVT 597
              + + +  F L+       +  +L  L++I      FG  +     +   R Y     
Sbjct: 761 HEERINTLNSFPLK-------ICMILVFLSSI------FGYCKEVVQIFQQKRNYFLDYN 807

Query: 598 NLFEW--YMIISVFLISCVYTKRTYI-WQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAM 654
           N  EW  Y    +F++        Y+ WQ   GA+A+   W N +  + +  + G ++ M
Sbjct: 808 NALEWVIYTTSMIFVLPLFLDIPAYMQWQ--CGAIAIFFYWMNFLLYLQRFENCGIFIVM 865

Query: 655 FSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFINILVMMTGELNVN--- 711
              +    L+    +I LL+ F L+F ++   +D F  P++  I    MM G++N     
Sbjct: 866 LEVIFKTLLRSTGVFIFLLLAFGLSFYVLLNFQDAFSTPLLSLIQTFSMMLGDINYRDAF 925

Query: 712 -EVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKTAGLDKLVR 770
            E L   E   PVL  G        F +FV +VLMNLL+G+AV DI  + K A L ++  
Sbjct: 926 LEPLFRNELAYPVLTFGQ----LIAFTMFVPIVLMNLLIGLAVGDIAEVQKHASLKRIAM 981

Query: 771 QTELIHSLELALFQGYL 787
           Q EL  +LE  L   YL
Sbjct: 982 QVELHTNLEKKLPFWYL 998

Receptor-activated non-selective cation channel involved in detection of pain and possibly also in cold perception and inner ear function. Has a central role in the pain response to endogenous inflammatory mediators and to a diverse array of volatile irritants, such as mustard oil, garlic and acrolein, an irritant from tears gas and vehicule exhaust fumes. Acts also as a ionotropic cannabinoid receptor by being activated by delta(9)-tetrahydrocannabinol (THC), the psychoactive component of marijuana. Not involved in menthol sensation. May be a component for the mechanosensitive transduction channel of hair cells in inner ear, thereby participating in the perception of sounds. Probably operated by a phosphatidylinositol second messenger system.

Rattus norvegicus (taxid: 10116)

>sp|Q4UMH6|Y381_RICFE Putative ankyrin repeat protein RF_0381 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=RF_0381 PE=4 SV=1

 Score =  131 bits (329), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 182/346 (52%), Gaps = 17/346 (4%)

Query: 87   KMSSGDVNVLYAIENSLYEPDEMATLFSKASQAEKTTALL-WCVFVKREDLLDALHQLGA 145
            K  +G+  + YA+E+     D ++ L    +       +L +       +L++ L +  A
Sbjct: 799  KTDNGETVLHYAVESG--NLDLVSLLIHNGANVNNAKTILHFAAKSGNLNLVNWLIKNKA 856

Query: 146  DL---SNDKYGALHLAAFNGSIKGCSWLMLHGHDINF-TKDSYTPLHFAVLGNYVDCAKF 201
            D+   +N     LH AA +G++   +WL+ +  DI+  T    T LHFA     ++   +
Sbjct: 857  DIHAKTNSGETILHFAAESGNLNLVNWLIKNKADIHAKTNSGETILHFAAKSGNLNLVNW 916

Query: 202  LIKNKAHIH------ETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGL 255
            LIKNKA IH      ETI+H A  +  ++ V  L+  + + +   N G + LH AA+ G 
Sbjct: 917  LIKNKADIHAKTNSGETILHFAAKSGNLNLVNWLIKNKADIHAKTNSGETILHFAAESGN 976

Query: 256  ISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPL 315
            ++ +  ++ +G  D++ KT +  +TALH A E+G +  + +L+    + N + +  +  L
Sbjct: 977  LNLVSLLIHNG-TDINTKTDDG-LTALHYAVESGNLNLVSLLIHKGIDVNAKTNSGETIL 1034

Query: 316  HLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNAR 375
            H A    S++ + +L+ +G+ VNA   D  T LH ++  + L++  + +L+ +GA+VNA+
Sbjct: 1035 HFAVDLGSLDLVSLLMVRGADVNAKTDDGLTALHYAVESDNLAL--VSLLMVYGADVNAK 1092

Query: 376  DIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMR 421
            +  G +P+H A +      V  LI +GADI++K  SG + L+ IM 
Sbjct: 1093 NNSGETPLHYAVIFNSLDLVSLLIHNGADINTKNNSGETVLNSIME 1138

Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (taxid: 315456)

>sp|Q12955|ANK3_HUMAN Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3

 Score =  125 bits (315), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 155/317 (48%), Gaps = 14/317 (4%)

Query: 115 KASQAEKTTALLWCVFVKREDLLDALHQLGAD---LSNDKYGALHLAAFNGSIKGCSWLM 171
           +A   +  T L     + + D++  L Q GA     +   Y  LHL+A  G     ++L+
Sbjct: 493 EAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLSAREGHEDVAAFLL 552

Query: 172 LHGHDINFT-KDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE------TIVHSAVSTNAVD 224
            HG  ++ T K  +TPLH A     ++ A  L++  A          T +H A   +   
Sbjct: 553 DHGASLSITTKKGFTPLHVAAKYGKLEVANLLLQKSASPDAAGKSGLTPLHVAAHYDNQK 612

Query: 225 CVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHL 284
              LLL    +P+     G +PLHIAA +  +     +L+ G AD +  T++  + ++HL
Sbjct: 613 VALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATTLLEYG-ADANAVTRQG-IASVHL 670

Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA+ G+V+ + +LL  +AN N  N     PLHLAA+   V   E+L+ +G+ V+A     
Sbjct: 671 AAQEGHVDMVSLLLGRNANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAHVDAQTKMG 730

Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
            TPLH       + +  +  LL+  A VNA+   GY+P+H AA    +  ++ L+ + A 
Sbjct: 731 YTPLHVGCHYGNIKI--VNFLLQHSAKVNAKTKNGYTPLHQAAQQGHTHIINVLLQNNAS 788

Query: 405 ISSKTPSGSSALSIIMR 421
            +  T +G++AL I  R
Sbjct: 789 PNELTVNGNTALGIARR 805

Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments.

Homo sapiens (taxid: 9606)

>sp|G5E8K5|ANK3_MOUSE Ankyrin-3 OS=Mus musculus GN=Ank3 PE=1 SV=1

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 156/317 (49%), Gaps = 14/317 (4%)

Query: 115 KASQAEKTTALLWCVFVKREDLLDALHQLGAD---LSNDKYGALHLAAFNGSIKGCSWLM 171
           +A   +  T L     + + D++  L Q GA     +   Y  LHLAA  G     ++L+
Sbjct: 476 EAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLAAREGHEDVAAFLL 535

Query: 172 LHGHDINFT-KDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE------TIVHSAVSTNAVD 224
            HG  ++ T K  +TPLH A     ++ A  L++  A          T +H A   +   
Sbjct: 536 DHGASLSITTKKGFTPLHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAHYDNQK 595

Query: 225 CVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHL 284
              LLL    +P+     G +PLHIAA +  +    ++L+ G AD +  T++  + ++HL
Sbjct: 596 VALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATSLLEYG-ADANAVTRQG-IASVHL 653

Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA+ G+V+ + +LL  +AN N  N     PLHLAA+   V   E+L+ +G+ V+A     
Sbjct: 654 AAQEGHVDMVSLLLSRNANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAHVDAQTKMG 713

Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
            TPLH       + +  +  LL+  A VNA+   GY+ +H AA    +  ++ L+ + A 
Sbjct: 714 YTPLHVGCHYGNIKI--VNFLLQHSAKVNAKTKNGYTALHQAAQQGHTHIINVLLQNNAS 771

Query: 405 ISSKTPSGSSALSIIMR 421
            +  T +G++AL+I  R
Sbjct: 772 PNELTVNGNTALAIARR 788

Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments (By similarity). In skeletal muscle, required for costamere localization of DMD and betaDAG1.

Mus musculus (taxid: 10090)

>sp|Q8NFD2|ANKK1_HUMAN Ankyrin repeat and protein kinase domain-containing protein 1 OS=Homo sapiens GN=ANKK1 PE=2 SV=1

 Score =  124 bits (310), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 166/365 (45%), Gaps = 49/365 (13%)

Query: 119 AEKTTALLWCVFVKREDLLDALHQLGAD---LSNDKYGALHLAAFNGSIKGCSWLMLHGH 175
           A   T LL     ++ DL   L   GAD   +  D +  LH AA NG       L+ HG 
Sbjct: 393 ASGYTPLLIAAQDQQPDLCALLLAHGADANRVDEDGWAPLHFAAQNGDDGTARLLLDHGA 452

Query: 176 DINFT-KDSYTPLHFAVLGNYVDCAKFLIKNKA--HIHE--------------------- 211
            ++   ++ +TPLH A   N+ + A+ L+  +A  ++HE                     
Sbjct: 453 CVDAQEREGWTPLHLAAQNNFENVARLLVSRQADPNLHEAEGKTPLHVAAYFGHVSLVKL 512

Query: 212 ----------------TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGL 255
                           T +H AV    V  +Q LL     P+ L+  G  PLH AA RG 
Sbjct: 513 LTSQGAELDAQQRNLRTPLHLAVERGKVRAIQHLLKSGAVPDALDQSGYGPLHTAAARGK 572

Query: 256 ISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPL 315
               K +L  G A +++ T +   T LHLAA  G++E + +L E+HAN          PL
Sbjct: 573 YLICKMLLRYG-ASLELPTHQG-WTPLHLAAYKGHLEIIHLLAESHANMGALGAVNWTPL 630

Query: 316 HLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKN-ILSVHPLEILLKWGANVNA 374
           HLAA+      +  LL+ G+  NA++    TPLH ++ ++  LSV     LL+  ANV+A
Sbjct: 631 HLAARHGEEAVVSALLQCGADPNAAEQSGWTPLHLAVQRSTFLSV---INLLEHHANVHA 687

Query: 375 RDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKL 434
           R+  G++P H+AAL   +  +  L+  GA +  +     + L + +R+    I S  +  
Sbjct: 688 RNKVGWTPAHLAALKGNTAILKVLVEAGAQLDVQDGVSCTPLQLALRSRKQGIMSFLEGK 747

Query: 435 DSSIS 439
           + S++
Sbjct: 748 EPSVA 752

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	854
91079404	967	PREDICTED: similar to CG31284 CG31284-PA	0.920	0.812	0.492	0.0
242020390	1022	ankyrin repeat-containing protein, putat	0.971	0.812	0.462	0.0
195445591	987	GK12029 [Drosophila willistoni] gi|19416	0.912	0.789	0.475	0.0
195110607	986	GI24766 [Drosophila mojavensis] gi|19391	0.916	0.794	0.472	0.0
312383637	1029	hypothetical protein AND_03127 [Anophele	0.913	0.758	0.463	0.0
125777995	991	GA16147, isoform A [Drosophila pseudoobs	0.916	0.790	0.469	0.0
390179385	943	GA16147, isoform B [Drosophila pseudoobs	0.916	0.830	0.469	0.0
170047632	979	conserved hypothetical protein [Culex qu	0.915	0.798	0.462	0.0
195036800	989	GH18568 [Drosophila grimshawi] gi|193894	0.916	0.791	0.470	0.0
195392489	987	GJ22553 [Drosophila virilis] gi|19415297	0.916	0.793	0.472	0.0

>gi|91079404|ref|XP_966629.1| PREDICTED: similar to CG31284 CG31284-PA [Tribolium castaneum] gi|270004822|gb|EFA01270.1| hypothetical protein TcasGA2_TC002715 [Tribolium castaneum]

 Score =  778 bits (2009), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/806 (49%), Positives = 548/806 (67%), Gaps = 20/806 (2%)

Query: 59  DSLEETISDELSYKVCKESIRASLLEAMKMSSGDVNVLYAIENSLYEPDEMATLFSKASQ 118
           +S EE    EL+ ++C ++I+ +LLE MKM+SG   +L  IE      D +   F  A++
Sbjct: 81  ESFEEFSRSELTVQICHDTIKMNLLEHMKMASGRHQLLDDIECKKTTQDTLTEAFQGATK 140

Query: 119 AEKTTALLWCVFVKREDLLDALHQLGADL----SNDKYGALHLAAFNGSIKGCSWLMLHG 174
            E   A LW  F+KR +LLD L +LGA L     +    ALHLA+F+G I G  +L+  G
Sbjct: 141 LEINIAFLWAAFMKRWELLDGLLKLGAQLRYYEPSQGLSALHLASFSGCIPGTQFLLAQG 200

Query: 175 HDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHI----------HETIVHSAVSTNAVD 224
            D+N     YTPLH +  G+  + A  L+ N A +          HE+++H AV  NA+ 
Sbjct: 201 CDVNAIFKCYTPLHCSAFGDSPETAMILLNNGAKVQALTNSPNNCHESVLHCAVRANAIA 260

Query: 225 CVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHL 284
           CV+L  +   +       G+SP+H+AAD G   CLK +L++   +V+ KTKE+ +T LHL
Sbjct: 261 CVRLFTAEGADVGQFEFSGMSPVHLAADLGHPQCLKIMLEAKGVNVNAKTKEKELTPLHL 320

Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKG-SQVNASDCD 343
           AAE GYVEC+ ILL+  A+ N RNH+ Q PLHLAA+ Q+ +C+EMLLRKG +  N  D D
Sbjct: 321 AAEGGYVECVEILLDKGADANIRNHRGQTPLHLAARAQAYDCVEMLLRKGNADPNIGDFD 380

Query: 344 NRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGA 403
            RTPLHA++ K   S   +EIL+ WGA+VN +D +GY+P+HIAAL+ELSQCV+ LI HGA
Sbjct: 381 KRTPLHAAVCKAARSYDIIEILVSWGADVNTKDQYGYTPLHIAALNELSQCVEILIYHGA 440

Query: 404 DISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQD-PEASTKDIELKLNFKYILQN 462
           D+++K+  G +AL II R TP+S++ V  KLDS+I+L   PE+S +++EL+L+F+ ILQ+
Sbjct: 441 DVTAKSKFGMTALGIITRKTPASLAMVTHKLDSAITLHHHPESSNREVELRLDFRSILQH 500

Query: 463 GPDGEIGMLKIFQNDGQKEILEHPLCEAFLYVKWEKMKKFYLFRLVLSSIFVLVLSVYVL 522
               EI  L  F ++GQKEIL HPLC AFLY+KWEK++K+Y+ R++   IFVL LS+YVL
Sbjct: 501 CHPREISFLNTFVDEGQKEILLHPLCSAFLYLKWEKIRKYYIARMLFCFIFVLSLSLYVL 560

Query: 523 TTLAQDCYNASKNITLFTPT----FCTKNSEIGHFLLRNPDFMETVWYVLALLATIELIR 578
           T LA +CYN  KN+    P      C K S +GH L  NP  +E  W+VL  +   E++R
Sbjct: 561 TALAHNCYNHGKNMNDTQPQNVIELCEKKSMMGHMLRTNPFVIEMQWFVLVGITCCEILR 620

Query: 579 KIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNL 638
           K++G+  Y + ++Y SH  N+ EW +++SVF+IS +YT RTY WQNH+GA AVL GW+NL
Sbjct: 621 KVYGIAGYPTVKQYLSHPENIIEWTVVVSVFVISFIYTGRTYTWQNHIGAFAVLFGWTNL 680

Query: 639 MGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFI 698
           M MIGQLP  G+YVAM++RVQ EF KL  AY CLL+GFT++FC++FP    F NP IG I
Sbjct: 681 MLMIGQLPVFGSYVAMYTRVQGEFAKLLLAYSCLLIGFTISFCVIFPDSSTFANPFIGLI 740

Query: 699 NILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQG 758
            +LVMMTGELN++ ++      PP LL+ +A + + +F+LFVTV+LMNLLVGIAV DIQG
Sbjct: 741 TVLVMMTGELNLDLLVDDDPEDPPFLLEISAQVTYILFLLFVTVILMNLLVGIAVHDIQG 800

Query: 759 LHKTAGLDKLVRQTELIHSLELALFQGYLPNRIVSMLKSQALLTPSSYTVALNVKPLNPR 818
           L KTAGL KLVRQT+LI  +ELALF GYLP  ++++L   AL++P +Y V LNVKPLNPR
Sbjct: 801 LQKTAGLSKLVRQTKLISYMELALFNGYLPRYLLNLLHWTALVSPKAYRVVLNVKPLNPR 860

Query: 819 ETRLPKEVMLNALDIARQRRIDPHFI 844
           E RLP++++  A +IA++R+   H I
Sbjct: 861 EKRLPRDILKAAHEIAKKRKHYAHTI 886

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242020390|ref|XP_002430638.1| ankyrin repeat-containing protein, putative [Pediculus humanus corporis] gi|212515810|gb|EEB17900.1| ankyrin repeat-containing protein, putative [Pediculus humanus corporis]

 Score =  768 bits (1982), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/872 (46%), Positives = 565/872 (64%), Gaps = 42/872 (4%)

Query: 6   KKNTLDRSRSFNND---------TRFPLALMRSKT---SKSYSTKKAMFNQLNDEKPTMV 53
           +K   DRS SF  +          R P  L R K+    ++   +++    L D   + +
Sbjct: 11  QKQPFDRSISFGRELSVIDTSQKCRTPSFLERLKSFGEDRASMLQRSKHIDLEDSSSSAL 70

Query: 54  DNM-RTDSLEET-ISDELSYKVCKESIRASLLEAMKMSSGDVNVLYAIENSLYEPDEMAT 111
           D++   DS EE     + +  V ++ +R ++L+ MK  SG+V +L  IE      + +  
Sbjct: 71  DDIIFLDSFEEIHQKGDANVLVSRDVVRQNILDMMKSGSGNVKLLTDIETGNTSVNNIEE 130

Query: 112 LFSKASQAEKTTALLWCVFVKREDLLDALHQLGADLSNDK----YGALHLAAFNGSIKGC 167
            F+ +SQ EK    LW VF +R DLLD   Q   D++  +    +  LHL++F+G     
Sbjct: 131 HFANSSQFEKNVGFLWSVFHRRRDLLDYFLQFNVDVNFSEPQLGFTPLHLSSFSGCNNCT 190

Query: 168 SWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHI------HETIVHSAVSTN 221
           + L+  G D+N   + YTPLH A  GN    AK L+K  A I      +ET +HSAV + 
Sbjct: 191 ALLISKGADVNTLTNKYTPLHCAAFGNAASTAKLLLKAGAKIVSEKVCNETPIHSAVRSK 250

Query: 222 AVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTA 281
           AVDC+QL ++  ++ + +   G SPLH+AAD G + CL+ +L+S   D++++T ER+ +A
Sbjct: 251 AVDCLQLFITENMDLSNMGGCGYSPLHLAADLGHLQCLQILLNSNKCDINLQTLERKCSA 310

Query: 282 LHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASD 341
           LHLAAENGY ECL+ LLE  A+ N  N+++Q PLH AAK  S E +E+LL+ G+  N+ D
Sbjct: 311 LHLAAENGYYECLKTLLEYGADSNAVNYRQQTPLHAAAKVCS-ESVELLLKYGADPNSPD 369

Query: 342 CDNRTPLHASLSKNILSVHPLEIL---LKWGANVNARDIFGYSPIHIAALSELSQCVDCL 398
            DNRTP+HA++ K   S H LEIL     W  +VN RD +GY+P+HIAAL+EL++CV+CL
Sbjct: 370 ADNRTPMHAAVCK-CESEHSLEILDYLTMWKGDVNRRDKYGYTPLHIAALNELTECVECL 428

Query: 399 IMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQDPEASTKDIELKLNFKY 458
           I+ G+D++++T  G+SALSII R TP+++ +V +KLD SI+  DP+AS K+I L  NF+Y
Sbjct: 429 ILSGSDVTARTRGGTSALSIISRKTPAALGAVNQKLDESITTNDPDAS-KEIVLMFNFRY 487

Query: 459 ILQNGPDGEIGMLKIFQNDGQKEILEHPLCEAFLYVKWEKMKKFYLFRLVLSSIFVLVLS 518
           +L+N   GE+  L+   ++GQKE L HPLCEAFL++KW+K++K+Y+ RL+   +FV++LS
Sbjct: 488 LLKNCKRGEVSFLQTLVDEGQKEFLSHPLCEAFLHLKWQKIRKYYITRLIFCLLFVILLS 547

Query: 519 VYVLTTLAQDCYNAS---------KNITLFTPTFCTKNSEIGHFLLRNPDFMETVWYVLA 569
           +YVLT LA  CYN S           I +  P  CTK S  G  L RNP  ME  W+ L 
Sbjct: 548 LYVLTALAYQCYNDSVSDVFPDVEARILIVDPELCTKKSYFGELLRRNPIIMEMEWFFLV 607

Query: 570 LLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAV 629
            +  +E+ RKI+G   Y SFR Y S   N+ EW++++SVFLIS VYT RTYIWQNHVGA+
Sbjct: 608 FITVLEIFRKIYGFRGYKSFRHYISQKGNIVEWFVVLSVFLISFVYTGRTYIWQNHVGAL 667

Query: 630 AVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDR 689
           AVL GW+NLM MIG LP  G+YVAM+++VQ EF KLF AYICLL+GFT+ FC++FP   +
Sbjct: 668 AVLCGWANLMIMIGNLPIFGSYVAMYTKVQKEFTKLFLAYICLLIGFTVCFCVIFPKAKQ 727

Query: 690 FQNPIIGFINILVMMTGELNVNEVL---LGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMN 746
           F NP +  I ILVMMTGEL  + +L      E+    LL+ +A   F  F+LFVT++LMN
Sbjct: 728 FSNPFVAVIKILVMMTGELEFDSLLENITQEESHSATLLEISALTTFVFFLLFVTIILMN 787

Query: 747 LLVGIAVQDIQGLHKTAGLDKLVRQTELIHSLELALFQGYLPNRIVSMLKSQALLTPSSY 806
           LL+GIAV DIQGL KTA L KLV QT+LI  +E ALF G LPN  + +L+  AL++PSSY
Sbjct: 788 LLIGIAVHDIQGLQKTAVLSKLVGQTKLITHIESALFNGCLPNCFLKLLQITALISPSSY 847

Query: 807 TVALNVKPLNPRETRLPKEVMLNALDIARQRR 838
            V ++VKPLNPRETRLP++VM + L +A+Q+R
Sbjct: 848 RVVVSVKPLNPRETRLPQDVMRSGLKVAKQKR 879

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195445591|ref|XP_002070395.1| GK12029 [Drosophila willistoni] gi|194166480|gb|EDW81381.1| GK12029 [Drosophila willistoni]

 Score =  763 bits (1970), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/806 (47%), Positives = 546/806 (67%), Gaps = 27/806 (3%)

Query: 59  DSLEETISDELSYKVCKESIRASLLEAMKMSSGDVNVLYAIENSLYEPDEMATLFSKASQ 118
           DS EE  S ELS ++C +++R SL++ MK S+G V     IE      +   T F  AS+
Sbjct: 89  DSFEEPTS-ELSVQICNDTLRISLIDQMKSSAGRVRFFEDIEQGNVIAENTKTHFESASK 147

Query: 119 AEKTTALLWCVFVKREDLLDALHQLGADLS---NDKYGALHLAAFNGSIKGCSWLMLHGH 175
            EK  + LW  F+KR DL+++L   GADLS    +   ALHL AF+G +     L+  G 
Sbjct: 148 LEKNLSYLWSAFLKRWDLIESLLDAGADLSFCDQNGISALHLGAFSGCLATLGLLVAKGL 207

Query: 176 DINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHI---------HETIVHSAVSTNAVDCV 226
           ++N     YTPLH A  GN  + AKFLI N A I          E+++H AV +NA++C+
Sbjct: 208 NVNLQSKCYTPLHCAAFGNASEAAKFLINNGADITKDTNKPNCEESLLHCAVRSNALECL 267

Query: 227 QLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKT--KERRVTALHL 284
           Q+ +S   + N L   G + +H+AAD G I CL+ +L++  AD +++   +E+  TALHL
Sbjct: 268 QIFISEGADVNSLKPNGTNAIHLAADLGNIQCLETLLNAPGADANVRICIREKESTALHL 327

Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKG-SQVNASDCD 343
           AA+ G VEC+ +LL   A+   +NH+   PLHLAA+  S+EC+E LLR G +  NA D D
Sbjct: 328 AADEGNVECVDLLLSKGADAKLKNHRGFTPLHLAARTSSLECVESLLRNGNADANAEDFD 387

Query: 344 NRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGA 403
           +RTPLHA++ K+  +   +E L++WGANVN +DI+G++ +H+AAL  L QCV+ LI HGA
Sbjct: 388 HRTPLHAAVGKSENAYDIMETLIQWGANVNHKDIYGFTALHLAALDGLVQCVEMLIFHGA 447

Query: 404 DISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISL---QDPEASTKDIELKLNFKYIL 460
           D+++K+  G+SAL++I R TP+S++ +R+KLD++I+L   QDP    +++EL+L+F+ +L
Sbjct: 448 DVTTKSKKGTSALNVITRKTPASVAMIRQKLDAAITLHHSQDP--VNREVELELDFRQLL 505

Query: 461 QNGPDGEIGMLKIFQNDGQKEILEHPLCEAFLYVKWEKMKKFYLFRLVLSSIFVLVLSVY 520
           Q+    EI  L  F ++GQKEILEHPLC +FLY+KW K++K+Y+ RL+    FVL L++Y
Sbjct: 506 QHCHPREISYLNTFVDEGQKEILEHPLCSSFLYIKWGKIRKYYIGRLIFCFSFVLFLTLY 565

Query: 521 VLTTLAQDCYNASK--NITLFTPTFCTKNSEIGHFLLRNPDFMETVWYVLALLATIELIR 578
           VLT LA +CYN SK  N T+     C K S +G  L  NP  ME  W+VL  +  +E+ R
Sbjct: 566 VLTALAHNCYNGSKDDNTTIQAQELCQKQSILGDMLRNNPFVMEMQWWVLVAITIVEIFR 625

Query: 579 KIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNL 638
           K++G+  Y+SFR Y + V N+ EW++I SVF+IS +YTK+TY +QNH+GA AVLLGW+NL
Sbjct: 626 KLYGITGYSSFRHYVTQVENIMEWFVITSVFVISYIYTKQTYTFQNHIGAFAVLLGWTNL 685

Query: 639 MGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFI 698
           M MIGQLP    YVAM++RVQ EF KLF AY C+L+GFT++FC++FPS   F NP +GFI
Sbjct: 686 MLMIGQLPVFDVYVAMYTRVQGEFAKLFMAYSCMLIGFTISFCVIFPSSSSFANPFMGFI 745

Query: 699 NILVMMTGELNVNEVLLGTEAK-PPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQ 757
            +LVMM GE +++ ++   + K PP LL+ +A I F +F+LFVT++LMNLLVGIAV DIQ
Sbjct: 746 TVLVMMIGEQDLSLLINDPDGKDPPFLLEVSAQITFVLFLLFVTIILMNLLVGIAVHDIQ 805

Query: 758 GLHKTAGLDKLVRQTELIHSLELALFQGYLPNRIVSMLKSQALLTPSSYTVALNVKPLNP 817
           GL KTAGL KLVRQT+LI  +E ALF GYLP  + ++L   AL++P +Y V L VKPLNP
Sbjct: 806 GLKKTAGLSKLVRQTKLISYIESALFNGYLPTWLRNLLHYTALVSPQAYRVVLCVKPLNP 865

Query: 818 RETRLPKEVMLNALDIARQRRIDPHF 843
            E RLP+++++ A ++ + R+   HF
Sbjct: 866 SEKRLPRDILMKAYEVGKMRK---HF 888

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195110607|ref|XP_001999871.1| GI24766 [Drosophila mojavensis] gi|193916465|gb|EDW15332.1| GI24766 [Drosophila mojavensis]

 Score =  763 bits (1969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/807 (47%), Positives = 548/807 (67%), Gaps = 24/807 (2%)

Query: 59  DSLEETISDELSYKVCKESIRASLLEAMKMSSGDVNVLYAIENSLYEPDEMATLFSKASQ 118
           DS EE  S ELS ++C +++R SL++ MK ++G V +   IE      + +   F  AS+
Sbjct: 89  DSFEEPTS-ELSVQICNDTLRISLIDQMKSAAGRVRLFEDIEQGNVVAESIGAHFETASK 147

Query: 119 AEKTTALLWCVFVKREDLLDALHQLGADL---SNDKYGALHLAAFNGSIKGCSWLMLHGH 175
            EK    LW  F+KR DLL+ L + GADL     +   ALHL+AF+G +   + L+  G 
Sbjct: 148 LEKNLCYLWAAFLKRWDLLEGLLKAGADLHFYDQNGISALHLSAFSGCLATLNLLVAKGI 207

Query: 176 DINFTKDSYTPLHFAVLGNYVDCAKFLIK---------NKAHIHETIVHSAVSTNAVDCV 226
           ++N     YTPLH A  GN V+ AKFLI          NK +  E+++H AV +NA++C+
Sbjct: 208 NVNLQPKCYTPLHCAAFGNAVEAAKFLINSGALITKDTNKPNCEESLLHCAVRSNALECL 267

Query: 227 QLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKT--KERRVTALHL 284
           QL +    + N L   G + +H+AAD G + CL+A+L++  AD +++   +E+  TALHL
Sbjct: 268 QLFIGEGADVNSLKPNGTNAIHLAADLGHLQCLEALLNAPNADANVRICIREKESTALHL 327

Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKG-SQVNASDCD 343
           AA+ G VEC+ +LL   A+   +NH+   PLHLAA+  S+EC+E LLR G +  NA D D
Sbjct: 328 AADEGNVECVDLLLSKGADAKLKNHRGFTPLHLAARTSSLECVESLLRNGNADANAEDFD 387

Query: 344 NRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGA 403
           +RTPLHA++ K+  +   +E L++WGANVN +DI+G++ +H+AAL  L QCV+ LI HGA
Sbjct: 388 HRTPLHAAVGKSENAYDIMETLIQWGANVNHKDIYGFTALHLAALDGLVQCVEMLIYHGA 447

Query: 404 DISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISL---QDPEASTKDIELKLNFKYIL 460
           D+++K+  G+SAL++I R TP+S++ +R+KLD++I+L   QDP    +++EL+L+F+ +L
Sbjct: 448 DVTTKSKKGTSALNVITRKTPASVAMIRQKLDAAITLHHSQDP--VNREVELELDFRQLL 505

Query: 461 QNGPDGEIGMLKIFQNDGQKEILEHPLCEAFLYVKWEKMKKFYLFRLVLSSIFVLVLSVY 520
           Q+    EI  L  F ++GQKEILEHPLC +FLY+KW K++K+Y+ RL+    FVL L++Y
Sbjct: 506 QHCHPREISYLNTFVDEGQKEILEHPLCSSFLYIKWGKIRKYYIGRLIFCFSFVLFLTLY 565

Query: 521 VLTTLAQDCYNASK--NITLFTPTFCTKNSEIGHFLLRNPDFMETVWYVLALLATIELIR 578
           VLT LA +CYN SK  N T+     C K S +G  L  NP  ME  W+VL  +  +E+ R
Sbjct: 566 VLTALAHNCYNGSKDDNTTIQAQELCQKQSILGDMLRNNPFVMEMQWWVLVAITIVEIFR 625

Query: 579 KIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNL 638
           K++G+  Y+SFR Y + V N+ EW++I SVF+IS +YTK+TY +QNH+GA AVLLGW+NL
Sbjct: 626 KLYGITGYSSFRHYVTQVENIMEWFVITSVFVISYIYTKQTYTFQNHIGAFAVLLGWTNL 685

Query: 639 MGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFI 698
           M MIGQLP    YVAM++RVQ EF KLF AY C+L+GFT++FC++FPS   F NP +GFI
Sbjct: 686 MLMIGQLPVFDVYVAMYTRVQGEFAKLFMAYSCMLIGFTISFCVIFPSSSSFANPFMGFI 745

Query: 699 NILVMMTGELNVNEVLLGTEAK-PPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQ 757
            +LVMM GE +++ ++   + K PP LL+ +A I F +F+LFVT++LMNLLVGIAV DIQ
Sbjct: 746 TVLVMMIGEQDLSLLINDPDGKDPPFLLEVSAQITFVLFLLFVTIILMNLLVGIAVHDIQ 805

Query: 758 GLHKTAGLDKLVRQTELIHSLELALFQGYLPNRIVSMLKSQALLTPSSYTVALNVKPLNP 817
           GL KTAGL KLVRQT+LI  +E ALF GYLP  + ++L   AL++P +Y V L VKPLNP
Sbjct: 806 GLKKTAGLSKLVRQTKLISYIESALFNGYLPTWLRNLLHYTALVSPQAYRVVLCVKPLNP 865

Query: 818 RETRLPKEVMLNALDIARQRRIDPHFI 844
            E RLP+++++ A ++ + R+   H I
Sbjct: 866 SEKRLPRDILMKAYEVGKMRKHFGHTI 892

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312383637|gb|EFR28646.1| hypothetical protein AND_03127 [Anopheles darlingi]

 Score =  752 bits (1942), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/803 (46%), Positives = 549/803 (68%), Gaps = 23/803 (2%)

Query: 59  DSLEETISDELSYKVCKESIRASLLEAMKMSSGDVNVLYAIENSLYEPDEMATLFSKASQ 118
           DS EE  S+E + ++  ESIR +L+E +++SSG V++L +IE        +   F  AS+
Sbjct: 77  DSYEEYPSNEATIEISYESIRTALIEQIRLSSGRVHLLDSIEQGNMVAPNVRDYFGGASK 136

Query: 119 AEKTTALLWCVFVKREDLLDALHQLGADLS---NDKYGALHLAAFNGSIKGCSWLMLHGH 175
           AEK  + LW  FVKR DLLDAL + G++L+    + + ALHL+AF+G +   S L+  G 
Sbjct: 137 AEKNISFLWAAFVKRWDLLDALMECGSELAYHDTNGFTALHLSAFSGCLNCASILVSKGI 196

Query: 176 DINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIH---------ETIVHSAVSTNAVDCV 226
           D+N    +YTPLH A  GN    A FLI   A +          E+++H AV  N++DCV
Sbjct: 197 DVNQQPKAYTPLHCAAFGNAAHTALFLINKGARLELTTRRPNGEESLLHCAVRANSIDCV 256

Query: 227 QLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKT--KERRVTALHL 284
           +L ++  +  N +   G++ +H+AAD G ++CL+ +L +  AD +I+   +E+  TALHL
Sbjct: 257 RLFIAEGMEVNSIKPSGMNAIHLAADLGHVACLQVLLAAPGADPNIRIGIREKESTALHL 316

Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGS-QVNASDCD 343
           AA+ G  EC+ +LLE  A    +NH+   PLHLA++  S+EC+E+LLR GS   N  D D
Sbjct: 317 AADEGNSECVALLLERGAEARLKNHRGFTPLHLASRTSSLECVELLLRLGSADPNEEDFD 376

Query: 344 NRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGA 403
            RTPLH ++ ++  + H +E L+ WGA+VN +D+FG++P+H+AAL  L+ CV+ L+ + A
Sbjct: 377 MRTPLHTAIGRSESAFHIIEALICWGADVNRKDVFGFTPLHLAALDGLAHCVEILLFYDA 436

Query: 404 DISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISL---QDPEASTKDIELKLNFKYIL 460
           D+++KT  G++AL++I R TP S++ + KK D +++L   Q+P  S K++EL+L+F+ IL
Sbjct: 437 DVTAKTKKGTTALNVITRKTPGSLAMITKKFDDAMTLMHSQNP--SEKEVELELDFRTIL 494

Query: 461 QNGPDGEIGMLKIFQNDGQKEILEHPLCEAFLYVKWEKMKKFYLFRLVLSSIFVLVLSVY 520
           Q+    EI  L    ++GQKEIL+HPLC AF+Y+KW K++K+Y+ RL+   IF+L L++Y
Sbjct: 495 QHCYPREISYLNTLVDEGQKEILQHPLCSAFIYIKWGKIRKYYIARLLFCFIFILFLTLY 554

Query: 521 VLTTLAQDCYNASKNI--TLFTPTFCTKNSEIGHFLLRNPDFMETVWYVLALLATIELIR 578
           VLT LA +CYN SK++  T+     C K S +G+ L RNP  ME  W VL  +  +E+ R
Sbjct: 555 VLTALAHNCYNGSKDMEETIQEQELCQKQSILGNMLRRNPFVMEMQWLVLVAITFVEICR 614

Query: 579 KIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNL 638
           K++G+  Y+S R Y + + N+ EW++I+SVF+IS +YTKRTY WQNH+GA AVLLGW++L
Sbjct: 615 KLYGITGYSSIRRYVTQMENITEWFIIVSVFVISYIYTKRTYTWQNHIGAFAVLLGWTHL 674

Query: 639 MGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFI 698
           M MIGQLP  G YVAM+++VQ+EF KLF AY C+L+GFT++FC++FPS   F+NP +GFI
Sbjct: 675 MVMIGQLPVFGAYVAMYTKVQVEFAKLFIAYSCMLIGFTISFCVIFPSSSSFENPFMGFI 734

Query: 699 NILVMMTGELNVNEVLLGTEAK-PPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQ 757
            +LVMM GEL++  ++   + K PP +L+ +A I F +F+LFVTV+LMNLLVGIAV DIQ
Sbjct: 735 TVLVMMVGELDLELLINDPDGKDPPFMLELSAQITFVLFLLFVTVILMNLLVGIAVDDIQ 794

Query: 758 GLHKTAGLDKLVRQTELIHSLELALFQGYLPNRIVSMLKSQALLTPSSYTVALNVKPLNP 817
            L KTA L KLV QT+LI  +E ALF G+LPN + S+L   AL++P +Y V L+VKPLNP
Sbjct: 795 ALKKTATLSKLVGQTKLISYIESALFNGWLPNWLRSLLHYTALVSPRAYRVILSVKPLNP 854

Query: 818 RETRLPKEVMLNALDIARQRRID 840
            E RLP+ +M+ A +IA+++ + 
Sbjct: 855 EEKRLPRNIMMAAYEIAKEKELQ 877

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|125777995|ref|XP_001359798.1| GA16147, isoform A [Drosophila pseudoobscura pseudoobscura] gi|54639548|gb|EAL28950.1| GA16147, isoform A [Drosophila pseudoobscura pseudoobscura]

 Score =  751 bits (1938), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/807 (46%), Positives = 548/807 (67%), Gaps = 24/807 (2%)

Query: 59  DSLEETISDELSYKVCKESIRASLLEAMKMSSGDVNVLYAIENSLYEPDEMATLFSKASQ 118
           DS EE  S ELS ++C +++R SL++ MK ++G V +   IE      +   T F  AS+
Sbjct: 90  DSFEEPTS-ELSVQICNDTLRISLIDQMKSATGRVRLFEDIEQGNVVAESTKTHFESASK 148

Query: 119 AEKTTALLWCVFVKREDLLDALHQLGADL---SNDKYGALHLAAFNGSIKGCSWLMLHGH 175
            EK    LW  F+KR DL++ L ++GADL     +   ++HLAAF+G +     L+  G 
Sbjct: 149 LEKNLCYLWAAFLKRWDLIEGLMEVGADLHFCDQNGISSMHLAAFSGCLATLGLLVSKGM 208

Query: 176 DINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHI---------HETIVHSAVSTNAVDCV 226
           ++N     YTPLH A  GN  + AKFLI N A I          E+++H AV +NA++C+
Sbjct: 209 NVNLQSKCYTPLHCAAFGNAAEAAKFLINNGADITKDTNKPNCEESLLHCAVRSNALECL 268

Query: 227 QLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKT--KERRVTALHL 284
           Q+ +S   + N L   G + +H+AAD G + CL+A+L++  AD +++   +E+  TALHL
Sbjct: 269 QIFISEGADVNSLKPNGTNAIHLAADLGNMQCLEALLNAPNADANVRICIREKESTALHL 328

Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKG-SQVNASDCD 343
           AA+ G VEC+ +LL   A+   +NH+   PLHLAA+  S+EC+E LLR G +  NA D D
Sbjct: 329 AADEGNVECVDLLLAKGADAKLKNHRGFTPLHLAARTSSLECVESLLRNGNADANAEDFD 388

Query: 344 NRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGA 403
           +RTPLHA++ K+  +   +E L++WGANVN +DI+G++ +H+AAL  L QCV+ LI HGA
Sbjct: 389 HRTPLHAAVGKSENAYDIMETLIQWGANVNHKDIYGFTALHLAALDGLVQCVEMLIFHGA 448

Query: 404 DISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISL---QDPEASTKDIELKLNFKYIL 460
           D+++K+  G+SAL++I R TPSS++ +R+KLD++I+L   QDP    +++EL+L+F+ +L
Sbjct: 449 DVTTKSKKGTSALNVITRKTPSSVAMIRQKLDAAITLHHSQDP--VNREVELELDFRQLL 506

Query: 461 QNGPDGEIGMLKIFQNDGQKEILEHPLCEAFLYVKWEKMKKFYLFRLVLSSIFVLVLSVY 520
           Q+    EI  L  F ++GQKEILEHPLC +FLY+KW K++K+Y+ RL+    FVL L++Y
Sbjct: 507 QHCHPREISYLNTFVDEGQKEILEHPLCSSFLYIKWGKIRKYYIGRLIFCFSFVLFLTLY 566

Query: 521 VLTTLAQDCYNASK--NITLFTPTFCTKNSEIGHFLLRNPDFMETVWYVLALLATIELIR 578
           VLT LA +CYN SK  N T+     C K S +G  L  NP  ME  W+VL  +  +E+ R
Sbjct: 567 VLTALAHNCYNGSKDDNTTIQAQELCQKQSILGDMLRNNPFVMEMQWWVLVAITIVEIFR 626

Query: 579 KIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNL 638
           K++G+  Y+SFR Y + V N+ EW++I SVF+IS +YT +TY +QNH+GA AVLLGW+NL
Sbjct: 627 KVYGITGYSSFRHYVTQVENIMEWFVITSVFVISYIYTNKTYTFQNHIGAFAVLLGWTNL 686

Query: 639 MGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFI 698
           M MIGQLP    YVAM+++VQ EF KLF AY C+L+GFT++FC++FPS   F NP +GFI
Sbjct: 687 MLMIGQLPVFDVYVAMYTKVQGEFAKLFMAYSCMLIGFTISFCVIFPSSSSFANPFMGFI 746

Query: 699 NILVMMTGELNVNEVLLGTEAK-PPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQ 757
           ++LVMM GE +++ ++   + K PP LL+ +A I F +F+LFVT++LMNLLVGIAV DIQ
Sbjct: 747 SVLVMMIGEQDLSLLINDPDGKDPPFLLEVSAQITFVLFLLFVTIILMNLLVGIAVHDIQ 806

Query: 758 GLHKTAGLDKLVRQTELIHSLELALFQGYLPNRIVSMLKSQALLTPSSYTVALNVKPLNP 817
           GL KTAGL KLVRQT+LI  +E ALF GYLP  + ++L   AL++P +Y V L VKPLNP
Sbjct: 807 GLKKTAGLSKLVRQTKLISYIESALFNGYLPTWLRNLLHYTALVSPQAYRVVLCVKPLNP 866

Query: 818 RETRLPKEVMLNALDIARQRRIDPHFI 844
            E RLP+++++ A ++ + R+   H I
Sbjct: 867 SEKRLPRDILMKAYEVGKMRKQFGHTI 893

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|390179385|ref|XP_003736886.1| GA16147, isoform B [Drosophila pseudoobscura pseudoobscura] gi|388859833|gb|EIM52959.1| GA16147, isoform B [Drosophila pseudoobscura pseudoobscura]

 Score =  750 bits (1937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/807 (46%), Positives = 548/807 (67%), Gaps = 24/807 (2%)

Query: 59  DSLEETISDELSYKVCKESIRASLLEAMKMSSGDVNVLYAIENSLYEPDEMATLFSKASQ 118
           DS EE  S ELS ++C +++R SL++ MK ++G V +   IE      +   T F  AS+
Sbjct: 42  DSFEEPTS-ELSVQICNDTLRISLIDQMKSATGRVRLFEDIEQGNVVAESTKTHFESASK 100

Query: 119 AEKTTALLWCVFVKREDLLDALHQLGADL---SNDKYGALHLAAFNGSIKGCSWLMLHGH 175
            EK    LW  F+KR DL++ L ++GADL     +   ++HLAAF+G +     L+  G 
Sbjct: 101 LEKNLCYLWAAFLKRWDLIEGLMEVGADLHFCDQNGISSMHLAAFSGCLATLGLLVSKGM 160

Query: 176 DINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHI---------HETIVHSAVSTNAVDCV 226
           ++N     YTPLH A  GN  + AKFLI N A I          E+++H AV +NA++C+
Sbjct: 161 NVNLQSKCYTPLHCAAFGNAAEAAKFLINNGADITKDTNKPNCEESLLHCAVRSNALECL 220

Query: 227 QLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKT--KERRVTALHL 284
           Q+ +S   + N L   G + +H+AAD G + CL+A+L++  AD +++   +E+  TALHL
Sbjct: 221 QIFISEGADVNSLKPNGTNAIHLAADLGNMQCLEALLNAPNADANVRICIREKESTALHL 280

Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKG-SQVNASDCD 343
           AA+ G VEC+ +LL   A+   +NH+   PLHLAA+  S+EC+E LLR G +  NA D D
Sbjct: 281 AADEGNVECVDLLLAKGADAKLKNHRGFTPLHLAARTSSLECVESLLRNGNADANAEDFD 340

Query: 344 NRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGA 403
           +RTPLHA++ K+  +   +E L++WGANVN +DI+G++ +H+AAL  L QCV+ LI HGA
Sbjct: 341 HRTPLHAAVGKSENAYDIMETLIQWGANVNHKDIYGFTALHLAALDGLVQCVEMLIFHGA 400

Query: 404 DISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISL---QDPEASTKDIELKLNFKYIL 460
           D+++K+  G+SAL++I R TPSS++ +R+KLD++I+L   QDP    +++EL+L+F+ +L
Sbjct: 401 DVTTKSKKGTSALNVITRKTPSSVAMIRQKLDAAITLHHSQDP--VNREVELELDFRQLL 458

Query: 461 QNGPDGEIGMLKIFQNDGQKEILEHPLCEAFLYVKWEKMKKFYLFRLVLSSIFVLVLSVY 520
           Q+    EI  L  F ++GQKEILEHPLC +FLY+KW K++K+Y+ RL+    FVL L++Y
Sbjct: 459 QHCHPREISYLNTFVDEGQKEILEHPLCSSFLYIKWGKIRKYYIGRLIFCFSFVLFLTLY 518

Query: 521 VLTTLAQDCYNASK--NITLFTPTFCTKNSEIGHFLLRNPDFMETVWYVLALLATIELIR 578
           VLT LA +CYN SK  N T+     C K S +G  L  NP  ME  W+VL  +  +E+ R
Sbjct: 519 VLTALAHNCYNGSKDDNTTIQAQELCQKQSILGDMLRNNPFVMEMQWWVLVAITIVEIFR 578

Query: 579 KIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNL 638
           K++G+  Y+SFR Y + V N+ EW++I SVF+IS +YT +TY +QNH+GA AVLLGW+NL
Sbjct: 579 KVYGITGYSSFRHYVTQVENIMEWFVITSVFVISYIYTNKTYTFQNHIGAFAVLLGWTNL 638

Query: 639 MGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFI 698
           M MIGQLP    YVAM+++VQ EF KLF AY C+L+GFT++FC++FPS   F NP +GFI
Sbjct: 639 MLMIGQLPVFDVYVAMYTKVQGEFAKLFMAYSCMLIGFTISFCVIFPSSSSFANPFMGFI 698

Query: 699 NILVMMTGELNVNEVLLGTEAK-PPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQ 757
           ++LVMM GE +++ ++   + K PP LL+ +A I F +F+LFVT++LMNLLVGIAV DIQ
Sbjct: 699 SVLVMMIGEQDLSLLINDPDGKDPPFLLEVSAQITFVLFLLFVTIILMNLLVGIAVHDIQ 758

Query: 758 GLHKTAGLDKLVRQTELIHSLELALFQGYLPNRIVSMLKSQALLTPSSYTVALNVKPLNP 817
           GL KTAGL KLVRQT+LI  +E ALF GYLP  + ++L   AL++P +Y V L VKPLNP
Sbjct: 759 GLKKTAGLSKLVRQTKLISYIESALFNGYLPTWLRNLLHYTALVSPQAYRVVLCVKPLNP 818

Query: 818 RETRLPKEVMLNALDIARQRRIDPHFI 844
            E RLP+++++ A ++ + R+   H I
Sbjct: 819 SEKRLPRDILMKAYEVGKMRKQFGHTI 845

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170047632|ref|XP_001851318.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167869999|gb|EDS33382.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  750 bits (1936), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/811 (46%), Positives = 548/811 (67%), Gaps = 29/811 (3%)

Query: 47  DEKPTMVDNMRTDSLEETISDELSYKVCKESIRASLLEAMKMSSGDVNVLYAIENSLYEP 106
           +  P M +N    ++E        ++V  E+IR SL+E M++SSG + +L  IE      
Sbjct: 76  ESAPNMFENYEESAVE------FGFEVSAETIRTSLMEQMRISSGRLKLLDNIEQGNICA 129

Query: 107 DEMATLFSKASQAEKTTALLWCVFVKREDLLDALHQLGADL---SNDKYGALHLAAFNGS 163
             +  +F  +S+AEK  + L+  F+KR DLL+ L + GA+L    ++ + ALHL+AF+G 
Sbjct: 130 ANVREMFEGSSKAEKNISFLFAAFLKRWDLLEGLLECGAELIYFDSNGFSALHLSAFSGC 189

Query: 164 IKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKN---------KAHIHETIV 214
           +   S L+  G D+N    ++TPLH A  GN V+ A+FLI           K +  E+++
Sbjct: 190 LNCTSLLVSRGIDVNMQPRAFTPLHCAAFGNAVEIARFLINKDGKQCINTKKQNYEESLL 249

Query: 215 HSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKT 274
           H AV +NA+DCV+L +S  ++ N L   G++ +H+AAD G + CLK +LD   AD +I+ 
Sbjct: 250 HCAVRSNAIDCVKLFISEGMDVNSLKPSGMNSIHLAADLGYVECLKVLLDCPTADPNIRI 309

Query: 275 --KERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLR 332
             +E+  TALHLAA+ G VE + +LL   AN   +NH+   PLHLAA+  S EC+E+LLR
Sbjct: 310 GIREKESTALHLAADEGNVESVSLLLAKGANAKLKNHRGFTPLHLAARTSSFECVELLLR 369

Query: 333 KG-SQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSEL 391
            G +  NA D D RTPLHA++ K+  +   +E L+ WGA+VN +D+FG++P+H+AAL  L
Sbjct: 370 VGNADPNAEDFDQRTPLHAAIGKSESAFDIIETLICWGADVNKKDVFGFTPLHLAALDGL 429

Query: 392 SQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISL---QDPEASTK 448
           + CV+ LI H AD+++K+  G++AL++I R TPSS++ + +K D +++L   QDP  S K
Sbjct: 430 AHCVEILIYHDADVTTKSKKGTTALNVITRKTPSSLAMINRKFDDAMTLIHSQDP--SDK 487

Query: 449 DIELKLNFKYILQNGPDGEIGMLKIFQNDGQKEILEHPLCEAFLYVKWEKMKKFYLFRLV 508
           ++ L+L+F+ ILQ+G   E   L    ++GQKEIL+HPLC AFLY+KW K++K+Y+ RL+
Sbjct: 488 EVVLELDFRSILQHGYPRETSYLNTLVDEGQKEILQHPLCSAFLYIKWGKIRKYYIARLL 547

Query: 509 LSSIFVLVLSVYVLTTLAQDCYNASKNI--TLFTPTFCTKNSEIGHFLLRNPDFMETVWY 566
              IF+L L++YVLT LA +CYN SK++  T+     C K S +G+ L  NP  ME  W 
Sbjct: 548 FCFIFILFLTLYVLTALAHNCYNGSKDMEETIQEQELCQKQSILGNMLRNNPFVMEMQWM 607

Query: 567 VLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHV 626
           VL  +  +E+ RK++G+  Y+S R Y + + N+ EW++I+SVF+IS +YTKRTY WQNH+
Sbjct: 608 VLVAITFVEICRKLYGMTGYSSIRRYITQMENVTEWFIIVSVFVISYIYTKRTYTWQNHI 667

Query: 627 GAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPS 686
           GA AVLLGW++LM MIGQLP  G YVAM+++VQ+EF KLF AY C+LVGFT++FC++FPS
Sbjct: 668 GAFAVLLGWTHLMVMIGQLPVFGAYVAMYTKVQVEFAKLFIAYSCMLVGFTISFCVIFPS 727

Query: 687 EDRFQNPIIGFINILVMMTGELNVNEVLLGTEAK-PPVLLKGTAHIVFTIFMLFVTVVLM 745
              F+NP +GFI +LVMM GEL++  ++   + K PP +L+ +A I F +F+LFVTV+LM
Sbjct: 728 SSSFENPFMGFITVLVMMVGELDLELLINDPDGKDPPFMLELSAQITFVLFLLFVTVILM 787

Query: 746 NLLVGIAVQDIQGLHKTAGLDKLVRQTELIHSLELALFQGYLPNRIVSMLKSQALLTPSS 805
           NLLVGIAV DIQ L KTA L KLV QT+LI  +E ALF G+LPN + S+L   AL++P +
Sbjct: 788 NLLVGIAVDDIQALKKTATLSKLVGQTKLISYIESALFNGWLPNWLRSLLHYTALVSPQA 847

Query: 806 YTVALNVKPLNPRETRLPKEVMLNALDIARQ 836
           Y V L+VKPLNP E RLP+ +M+ A + A++
Sbjct: 848 YRVILSVKPLNPEEKRLPRAIMMAAYEAAKK 878

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195036800|ref|XP_001989856.1| GH18568 [Drosophila grimshawi] gi|193894052|gb|EDV92918.1| GH18568 [Drosophila grimshawi]

 Score =  750 bits (1936), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/807 (47%), Positives = 549/807 (68%), Gaps = 24/807 (2%)

Query: 59  DSLEETISDELSYKVCKESIRASLLEAMKMSSGDVNVLYAIENSLYEPDEMATLFSKASQ 118
           DS EE  S ELS ++C +++R SL++ +K ++G V +L  IE      + +   F  AS+
Sbjct: 90  DSFEEPTS-ELSVQICNDTLRISLIDQIKSAAGRVRLLEDIEQGNVVTESLGKHFETASK 148

Query: 119 AEKTTALLWCVFVKREDLLDALHQLGADL---SNDKYGALHLAAFNGSIKGCSWLMLHGH 175
            EK  + LW  F+KR DL++AL   GADL     +   ALHLAAF+G +     L+  G 
Sbjct: 149 LEKNLSYLWAAFLKRWDLIEALLAAGADLHFCDQNGISALHLAAFSGCLATLDLLVAKGM 208

Query: 176 DINFTKDSYTPLHFAVLGNYVDCAKFLIK---------NKAHIHETIVHSAVSTNAVDCV 226
           ++N     YTPLH A  GN  + AK LI          NK +  E+++H AV +NA++C+
Sbjct: 209 NVNLQPKCYTPLHCAAFGNAAEAAKLLINSGAQITKDTNKPNCEESLLHCAVRSNALECL 268

Query: 227 QLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKT--KERRVTALHL 284
           QL ++   + N L   G + +H+AAD G + CL+A+L++  AD +++   +E+  TALHL
Sbjct: 269 QLFITEGADVNSLKPNGTNAIHLAADLGHLQCLEALLNAPNADANVRICIREKESTALHL 328

Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKG-SQVNASDCD 343
           AA+ G VEC+ +LL   A+   +NH+   PLHLAA+  S+EC+E LLR G +  NA D D
Sbjct: 329 AADEGNVECVDLLLSKGADAKLKNHRGFTPLHLAARTSSLECVESLLRNGNADANAEDFD 388

Query: 344 NRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGA 403
           +RTPLHA++ K+  +   +E L++WGANVN +DI+G++ +H+AAL  L QCV+ LI HGA
Sbjct: 389 HRTPLHAAVGKSENAYDIMETLIQWGANVNHKDIYGFTALHLAALDGLVQCVEMLIFHGA 448

Query: 404 DISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISL---QDPEASTKDIELKLNFKYIL 460
           D+++K+  G+SAL++I R TP+S++ +R+KLD++I+L   QDP    +++EL+L+F+ +L
Sbjct: 449 DVTTKSKKGTSALNVITRKTPASVAMIRQKLDAAITLHHSQDP--VNREVELELDFRQLL 506

Query: 461 QNGPDGEIGMLKIFQNDGQKEILEHPLCEAFLYVKWEKMKKFYLFRLVLSSIFVLVLSVY 520
           Q+    EI  L  F ++GQKEILEHPLC +FLY+KW K++K+Y+ RL+    FVL L++Y
Sbjct: 507 QHCHPREISYLNTFVDEGQKEILEHPLCSSFLYIKWGKIRKYYIGRLIFCFSFVLFLTLY 566

Query: 521 VLTTLAQDCYNASK--NITLFTPTFCTKNSEIGHFLLRNPDFMETVWYVLALLATIELIR 578
           VLT LA +CYN SK  N T+     C K S +G  L  NP  ME  W+VL  +  +E+ R
Sbjct: 567 VLTALAHNCYNGSKDDNTTIQAQELCQKQSILGDMLRNNPFVMEMQWWVLVAITIVEIFR 626

Query: 579 KIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNL 638
           K++G+  Y+SFR Y + V N+ EW++I SVF+IS +YTK+TY +QNH+GA AVLLGW+NL
Sbjct: 627 KLYGITGYSSFRHYVTQVENIMEWFVITSVFVISYIYTKQTYTFQNHIGAFAVLLGWTNL 686

Query: 639 MGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFI 698
           M MIGQLP    YVAM++RVQ EF KLF AY C+L+GFT++FC++FPS   F NP +GFI
Sbjct: 687 MLMIGQLPVFDVYVAMYTRVQGEFAKLFMAYSCMLIGFTISFCVIFPSSSSFANPFMGFI 746

Query: 699 NILVMMTGELNVNEVLLGTEAK-PPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQ 757
           ++LVMM GE +++ ++   + K PP LL+ +A I F +F+LFVT++LMNLLVGIAV DIQ
Sbjct: 747 SVLVMMIGEQDLSLLINDPDGKDPPFLLEVSAQITFVLFLLFVTIILMNLLVGIAVHDIQ 806

Query: 758 GLHKTAGLDKLVRQTELIHSLELALFQGYLPNRIVSMLKSQALLTPSSYTVALNVKPLNP 817
           GL KTAGL KLVRQT+LI  +E ALF GYLP  + ++L   AL++P +Y V L VKPLNP
Sbjct: 807 GLKKTAGLSKLVRQTKLISYIESALFNGYLPTWLRNLLHYTALVSPQAYRVVLCVKPLNP 866

Query: 818 RETRLPKEVMLNALDIARQRRIDPHFI 844
            E RLP+++++ A ++ + R+   H I
Sbjct: 867 SEKRLPRDILMKAYEVGKMRKQFGHTI 893

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195392489|ref|XP_002054890.1| GJ22553 [Drosophila virilis] gi|194152976|gb|EDW68410.1| GJ22553 [Drosophila virilis]

 Score =  749 bits (1934), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/807 (47%), Positives = 546/807 (67%), Gaps = 24/807 (2%)

Query: 59  DSLEETISDELSYKVCKESIRASLLEAMKMSSGDVNVLYAIENSLYEPDEMATLFSKASQ 118
           DS EE  S ELS ++C +++R SL++ MK ++G V +L  IE      + +   F  AS+
Sbjct: 89  DSFEEPTS-ELSVQICNDTLRISLIDQMKSAAGRVRLLEDIEQGNVVAEGLGAHFETASK 147

Query: 119 AEKTTALLWCVFVKREDLLDALHQLGADL---SNDKYGALHLAAFNGSIKGCSWLMLHGH 175
            EK    LW  F+KR DLL+ L + GADL     +   ALHL AF+G +     L+  G 
Sbjct: 148 LEKNLCYLWAAFLKRWDLLEGLLKAGADLHFCDQNGISALHLGAFSGCLATLDLLVTKGI 207

Query: 176 DINFTKDSYTPLHFAVLGNYVDCAKFLI---------KNKAHIHETIVHSAVSTNAVDCV 226
           ++N     YTPLH A  GN  + AKFLI          NK +  E+++H AV +NA++C+
Sbjct: 208 NVNLQPKCYTPLHCAAFGNAAEAAKFLIHSGALITKDTNKPNCEESLLHCAVRSNALECL 267

Query: 227 QLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKT--KERRVTALHL 284
           QL +    + N L   G + +H+AAD G + CL+A+L++  AD +++   +E+  TALHL
Sbjct: 268 QLFIGEGADVNSLKPNGTNAIHLAADLGHLQCLEALLNAPNADANVRICIREKESTALHL 327

Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKG-SQVNASDCD 343
           AA+ G VEC+ +LL   A+   +NH+   PLHLAA+  S+EC+E LLR G +  NA D D
Sbjct: 328 AADEGNVECVDLLLSKGADAKLKNHRGFTPLHLAARTSSLECVESLLRNGNADANAEDFD 387

Query: 344 NRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGA 403
           +RTPLHA++ K+  +   +E L++WGANVN +DI+G++ +H+AAL  L QCV+ LI HGA
Sbjct: 388 HRTPLHAAVGKSENAYDIMETLIQWGANVNHKDIYGFTALHLAALDGLVQCVEMLIFHGA 447

Query: 404 DISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISL---QDPEASTKDIELKLNFKYIL 460
           D+++K+  G+SAL++I R TP+S++ +R+KLD++I+L   QDP    +++EL+L+F+ +L
Sbjct: 448 DVTTKSKKGTSALNVITRKTPASVAMIRQKLDAAITLHHSQDP--VNREVELELDFRQLL 505

Query: 461 QNGPDGEIGMLKIFQNDGQKEILEHPLCEAFLYVKWEKMKKFYLFRLVLSSIFVLVLSVY 520
           Q+    EI  L  F ++GQKEILEHPLC +FLY+KW K++K+Y+ RL+    FVL L++Y
Sbjct: 506 QHCHPREISYLNTFVDEGQKEILEHPLCSSFLYIKWGKIRKYYIGRLIFCFSFVLFLTLY 565

Query: 521 VLTTLAQDCYNASK--NITLFTPTFCTKNSEIGHFLLRNPDFMETVWYVLALLATIELIR 578
           VLT LA +CYN SK  N T+     C K S +G  L  NP  ME  W+VL  +  +E+ R
Sbjct: 566 VLTALAHNCYNGSKDDNTTIQAQELCQKQSILGDMLRNNPFVMEMQWWVLVAITIVEIFR 625

Query: 579 KIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNL 638
           K++G+  Y+SFR Y + V N+ EW++I SVF+IS +YTK+TY +QNH+GA AVLLGW+NL
Sbjct: 626 KLYGITGYSSFRHYVTQVENIMEWFVITSVFVISYIYTKQTYTFQNHIGAFAVLLGWTNL 685

Query: 639 MGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFI 698
           M MIGQLP    YVAM++RVQ EF KLF AY C+L+GFT++FC++FPS   F NP +GFI
Sbjct: 686 MLMIGQLPVFDVYVAMYTRVQGEFAKLFMAYSCMLIGFTISFCVIFPSSSSFANPFMGFI 745

Query: 699 NILVMMTGELNVNEVLLGTEAK-PPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQ 757
            +LVMM GE +++ ++   + K PP LL+ +A I F +F+LFVT++LMNLLVGIAV DIQ
Sbjct: 746 TVLVMMIGEQDLSLLINDPDGKDPPFLLEVSAQITFVLFLLFVTIILMNLLVGIAVHDIQ 805

Query: 758 GLHKTAGLDKLVRQTELIHSLELALFQGYLPNRIVSMLKSQALLTPSSYTVALNVKPLNP 817
           GL KTAGL KLVRQT+LI  +E ALF GYLP  + ++L   AL++P +Y V L VKPLNP
Sbjct: 806 GLKKTAGLSKLVRQTKLISYIESALFNGYLPTWLRNLLHYTALVSPQAYRVVLCVKPLNP 865

Query: 818 RETRLPKEVMLNALDIARQRRIDPHFI 844
            E RLP+++++ A ++ + R+   H I
Sbjct: 866 SEKRLPRDILMKAYEVGKMRKHFGHTI 892

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	854
FB|FBgn0260005	986	wtrw "water witch" [Drosophila	0.829	0.718	0.465	3.2e-175
FB|FBgn0035113	956	pyx "pyrexia" [Drosophila mela	0.450	0.402	0.413	2.1e-117
WB|WBGene00007801	1211	trpa-1 [Caenorhabditis elegans	0.357	0.251	0.255	1.1e-37
UNIPROTKB|I3LEM4	1089	I3LEM4 "Uncharacterized protei	0.251	0.197	0.288	4.1e-35
MGI|MGI:3522699	1125	Trpa1 "transient receptor pote	0.224	0.170	0.321	6.3e-35
RGD|1303284	1125	Trpa1 "transient receptor pote	0.252	0.192	0.303	1.6e-34
UNIPROTKB|F1RWI1	1121	TRPA1 "Uncharacterized protein	0.251	0.191	0.288	1e-33
UNIPROTKB|E1C7Y7	1074	TRPA1 "Uncharacterized protein	0.254	0.202	0.263	2.3e-33
UNIPROTKB|E1BZK9	1075	TRPA1 "Uncharacterized protein	0.254	0.201	0.263	2.4e-33
ZFIN|ZDB-GENE-050105-6	1126	trpa1a "transient receptor pot	0.783	0.594	0.235	1.7e-31

FB|FBgn0260005 wtrw "water witch" [Drosophila melanogaster (taxid:7227)]

 Score = 1702 (604.2 bits), Expect = 3.2e-175, P = 3.2e-175
 Identities = 339/729 (46%), Positives = 485/729 (66%)

Query:   134 EDLLDALHQLGADLSNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLG 193
             E LL+A   L     N    ALHL+AF+G +     L+  G ++N     YTPLH A  G
Sbjct:   167 ESLLEAGADLHFCDQNG-ISALHLSAFSGCLATLGLLVAKGLNVNLQSKCYTPLHCAAFG 225

Query:   194 NYVDCAKFLIKNKAHI---------HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGV 244
             N  + AK LI N A I          E+++H AV +NA++C+Q+ ++   + N L   G 
Sbjct:   226 NAAEAAKLLINNGADISKDTSKPNCEESLLHCAVRSNALECLQIFIAEGADVNSLKPNGT 285

Query:   245 SPLHIAADRGLISCLKAILDSGMADVDIKT--KERRVTALHLAAENGYVECLRILLENHA 302
             + +H+AAD G I CL+A+L++  AD +++   +E+  TALHLAA+ G VEC+ +LL   A
Sbjct:   286 NAIHLAADLGNIQCLEALLNAPNADANVRICIREKESTALHLAADEGNVECVDLLLAKGA 345

Query:   303 NCNERNHKEQIPLHLAAKCQSVECMEMLLRKGS-QVNASDCDNRTPLHASLSKNILSVHP 361
             +   +NH+   PLHLAA+  S++C+E LLR G+   NA D D+RTPLHA++ K+  +   
Sbjct:   346 DAKLKNHRGFTPLHLAARTSSLDCVESLLRNGNADANAEDFDHRTPLHAAVGKSENAYDI 405

Query:   362 LEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMR 421
             +E L++WGANVN +DI+G++ +H+AAL  L QCV+ LI HGAD+++K+  G+SAL++I R
Sbjct:   406 METLIQWGANVNHKDIYGFTALHLAALDGLVQCVEMLIFHGADVTTKSKKGTSALNVITR 465

Query:   422 NTPSSISSVRKKLDSSISL---QDPEASTKDIELKLNFKYILQNGPDGEIGMLKIFQNDG 478
              TP+S++ +R+KLD++I+L   QDP    +++EL+L+F+ +LQ+    EI  L  F ++G
Sbjct:   466 KTPASVAMIRQKLDAAITLHHSQDPV--NREVELELDFRQLLQHCHPREISYLNTFVDEG 523

Query:   479 QKEILEHPLCEAFLYVKWEKMKKFYLFRXXXXXXXXXXXXXXXXXXXAQDCYNASKNITL 538
             QKEILEHPLC +FLY+KW +++K+Y+ R                   A +CYN SKN   
Sbjct:   524 QKEILEHPLCSSFLYIKWGRIRKYYIGRLIFCFSFVLFLTLYVLTALAHNCYNGSKNDNT 583

Query:   539 FTPT--FCTKNSEIGHFLLRNPDFMETVWYVLALLATIELIRKIFGLVEYASFREYCSHV 596
               P    C K S +G  L  NP  ME  W+VL  +  +E+ RK++G+  Y+SFR Y + V
Sbjct:   584 TIPAQELCQKQSILGDMLRNNPFVMEMQWWVLVAITIVEIFRKLYGITGYSSFRHYVTQV 643

Query:   597 TNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFS 656
              N+ EW++I SVF+IS +YT +TY +QNH+GA AVLLGW+NLM MIGQLP    YVAM++
Sbjct:   644 ENIMEWFVITSVFVISYIYTNKTYTFQNHIGAFAVLLGWTNLMLMIGQLPVFDVYVAMYT 703

Query:   657 RVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFINILVMMTGELNVNEVLLG 716
             RVQ EF KLF AY C+L+GFT++FC++FPS   F NP +GFI +LVMM GE +++ ++  
Sbjct:   704 RVQGEFAKLFMAYSCMLIGFTISFCVIFPSSSSFANPFMGFITVLVMMIGEQDLSLLIND 763

Query:   717 TEAK-PPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKTAGLDKLVRQTELI 775
              E K PP LL+ +A I F +F+LFVT++LMNLLVGIAV DIQGL KTAGL KLVRQT+LI
Sbjct:   764 PEGKDPPFLLEVSAQITFVLFLLFVTIILMNLLVGIAVHDIQGLKKTAGLSKLVRQTKLI 823

Query:   776 HSLELALFQGYLPNRIVSMLKSQALLTPSSYTVALNVKPLNPRETRLPKEVMLNALDIAR 835
               +E ALF GYLP  + ++L   AL++P +Y V L VKPLNP E RLP+E+++ A ++ +
Sbjct:   824 SYIESALFNGYLPTWLRNLLHYTALVSPQAYRVVLCVKPLNPSEKRLPREILMKAYEVGK 883

Query:   836 QRRIDPHFI 844
              R+   H I
Sbjct:   884 MRKHFGHTI 892

GO:0006816 "calcium ion transport" evidence=ISS

GO:0005262 "calcium channel activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005216 "ion channel activity" evidence=IEA

GO:0009270 "response to humidity" evidence=IMP

GO:0007605 "sensory perception of sound" evidence=IMP

FB|FBgn0035113 pyx "pyrexia" [Drosophila melanogaster (taxid:7227)]

 Score = 680 (244.4 bits), Expect = 2.1e-117, Sum P(2) = 2.1e-117
 Identities = 165/399 (41%), Positives = 226/399 (56%)

Query:   119 AEKTTALLWC-VFVKREDLLDALHQLGADLS-NDKYGA--LHLAAFNGSIKGCSWLMLHG 174
             A+   AL+ C VF   E+ L  L    AD +  D  G   LH A    +      L+  G
Sbjct:    97 ADCNLALICCSVFGSVENTLFLLKHYNADPNVADSRGRTPLHFACCRANAPIAKVLLDFG 156

Query:   175 HDINF--TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIH-----ETIVHSAVSTNAVDCVQ 227
              D N    +   T LH A     V+C   L++ KA I+      + +H A+  NAVDCV+
Sbjct:   157 ADPNRWDARKEVTSLHCAASSKSVECILLLLRRKASINIGIEKRSALHYAIDVNAVDCVE 216

Query:   228 LLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAE 287
             +LL    +PN       +PLH A+  G   C++ +L S  ADV  +  E +VTALHLAAE
Sbjct:   217 ILLKYGADPNTPQVYTETPLHTASAAGFAKCVQLLL-SHNADVRSQFGEGKVTALHLAAE 275

Query:   288 NGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTP 347
             N YVEC R+LLE+ A  + RN   Q PLHLA   QS+  +++L+  G+ VNA   D RT 
Sbjct:   276 NDYVECARLLLEHRAEVDCRNASHQTPLHLACLSQSIGTVDLLISYGANVNAVYRDGRTA 335

Query:   348 LHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISS 407
             LHA++ K   S+     LLK GA+VN  D +GY+P+HIAAL+E S CV   I HGADI++
Sbjct:   336 LHAAIVKQSRSLDCCNALLKAGADVNKADNYGYTPLHIAALNEFSSCVYTFIEHGADITA 395

Query:   408 KTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQDPEASTKDIELKLNFKYILQNGP-D- 465
             +T    SALS I+R TP  I  + +KLDSSI   D E    D ++KL+F+ ++ +   D 
Sbjct:   396 RTDGRVSALSFIVRRTPEIIPKLMQKLDSSIKANDQEIGDVDCQIKLDFRLLVPSSSMDR 455

Query:   466 GEIGMLKIFQNDGQKEILEHPLCEAFLYVKWEKMKKFYL 504
             GE  +L      GQK IL HPLCE FL++KW +++KF+L
Sbjct:   456 GETELLLSLIEVGQKRILMHPLCETFLFLKWRRIRKFFL 494

GO:0005262 "calcium channel activity" evidence=ISS

GO:0006816 "calcium ion transport" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0006812 "cation transport" evidence=IDA

GO:0005261 "cation channel activity" evidence=IDA

GO:0016021 "integral to membrane" evidence=IC

GO:0051290 "protein heterotetramerization" evidence=NAS

GO:0009408 "response to heat" evidence=IMP

GO:0048060 "negative gravitaxis" evidence=IMP

WB|WBGene00007801 trpa-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 295 (108.9 bits), Expect = 1.1e-37, Sum P(2) = 1.1e-37
 Identities = 83/325 (25%), Positives = 145/325 (44%)

Query:   471 LKIFQNDGQKEILEHPLCEAFLYVKWEKM-KKFYLFRXXXXXXXXXXXXXXXXXXXAQDC 529
             LK+  +  +  +L HPL +A L  KW ++ +  Y F                    A   
Sbjct:   781 LKLMADAEKLHLLNHPLSKALLKYKWNRLGRPMYYFALFMYLVFIVSLTQYVRHTKAP-- 838

Query:   530 YNASKNITLFTPTFCTKNSEIGHFLLRNPDFMETVW-YVLALLATIELIRKIFGLVEYAS 588
             YN     + +   +  +N          PD    VW  ++  LA  +++ + F L +   
Sbjct:   839 YNVWNEESYYDSEYFDENETCPQINTTKPD---VVWKIIIQTLAVCQILVECFQLFQ-RK 894

Query:   589 FREYCSHVTNLFEWYM----IISVFLIS-CVYTKRT-YIWQNHVGAVAVLLGWSNLMGMI 642
             F  Y  +  N  + ++    +I+V+  S C  T      WQ  + A+ +  GW NL+ MI
Sbjct:   895 FA-YLVNWENWIDCFIYSTALITVYDFSECSATSGVRQNWQWILAALCIFFGWINLLFMI 953

Query:   643 GQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFINILV 702
              ++P  G +V MF  +   F + F  ++  ++ F+ +F ++  +   F    +  +   V
Sbjct:   954 RKMPRFGIFVVMFVDIVKTFFRFFPVFVLFIIAFSSSFYVILQNRPEFSTIFMSPLKTTV 1013

Query:   703 MMTGELNVNEVLLGTEAKPPVLLKGTAHI-----VFTIFMLFVTVVLMNLLVGIAVQDIQ 757
             MM GE     +  G E      + G AH      +F  F + +T++LMNLLVG+AV DI+
Sbjct:  1014 MMIGEFEFTGIFHGDETTHAEKMFGPAHTAVACALFFFFCIIMTILLMNLLVGLAVDDIK 1073

Query:   758 GLHKTAGLDKLVRQTELIHSLELAL 782
             G+ + A L +L  Q +L+  +E +L
Sbjct:  1074 GVQEKAELKRLAMQVDLVLQIEASL 1098

GO:0005216 "ion channel activity" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

UNIPROTKB|I3LEM4 I3LEM4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 252 (93.8 bits), Expect = 4.1e-35, Sum P(3) = 4.1e-35
 Identities = 65/225 (28%), Positives = 110/225 (48%)

Query:   566 YVLALLATIELIRKIFGLV-EYASF----REYCSHVTNLFEWYMII-SVFLISCVYTK-R 618
             Y + +   + L+  IFG   E A      R Y    +N  EW +   S+  +S ++    
Sbjct:   739 YTINVCMILVLLSSIFGYCKEVAQIFQQKRNYFFDNSNALEWIIYTTSIIFVSPLFISIP 798

Query:   619 TYI-WQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFT 677
              Y+ WQ   GA+A+ L W N +  + +  + G ++ M   +    LK    ++ LLV F 
Sbjct:   799 AYVQWQ--CGAIAIYLYWMNFLLYLQRFENCGIFIVMLEVIMKTLLKSTVVFVFLLVAFG 856

Query:   678 LTFCIVFPSEDRFQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFM 737
             L+F ++   +D F +P++  +    MM G++N ++  L    +  +     +  +   F 
Sbjct:   857 LSFYVLLSIQDAFSSPLLSIMQTFSMMLGDINYHDAFLDPFLRNELAYPFLSFALLITFT 916

Query:   738 LFVTVVLMNLLVGIAVQDIQGLHKTAGLDKLVRQTELIHSLELAL 782
             +FV +VLMNLL+G+AV DI  + K A L ++  Q EL  SLE  L
Sbjct:   917 MFVPIVLMNLLIGLAVGDIAEVQKHALLKRIAMQVELHTSLEKKL 961

GO:0016021 "integral to membrane" evidence=IEA

GO:0005216 "ion channel activity" evidence=IEA

MGI|MGI:3522699 Trpa1 "transient receptor potential cation channel, subfamily A, member 1" [Mus musculus (taxid:10090)]

 Score = 239 (89.2 bits), Expect = 6.3e-35, Sum P(2) = 6.3e-35
 Identities = 66/205 (32%), Positives = 98/205 (47%)

Query:   590 REYCSHVTNLFEW--YMIISVFLISCVYTKRTYI-WQNHVGAVAVLLGWSNLMGMIGQLP 646
             R Y     N  EW  Y    +F++        Y+ WQ   GA+A+   W N +  + +  
Sbjct:   800 RNYFLDYNNALEWVIYTTSIIFVLPLFLNIPAYMQWQ--CGAIAIFFYWMNFLLYLQRFE 857

Query:   647 SVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFINILVMMTG 706
             + G ++ M   +    L+    +I LL+ F L+F ++   +D F  P++  I    MM G
Sbjct:   858 NCGIFIVMLEVIFKTLLRSTGVFIFLLLAFGLSFYVLLNFQDAFSTPLLSLIQTFSMMLG 917

Query:   707 ELNVN----EVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKT 762
             ++N      E L   E   PVL  G   I FT   +FV +VLMNLL+G+AV DI  + K 
Sbjct:   918 DINYRDAFLEPLFRNELAYPVLTFGQL-IAFT---MFVPIVLMNLLIGLAVGDIAEVQKH 973

Query:   763 AGLDKLVRQTELIHSLELALFQGYL 787
             A L ++  Q EL  +LE  L   YL
Sbjct:   974 ASLKRIAMQVELHTNLEKKLPLWYL 998

GO:0005216 "ion channel activity" evidence=IDA;IMP

GO:0005262 "calcium channel activity" evidence=IMP;IDA

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IMP;IDA

GO:0009409 "response to cold" evidence=IMP;IDA

GO:0015267 "channel activity" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=ISS

GO:0032421 "stereocilium bundle" evidence=IDA

GO:0034220 "ion transmembrane transport" evidence=IDA;IMP

GO:0042493 "response to drug" evidence=IDA

GO:0042542 "response to hydrogen peroxide" evidence=IMP

GO:0048265 "response to pain" evidence=IDA;IMP

GO:0050896 "response to stimulus" evidence=IEA

GO:0050955 "thermoception" evidence=IDA

GO:0050966 "detection of mechanical stimulus involved in sensory perception of pain" evidence=IMP

GO:0050968 "detection of chemical stimulus involved in sensory perception of pain" evidence=IDA;IMP

GO:0055085 "transmembrane transport" evidence=IDA

GO:0070588 "calcium ion transmembrane transport" evidence=IMP;IDA

RGD|1303284 Trpa1 "transient receptor potential cation channel, subfamily A, member 1" [Rattus norvegicus (taxid:10116)]

 Score = 240 (89.5 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
 Identities = 71/234 (30%), Positives = 110/234 (47%)

Query:   566 YVLALLATIELIRKIFG----LVE-YASFREYCSHVTNLFEW--YMIISVFLISCVYTKR 618
             + L +   +  +  IFG    +V+ +   R Y     N  EW  Y    +F++       
Sbjct:   771 FPLKICMILVFLSSIFGYCKEVVQIFQQKRNYFLDYNNALEWVIYTTSMIFVLPLFLDIP 830

Query:   619 TYI-WQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFT 677
              Y+ WQ   GA+A+   W N +  + +  + G ++ M   +    L+    +I LL+ F 
Sbjct:   831 AYMQWQ--CGAIAIFFYWMNFLLYLQRFENCGIFIVMLEVIFKTLLRSTGVFIFLLLAFG 888

Query:   678 LTFCIVFPSEDRFQNPIIGFINILVMMTGELNVN----EVLLGTEAKPPVLLKGTAHIVF 733
             L+F ++   +D F  P++  I    MM G++N      E L   E   PVL  G   I F
Sbjct:   889 LSFYVLLNFQDAFSTPLLSLIQTFSMMLGDINYRDAFLEPLFRNELAYPVLTFGQL-IAF 947

Query:   734 TIFMLFVTVVLMNLLVGIAVQDIQGLHKTAGLDKLVRQTELIHSLELALFQGYL 787
             T   +FV +VLMNLL+G+AV DI  + K A L ++  Q EL  +LE  L   YL
Sbjct:   948 T---MFVPIVLMNLLIGLAVGDIAEVQKHASLKRIAMQVELHTNLEKKLPFWYL 998

GO:0005216 "ion channel activity" evidence=ISO

GO:0005262 "calcium channel activity" evidence=IEA;ISO

GO:0006811 "ion transport" evidence=IEA

GO:0006816 "calcium ion transport" evidence=ISO

GO:0009409 "response to cold" evidence=IEA;ISO

GO:0015267 "channel activity" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0032421 "stereocilium bundle" evidence=IEA;ISO

GO:0034220 "ion transmembrane transport" evidence=ISO

GO:0042493 "response to drug" evidence=IEA;ISO

GO:0042542 "response to hydrogen peroxide" evidence=IEA;ISO

GO:0048265 "response to pain" evidence=IEA;ISO

GO:0050896 "response to stimulus" evidence=IEA

GO:0050955 "thermoception" evidence=IEA;ISO

GO:0050966 "detection of mechanical stimulus involved in sensory perception of pain" evidence=IEA;ISO

GO:0050968 "detection of chemical stimulus involved in sensory perception of pain" evidence=IEA;ISO

GO:0055085 "transmembrane transport" evidence=ISO

GO:0070588 "calcium ion transmembrane transport" evidence=ISO

UNIPROTKB|F1RWI1 TRPA1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 252 (93.8 bits), Expect = 1.0e-33, Sum P(2) = 1.0e-33
 Identities = 65/225 (28%), Positives = 110/225 (48%)

Query:   566 YVLALLATIELIRKIFGLV-EYASF----REYCSHVTNLFEWYMII-SVFLISCVYTK-R 618
             Y + +   + L+  IFG   E A      R Y    +N  EW +   S+  +S ++    
Sbjct:   771 YTINVCMILVLLSSIFGYCKEVAQIFQQKRNYFFDNSNALEWIIYTTSIIFVSPLFISIP 830

Query:   619 TYI-WQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFT 677
              Y+ WQ   GA+A+ L W N +  + +  + G ++ M   +    LK    ++ LLV F 
Sbjct:   831 AYVQWQ--CGAIAIYLYWMNFLLYLQRFENCGIFIVMLEVIMKTLLKSTVVFVFLLVAFG 888

Query:   678 LTFCIVFPSEDRFQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFM 737
             L+F ++   +D F +P++  +    MM G++N ++  L    +  +     +  +   F 
Sbjct:   889 LSFYVLLSIQDAFSSPLLSIMQTFSMMLGDINYHDAFLDPFLRNELAYPFLSFALLITFT 948

Query:   738 LFVTVVLMNLLVGIAVQDIQGLHKTAGLDKLVRQTELIHSLELAL 782
             +FV +VLMNLL+G+AV DI  + K A L ++  Q EL  SLE  L
Sbjct:   949 MFVPIVLMNLLIGLAVGDIAEVQKHALLKRIAMQVELHTSLEKKL 993

GO:0016021 "integral to membrane" evidence=IEA

GO:0005216 "ion channel activity" evidence=IEA

UNIPROTKB|E1C7Y7 TRPA1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 252 (93.8 bits), Expect = 2.3e-33, Sum P(2) = 2.3e-33
 Identities = 60/228 (26%), Positives = 115/228 (50%)

Query:   560 FMETVWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMI-ISVFLISCVYTKR 618
             F      ++ +++ + + ++IF L++     +Y    +NL +W +   S+  +S ++   
Sbjct:   776 FTRVCMCLVLIMSLLGICKEIFQLIQQKL--KYLLDYSNLLDWTIYSTSIIFVSSLFINT 833

Query:   619 TYIWQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTL 678
                 Q   GA+AV L W N +  + +  + G YV MF  +    +++   +  L++ F L
Sbjct:   834 PAHLQWECGAIAVYLSWMNFLLYLQRFENYGIYVVMFWEILRTLIRIAVVFFFLILAFGL 893

Query:   679 TFCIVFPSEDRFQNPIIGFINILVMMTGELNVNEV----LLGTEAKPPVLLKGTAHIVFT 734
             +F ++  S+  +  P++  +    MM G++N ++     LL +E   P L    ++ V  
Sbjct:   894 SFFVLLGSQQTYSTPLLSVMKTFAMMLGDINYHDAFLDPLLSSELPYPFL----SYTVLI 949

Query:   735 IFMLFVTVVLMNLLVGIAVQDIQGLHKTAGLDKLVRQTELIHSLELAL 782
             IF L + ++LMNLL+G+AV DI  + K A L ++  Q  L  +LE  L
Sbjct:   950 IFTLLIPILLMNLLIGLAVGDIAEVQKYAALKRIAMQVNLHTNLEKKL 997

GO:0005216 "ion channel activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E1BZK9 TRPA1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 252 (93.8 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
 Identities = 60/228 (26%), Positives = 115/228 (50%)

Query:   560 FMETVWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMI-ISVFLISCVYTKR 618
             F      ++ +++ + + ++IF L++     +Y    +NL +W +   S+  +S ++   
Sbjct:   777 FTRVCMCLVLIMSLLGICKEIFQLIQQKL--KYLLDYSNLLDWTIYSTSIIFVSSLFINT 834

Query:   619 TYIWQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTL 678
                 Q   GA+AV L W N +  + +  + G YV MF  +    +++   +  L++ F L
Sbjct:   835 PAHLQWECGAIAVYLSWMNFLLYLQRFENYGIYVVMFWEILRTLIRIAVVFFFLILAFGL 894

Query:   679 TFCIVFPSEDRFQNPIIGFINILVMMTGELNVNEV----LLGTEAKPPVLLKGTAHIVFT 734
             +F ++  S+  +  P++  +    MM G++N ++     LL +E   P L    ++ V  
Sbjct:   895 SFFVLLGSQQTYSTPLLSVMKTFAMMLGDINYHDAFLDPLLSSELPYPFL----SYTVLI 950

Query:   735 IFMLFVTVVLMNLLVGIAVQDIQGLHKTAGLDKLVRQTELIHSLELAL 782
             IF L + ++LMNLL+G+AV DI  + K A L ++  Q  L  +LE  L
Sbjct:   951 IFTLLIPILLMNLLIGLAVGDIAEVQKYAALKRIAMQVNLHTNLEKKL 998

GO:0016021 "integral to membrane" evidence=IEA

GO:0005262 "calcium channel activity" evidence=IEA

GO:0009409 "response to cold" evidence=IEA

GO:0032421 "stereocilium bundle" evidence=IEA

GO:0042493 "response to drug" evidence=IEA

GO:0042542 "response to hydrogen peroxide" evidence=IEA

GO:0048265 "response to pain" evidence=IEA

GO:0050955 "thermoception" evidence=IEA

GO:0050966 "detection of mechanical stimulus involved in sensory perception of pain" evidence=IEA

GO:0050968 "detection of chemical stimulus involved in sensory perception of pain" evidence=IEA

ZFIN|ZDB-GENE-050105-6 trpa1a "transient receptor potential cation channel, subfamily A, member 1a" [Danio rerio (taxid:7955)]

 Score = 381 (139.2 bits), Expect = 1.7e-31, P = 1.7e-31
 Identities = 171/726 (23%), Positives = 310/726 (42%)

Query:    89 SSGDVNVLYAIENSLYEPDEMATLFSKASQAEKTTALLWCVFVKREDLLDALHQLGADLS 148
             S G   V+  + +S  +  ++  +   A+Q     A+++  F   E L+        D  
Sbjct:   290 SQGATEVVKIMLSSYPKVCDLINITDGANQTPLHKAVIFDHFELSEYLMS--QGANIDFV 347

Query:   149 NDK-YGALHLAAFNGSIKGCSWLMLHGHDINFT-KDSYTPLHFAVL---G--NYV----- 196
             + K +  L LA   G+ +  + L+ HG D+    K     LH A+L   G  N       
Sbjct:   348 DCKGHSPLLLATSCGAWRTVNLLLSHGADLTKKDKSGCNFLHLAILQPRGLKNLPTEVLQ 407

Query:   197 -DCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGL 255
              +  + L+ ++     T +H A      D V+ +L L+++ +  + +  S LH AA+ G 
Sbjct:   408 HESVRELLNDEDIEGCTPLHYACRLGIPDSVKNMLGLEVSLDQKSKEKKSALHFAAEFGR 467

Query:   256 ISCLKAILDSGMADVDIKTK--ERRVTALHLAAENGYVECLRILLENHANCNERNHKEQI 313
             I+    +L+  + D  +  +  E+ +T LHLA+  G+V+ + +LL   A  +  +++   
Sbjct:   468 INTCHRLLEM-VTDTRLLNEGDEKGLTPLHLASREGHVKVVELLLRKGALFHS-DYRGWS 525

Query:   314 PLHLAAKCQSVECMEMLLRKGSQV-NASDCDNRTPLHASLSKNILSVHPLEILLKWGANV 372
              LH AA     + M+ LL    ++ N +D D  T LH  L+     V  + +LL  GA +
Sbjct:   526 GLHHAASEGYTQTMDTLLTSNIKLLNKTDGDGNTALH--LAARAGHVAAVRLLLYRGAKI 583

Query:   373 --NARDI-FGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISS 429
               N  D  F +  +H A     +  ++      A  + K P+ S+   I+M        S
Sbjct:   584 ILNKNDASFLHEAVHNARREVTNMVIESDRCEEAMTTYK-PN-STKRCIVMDMIEFLPES 641

Query:   430 VRKKLDSSISLQDPEASTKDIELKLNFKYI---LQN----GPDGE-----IGMLKIFQND 477
              +  LD+ I   + + +  +  ++ NF+++   LQN    G + +     +  L    N 
Sbjct:   642 FKHLLDTCIRESEEDVNCTNYYIEYNFRWLQHPLQNLKKTGMEKDMAYKPLSALNAMVNF 701

Query:   478 GQKEILEHPLCEAFLYVKWEKMK-KFYLFRXXXXXXXXXXXXXXXXXXXAQDCYNASKNI 536
              +  +L HP+C+ +L +KW     K +L                      +     S+N+
Sbjct:   702 NRVNLLTHPVCKKYLEMKWSAYGIKAHLLNMTVYALGVFPLTYLIVNL--KPTLVTSRNV 759

Query:   537 TLFTPTFCTKNSEIGHFLLRNPDFMETVWYVLALLATIELIRKIFGLVEYASFREYCSHV 596
             T      CT         L    ++ T   +L L   +  + K   L  +     Y   +
Sbjct:   760 TSVNMV-CTS--------LYKQSYLTTSSMLLVLAMNMYAVGKEI-LQMFQQRLNYLRDL 809

Query:   597 TNLFEWYMIIS--VFLISCVYT-KRTYIWQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVA 653
             +N  +W   I   +F++  +   K ++ WQ   GA+A L  W NL+  + +   +G YV 
Sbjct:   810 SNYMDWAAAICALLFVVPLLMNLKSSWHWQ--AGALAALTSWLNLLLYLQRFERIGIYVV 867

Query:   654 MFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFINILVMMTGELNVNEV 713
             MF  +    L +   +  L++GF L+F  +   +  F    +  +   VMM GE+N  + 
Sbjct:   868 MFREISRTLLSIIVLFFYLILGFALSFYALMIEQQHFGRMFLSLLQTFVMMVGEMNYQDN 927

Query:   714 LLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKTAGLDKLVRQTE 773
              +    +  +        +F  F+L V ++LMNLL+G+AV DI  +   A L ++  Q E
Sbjct:   928 FMKPYLQGDLPFPDLTLAIFVWFVLLVPILLMNLLIGLAVGDIAEVQTNACLKRIAMQIE 987

Query:   774 LIHSLE 779
             L  +LE
Sbjct:   988 LHTNLE 993

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005216 "ion channel activity" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0070542 "response to fatty acid" evidence=IDA

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0006810 "transport" evidence=IEA

GO:0050974 "detection of mechanical stimulus involved in sensory perception" evidence=IMP

GO:0015276 "ligand-gated ion channel activity" evidence=IDA

GO:0009593 "detection of chemical stimulus" evidence=IDA

GO:0050960 "detection of temperature stimulus involved in thermoception" evidence=IMP

GO:0008381 "mechanically-gated ion channel activity" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	854
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-31
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	6e-29
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	7e-27
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	4e-23
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	4e-21
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	8e-21
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	6e-20
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	2e-16
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	2e-16
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	3e-16
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	5e-16
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	9e-16
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	2e-15
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	7e-15
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	9e-15
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-14
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-14
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	2e-14
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	2e-14
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	2e-14
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	3e-12
pfam00520	194	pfam00520, Ion_trans, Ion transport protein	4e-12
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	2e-11
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	1e-10
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	2e-09
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	4e-09
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	9e-09
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	4e-08
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	2e-07
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	1e-06
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	2e-06
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	2e-06
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	2e-06
pfam00023	33	pfam00023, Ank, Ankyrin repeat	2e-06
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	3e-06
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-05
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	1e-05
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	2e-05
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	2e-05
PHA02716	764	PHA02716, PHA02716, CPXV016; CPX019; EVM010; Provi	2e-05
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	3e-05
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	4e-05
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	2e-04
pfam00023	33	pfam00023, Ank, Ankyrin repeat	3e-04
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	3e-04
PHA02946	446	PHA02946, PHA02946, ankyin-like protein; Provision	3e-04
PHA02989	494	PHA02989, PHA02989, ankyrin repeat protein; Provis	3e-04
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	4e-04
PHA02884	300	PHA02884, PHA02884, ankyrin repeat protein; Provis	4e-04
smart00248	30	smart00248, ANK, ankyrin repeats	7e-04
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	8e-04
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	8e-04
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	0.001
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	0.001
PHA02946	446	PHA02946, PHA02946, ankyin-like protein; Provision	0.001
PHA02859	209	PHA02859, PHA02859, ankyrin repeat protein; Provis	0.001
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	0.002
pfam00023	33	pfam00023, Ank, Ankyrin repeat	0.002
pfam00023	33	pfam00023, Ank, Ankyrin repeat	0.002
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	0.002
pfam00023	33	pfam00023, Ank, Ankyrin repeat	0.004

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  118 bits (298), Expect = 2e-31
 Identities = 55/120 (45%), Positives = 81/120 (67%), Gaps = 2/120 (1%)

Query: 280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNA 339
           T LHLAA NG++E +++LLEN A+ N +++  + PLHLAAK   +E +++LL KG+ VNA
Sbjct: 9   TPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNA 68

Query: 340 SDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLI 399
            D D  TPLH +     L V  +++LLK GA+VNARD  G +P+H+AA +   + V  L+
Sbjct: 69  RDKDGNTPLHLAARNGNLDV--VKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  111 bits (280), Expect = 6e-29
 Identities = 54/130 (41%), Positives = 85/130 (65%), Gaps = 4/130 (3%)

Query: 237 NVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRI 296
           N  +  G +PLH+AA  G +  +K +L++G ADV+ K  + R T LHLAA+NG++E +++
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENG-ADVNAKDNDGR-TPLHLAAKNGHLEIVKL 58

Query: 297 LLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNI 356
           LLE  A+ N R+     PLHLAA+  +++ +++LL+ G+ VNA D D RTPLH +     
Sbjct: 59  LLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGH 118

Query: 357 LSVHPLEILL 366
           L V  +++LL
Sbjct: 119 LEV--VKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  105 bits (265), Expect = 7e-27
 Identities = 44/124 (35%), Positives = 72/124 (58%), Gaps = 8/124 (6%)

Query: 181 KDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE------TIVHSAVSTNAVDCVQLLLSLQI 234
           +D  TPLH A    +++  K L++N A ++       T +H A     ++ V+LLL    
Sbjct: 5   EDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGA 64

Query: 235 NPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECL 294
           + N  +  G +PLH+AA  G +  +K +L  G ADV+ + K+ R T LHLAA+NG++E +
Sbjct: 65  DVNARDKDGNTPLHLAARNGNLDVVKLLLKHG-ADVNARDKDGR-TPLHLAAKNGHLEVV 122

Query: 295 RILL 298
           ++LL
Sbjct: 123 KLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 95.1 bits (237), Expect = 4e-23
 Identities = 46/118 (38%), Positives = 72/118 (61%), Gaps = 2/118 (1%)

Query: 305 NERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEI 364
           N R+   + PLHLAA    +E +++LL  G+ VNA D D RTPLH +     L +  +++
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEI--VKL 58

Query: 365 LLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRN 422
           LL+ GA+VNARD  G +P+H+AA +     V  L+ HGAD++++   G + L +  +N
Sbjct: 59  LLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKN 116

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 96.7 bits (241), Expect = 4e-21
 Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 36/241 (14%)

Query: 181 KDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHS-----------AVSTNAVDCVQLL 229
           K    PL+ A     +D  K L+ N A I+ +  ++              T+  + V+LL
Sbjct: 33  KKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLL 92

Query: 230 LSLQINPNVLNNKGVSPLHIAADR--GLISCLKAILDSGMADVDIKTKERRVTALHLAAE 287
           L    N N  +N G++PL  A  +     S ++ +LD+G A+V+IK        LHL  E
Sbjct: 93  LEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNG-ANVNIKNS-DGENLLHLYLE 150

Query: 288 NGYV--ECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNR 345
           +  +  + L++L++   + N +N               V     LL  G  +N  D    
Sbjct: 151 SNKIDLKILKLLIDKGVDINAKN--------------RVNY---LLSYGVPINIKDVYGF 193

Query: 346 TPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADI 405
           TPLH ++  N      ++ LL  GAN N  + +G +P+HIA L+   +    L+ +G  I
Sbjct: 194 TPLHYAVYNNNPEF--VKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSI 251

Query: 406 S 406
            
Sbjct: 252 K 252

Length = 422

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 87.3 bits (217), Expect = 8e-21
 Identities = 37/95 (38%), Positives = 61/95 (64%), Gaps = 4/95 (4%)

Query: 247 LHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNE 306
           LH+AA  G +  +K +L+ G ADV++   +   TALHLAA NG +E +++LLE+ A+ N 
Sbjct: 1   LHLAAKNGNLELVKLLLEKG-ADVNLGDTD---TALHLAARNGNLEIVKLLLEHGADVNA 56

Query: 307 RNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASD 341
           ++      LHLAA+  ++E +++LL  G+ +N  D
Sbjct: 57  KDKDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 84.6 bits (210), Expect = 6e-20
 Identities = 37/95 (38%), Positives = 60/95 (63%), Gaps = 4/95 (4%)

Query: 282 LHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASD 341
           LHLAA+NG +E +++LLE  A+ N  +      LHLAA+  ++E +++LL  G+ VNA D
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGD--TDTALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 342 CDNRTPLHASLSKNILSVHPLEILLKWGANVNARD 376
            D  T LH +     L +  +++LL+ GA++N +D
Sbjct: 59  KDGNTALHLAARNGNLEI--VKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 83.6 bits (206), Expect = 2e-16
 Identities = 96/357 (26%), Positives = 163/357 (45%), Gaps = 63/357 (17%)

Query: 131 VKREDLLDA--LHQLGADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHGHDIN-FTKDSY 184
           +++++LL A  L + GAD+ + D Y    +H AA  G+ K  + L+ +G D+N    D  
Sbjct: 153 IQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDL 212

Query: 185 TPLHFAVLGNYVDCAKFLIKNKAHIHETIVH--SAVSTNAVDCVQLLLSLQINPNVLNNK 242
           + L  AV    +D  K +I N+++I++  +    A+    ++   LL     + N +++ 
Sbjct: 213 SVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDC 272

Query: 243 GVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHA 302
             +PLH A+    +S L                                  +  LLE  A
Sbjct: 273 KNTPLHHASQAPSLSRL----------------------------------VPKLLERGA 298

Query: 303 NCNERNHKEQIPLHLAAK-CQSVECMEMLLRKGSQVNASDCDNRTPLH--ASLSKNILSV 359
           + N +N K + PL+L AK     E +  L+  G+ VNA+D    TPLH  ++L +N   V
Sbjct: 299 DVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIV 358

Query: 360 HPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSII 419
                LL+ GANVNARD    +PIH AA+      ++ L+ +GADI + +    +AL   
Sbjct: 359 ---ITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFA 415

Query: 420 MRNTPSSISSVRKKLDSSISLQDPEASTKDIELKLNF-----------KYILQNGPD 465
           +  T +   SV+  +D   ++    +  KD+   L++           + +L NG D
Sbjct: 416 LCGT-NPYMSVKTLIDRGANVN---SKNKDLSTPLHYACKKNCKLDVIEMLLDNGAD 468

Length = 682

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 82.3 bits (203), Expect = 2e-16
 Identities = 86/331 (25%), Positives = 139/331 (41%), Gaps = 62/331 (18%)

Query: 174 GHDINFTKD-SYTPLHFAVLGNYVDCAKFLIKNKA---HIHETIVH---SAVSTNAVDCV 226
           G+ IN + D + TPL  A+        +  IK+ A   HI+  I H   +A+   A D +
Sbjct: 25  GNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDII 84

Query: 227 QLLLSLQINPNVLNNKGVSPLHIAADRGLISCL-----KAILDSGMADVDIKTKERRVTA 281
           +LL+   ++ ++L                I C+     K ILD G+ DV+IK  E + T 
Sbjct: 85  KLLIDNGVDTSILP---------------IPCIEKDMIKTILDCGI-DVNIKDAELK-TF 127

Query: 282 LHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASD 341
           LH A + G +E +++L E  A+ N  +     P+H+A K    + +++LL KG+  N  D
Sbjct: 128 LHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKD 187

Query: 342 CDNRTPLHASL--------------SKNIL-----SVHPLEI----------LLKWGANV 372
            +  +PLH +                 +I+        PL            LL   A++
Sbjct: 188 NNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAIELLINNASI 247

Query: 373 NARDIFGYSPIHIAALSELSQ-CVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVR 431
           N +DI G +P+H A         +D L+ H ADIS K   G + +    +        V 
Sbjct: 248 NDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDNKGENPIDTAFKYINK--DPVI 305

Query: 432 KKLDSSISLQDPEASTKDIELKLNFKYILQN 462
           K + ++  L       KD +  L    I  N
Sbjct: 306 KDIIANAVLIKEADKLKDSDF-LEHIEIKDN 335

Length = 434

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 75.5 bits (186), Expect = 3e-16
 Identities = 41/145 (28%), Positives = 61/145 (42%), Gaps = 31/145 (21%)

Query: 123 TALLWCVFVKREDLLDALHQLGADLSN-DKYG--ALHLAAFNGSIKGCSWLMLHGHDIN- 178
           T L         +++  L + GAD++  D  G   LHLAA NG ++    L+  G D+N 
Sbjct: 9   TPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNA 68

Query: 179 FTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNV 238
             KD  TPLH A     +D  K L+K+ A                           + N 
Sbjct: 69  RDKDGNTPLHLAARNGNLDVVKLLLKHGA---------------------------DVNA 101

Query: 239 LNNKGVSPLHIAADRGLISCLKAIL 263
            +  G +PLH+AA  G +  +K +L
Sbjct: 102 RDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 81.5 bits (201), Expect = 5e-16
 Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 8/191 (4%)

Query: 268 ADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECM 327
           AD+++K + +  TALH A EN       +LL   AN N  +     PLH A K  +   +
Sbjct: 158 ADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIV 217

Query: 328 EMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARD-IFGYSPIHIA 386
            +LL  G+  +A D    TPLH S+         L++LL+ G +VNA+  I G + +H +
Sbjct: 218 HILLENGASTDARDKCGNTPLHISVGY-CKDYDILKLLLEHGVDVNAKSYILGLTALHSS 276

Query: 387 ALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQDPEAS 446
             SE  + +  L+ +GADI+S      + LS  ++     I ++ + L S+I L   +  
Sbjct: 277 IKSE--RKLKLLLEYGADINSLNSYKLTPLSSAVK-QYLCI-NIGRILISNICLL--KRI 330

Query: 447 TKDIELKLNFK 457
             DI+    F 
Sbjct: 331 KPDIKNSEGFI 341

Length = 477

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 73.1 bits (180), Expect = 9e-16
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 7/92 (7%)

Query: 155 LHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHI----- 209
           LHLAA NG+++    L+  G D+N   D+ T LH A     ++  K L+++ A +     
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNL-GDTDTALHLAARNGNLEIVKLLLEHGADVNAKDK 59

Query: 210 -HETIVHSAVSTNAVDCVQLLLSLQINPNVLN 240
              T +H A     ++ V+LLL    + N+ +
Sbjct: 60  DGNTALHLAARNGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 79.3 bits (195), Expect = 2e-15
 Identities = 58/234 (24%), Positives = 107/234 (45%), Gaps = 10/234 (4%)

Query: 210 HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMAD 269
            +  +  A+    +D  + LL + INPN     G+SP+ +A        +K ++  G A 
Sbjct: 2   DQVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHG-AI 60

Query: 270 VDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKE-QIPLHLAAKCQSVECME 328
            D+K  +   + LH A E G V+ +  LL+     ++  +K+   PLHLA   + ++ M+
Sbjct: 61  PDVKYPDIE-SELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMK 119

Query: 329 MLLRKGSQVNASDCDNRTPLH-ASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAA 387
           +L+ +G+  +  + D  +PLH A +  +I     +E+L+   A ++  D  G +P+ IA 
Sbjct: 120 LLIARGADPDIPNTDKFSPLHLAVMMGDI---KGIELLIDHKACLDIEDCCGCTPLIIAM 176

Query: 388 LSELSQCVDCLIMHGADIS--SKTPSGSSALSIIMRNTPSSISSVRKK-LDSSI 438
                     L+  GA+I    K    ++    I  N    +    K+  D +I
Sbjct: 177 AKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNI 230

Length = 413

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 77.4 bits (191), Expect = 7e-15
 Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 25/210 (11%)

Query: 236 PNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYV---- 291
            +    K V PL++A +   I  +K +LD+G AD++  TK    T LH  +   Y     
Sbjct: 28  NDYSYKKPVLPLYLAKEARNIDVVKILLDNG-ADINSSTKNNS-TPLHYLSNIKYNLTDV 85

Query: 292 -ECLRILLENHANCNERNHKEQIPLHLAA--KCQSVECMEMLLRKGSQVNASDCDNRTPL 348
            E +++LLE  AN N  ++    PL  A   K  S   +E LL  G+ VN  + D    L
Sbjct: 86  KEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLL 145

Query: 349 HASLSKNILSVHPLEILLKWGANVNA----------------RDIFGYSPIHIAALSELS 392
           H  L  N + +  L++L+  G ++NA                +D++G++P+H A  +   
Sbjct: 146 HLYLESNKIDLKILKLLIDKGVDINAKNRVNYLLSYGVPINIKDVYGFTPLHYAVYNNNP 205

Query: 393 QCVDCLIMHGADISSKTPSGSSALSIIMRN 422
           + V  L+  GA+ +     G + L I + N
Sbjct: 206 EFVKYLLDLGANPNLVNKYGDTPLHIAILN 235

Length = 422

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 77.4 bits (191), Expect = 9e-15
 Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 57/271 (21%)

Query: 170 LMLHGHDINFTKDSY--TPLHFAVLGNYV-DCAKFLIKNKAHIHE------TIVH---SA 217
           L+  G D+N   +    TPLH  +      D  K LIK  A ++       T +H   S 
Sbjct: 69  LLEAGADVN-APERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSG 127

Query: 218 VSTNAVDCVQLLLSLQINPNVLNNKGVSPLHI-----AADRGLISCLKAILDSGMADVDI 272
            + N    ++LLL    + N L+  G++PL +      A+   +  L+ ++D   A  D+
Sbjct: 128 FNINP-KVIRLLLRKGADVNALDLYGMTPLAVLLKSRNAN---VELLRLLID---AGADV 180

Query: 273 KTKE-RRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLL 331
              + R  + LH   ++                  R                   +  L+
Sbjct: 181 YAVDDRFRSLLHHHLQS---------------FKPRA----------------RIVRELI 209

Query: 332 RKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSEL 391
           R G    A+D    TPLH+  + +      +  LL  G ++NAR+ +G +P+H AA+   
Sbjct: 210 RAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNN 269

Query: 392 SQCVDCLIMHGADISSKTPSGSSALSIIMRN 422
            +    LI  GADI++ +  G++ LS+++RN
Sbjct: 270 PRACRRLIALGADINAVSSDGNTPLSLMVRN 300

Length = 471

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 69.6 bits (171), Expect = 1e-14
 Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 5/91 (5%)

Query: 187 LHFAVLGNYVDCAKFLIKNKAHIHE----TIVHSAVSTNAVDCVQLLLSLQINPNVLNNK 242
           LH A     ++  K L++  A ++     T +H A     ++ V+LLL    + N  +  
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTDTALHLAARNGNLEIVKLLLEHGADVNAKDKD 60

Query: 243 GVSPLHIAADRGLISCLKAILDSGMADVDIK 273
           G + LH+AA  G +  +K +L+ G AD+++K
Sbjct: 61  GNTALHLAARNGNLEIVKLLLEHG-ADINLK 90

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 69.2 bits (170), Expect = 2e-14
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 2/90 (2%)

Query: 125 LLWCVFVKREDLLDALHQLGADLS-NDKYGALHLAAFNGSIKGCSWLMLHGHDINFT-KD 182
           L         +L+  L + GAD++  D   ALHLAA NG+++    L+ HG D+N   KD
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTDTALHLAARNGNLEIVKLLLEHGADVNAKDKD 60

Query: 183 SYTPLHFAVLGNYVDCAKFLIKNKAHIHET 212
             T LH A     ++  K L+++ A I+  
Sbjct: 61  GNTALHLAARNGNLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 76.5 bits (188), Expect = 2e-14
 Identities = 62/240 (25%), Positives = 103/240 (42%), Gaps = 34/240 (14%)

Query: 215 HSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAIL------DSGMA 268
           H AV    +D V+ LL+   N N  +++ ++PLHI         +K ++           
Sbjct: 42  HQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYT 101

Query: 269 DVDIKT--KERRVTALHLAAENGY---------------------VECLRILLENHANCN 305
            V IK     R V    +   N Y                      E  ++LL   A+ N
Sbjct: 102 LVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADIN 161

Query: 306 ERN-HKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEI 364
            ++ HK    LH A + +     E+LL  G+ VN  D  N +PLH ++      +  + I
Sbjct: 162 MKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPI--VHI 219

Query: 365 LLKWGANVNARDIFGYSPIHIAALSELS-QCVDCLIMHGADISSK-TPSGSSALSIIMRN 422
           LL+ GA+ +ARD  G +P+HI+         +  L+ HG D+++K    G +AL   +++
Sbjct: 220 LLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSSIKS 279

Length = 477

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 75.8 bits (187), Expect = 2e-14
 Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 10/230 (4%)

Query: 219 STNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLK---AILDSGMADVDIKTK 275
           S   V+ V+ LL+   + N     G +PLH+               +L++G ADV+   +
Sbjct: 23  SNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAG-ADVNAPER 81

Query: 276 ERRVTALHLAAENGYVE-CLRILLENHANCNERNHKEQIPLH--LAAKCQSVECMEMLLR 332
               T LHL   N      +++L++  A+ N ++   + PLH  L+    + + + +LLR
Sbjct: 82  CG-FTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLR 140

Query: 333 KGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALS--E 390
           KG+ VNA D    TPL   L     +V  L +L+  GA+V A D    S +H    S   
Sbjct: 141 KGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKP 200

Query: 391 LSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISL 440
            ++ V  LI  G D ++    G++ L  +   +    S V   L + IS+
Sbjct: 201 RARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISI 250

Length = 471

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 73.3 bits (179), Expect = 2e-14
 Identities = 59/181 (32%), Positives = 82/181 (45%), Gaps = 26/181 (14%)

Query: 212 TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAA-----DRGLISCLKAILDSG 266
             +HSA S      V+LLL+   + N  +  G +PLH+AA       G I   K +L++G
Sbjct: 75  LPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAG 134

Query: 267 -MADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVE 325
              DV+    E   T LH AA NG  + + +LLE  A+ N RN      L  AAK   +E
Sbjct: 135 ADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIE 194

Query: 326 CMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHI 385
            +++LL KG             LH SL K  L            ANV+ R+I   + + I
Sbjct: 195 LVKLLLDKG-------------LHLSLLKFNLEGVA-------NANVSKRNILNLTSLII 234

Query: 386 A 386
           A
Sbjct: 235 A 235

Length = 235

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 68.9 bits (168), Expect = 3e-12
 Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 9/159 (5%)

Query: 155 LHLAAFNGSIKGCSWLMLHGHDIN--FTKDSYTPLHFAVLGNYVDCAKFLIKNKAHI--- 209
           LH A   G +K    L+  G   +  F KD  TPLH A +   +D  K LI   A     
Sbjct: 72  LHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIP 131

Query: 210 ---HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSG 266
                + +H AV    +  ++LL+  +   ++ +  G +PL IA  +G I+  K +LDSG
Sbjct: 132 NTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSG 191

Query: 267 MADVDIKTKERRVTALHLAAENGYVECLRILLENHANCN 305
            A++D   K   V AL  A EN  ++ +R+ ++  A+CN
Sbjct: 192 -ANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCN 229

Length = 413

>gnl|CDD|215968 pfam00520, Ion_trans, Ion transport protein

 Score = 65.8 bits (161), Expect = 4e-12
 Identities = 37/204 (18%), Positives = 76/204 (37%), Gaps = 26/204 (12%)

Query: 564 VWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQ 623
           + YV  ++ T+E++ K          R+Y     N+ ++ +++   L+S +         
Sbjct: 2   LDYVFTVIFTLEMLLKFIA---LGFKRKYFRSPWNILDF-LVVLPSLVSLIL--FLLGED 55

Query: 624 NHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIV 683
           + +  V  LL    L+ ++ + P + T +    R     L L    + LL  F +    +
Sbjct: 56  SGLLRVLRLLRLLRLLRLLRRFPGLRTLLQSLGRSLKSLLNLLLLLLLLLFIFAIIGVQL 115

Query: 684 FPSEDR---------------FQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGT 728
           F  E                 F +     + +   +T E   + +         +     
Sbjct: 116 FGGELDKCCDKNENPINGNSNFDSYGEALLWLFRTLTTEGWGDVMYDTLVPGTVL----- 170

Query: 729 AHIVFTIFMLFVTVVLMNLLVGIA 752
             I F IF++   V+L+NLL+G+ 
Sbjct: 171 GKIFFVIFIILGGVLLLNLLIGVI 194

This family contains Sodium, Potassium, Calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane. A bacterial structure of the protein is known for the last two helices but is not the Pfam family due to it lacking the first four helices. Length = 194

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 66.6 bits (162), Expect = 2e-11
 Identities = 67/299 (22%), Positives = 137/299 (45%), Gaps = 25/299 (8%)

Query: 217 AVSTNAVDCVQLLLSLQINPNVLNNKGV-SPLHIAADRGLISCLKAILDSGMADVDIKTK 275
           A+     + ++LL+     P+V     + S LH A + G +  ++ +LD G    D+  K
Sbjct: 42  AMKFRDSEAIKLLMKHGAIPDV-KYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYK 100

Query: 276 ERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGS 335
           +  +T LHLA     ++ +++L+   A+ +  N  +  PLHLA     ++ +E+L+   +
Sbjct: 101 DG-MTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKA 159

Query: 336 QVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQ-- 393
            ++  DC   TPL  +++K  +++   ++LL  GAN++    FG +   +AAL    +  
Sbjct: 160 CLDIEDCCGCTPLIIAMAKGDIAI--CKMLLDSGANID---YFGKNG-CVAALCYAIENN 213

Query: 394 ---CVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQDPEASTKDI 450
               V   I  GAD         + + +I      +I  +   + +++  +  +A   DI
Sbjct: 214 KIDIVRLFIKRGAD--------CNIMFMIE-GEECTILDMICNMCTNLESEAIDALIADI 264

Query: 451 ELKLNFKYILQNGPDGEIGMLKIFQNDGQKEILEHPLCEAFLYVKWEKMKKFYLFRLVL 509
            +++  K  ++     +  M  I   +  K++ E  + E    +K EK+ K  +  L +
Sbjct: 265 AIRI-HKKTIRRDEGFKNNMSTIEDKEEFKDVFEKCIIE-LRRIKSEKIGKKNILDLCI 321

Length = 413

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 63.9 bits (156), Expect = 1e-10
 Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 33/173 (19%)

Query: 135 DLLDALHQLGADLSN-DKYGA--LHLAAFN--GSIKGCSWLMLHGHDINF-TKDSYTPLH 188
           +++  L + GA+++  D  G   L  A      S     +L+ +G ++N    D    LH
Sbjct: 87  EIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLH 146

Query: 189 FAVLGNYVD--CAKFLIKNKAHIH----------------------ETIVHSAVSTNAVD 224
             +  N +D    K LI     I+                       T +H AV  N  +
Sbjct: 147 LYLESNKIDLKILKLLIDKGVDINAKNRVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPE 206

Query: 225 CVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKER 277
            V+ LL L  NPN++N  G +PLHIA         K +L++G     IKT   
Sbjct: 207 FVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNG---PSIKTIIE 256

Length = 422

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 61.2 bits (149), Expect = 2e-09
 Identities = 98/625 (15%), Positives = 187/625 (29%), Gaps = 168/625 (26%)

Query: 234 INPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRV----TALHLAAENG 289
           +N N  +  G S L +AA       L  +L              R     T LH  +   
Sbjct: 43  LNINCPDRLGRSALFVAAIENENLELTELL---------LNLSCRGAVGDTLLHAISLEY 93

Query: 290 YV---ECLRILLENH----------ANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQ 336
                  L  LL                          LHLAA  Q+ E +++LL +G+ 
Sbjct: 94  VDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGAS 153

Query: 337 VNASDCDN---RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQ 393
           V A  C +   ++    S                           G SP++ AA      
Sbjct: 154 VPARACGDFFVKSQGVDSFY------------------------HGESPLNAAACLGSPS 189

Query: 394 CVDCLIMHGADISSKTPSGSS---ALSIIMRNTPSSISSVRKKLDSSISLQDPEASTKDI 450
            V  L    ADI +    G++    L +             +  + ++SL D    +K++
Sbjct: 190 IVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKEL 249

Query: 451 ELKLNFKYILQNGPDGEIGMLKIFQ-----NDGQKEILEHPLCEA--------------- 490
           E+ LN + +       + G + +F+        QK+ +  P  +                
Sbjct: 250 EVILNHQGLTPLKLAAKEGRIVLFRLKLAIKYKQKKFVAWPNGQQLLSLYWLEELDGWRR 309

Query: 491 -------------------------------FLYVKWEKMKKFYLFRLVLSSIFVLVLSV 519
                                              KW+   KF       S ++ L    
Sbjct: 310 KQSVLELIVVFVIGLKFPELSDMYLIAPLSRLGQFKWKPFIKFIFH--SASYLYFL---- 363

Query: 520 YVLTTLAQDCYNASKN-----ITLFTPTFCTKNSEIGHFLLRNPDFMETVWYVLALL-AT 573
           Y++   +   Y  ++          TP      + +        D +      L  L   
Sbjct: 364 YLIIFTSVAYYRPTRTDLRVTGLQQTPLEMLIVTWV--------DGLRLGEEKLIWLGGI 415

Query: 574 IELIRKIFGLVEYASFREY-CSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAV--- 629
            E I +++ ++++     Y  + +   F    +   FL+   +  R   +   +      
Sbjct: 416 FEYIHQLWNILDFGMNSFYLATFLDRPFAILFVTQAFLVLREHWLR---FDPTLIEEALF 472

Query: 630 --AVLLGWSNLMGMIGQLPSVGTYVAMFSRVQL-EFLKLFQAYICLLVGFTLTFCIVFPS 686
             A++L W NL+ +      +G    M  R+ L + L+    Y  +L GF      ++  
Sbjct: 473 AFALVLSWLNLLYIFRGNQHLGPLQIMIGRMILGDILRFLFIYAVVLFGFACGLNQLYQY 532

Query: 687 EDR-----FQNPIIG--------FINIL---------VMMTGELNVNEVLLGTEAKPPVL 724
            D        NP           +  +          ++  G+L          A     
Sbjct: 533 YDELKLNECSNPHARSCEKQGNAYSTLFETSQELFWAIIGLGDL---------LANEHKF 583

Query: 725 LKGTAHIVFTIFMLFVTVVLMNLLV 749
            +    ++F  + + + ++L+N+L+
Sbjct: 584 TEFVGLLLFGAYNVIMYILLLNMLI 608

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 59.3 bits (144), Expect = 4e-09
 Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 18/166 (10%)

Query: 255 LISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIP 314
           + +    I++  + D   K   + V  L+LA E   ++ ++ILL+N A+ N        P
Sbjct: 15  VKNIKYIIMEDDLNDYSYK---KPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTP 71

Query: 315 LHLAAKCQSV-----ECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWG 369
           LH  +  +       E +++LL  G+ VNA D +  TPL  ++SK   S   +E LL  G
Sbjct: 72  LHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNG 131

Query: 370 ANVNARDIFGYSPIHIAALSELSQC------VDCLIMHGADISSKT 409
           ANVN ++  G + +H+     L         +  LI  G DI++K 
Sbjct: 132 ANVNIKNSDGENLLHLY----LESNKIDLKILKLLIDKGVDINAKN 173

Length = 422

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 51.9 bits (125), Expect = 9e-09
 Identities = 19/54 (35%), Positives = 32/54 (59%)

Query: 278 RVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLL 331
             TALH AA +G +E ++ LLE   + N  +      LH+AA+  ++E +++LL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 56.6 bits (136), Expect = 4e-08
 Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 20/215 (9%)

Query: 155 LHLAAFNG-SIKGCSWLMLHGHDINFTKDSY-TPLHFA-VLGNYVDCAKFLIKNKAHIH- 210
           L+L A NG   +    L++ G D+N     Y TPLH A  L    D    L++  A+++ 
Sbjct: 311 LYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNA 370

Query: 211 -----ETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIA-ADRGLISCLKAILD 264
                +T +H A   N V  +  LL    +   L+ K  + LH A         +K ++D
Sbjct: 371 RDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLID 430

Query: 265 SGMADVDIKTKERRVTALHLAAENG-YVECLRILLENHANCNERNHKEQIPLHLAAKCQS 323
            G A+V+ K K+   T LH A +    ++ + +LL+N A+ N  N + Q PL +A +   
Sbjct: 431 RG-ANVNSKNKDLS-TPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIALEYHG 488

Query: 324 VECMEMLLRKGSQVNASDCDNRTPLHASLSKNILS 358
           +  + +LL  G+++     D+R  LH SL+ N+ S
Sbjct: 489 I--VNILLHYGAELR----DSRV-LHKSLNDNMFS 516

Length = 682

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 52.1 bits (124), Expect = 2e-07
 Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 9/205 (4%)

Query: 246 PLHIAADRGLISCLKAILDSGMADVDIKTKERRV-TALHLAAENGYVECLRILLENHANC 304
            L I      +  +  +L   +   +   K+  +   L L       E L  L+ +    
Sbjct: 8   LLLINKCFLDLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDRHL- 66

Query: 305 NERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEI 364
             R+   ++PLH AA     + +++LL  G+ VNA D D  TPLH +          +E+
Sbjct: 67  AARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEV 126

Query: 365 ---LLKWGA---NVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSI 418
              LL+ GA     N RD  G +P+H AAL+  +  V+ L+  GAD +S+   G +AL  
Sbjct: 127 AKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDP 186

Query: 419 -IMRNTPSSISSVRKKLDSSISLQD 442
                    +  +  K      L+ 
Sbjct: 187 AAKNGRIELVKLLLDKGLHLSLLKF 211

Length = 235

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 45.8 bits (109), Expect = 1e-06
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 297 LLEN-HANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLH 349
           LLE+   + N  +     PLHLAAK  ++E ++ LL+ G  +N  D D  T L 
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALD 54

Length = 56

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 49.4 bits (117), Expect = 2e-06
 Identities = 49/220 (22%), Positives = 76/220 (34%), Gaps = 45/220 (20%)

Query: 65  ISDELSYKVCKESIRASLLEAMKMSSGD------VNVLYAIENSLYEPDEMATLFSKASQ 118
           I+      +    +    L+    S         + +L A   S      +      A  
Sbjct: 11  INKCFLDLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDRHLAARD 70

Query: 119 AEKTTALLWCVFVKREDLLDALHQLGADLS-NDKYG--ALHLAAFNGSIKGCSW----LM 171
            +    L        + ++  L   GAD++  D  G   LHLAA NG+    +     L+
Sbjct: 71  LDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLL 130

Query: 172 LHGH---DINFTKDS--YTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCV 226
           L      D+N  +D    TPLH+A L    D  + L++  A                   
Sbjct: 131 LEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGA------------------- 171

Query: 227 QLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSG 266
                   +PN  N+ GV+ L  AA  G I  +K +LD G
Sbjct: 172 --------DPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203

Length = 235

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 45.3 bits (108), Expect = 2e-06
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 152 YGALHLAAFNGSIKGCSWLMLHGHDIN-FTKDSYTPLHFAVLGNYVDCAKFLI 203
             ALH AA +G ++   +L+  G DIN   +D  T LH A     ++  K L+
Sbjct: 2   RTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 45.3 bits (108), Expect = 2e-06
 Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 2/56 (3%)

Query: 243 GVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILL 298
           G + LH AA  G +  +K +L+ G  D++   ++   TALH+AAENG +E L++LL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKG-VDINRTDEDGN-TALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 44.5 bits (106), Expect = 2e-06
 Identities = 15/30 (50%), Positives = 22/30 (73%)

Query: 280 TALHLAAENGYVECLRILLENHANCNERNH 309
           T LHLAA NG++E +++LLE  A+ N R+ 
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 45.0 bits (107), Expect = 3e-06
 Identities = 15/43 (34%), Positives = 22/43 (51%)

Query: 276 ERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLA 318
               T LHLAA+ G +E ++ LL+   + N R+      L LA
Sbjct: 14  GNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 3/62 (4%)

Query: 120 EKTTALLWCVFVKREDLLDALHQLGADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHGHD 176
           +  TAL         +++  L + GAD+ + DK G  ALHLAA NG+++    L+ HG D
Sbjct: 27  DTDTALHLAARNGNLEIVKLLLEHGADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGAD 86

Query: 177 IN 178
           IN
Sbjct: 87  IN 88

Length = 91

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 48.7 bits (116), Expect = 1e-05
 Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 16/150 (10%)

Query: 259 LKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLA 318
           LKA LD  + D    +K R  T LH+AA  GY +C+ +LL++  N + R+      L  A
Sbjct: 545 LKAKLDPDIGD----SKGR--TPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNA 598

Query: 319 AKCQSVECMEMLLRKGSQVN---ASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNAR 375
              +  +   +L    S  +   A D      L  +  +N L+   ++ LLK G NV++ 
Sbjct: 599 ISAKHHKIFRILYHFASISDPHAAGDL-----LCTAAKRNDLTA--MKELLKQGLNVDSE 651

Query: 376 DIFGYSPIHIAALSELSQCVDCLIMHGADI 405
           D  G + + +A   +    V  LIM+GAD+
Sbjct: 652 DHQGATALQVAMAEDHVDMVRLLIMNGADV 681

Length = 823

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 17/54 (31%), Positives = 29/54 (53%)

Query: 210 HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAIL 263
             T +H A  +  ++ V+ LL   ++ N  +  G + LHIAA+ G +  LK +L
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 48.4 bits (115), Expect = 2e-05
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 283 HLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDC 342
            LAA    V   RILL   A+ N R++  + PLH+A     V+ + +LL  G+     D 
Sbjct: 88  QLAASGDAVG-ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDK 146

Query: 343 DNRTPL 348
           D +TPL
Sbjct: 147 DGKTPL 152

Length = 664

>gnl|CDD|165089 PHA02716, PHA02716, CPXV016; CPX019; EVM010; Provisional

 Score = 48.0 bits (114), Expect = 2e-05
 Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 22/215 (10%)

Query: 223 VDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISC--LKAILDSGMADVDIK--TKERR 278
           +D ++ L +  +N N+ NN  ++PLH     G +    +K I++ G  D+D+K       
Sbjct: 192 IDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELG-GDMDMKCVNGMSP 250

Query: 279 VTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLA-AKCQSVECMEMLLRKGSQV 337
           +    +  +N   E   I +E+      +N    +  ++  A+   +  +   L+ G ++
Sbjct: 251 IMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKL 310

Query: 338 NASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELS----- 392
           +  D   RT LH  + ++ +S   +++L ++G ++N  D  G + +H   LS LS     
Sbjct: 311 HYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLH-TYLSMLSVVNIL 369

Query: 393 ----------QCVDCLIMHGADISSKTPSGSSALS 417
                       + CLI  GADI++    G + L+
Sbjct: 370 DPETDNDIRLDVIQCLISLGADITAVNCLGYTPLT 404

Length = 764

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 47.6 bits (113), Expect = 3e-05
 Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 6/146 (4%)

Query: 229 LLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAEN 288
           LL  +++P++ ++KG +PLHIAA +G   C+  +L     +V I+      TAL  A   
Sbjct: 544 LLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHA-CNVHIRDANGN-TALWNAISA 601

Query: 289 GYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPL 348
            + +  RIL    +  +   H     L  AAK   +  M+ LL++G  V++ D    T L
Sbjct: 602 KHHKIFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATAL 659

Query: 349 HASLSKNILSVHPLEILLKWGANVNA 374
             +++++ + +  + +L+  GA+V+ 
Sbjct: 660 QVAMAEDHVDM--VRLLIMNGADVDK 683

Length = 823

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 42.6 bits (101), Expect = 4e-05
 Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 4/75 (5%)

Query: 348 LHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISS 407
           LH +     L +  +++LL+ GA+VN  D    + +H+AA +   + V  L+ HGAD+++
Sbjct: 1   LHLAAKNGNLEL--VKLLLEKGADVNLGD--TDTALHLAARNGNLEIVKLLLEHGADVNA 56

Query: 408 KTPSGSSALSIIMRN 422
           K   G++AL +  RN
Sbjct: 57  KDKDGNTALHLAARN 71

Length = 91

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 6/53 (11%)

Query: 184 YTPLHFAVLGNYVDCAKFLIKNKAHIH------ETIVHSAVSTNAVDCVQLLL 230
            T LH A +   ++  K+L++    I+       T +H A     ++ ++LLL
Sbjct: 2   RTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 14/28 (50%), Positives = 20/28 (71%)

Query: 314 PLHLAAKCQSVECMEMLLRKGSQVNASD 341
           PLHLAA+   +E +++LL  G+ VNA D
Sbjct: 5   PLHLAARNGHLEVVKLLLEAGADVNARD 32

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 44.1 bits (104), Expect = 3e-04
 Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 14/132 (10%)

Query: 316 HLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNAR 375
            LAA   +V    +LL  G+  N  D D RTPLH + +   + V  + +LL++GA+    
Sbjct: 88  QLAASGDAVG-ARILLTGGADPNCRDYDGRTPLHIACANGHVQV--VRVLLEFGADPTLL 144

Query: 376 DIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKL- 434
           D  G +P+ +A  +   + V  L  H         +            P S +     L 
Sbjct: 145 DKDGKTPLELAEENGFREVVQLLSRHSQCHFELGANAK----------PDSFTGKPPSLE 194

Query: 435 DSSISLQDPEAS 446
           DS IS   P+ S
Sbjct: 195 DSPISSHHPDFS 206

Length = 664

>gnl|CDD|165256 PHA02946, PHA02946, ankyin-like protein; Provisional

 Score = 43.9 bits (103), Expect = 3e-04
 Identities = 23/77 (29%), Positives = 41/77 (53%)

Query: 297 LLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNI 356
           LL    + NE +     PLH+A+K  +   + MLL  G+  NA D  ++TPL+     + 
Sbjct: 58  LLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDD 117

Query: 357 LSVHPLEILLKWGANVN 373
             +  + +L+++GA +N
Sbjct: 118 EVIERINLLVQYGAKIN 134

Length = 446

>gnl|CDD|222954 PHA02989, PHA02989, ankyrin repeat protein; Provisional

 Score = 44.0 bits (104), Expect = 3e-04
 Identities = 87/429 (20%), Positives = 176/429 (41%), Gaps = 59/429 (13%)

Query: 164 IKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYV--DCAKFLIKNKAHIH-----ETIVHS 216
                +L+  G D+N      + L   +    V     K LI N A ++     ET + +
Sbjct: 16  KNALEFLLRTGFDVNEEYRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKGYIETPLCA 75

Query: 217 AVSTNAVD------CVQLLLSLQINPNVLNNKGVSPL-------HIAADRGLISCLKAIL 263
            +    +        V+LLL    + N+    GVSP+       +I         L+ +L
Sbjct: 76  VLRNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINN----CDMLRFLL 131

Query: 264 DSGMADVDIKTKERRVTALHLAAENGYV--ECLRILLENHANCNER-NHKEQIPLHL--- 317
             G+   D+K   R    LH+  E+  V  + ++ILL    N  E+ +     P+++   
Sbjct: 132 SKGINVNDVKN-SRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLR 190

Query: 318 -AAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKN-ILSVHPLEIL---LKWGANV 372
                 S++ ++ L++KG  +  ++  + + L + L  N ILS    ++L   LK+   +
Sbjct: 191 NDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKY-IKI 249

Query: 373 NARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRK 432
           N +D  G++P+ I+A  +  +  + L+  G DI + +  G + L+  +++   +I  + +
Sbjct: 250 NKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKH--GNIDMLNR 307

Query: 433 KLDSSISLQDPEASTKDIELKLNFKYILQNGPDGEIGMLKIFQNDGQKEILEHPLCEAFL 492
            L         +       +K  F+Y  ++G +       +F N+ +  ++   +  +F 
Sbjct: 308 IL---------QLKPGKYLIKKTFEYFSEHGIND------LFFNEKKMLMMILLMQYSFT 352

Query: 493 YVKWEKMKKFYLFRLVLSSIFVLVLSVYVLTTLAQDCYNASKNITLFTPTFCTKNSEIGH 552
            +     K  Y  RL   +I    +  Y    L        KN++++   F  +   I  
Sbjct: 353 -IYPIFYKNCYEVRLAFPNI----IERYEKDLLLMKKETVGKNLSVYDLVFNREKEIIPV 407

Query: 553 FLLRNPDFM 561
             L+N +F+
Sbjct: 408 KFLKNENFL 416

Length = 494

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 38.9 bits (91), Expect = 4e-04
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)

Query: 233 QINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLA 285
            I+ N  +  G +PLH+AA  G +  ++ +L  G  D++++  +   TAL LA
Sbjct: 6   PIDLNATDGNGNTPLHLAAKYGALELVQWLLKPG-VDLNLRDSDGL-TALDLA 56

Length = 56

>gnl|CDD|165212 PHA02884, PHA02884, ankyrin repeat protein; Provisional

 Score = 43.0 bits (101), Expect = 4e-04
 Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 6/123 (4%)

Query: 203 IKNKAHIHET-IVHSAVSTNAVDCVQLLLSLQINPNVLN----NKGVSPLHIAADRGLIS 257
           IK K  I    I++S++  +  D +  +L L  +P        N   +PL  A D     
Sbjct: 25  IKKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDD 84

Query: 258 CLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHL 317
             K ++  G ADV+   +E ++T L+++  +G ++CL ILL   A+ N + +    P+ L
Sbjct: 85  AAKLLIRYG-ADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIEL 143

Query: 318 AAK 320
           A  
Sbjct: 144 ALM 146

Length = 300

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 37.2 bits (87), Expect = 7e-04
 Identities = 14/27 (51%), Positives = 20/27 (74%)

Query: 280 TALHLAAENGYVECLRILLENHANCNE 306
           T LHLAAENG +E +++LL+  A+ N 
Sbjct: 4   TPLHLAAENGNLEVVKLLLDKGADINA 30

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 38.1 bits (89), Expect = 8e-04
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 330 LLRKGSQ-VNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIA 386
           LL  G   +NA+D +  TPLH +     L +  ++ LLK G ++N RD  G + + +A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALEL--VQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 42.9 bits (101), Expect = 8e-04
 Identities = 35/143 (24%), Positives = 68/143 (47%), Gaps = 17/143 (11%)

Query: 185 TPLHFAVLGNYVDCAKFLIKNKAHIH------ETIVHSAVSTNAVDCVQLL--LSLQINP 236
           TPLH A    Y DC   L+K+  ++H       T + +A+S       ++L   +   +P
Sbjct: 560 TPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDP 619

Query: 237 NVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERR-VTALHLAAENGYVECLR 295
           +         L  AA R  ++ +K +L  G+   ++ +++ +  TAL +A    +V+ +R
Sbjct: 620 HA----AGDLLCTAAKRNDLTAMKELLKQGL---NVDSEDHQGATALQVAMAEDHVDMVR 672

Query: 296 ILLENHANCNERN-HKEQIPLHL 317
           +L+ N A+ ++ N   +  P  L
Sbjct: 673 LLIMNGADVDKANTDDDFSPTEL 695

Length = 823

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 41.9 bits (98), Expect = 0.001
 Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 11/128 (8%)

Query: 123 TALLWCVFVKREDLLDALHQLGADL---SNDKYGALHLAAFNGSIKGCSWLMLHGHDINF 179
           T L     +K+ D++  L   GAD    + DK+  LHLA   G IKG   L+ H   ++ 
Sbjct: 104 TPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDI 163

Query: 180 TKD-SYTPLHFAVLGNYVDCAKFLIKNKAHIHE-------TIVHSAVSTNAVDCVQLLLS 231
                 TPL  A+    +   K L+ + A+I           +  A+  N +D V+L + 
Sbjct: 164 EDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIK 223

Query: 232 LQINPNVL 239
              + N++
Sbjct: 224 RGADCNIM 231

Length = 413

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 37.2 bits (87), Expect = 0.001
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)

Query: 344 NRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLI 399
            RT LH +     L +  ++ LL+ G ++N  D  G + +HIAA +   + +  L+
Sbjct: 1   GRTALHKAAISGRLEL--VKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|165256 PHA02946, PHA02946, ankyin-like protein; Provisional

 Score = 42.0 bits (98), Expect = 0.001
 Identities = 53/235 (22%), Positives = 105/235 (44%), Gaps = 8/235 (3%)

Query: 213 IVHSAVSTNAVD--CVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADV 270
           I+H+      +D   V+ LL    +PN  ++ G  PLHIA+       +  +L  G AD 
Sbjct: 40  ILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHG-ADP 98

Query: 271 DIKTKERRVTALHLAA-ENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEM 329
           +   K+ +    +L+  ++  +E + +L++  A  N    +E     LA    S    + 
Sbjct: 99  NACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLLACTDPSERVFKK 158

Query: 330 LLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALS 389
           ++  G +    D   +  +H  L  +      +  ++K G + +  D  G +P+HI   S
Sbjct: 159 IMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVC-S 217

Query: 390 ELSQCVDC--LIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQD 442
           +  + VD   L++   D++ +   G S L+++++ T S    + K L +S  + D
Sbjct: 218 KTVKNVDIINLLLPSTDVNKQNKFGDSPLTLLIK-TLSPAHLINKLLSTSNVITD 271

Length = 446

>gnl|CDD|165195 PHA02859, PHA02859, ankyrin repeat protein; Provisional

 Score = 41.0 bits (96), Expect = 0.001
 Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 7/147 (4%)

Query: 280 TALHLAAENGYV--ECLRILLENHANCNERNHKEQI-PLHLAA---KCQSVECMEMLLRK 333
           T +    E   V  E L+ L+EN A+ N +     +  LH      K    E +++L+  
Sbjct: 53  TPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDS 112

Query: 334 GSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQ 393
           GS +   D D +  LH  +    + ++ +++L+  G +   +D    + ++   L    +
Sbjct: 113 GSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDK 172

Query: 394 -CVDCLIMHGADISSKTPSGSSALSII 419
              D L   G DI+    SG +   +I
Sbjct: 173 KIFDFLTSLGIDINETNKSGYNCYDLI 199

Length = 209

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 36.9 bits (86), Expect = 0.002
 Identities = 12/40 (30%), Positives = 23/40 (57%)

Query: 211 ETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIA 250
            T +H A    A++ VQ LL   ++ N+ ++ G++ L +A
Sbjct: 17  NTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 36.4 bits (85), Expect = 0.002
 Identities = 8/27 (29%), Positives = 15/27 (55%)

Query: 184 YTPLHFAVLGNYVDCAKFLIKNKAHIH 210
            TPLH A    +++  K L++  A ++
Sbjct: 3   NTPLHLAARNGHLEVVKLLLEAGADVN 29

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 36.4 bits (85), Expect = 0.002
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 242 KGVSPLHIAADRGLISCLKAILDSGMADVDIKTK 275
            G +PLH+AA  G +  +K +L++G ADV+ + K
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAG-ADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 41.4 bits (97), Expect = 0.002
 Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 4/91 (4%)

Query: 215 HSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKT 274
             A S +AV   ++LL+   +PN  +  G +PLHIA   G +  ++ +L+ G AD  +  
Sbjct: 88  QLAASGDAVG-ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFG-ADPTLLD 145

Query: 275 KERRVTALHLAAENGYVECLRILLENHANCN 305
           K+ + T L LA ENG+ E +++L   H+ C+
Sbjct: 146 KDGK-TPLELAEENGFREVVQLLS-RHSQCH 174

Length = 664

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 35.2 bits (82), Expect = 0.004
 Identities = 10/31 (32%), Positives = 20/31 (64%)

Query: 379 GYSPIHIAALSELSQCVDCLIMHGADISSKT 409
           G +P+H+AA +   + V  L+  GAD++++ 
Sbjct: 2   GNTPLHLAARNGHLEVVKLLLEAGADVNARD 32

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	854
KOG0510|consensus	929		100.0
TIGR00870	743	trp transient-receptor-potential calcium channel p	100.0
KOG3609|consensus	822		100.0
KOG3676|consensus	782		100.0
PHA02946	446	ankyin-like protein; Provisional	100.0
PHA02876	682	ankyrin repeat protein; Provisional	100.0
KOG3614|consensus	1381		100.0
PHA02876	682	ankyrin repeat protein; Provisional	100.0
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	100.0
PHA02946	446	ankyin-like protein; Provisional	100.0
KOG0510|consensus	929		100.0
PHA02874	434	ankyrin repeat protein; Provisional	100.0
PHA02730	672	ankyrin-like protein; Provisional	100.0
PHA02730	672	ankyrin-like protein; Provisional	100.0
PHA02874	434	ankyrin repeat protein; Provisional	100.0
PHA02917	661	ankyrin-like protein; Provisional	100.0
PHA03095	471	ankyrin-like protein; Provisional	100.0
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	100.0
PHA03100	480	ankyrin repeat protein; Provisional	100.0
PHA02917	661	ankyrin-like protein; Provisional	100.0
PHA03095	471	ankyrin-like protein; Provisional	100.0
PHA02878	477	ankyrin repeat protein; Provisional	100.0
PHA02989	494	ankyrin repeat protein; Provisional	100.0
PHA02878	477	ankyrin repeat protein; Provisional	100.0
PHA03100	480	ankyrin repeat protein; Provisional	100.0
KOG4177|consensus	1143		100.0
PHA02989	494	ankyrin repeat protein; Provisional	100.0
PHA02791	284	ankyrin-like protein; Provisional	100.0
PHA02791	284	ankyrin-like protein; Provisional	100.0
KOG0508|consensus	615		100.0
KOG4177|consensus	1143		100.0
PHA02798	489	ankyrin-like protein; Provisional	100.0
KOG4412|consensus	226		100.0
PHA02875	413	ankyrin repeat protein; Provisional	100.0
PHA02875	413	ankyrin repeat protein; Provisional	100.0
PHA02792	631	ankyrin-like protein; Provisional	100.0
KOG4412|consensus	226		100.0
PHA02798	489	ankyrin-like protein; Provisional	100.0
KOG0508|consensus	615		100.0
KOG0509|consensus	600		100.0
PHA02792	631	ankyrin-like protein; Provisional	99.97
KOG0509|consensus	600		99.97
KOG4369|consensus	2131		99.96
PHA02795	437	ankyrin-like protein; Provisional	99.95
PHA02795	437	ankyrin-like protein; Provisional	99.95
PHA02859	209	ankyrin repeat protein; Provisional	99.95
PHA02859	209	ankyrin repeat protein; Provisional	99.95
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.94
PLN03223	1634	Polycystin cation channel protein; Provisional	99.93
KOG0502|consensus	296		99.93
KOG4369|consensus	2131		99.92
KOG0502|consensus	296		99.92
KOG0507|consensus	854		99.9
KOG0507|consensus	854		99.89
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.89
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.88
KOG0505|consensus	527		99.85
PF08016	425	PKD_channel: Polycystin cation channel; InterPro:	99.84
KOG0514|consensus	452		99.84
KOG0514|consensus	452		99.84
KOG0505|consensus	527		99.84
PHA02743	166	Viral ankyrin protein; Provisional	99.82
PHA02743	166	Viral ankyrin protein; Provisional	99.8
PHA02884	300	ankyrin repeat protein; Provisional	99.79
PHA02884	300	ankyrin repeat protein; Provisional	99.79
PHA02741	169	hypothetical protein; Provisional	99.79
PHA02741	169	hypothetical protein; Provisional	99.78
KOG0512|consensus	228		99.77
KOG3599|consensus	798		99.77
KOG0512|consensus	228		99.75
PHA02736	154	Viral ankyrin protein; Provisional	99.75
PHA02736	154	Viral ankyrin protein; Provisional	99.71
KOG3676|consensus	782		99.7
KOG0195|consensus	448		99.66
KOG0195|consensus	448		99.66
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.62
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.61
PF00520	200	Ion_trans: Ion transport protein calcium channel s	99.57
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.56
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.52
KOG4214|consensus	117		99.44
KOG4214|consensus	117		99.44
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.36
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.31
KOG1710|consensus	396		99.29
KOG0515|consensus	752		99.26
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.25
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.23
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.21
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.2
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.19
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.17
KOG0515|consensus	752		99.15
KOG1710|consensus	396		99.15
KOG2302|consensus	1956		99.1
KOG2301|consensus	1592		98.87
KOG3609|consensus	822		98.69
PF13606	30	Ank_3: Ankyrin repeat	98.64
KOG0782|consensus	1004		98.62
KOG0783|consensus	1267		98.57
KOG0783|consensus	1267		98.54
KOG0818|consensus	669		98.52
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.5
PF13606	30	Ank_3: Ankyrin repeat	98.48
KOG0818|consensus	669		98.46
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.4
KOG2301|consensus	1592		98.37
KOG0506|consensus	622		98.33
KOG0782|consensus	1004		98.32
KOG0506|consensus	622		98.2
KOG0705|consensus	749		98.13
KOG0705|consensus	749		98.12
KOG2302|consensus	1956		98.09
KOG0522|consensus	560		97.93
KOG0511|consensus	516		97.83
KOG3733|consensus	566		97.82
KOG0521|consensus	785		97.79
KOG0521|consensus	785		97.77
KOG0522|consensus	560		97.76
KOG2384|consensus	223		97.63
KOG0511|consensus	516		97.62
KOG2384|consensus	223		97.57
KOG0520|consensus	975		97.56
KOG3713|consensus	477		97.44
KOG0520|consensus	975		97.05
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	96.34
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	96.34
KOG0498|consensus	727		96.22
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	96.18
KOG2505|consensus	591		96.07
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	95.81
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	95.68
KOG2505|consensus	591		95.6
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	95.3
KOG1545|consensus	507		94.98
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	92.88
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	90.3
KOG1419|consensus	654		89.3
KOG3533|consensus	2706		88.2
COG4272	125	Predicted membrane protein [Function unknown]	87.54
PLN03223	1634	Polycystin cation channel protein; Provisional	86.65
KOG4390|consensus	632		81.52

>KOG0510|consensus

Probab=100.00  E-value=2.6e-102  Score=832.78  Aligned_cols=700  Identities=29%  Similarity=0.451  Sum_probs=604.7

Q ss_pred             HhcCCChHHHHHHHcCCCChhHHHHHhhhcccccCCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCccHHHHHHHcCC
Q psy817           87 KMSSGDVNVLYAIENSLYEPDEMATLFSKASQAEKTTALLWCVFVKREDLLDALHQLGADLSN---DKYGALHLAAFNGS  163 (854)
Q Consensus        87 ~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~---~g~t~L~~A~~~g~  163 (854)
                      ++..|++.+..+...+..   ........+.|..+++|||+|+.....+.++.|++.|++.+.   .+.+|+|+|+..|+
T Consensus        57 ~~~~gd~~~~~~~~~~y~---~~~~~~~~a~D~~~n~~l~~a~~~~~~~~i~~Lls~gad~~~~n~~~~aplh~A~~~~~  133 (929)
T KOG0510|consen   57 KRAFGDTELHHASARNYI---LSKLAISYAKDSADNTPLHAAVEYNQGDKIQVLLSYGADTPLRNLNKNAPLHLAADSGN  133 (929)
T ss_pred             hhhhchhHHHHHHhhcch---hhhhhhhhhhhcccCchhHHHhhcchHHHHHHHHhcCCCCChhhhhccCchhhccccch
Confidence            345567777766655533   112223356788899999999999999999999999999854   89999999999999


Q ss_pred             HHHHHHHHhCCCCccccCC-CccHHHHHHhCCCHHHHHHHHhCCCCC------CchHHHHHHHcCCHHHHHHHHH-----
Q psy817          164 IKGCSWLMLHGHDINFTKD-SYTPLHFAVLGNYVDCAKFLIKNKAHI------HETIVHSAVSTNAVDCVQLLLS-----  231 (854)
Q Consensus       164 ~~iv~~Ll~~g~~~~~~~~-g~t~L~~A~~~~~~~iv~~Ll~~~~~~------~~t~L~~A~~~~~~~~v~~Ll~-----  231 (854)
                      .++.+.|+++|+|+|..++ |.||||+||.+++.|..+.|++.|+++      |.+|+|.|+++|..++.+..+.     
T Consensus       134 ~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~  213 (929)
T KOG0510|consen  134 YSCLKLLLDYGADVNLEDENGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYE  213 (929)
T ss_pred             HHHHHHHHHhcCCccccccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccch
Confidence            9999999999999998774 889999999999999999999999988      7899999999999999999998     


Q ss_pred             CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccc-------------ccCCcCcHHHHHHHcCCHHHHHHHH
Q psy817          232 LQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIK-------------TKERRVTALHLAAENGYVECLRILL  298 (854)
Q Consensus       232 ~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~-------------~~~~~~t~L~~A~~~g~~~~v~~Ll  298 (854)
                      .+..+|..+..|.||||.|+..|+.++++.+|+++...-+.+             .+..|.||||+|+++|+++.++.|+
T Consensus       214 r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll  293 (929)
T KOG0510|consen  214 RQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLL  293 (929)
T ss_pred             hhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHH
Confidence            578899999999999999999999999999999885433322             1356789999999999999999999


Q ss_pred             hcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHh-CCC-CCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCc---
Q psy817          299 ENHANCNERNHKEQIPLHLAAKCQSVECMEMLLR-KGS-QVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVN---  373 (854)
Q Consensus       299 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~-~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n---  373 (854)
                      ..|++++.++.++.||||.||.+|+.++++-||+ .|. ..|..|..|.||||.|++.|  +..++++|+++|++.+   
T Consensus       294 ~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~g--H~~v~qlLl~~GA~~~~~~  371 (929)
T KOG0510|consen  294 GFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSG--HDRVVQLLLNKGALFLNMS  371 (929)
T ss_pred             HcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcC--HHHHHHHHHhcChhhhccc
Confidence            9999999999999999999999999999999999 544 67888999999999999999  5667999999999887   


Q ss_pred             cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHHhhhhcCCcccccCCCCCcchhHhh
Q psy817          374 ARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQDPEASTKDIELK  453 (854)
Q Consensus       374 ~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  453 (854)
                      ..|.+|.||||.|+..|+..+|++|+.+|+++..+|+.|.|++++.- .............+.|....-.+..+++.+..
T Consensus       372 e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~~g~SA~~~~~-~~~~p~~~~~~~~n~c~~~~~i~~~pe~~e~v  450 (929)
T KOG0510|consen  372 EADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKNKKGKSAFDTRP-DRCLPVFVHRSPFNKCPTTELIEPLPECFEIV  450 (929)
T ss_pred             ccccCCchhhhHHHHhccHHHHHHHHHcCCceeeccccccccccccc-cccccHHHhhCCCCCcchhhhhccchHHHHHH
Confidence            56999999999999999999999999999999999999999999621 12223334455556666666666677888888


Q ss_pred             hhhhhhhhcCCCC---c-----chhhHhhhhcchhhhccChhHHHHHHHHHhhhhHHHHHH-HHHHHHHHHHHHHhhhcc
Q psy817          454 LNFKYILQNGPDG---E-----IGMLKIFQNDGQKEILEHPLCEAFLYVKWEKMKKFYLFR-LVLSSIFVLVLSVYVLTT  524 (854)
Q Consensus       454 ~~~~~l~~~~~~~---~-----~~~L~~~v~~~~~~ll~Hp~vq~lL~~kW~~~~~~~~~~-~~~~~~f~~~~~~~~l~~  524 (854)
                      .+|..+...++..   .     ...++.+++.+++++++||+|+.+|..||.++|+++..+ +++|++|+++++.|++..
T Consensus       451 lD~c~l~~~e~~~~~~~~Q~~~~~~~~~mv~~~~~eLL~HPL~ssfL~mKW~~~g~~~~~~nL~~Y~lFlv~lT~Yv~~~  530 (929)
T KOG0510|consen  451 LDFCILKSQERKDSPTPLQDEAAPILNIMVDKEQIELLEHPLSSSFLFMKWNRYGKYFHLNNLLIYSLFLVSLTIYVLLI  530 (929)
T ss_pred             HHHHHHHHhhccCCCChhhhhhhhHHHHHhhhhHHHHhcChhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            8888887666421   1     236788999999999999999999999999999987666 999999999999999999


Q ss_pred             ccccccccCCCcccccCcccccccccccccccCcch-hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhchhhHHHHH
Q psy817          525 LAQDCYNASKNITLFTPTFCTKNSEIGHFLLRNPDF-METVWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWY  603 (854)
Q Consensus       525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~y~~~~wN~~d~~  603 (854)
                      .++..++.+.+      ..|...++-++.++..++. +.++.++++.+.++.+++|+.|+  +++.+.||.++.|++||+
T Consensus       531 ~~~~~~n~~~~------~~~~~~s~~se~lr~~~t~~i~~~~ili~~~i~~~~~~E~iQi--fqqk~~Y~~~i~Nimew~  602 (929)
T KOG0510|consen  531 KAGMAFNSSGT------EIISKTSDHSEILRNNNTMLIAFCMILIFTSIILGILRECIQI--FQQKRHYFMDIENIMEWF  602 (929)
T ss_pred             ccccccccccc------eeehhccchhhhhhccchhHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhhhHHHHHHH
Confidence            98887776552      5666777777777666633 33344445566788999999998  789999999999999999


Q ss_pred             HHHHHHHHHHhccC-cccchhhhHHHHHHHHHHHHHHHHHcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy817          604 MIISVFLISCVYTK-RTYIWQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCI  682 (854)
Q Consensus       604 ~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~ll~~~~~~~~~G~~v~m~~~~~~d~~~f~~i~~~~l~aF~~~f~~  682 (854)
                      ++++.++++..++. .+.+|||+++|++++|+|++|+.+++++|.+|+||+|+..|.+.++|++.+|+++++||+++||+
T Consensus       603 iyts~li~v~~~~~~~~~~~Q~~laa~aV~l~W~nllLmi~~~p~~gIfvvM~~~I~ktflk~f~vfs~lliaF~lsFYV  682 (929)
T KOG0510|consen  603 IYTSALITVYPLFFEITAHLQWVLAAFAVLLGWMNLLLMIGRFPVFGIFVVMLEVILKTFLKSFMVFSILLIAFGLSFYV  682 (929)
T ss_pred             HHhhhhheeehhhhhhHHHHHHHHHHHHHHHHHHHHHHHHccCCccceehHHHHHHHHHHHHHHHHHHHHHHHhhhhhee
Confidence            99998887777666 66889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCccCChHHHHHHHHHHHhcCcchh-hhhccCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHh
Q psy817          683 VFPSEDRFQNPIIGFINILVMMTGELNVN-EVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHK  761 (854)
Q Consensus       683 l~~~~~~f~~~~~s~~~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~ilf~~f~~~~~ivLlNlLIA~~~~~~~~v~~  761 (854)
                      ||+...+|++|+.|..++|.||.||.||. ..+.......+..+|+++.++|++|+++|+|||||||||++++|+|.|++
T Consensus       683 ll~~~~eFs~p~ms~l~t~~MMiGe~dft~~~~~~~~~~~~l~~~v~s~~~f~~F~IfmtIvLMNLLiGLAV~DIq~vqk  762 (929)
T KOG0510|consen  683 LLNKSSEFSNPFMSKLETFVMMIGENDFTKVMFTEEFKRNSLAHPVLSFAIFVLFTIFMTIVLMNLLIGLAVGDIQGVQK  762 (929)
T ss_pred             eecCCCCcCCCcchhhhhHHHhhcccccccccccchhhcCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Confidence            99999999999999999999999999998 55555555667778899999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHhhh-ccccCCCC
Q psy817          762 TAGLDKLVRQTELIHSLELALFQGYLPNRIVSMLKS-QALLTPSS  805 (854)
Q Consensus       762 ~a~~~~~~~~~~~i~~~e~~l~~~~lp~~~~~~~~~-~~~~~~~~  805 (854)
                      +|++.++++|++++.++|+     .||.++++...+ +...+|..
T Consensus       763 ~A~LkrlamQv~L~s~iE~-----~L~~~~l~~~~k~~~~~y~~~  802 (929)
T KOG0510|consen  763 HAELKRLAMQVNLHSRIEQ-----KLPHHFLQRVDKKSTIVYPNK  802 (929)
T ss_pred             HHHHHHHHHHHHHHHHHHH-----HccchhHhhhhhcceEecccc
Confidence            9999999999999999999     466666655533 44455554

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=100.00  E-value=6.5e-64  Score=597.10  Aligned_cols=538  Identities=15%  Similarity=0.151  Sum_probs=352.4

Q ss_pred             CccHHHHHHhCCCHHHHHHHHhC--CCCC------CchHHH-HHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Q psy817          183 SYTPLHFAVLGNYVDCAKFLIKN--KAHI------HETIVH-SAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADR  253 (854)
Q Consensus       183 g~t~L~~A~~~~~~~iv~~Ll~~--~~~~------~~t~L~-~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~  253 (854)
                      ++.+++.|++.|+.+.++.++++  +.++      |+|||| .|+.+++.++++.|+++|+    .+..|.||||.|+.+
T Consensus        17 ~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~~~   92 (743)
T TIGR00870        17 EEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAISLE   92 (743)
T ss_pred             HHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHHhc
Confidence            56677777777777777777766  4333      567777 6666667777777776665    455677777766652


Q ss_pred             C---CHHHHHHHHHcCCC--------CccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCC--------------
Q psy817          254 G---LISCLKAILDSGMA--------DVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERN--------------  308 (854)
Q Consensus       254 g---~~~iv~~Ll~~~~~--------~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~--------------  308 (854)
                      +   ..++++.+.+.+..        +.+......|.||||+|+.+|+.++|++|+++|++++.++              
T Consensus        93 ~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~  172 (743)
T TIGR00870        93 YVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSF  172 (743)
T ss_pred             cHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcc
Confidence            1   12233333332211        0011112345677777777777777777777777666432              


Q ss_pred             CCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCC-------hHHHHHHHhCCCCC-------cc
Q psy817          309 HKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILS-------VHPLEILLKWGANV-------NA  374 (854)
Q Consensus       309 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~-------~~~v~~Ll~~g~d~-------n~  374 (854)
                      ..|.||||.|+..|+.+++++|+++|+|++..|..|+||||.|+..+...       ..+.+++++.+...       +.
T Consensus       173 ~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i  252 (743)
T TIGR00870       173 YHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVI  252 (743)
T ss_pred             cccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhh
Confidence            24667777777777777777777777777777777777777766654211       12334444443332       44


Q ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHHhhhhcCCcccccCCCCCcchhHhhh
Q psy817          375 RDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQDPEASTKDIELKL  454 (854)
Q Consensus       375 ~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  454 (854)
                      .|.+|.||||+|+..|+.+++++|++.+.+.........++.+.+...                                
T Consensus       253 ~N~~g~TPL~~A~~~g~~~l~~lLL~~~~~~kk~~a~~~~~~~~~~~~--------------------------------  300 (743)
T TIGR00870       253 LNHQGLTPLKLAAKEGRIVLFRLKLAIKYKQKKFVAWPNGQQLLSLYW--------------------------------  300 (743)
T ss_pred             cCCCCCCchhhhhhcCCccHHHHHHHHHHhcceeeccCcchHhHhhhc--------------------------------
Confidence            566677777777777777777777665544332223333333333211                                


Q ss_pred             hhhhhhhcCCCCcchhhHhhhh-------cchhhhccChhHHHHHHHHHhhhhHHH-HHHHHHHHHHHHHHHHhhhcccc
Q psy817          455 NFKYILQNGPDGEIGMLKIFQN-------DGQKEILEHPLCEAFLYVKWEKMKKFY-LFRLVLSSIFVLVLSVYVLTTLA  526 (854)
Q Consensus       455 ~~~~l~~~~~~~~~~~L~~~v~-------~~~~~ll~Hp~vq~lL~~kW~~~~~~~-~~~~~~~~~f~~~~~~~~l~~~~  526 (854)
                       +..+.  ........++.++.       ..........++.+++..||..+.|+. .....+|+++++++++.....  
T Consensus       301 -~~~~~--~~~~~~~~~~ll~~~~~~~~~p~~~~~~~~~P~~~l~~~kw~pf~kf~~~~~~~~~fl~l~~~~~~~~~~--  375 (743)
T TIGR00870       301 -LEELD--GWRRKQSVLELIVVFVIGLKFPELSDMYLIAPLSRLGQFKWKPFIKFIFHSASYLYFLYLIIFTSVAYYR--  375 (743)
T ss_pred             -cccCC--cccccccHHHHHHHHHHhhcChHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--
Confidence             00000  00011122222221       233445555667889999999998864 444555555555555443321  


Q ss_pred             ccccccCCCcccccCcccccccccccccccCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhchhhHHHHHHHH
Q psy817          527 QDCYNASKNITLFTPTFCTKNSEIGHFLLRNPDFMETVWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMII  606 (854)
Q Consensus       527 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~y~~~~wN~~d~~~~~  606 (854)
                      +. .....                  .-...|++.++..++|+.++.+..+++++    ..+.+.|++++||++|++++.
T Consensus       376 ~~-~~~~~------------------~~~~~~~~~e~~~~~~~~~~~~~e~~~~~----~~g~~~y~~~~wn~~d~~~~~  432 (743)
T TIGR00870       376 PT-RTDLR------------------VTGLQQTPLEMLIVTWVDGLRLGEEKLIW----LGGIFEYIHQLWNILDFGMNS  432 (743)
T ss_pred             cc-ccccc------------------cccCCCCcchhhHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
Confidence            10 00000                  00112456666667777777666666554    467889999999999996654


Q ss_pred             HHHHHHHhc------c-------------CcccchhhhHHHHHHHHHHHHHHHHHcccCccchHHHHHHHHHH-HHHHHH
Q psy817          607 SVFLISCVY------T-------------KRTYIWQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQL-EFLKLF  666 (854)
Q Consensus       607 ~~~~~~~~~------~-------------~~~~~~~~~~~a~~~~l~~~~ll~~~~~~~~~G~~v~m~~~~~~-d~~~f~  666 (854)
                      +++..+...      .             .....+...++|++++++|+|+++|+++++.+|||++|+++|++ |+++|+
T Consensus       433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~l~~~rll~~~~~~~~lGp~~i~l~~mi~~dl~~F~  512 (743)
T TIGR00870       433 FYLATFLDRPFAILFVTQAFLVLREHWLRFDPTLIEEALFAFALVLSWLNLLYIFRGNQHLGPLQIMIGRMILGDILRFL  512 (743)
T ss_pred             HHHHHHHHhHHHHhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHhhchhcCchHHHHHHHHHHHHHHHH
Confidence            322211100      0             01122456689999999999999999999999999999999999 999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCC--------------------CccCChHHHHHHHHHHHhcCcchhhhhccCCCCCccccc
Q psy817          667 QAYICLLVGFTLTFCIVFPSE--------------------DRFQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLK  726 (854)
Q Consensus       667 ~i~~~~l~aF~~~f~~l~~~~--------------------~~f~~~~~s~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~  726 (854)
                      ++|++|++|||++++++|..+                    ..|+++..++.++|++++|+.|+..       ..+.+++
T Consensus       513 ~i~~v~l~aF~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~s~~~lf~~~~G~~~~~~-------~~~~~~~  585 (743)
T TIGR00870       513 FIYAVVLFGFACGLNQLYQYYDELKLNECSNPHARSCEKQGNAYSTLFETSQELFWAIIGLGDLLA-------NEHKFTE  585 (743)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccccCHHHHHHHHHHHHcCCccccc-------ccccchh
Confidence            999999999999999998531                    5699999999999999999988731       1344567


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhcCCCcHHHHH
Q psy817          727 GTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKTAGLDKLVRQTELIHSLELALFQGYLPNRIVS  793 (854)
Q Consensus       727 ~~~~ilf~~f~~~~~ivLlNlLIA~~~~~~~~v~~~a~~~~~~~~~~~i~~~e~~l~~~~lp~~~~~  793 (854)
                      +++.++|++|+++++|||+|||||||++||++|+++++.+|+++|++++++||+.  .+++|+||+.
T Consensus       586 ~~~~il~~~y~~i~~ilLlNlLIAmm~~t~~~v~~~~~~~wk~~r~~~~~~y~~~--~~~~p~P~~~  650 (743)
T TIGR00870       586 FVGLLLFGAYNVIMYILLLNMLIAMMGNTYQLIADDADEEWKFQRAKLWMSYERE--GGTCPPPFNI  650 (743)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHhc--CCCCCCCcee
Confidence            9999999999999999999999999999999999999999999999999999984  4688988873

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>KOG3609|consensus

Probab=100.00  E-value=2e-61  Score=526.03  Aligned_cols=543  Identities=19%  Similarity=0.203  Sum_probs=394.7

Q ss_pred             CchHHHHHHHcCCHHHHHHHHHC----CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHH
Q psy817          210 HETIVHSAVSTNAVDCVQLLLSL----QINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLA  285 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~~Ll~~----g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A  285 (854)
                      +......|+++|+...|+..++.    ..++|+.|.-|+++|+.|+.+.+.+++++|++++        ...| .+|.+|
T Consensus        25 ~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~--------~~~g-dALL~a   95 (822)
T KOG3609|consen   25 GEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTS--------SEEG-DALLLA   95 (822)
T ss_pred             hhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCc--------cccc-hHHHHH
Confidence            45567778899999988888875    2678999999999999999999999999999976        1224 899999


Q ss_pred             HHcCCHHHHHHHHhcCCCc----------CCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcC
Q psy817          286 AENGYVECLRILLENHANC----------NERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKN  355 (854)
Q Consensus       286 ~~~g~~~~v~~Ll~~~~~~----------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~  355 (854)
                      ++.|.+++|+.++.+....          ...-..+.||+.+||..+++|+++.|+++|+.+.........+-.+-....
T Consensus        96 I~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~PH~~~C~C~~C~~~~~  175 (822)
T KOG3609|consen   96 IAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIPHDIRCECKTCKRETV  175 (822)
T ss_pred             HHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCCcccccCchHhhhccc
Confidence            9999999999999875432          123345789999999999999999999999988655443333222222211


Q ss_pred             CCChHHHHHHHhCC--CCCccCCCCCCCHHHHHHHcCC--HHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHHhh
Q psy817          356 ILSVHPLEILLKWG--ANVNARDIFGYSPIHIAALSEL--SQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVR  431 (854)
Q Consensus       356 ~~~~~~v~~Ll~~g--~d~n~~d~~g~t~L~~A~~~~~--~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~  431 (854)
                      ..+.+....+--+.  +.+...--...-|...|.+...  .++...=.+                   .++...++.  .
T Consensus       176 ~dslhS~srin~yraLaSpa~i~LsS~DPiltAf~LS~eL~~La~~E~E-------------------fk~dY~~Ls--~  234 (822)
T KOG3609|consen  176 TDSLHSLSRVNIYRALASPALIWLSSDDPILTAFALSWDLQQLASDELE-------------------FKEDYRDLS--M  234 (822)
T ss_pred             cCCcchHHHHHHHHHhhcHHHHHccCCcHHHHHHHHHHHHHHHHHHHHH-------------------HHHHHHHHH--H
Confidence            11111111110000  0000000001112222222110  000000000                   000111111  1


Q ss_pred             hhcCCcccccCCCCCcchhHhhhhhhhhhh-cCCCCcchhhHhhhhcchhhhccChhHHHHHHHHHhh--hhHHHHHHHH
Q psy817          432 KKLDSSISLQDPEASTKDIELKLNFKYILQ-NGPDGEIGMLKIFQNDGQKEILEHPLCEAFLYVKWEK--MKKFYLFRLV  508 (854)
Q Consensus       432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~L~~~v~~~~~~ll~Hp~vq~lL~~kW~~--~~~~~~~~~~  508 (854)
                      .-.+....+.++.+.+++.+..+|++.-.. .-.+.++++|+++++++||+|++||+|||+|...|+.  .++....+++
T Consensus       235 qcq~F~v~LLdq~r~s~Ele~iLn~~~~~~~~~~~~sl~RLklAIkyeqK~FVahpNcQq~L~siWy~g~R~~~~~~K~~  314 (822)
T KOG3609|consen  235 QCQRFAVDLLDQARTSDELEMILNNRNNCPERMTRISLPRLKLAIKYEQKEFVAHPNCQQLLKSVWYSGWRRKGIKPKFD  314 (822)
T ss_pred             HHHHHHHHHHHHhcchHHHHHHHcCCCCCcccccccccHHHHHHHHHhhhheecCccHHHHHHHHHhhhhhhcchHHHHH
Confidence            112334556777788888888888764421 2225789999999999999999999999999999998  4456677777


Q ss_pred             HHHHHHHHHHHhhhccccccccccCCCc-ccccCcccccccccc------------------cccccCcchhhHHHHHHH
Q psy817          509 LSSIFVLVLSVYVLTTLAQDCYNASKNI-TLFTPTFCTKNSEIG------------------HFLLRNPDFMETVWYVLA  569 (854)
Q Consensus       509 ~~~~f~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~  569 (854)
                      .+..+.++++.+.+.+...+....+... .++-...|+..|++.                  +.-.+.|+++|++.+.|+
T Consensus       315 ~~~~~~~~~P~~~l~yllap~S~~G~~~r~PfmKFi~H~~Sy~~FL~LL~l~s~~~~~~~~~~~~g~~p~~vE~li~~wV  394 (822)
T KOG3609|consen  315 AWRFLRLCFPMPSLVYLLAPMSRKGTTMRKPFMKFIAHITSYLVFLILLILASLIGFYFAWTDSRGVTPQALEILIYLWV  394 (822)
T ss_pred             HHHHHHHHhHHHHHHHHhCCCCcccchhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCcHHHHHHHHHH
Confidence            7777777777777777666666665544 344445555555442                  122355788999999999


Q ss_pred             HHHHHHHHHHHHhhhhhhhhhhhhhchhhHHHHHHHHHHHHHHHhccC-------------cccch--------hhhHHH
Q psy817          570 LLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTK-------------RTYIW--------QNHVGA  628 (854)
Q Consensus       570 ~~~~~~~~~e~~~~~~~~~~~~y~~~~wN~~d~~~~~~~~~~~~~~~~-------------~~~~~--------~~~~~a  628 (854)
                      ++++|.++++++    ..|++.|+.++||++|+.++..++..+..+..             ....|        ...++|
T Consensus       395 ~G~iw~E~k~lw----~~G~~~y~~~~Wn~lDf~m~siyl~s~~lr~~a~~~~~~~~~~~~~R~~W~~~dp~ll~E~lfA  470 (822)
T KOG3609|consen  395 MGLIWEEIKELW----RVGRDGYLAFWWNWLDFAMISIYLASFILRAVAWGKREAFDPSSVDRMHWPSFDPSLLAEGLFA  470 (822)
T ss_pred             HHHHHHHHHHHH----hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccchhhCCCCcHHHHHHHHHH
Confidence            999999999987    47899999999999999876543322221110             01112        245899


Q ss_pred             HHHHHHHHHHHHHHcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----------------CccCC
Q psy817          629 VAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSE----------------DRFQN  692 (854)
Q Consensus       629 ~~~~l~~~~ll~~~~~~~~~G~~v~m~~~~~~d~~~f~~i~~~~l~aF~~~f~~l~~~~----------------~~f~~  692 (854)
                      +|.+|+++|+++++..++++||+++++++|++|++||++||.++++||++|.++||..+                +.|++
T Consensus       471 iA~V~S~lrl~~i~t~n~~lGPlqISlGrmv~Di~kF~~I~~lvl~aF~iGl~qLy~yy~~~~~~~~~~~~~~~~~~fst  550 (822)
T KOG3609|consen  471 IANVLSFLKLFYIFTMNPSLGPLQISLGRMVGDIYKFLFIFVLVLVAFSIGLNQLYDYYLNRKTMKIDQDYTKTTDSFST  550 (822)
T ss_pred             HHHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHhccchHhhhhcchhhcccccccccccccccc
Confidence            99999999999999999999999999999999999999999999999999999998432                26999


Q ss_pred             hHHHHHHHHHHHhcCcchhhhhccCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhHHHHHHHH
Q psy817          693 PIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKTAGLDKLVRQT  772 (854)
Q Consensus       693 ~~~s~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ilf~~f~~~~~ivLlNlLIA~~~~~~~~v~~~a~~~~~~~~~  772 (854)
                      +..|..++||++||..+..+....   ..+.+.+++|.++|++|.+++.|||+|||||||+++||+|+++||.||++.||
T Consensus       551 i~eS~~tLFWsiFglv~~~~~~l~---~~Hkf~e~ig~~lfG~Y~vi~vIVLLNmLIAMmnnSyQeIeD~ADvEWKFARA  627 (822)
T KOG3609|consen  551 IGESSKTLFWSIFGLVVLGSVVLP---YKHKFTEFIGEVLFGVYNVILIIVLLNLLIAMMSNSYQEIEDDADVEWKFARA  627 (822)
T ss_pred             HHHHHHHHHHHHHhcccccceecc---cchhHHHHHHHHHHHhhheeeHHHHHHHHHHHHHhHHHHHhhcchhHHHHHHH
Confidence            999999999999999886554333   45778899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHH-HHHhhcCCCcHHHH
Q psy817          773 ELIHSL-ELALFQGYLPNRIV  792 (854)
Q Consensus       773 ~~i~~~-e~~l~~~~lp~~~~  792 (854)
                      ++..++ +.   +.++|+||+
T Consensus       628 KLw~syF~e---g~tLPpPFN  645 (822)
T KOG3609|consen  628 KLWMSYFDE---GMALPPPFN  645 (822)
T ss_pred             HHHHHHhcC---CCCCCCCcc
Confidence            996655 55   789999998

>KOG3676|consensus

Probab=100.00  E-value=7.8e-58  Score=495.71  Aligned_cols=514  Identities=20%  Similarity=0.260  Sum_probs=354.1

Q ss_pred             CCCCCCCCCCcHHHHHHH---cCCHHHHHHHHHcCCCCccc---cccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCC-
Q psy817          235 NPNVLNNKGVSPLHIAAD---RGLISCLKAILDSGMADVDI---KTKERRVTALHLAAENGYVECLRILLENHANCNER-  307 (854)
Q Consensus       235 ~~~~~d~~g~t~L~~A~~---~g~~~iv~~Ll~~~~~~~~~---~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-  307 (854)
                      +.+.+..-|.|.||.|.-   .++.++++.|++..+.-+|.   .+...|.||||.|+.+.+.++|++|++.|||++++ 
T Consensus       135 ~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa  214 (782)
T KOG3676|consen  135 KLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARA  214 (782)
T ss_pred             ccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHh
Confidence            344444556666666554   23445556565544222221   12234556666666666666666666666665442 


Q ss_pred             ----------------------CCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHH
Q psy817          308 ----------------------NHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEIL  365 (854)
Q Consensus       308 ----------------------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~L  365 (854)
                                            -..|+.||..||..++.|++++|+++|+|++++|..|+|.||..+...  ..++.+++
T Consensus       215 ~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~--~~~My~~~  292 (782)
T KOG3676|consen  215 CGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHF--VTEMYDLA  292 (782)
T ss_pred             hccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHH--HHHHHHHH
Confidence                                  234789999999999999999999999999999999999999999886  88899999


Q ss_pred             HhCCCC--CccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHHhhhhcCCcccccCC
Q psy817          366 LKWGAN--VNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQDP  443 (854)
Q Consensus       366 l~~g~d--~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~  443 (854)
                      +++|++  ...+|..|.|||.+|+..|+.++.+.+++........=  |  |...+..        -+...|.+-     
T Consensus       293 L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~~k~~~W~Y--G--pvtsslY--------pL~~iDT~~-----  355 (782)
T KOG3676|consen  293 LELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILERRKFTDWAY--G--PVTSSLY--------PLNSIDTIG-----  355 (782)
T ss_pred             HhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHhhcccceee--c--ccccccc--------cchhccccc-----
Confidence            999999  88999999999999999999999999999843322211  1  1111100        011111110     


Q ss_pred             CCCcchhHhhhhhhhhhhcCCCCcchhhHhh---hhcchhhhccChhHHHHHHHHHhhhhHH-HHHHHHHHHHHHHHHHH
Q psy817          444 EASTKDIELKLNFKYILQNGPDGEIGMLKIF---QNDGQKEILEHPLCEAFLYVKWEKMKKF-YLFRLVLSSIFVLVLSV  519 (854)
Q Consensus       444 ~~~~~~~~~~~~~~~l~~~~~~~~~~~L~~~---v~~~~~~ll~Hp~vq~lL~~kW~~~~~~-~~~~~~~~~~f~~~~~~  519 (854)
                                            .+.+.|...   .+.++.+++.+ +++++|+.||.+|++. |+.+++.|++|.+++++
T Consensus       356 ----------------------n~~SvLeivvyg~~~eHl~Ll~~-~i~~LL~~KW~~f~k~~f~~~~~~~~~y~i~ft~  412 (782)
T KOG3676|consen  356 ----------------------NENSVLEIVVYGIKNEHLELLDG-PIEELLEDKWKAFGKKQFFMSLLIYLLYMICFTL  412 (782)
T ss_pred             ----------------------chhhhhhhhhcCCcHHHHHHHhH-HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence                                  111122222   23455566666 8999999999999875 77888888888888876


Q ss_pred             hhhccccccccccCCCcccccCcccccccccccccccCcchhhHHHHHHHHHHHHHHHHHHHhhhh--hhhhhhhhhch-
Q psy817          520 YVLTTLAQDCYNASKNITLFTPTFCTKNSEIGHFLLRNPDFMETVWYVLALLATIELIRKIFGLVE--YASFREYCSHV-  596 (854)
Q Consensus       520 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~--~~~~~~y~~~~-  596 (854)
                      ..+.-+..   ....   ....          ...............+++++.++..+.++..+.+  ......++.+. 
T Consensus       413 ~~y~RP~~---~~~~---~~~~----------~~~~~~~~~r~~~e~~~l~~~~~~~~~~~~~if~~~~~~~~~~~~~~~  476 (782)
T KOG3676|consen  413 AFYYRPAL---EQAK---LLDE----------AYINDYDELRLAGETLTLLGGILFLFCELPDIFLQGLPAYNGQLIDGP  476 (782)
T ss_pred             HHhhcccc---cccc---chhh----------ccccCchhhhhhhhHHHhhhhHhhhhhhhHhHHhcccHHHHHHhhccc
Confidence            66543210   0000   0000          0000001133344455555556656666554321  12233334433 


Q ss_pred             hhHHHHHHHHHHHHHHHhccCcccchhhhHHHHHHHHHHHHHHHHHcccCccchHHHHHHHHHH-HHHHHHHHHHHHHHH
Q psy817          597 TNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQL-EFLKLFQAYICLLVG  675 (854)
Q Consensus       597 wN~~d~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ll~~~~~~~~~G~~v~m~~~~~~-d~~~f~~i~~~~l~a  675 (854)
                      +--+-.+.....++++.+.......|...+++++..++|..+|||+|+++.+|||++|+++|+. |+++|++||++|++|
T Consensus       477 ~~~v~~~~~~~l~l~~~~~~i~~~~~~~~~lvfAl~lgW~~~Lyf~Rgfq~~Gpf~~MIykmI~~DL~RF~~IY~Vfl~G  556 (782)
T KOG3676|consen  477 LFHVLGFLQAVLVLVSPVLRLGAIKWELALLVFALVLGWKNLLYFTRGFQLTGPFVIMIYKMIFGDLFRFLLIYLVFLVG  556 (782)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2222222222233344445556677889999999999999999999999999999999999877 999999999999999


Q ss_pred             HHHHHHHhcCCCC-------------ccCChHHHHHHHHHHHhcCcchhhhhccCCCCCccccchhHHHHHHHHHHHHHH
Q psy817          676 FTLTFCIVFPSED-------------RFQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLFVTV  742 (854)
Q Consensus       676 F~~~f~~l~~~~~-------------~f~~~~~s~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ilf~~f~~~~~i  742 (854)
                      ||+|||.+|.+.+             +..++.++ +.++.|.++++....  .+.+.+....+|+++.++|++|+++++|
T Consensus       557 FsqAfy~if~~~~~~~~~~~~~~~~~~m~~~~ds-~~~~~l~lf~ftig~--~dl~~~~~~~~~~~~kilfv~y~ilv~I  633 (782)
T KOG3676|consen  557 FSQAFYSIFQTCDRDSSPNDKNVESNPMCNPYDS-FSTFLLTLFEFTIGM--GDLEACENTDYPVLFKILFVAYMILVTI  633 (782)
T ss_pred             HHHHHHHHHcCCCcccccccccccccccCChhhH-HHHHHHHHHHHhhhh--hhhhhcccccchHHHHHHHHHHHHHHHH
Confidence            9999999996532             34445565 666666666655442  2333345667889999999999999999


Q ss_pred             HHHHHHHHHHHhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHh--hhccccCCCCc-eeEEEecC
Q psy817          743 VLMNLLVGIAVQDIQGLHKTAGLDKLVRQTELIHSLELALFQGYLPNRIVSML--KSQALLTPSSY-TVALNVKP  814 (854)
Q Consensus       743 vLlNlLIA~~~~~~~~v~~~a~~~~~~~~~~~i~~~e~~l~~~~lp~~~~~~~--~~~~~~~~~~~-~~~~~~~~  814 (854)
                      +|+|||||||++||++|.++++.+|+.|+|+.|+.+|+     .+|++.++..  .++..+.++.. |+.++|+.
T Consensus       634 LllNMLIAMMg~Ty~~Va~~s~~~Wk~Q~A~~iL~lEr-----s~p~~~r~~~~~~y~~~~g~~~d~R~~~~v~~  703 (782)
T KOG3676|consen  634 LLLNMLIAMMGNTYETVAQESEKEWKLQWAATILMLER-----SLPPALRKRFRLGYSRPVGTSGDVRWLLRVEE  703 (782)
T ss_pred             HHHHHHHHHhhhHHHHHHHhHHHHHHHHHHHHHHHHHh-----cCCHHHHHHHhhccceecCCCCceeEEEEEcc
Confidence            99999999999999999999999999999999999999     7899888763  55777777765 77777744

>PHA02946 ankyin-like protein; Provisional

Probab=100.00  E-value=7.1e-43  Score=387.08  Aligned_cols=300  Identities=19%  Similarity=0.209  Sum_probs=247.8

Q ss_pred             cCCcHHHHHHH--cCCHHHHHHHHHcCCCCCC---CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHhC
Q psy817          120 EKTTALLWCVF--VKREDLLDALHQLGADLSN---DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLG  193 (854)
Q Consensus       120 ~~~t~L~~Aa~--~g~~~iv~~Ll~~g~~~~~---~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~  193 (854)
                      .+.++||.++.  .++.++|++|+++|+++|.   +|.||||+||..|+.++|++|+++|+++|..+ +|.||||+|+..
T Consensus        36 g~~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~  115 (446)
T PHA02946         36 GNYHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGT  115 (446)
T ss_pred             CCChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHc
Confidence            34688887664  3467889999999888865   78899999999999999999999998888765 588999988876


Q ss_pred             C--CHHHHHHHHhCCCCC-------CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHH
Q psy817          194 N--YVDCAKFLIKNKAHI-------HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRG--LISCLKAI  262 (854)
Q Consensus       194 ~--~~~iv~~Ll~~~~~~-------~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g--~~~iv~~L  262 (854)
                      +  ..+++++|+++|+++       |.|||| |+..|+.++++.|+++|++++..|..|.||||.|+..+  +.+++++|
T Consensus       116 ~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~L  194 (446)
T PHA02946        116 DDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWM  194 (446)
T ss_pred             CCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHH
Confidence            5  478888899888765       578887 66678888999999889988888888999998887654  46888888


Q ss_pred             HHcCCCCccccccCCcCcHHHHHHHcC--CHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCC-HHHHHHHHhCCCCCCC
Q psy817          263 LDSGMADVDIKTKERRVTALHLAAENG--YVECLRILLENHANCNERNHKEQIPLHLAAKCQS-VECMEMLLRKGSQVNA  339 (854)
Q Consensus       263 l~~~~~~~~~~~~~~~~t~L~~A~~~g--~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~  339 (854)
                      +++| ++++.++ ..|.||||+|+.+|  +.+++++|++ |++++.+|..|.||||+|+..++ .+++++|+++|++.+.
T Consensus       195 l~~G-adin~~d-~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~  271 (446)
T PHA02946        195 MKLG-ISPSKPD-HDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITD  271 (446)
T ss_pred             HHcC-CCCcccC-CCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCC
Confidence            8876 8888766 45669999998876  7788888885 88888888899999999888887 4788888888764321


Q ss_pred             --------------------c-cCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHH
Q psy817          340 --------------------S-DCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCL  398 (854)
Q Consensus       340 --------------------~-~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~L  398 (854)
                                          . +..|.||||+|+..|  +.+++++|+++|+       .|.||||+|+..++.+++++|
T Consensus       272 ~~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g--~~eivk~Ll~~~~-------~~~t~L~~A~~~~~~~~v~~L  342 (446)
T PHA02946        272 QTVNICIFYDRDDVLEIINDKGKQYDSTDFKMAVEVG--SIRCVKYLLDNDI-------ICEDAMYYAVLSEYETMVDYL  342 (446)
T ss_pred             cHHHHHHHcCchHHHHHHHHcCcccCCCHHHHHHHcC--CHHHHHHHHHCCC-------ccccHHHHHHHhCHHHHHHHH
Confidence                                1 235779999999999  8899999999874       478999999999999999999


Q ss_pred             HHcCCCccccCCCCCCHHHHHHhcCCcchHHhhhh
Q psy817          399 IMHGADISSKTPSGSSALSIIMRNTPSSISSVRKK  433 (854)
Q Consensus       399 l~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~  433 (854)
                      +.+|++++.+ ..|.||+++|++.+...+...+..
T Consensus       343 l~~ga~~n~~-~~G~t~l~~a~~~~~~~~~~~ll~  376 (446)
T PHA02946        343 LFNHFSVDSV-VNGHTCMSECVRLNNPVILSKLML  376 (446)
T ss_pred             HHCCCCCCCc-cccccHHHHHHHcCCHHHHHHHHh
Confidence            9999999986 589999999999999888776655

>PHA02876 ankyrin repeat protein; Provisional

Probab=100.00  E-value=7.7e-43  Score=413.12  Aligned_cols=316  Identities=25%  Similarity=0.316  Sum_probs=252.2

Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCCCCCC---CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHhCCCHHH
Q psy817          123 TALLWCVFVKREDLLDALHQLGADLSN---DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGNYVDC  198 (854)
Q Consensus       123 t~L~~Aa~~g~~~iv~~Ll~~g~~~~~---~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~~~~~i  198 (854)
                      ++++.|+..|+.+++++|+++|+++|.   .|.||||+||..|+.++|++|+++|++++..+ +|.||||+|+..|+.++
T Consensus       147 ~~l~~~i~~~~~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~i  226 (682)
T PHA02876        147 KLIKERIQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDT  226 (682)
T ss_pred             HHHHHHHHCCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHH
Confidence            445555677899999999999999976   79999999999999999999999999999765 68999999999999999


Q ss_pred             HHHHHhCCCCC--CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCH-HHHHHHHHcCCCCcccccc
Q psy817          199 AKFLIKNKAHI--HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLI-SCLKAILDSGMADVDIKTK  275 (854)
Q Consensus       199 v~~Ll~~~~~~--~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~-~iv~~Ll~~~~~~~~~~~~  275 (854)
                      +++|++++++.  +.++++.|+..++.+++++|++.|++++..|..|.||||+|+..|+. +++++|++.| ++++.++ 
T Consensus       227 vk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~g-adin~~d-  304 (682)
T PHA02876        227 IKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERG-ADVNAKN-  304 (682)
T ss_pred             HHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCC-CCCCCcC-
Confidence            99999988776  45678888888888888888888888888888888888888888775 5777777765 7777665 


Q ss_pred             CCcCcHHHHHHHcC-CHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhc-CCHHHHHHHHhCCCCCCCccCCCCcHHHHHHh
Q psy817          276 ERRVTALHLAAENG-YVECLRILLENHANCNERNHKEQIPLHLAAKC-QSVECMEMLLRKGSQVNASDCDNRTPLHASLS  353 (854)
Q Consensus       276 ~~~~t~L~~A~~~g-~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~  353 (854)
                      ..|.||||+|+.+| +.++++.|++.|++++..|..|.||||+|+.. ++.++++.|+++|++++.+|..|.||||+|+.
T Consensus       305 ~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~  384 (682)
T PHA02876        305 IKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAV  384 (682)
T ss_pred             CCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHH
Confidence            34568888888887 47788888888888888888888888888764 46777888888888888888888888888888


Q ss_pred             cCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCccccCCCCCCHHHHHHhcC-CcchHHhh
Q psy817          354 KNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSEL-SQCVDCLIMHGADISSKTPSGSSALSIIMRNT-PSSISSVR  431 (854)
Q Consensus       354 ~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~-~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~-~~~~~~~~  431 (854)
                      .+  +.+++++|+++|++++..+..|.||||+|+..++ ..++++|+++|++++.+|..|.|||++|+..+ ..+++.++
T Consensus       385 ~~--~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lL  462 (682)
T PHA02876        385 RN--NVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEML  462 (682)
T ss_pred             cC--CHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHH
Confidence            77  6777888888888888888888888888876655 45678888888888888888888888887755 45666666


Q ss_pred             hhcCCcccccC
Q psy817          432 KKLDSSISLQD  442 (854)
Q Consensus       432 ~~~~~~~~~~~  442 (854)
                      ...+..++..+
T Consensus       463 l~~Gad~n~~d  473 (682)
T PHA02876        463 LDNGADVNAIN  473 (682)
T ss_pred             HHCCCCCCCCC
Confidence            66555544433

>KOG3614|consensus

Probab=100.00  E-value=3.4e-44  Score=405.92  Aligned_cols=243  Identities=15%  Similarity=0.185  Sum_probs=205.6

Q ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhchhhHHHHHHHHHHHHHHHhccCc--ccchhhhHHHHHH
Q psy817          557 NPDFMETVWYVLALLATIELIRKIFGLV---EYASFREYCSHVTNLFEWYMIISVFLISCVYTKR--TYIWQNHVGAVAV  631 (854)
Q Consensus       557 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~---~~~~~~~y~~~~wN~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~  631 (854)
                      .|++.|+..+.|++...++.+|+++---   ..+..+.||.++||.+|.+.++++++....+...  ...+++.++|+.+
T Consensus       820 ~Ps~~Ew~~~~~iftl~~E~vRq~~~se~~~l~~kv~v~f~d~wN~~d~~ai~~F~vG~~~Rl~~~~~~~~GRvIl~~d~  899 (1381)
T KOG3614|consen  820 SPSMWEWILFAWIFTLFLEEVRQIFISESGLLPQKVRVYFADFWNLIDLLAILLFLVGPVLRLLPIDSIYSGRVILCFDF  899 (1381)
T ss_pred             CCCccchhHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHhhhheeEecCccceecceeeeeehH
Confidence            3678888889999999999999987421   1355678999999999999888877755554443  5678999999999


Q ss_pred             HHHHHHHHHHHcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-ccCCh-HHHHHHHHHHHhcCcc
Q psy817          632 LLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSED-RFQNP-IIGFINILVMMTGELN  709 (854)
Q Consensus       632 ~l~~~~ll~~~~~~~~~G~~v~m~~~~~~d~~~f~~i~~~~l~aF~~~f~~l~~~~~-~f~~~-~~s~~~~~~~~~G~~~  709 (854)
                      ++..+||+.|+.+++.+||||+|+.||++|++.|+++++++++|||++-+.+...++ ..-.+ -..++..|+|+|||+-
T Consensus       900 i~~t~rLl~~f~V~~~lGPyI~mv~kMm~dmf~flfllaV~LlsfGVarQaIl~P~e~~~w~l~R~i~y~PYlmifGeV~  979 (1381)
T KOG3614|consen  900 ILFTLRLLHYFTVSKQLGPYIVMVKKMMKDMFFFLFLLAVVLLSFGVARQAILRPDEPRHWWLFRNIFYWPYLMLFGEVP  979 (1381)
T ss_pred             HHHHHHHhhheeeccccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcccc
Confidence            999999999999999999999999999999999999999999999999998765444 33333 3567789999999998


Q ss_pred             hhhhhccC--------------CC--CCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhHHHHHHHHH
Q psy817          710 VNEVLLGT--------------EA--KPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKTAGLDKLVRQTE  773 (854)
Q Consensus       710 ~~~~~~~~--------------~~--~~~~~~~~~~~ilf~~f~~~~~ivLlNlLIA~~~~~~~~v~~~a~~~~~~~~~~  773 (854)
                      .+++....              +.  ....+..|+++++.++|+++.+|+|+||||||++++|+.|+++++..|++||+.
T Consensus       980 a~eID~~~~e~~~~~~p~~~~~s~~~~~c~pg~wl~plLl~~yLLv~nILL~NLLIA~Fn~tf~~v~~~sd~iWkFQRY~ 1059 (1381)
T KOG3614|consen  980 ADEIDTCTCEKSFCGEPLRYESSPGNPSCPPGSWLTPLLLVIYLLVTNILLVNLLIAMFSYTFGNVQENSDQIWKFQRYS 1059 (1381)
T ss_pred             HhhhhhhcccccccCCCcccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            77664332              11  233455699999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcCCCcHHHHHHhhhccccC
Q psy817          774 LIHSLELALFQGYLPNRIVSMLKSQALLT  802 (854)
Q Consensus       774 ~i~~~e~~l~~~~lp~~~~~~~~~~~~~~  802 (854)
                      +|++|+.   +|+|||||+.+.|....+.
T Consensus      1060 limeyh~---rP~LPPPfiilsHi~l~~~ 1085 (1381)
T KOG3614|consen 1060 LIMEYHS---RPALPPPFIILSHIYLLLK 1085 (1381)
T ss_pred             HHHHhhc---CCCCCCCcHHHHHHHHHHH
Confidence            9999999   8999999999988866553

>PHA02876 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2.5e-41  Score=400.26  Aligned_cols=312  Identities=23%  Similarity=0.280  Sum_probs=284.9

Q ss_pred             cccccCCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCccHHHHHHHcCCHHHHHHHHhCCCCccccCCCccHHHHHHh
Q psy817          116 ASQAEKTTALLWCVFVKREDLLDALHQLGADLSN---DKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVL  192 (854)
Q Consensus       116 ~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~---~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~g~t~L~~A~~  192 (854)
                      ..+..|.||||+||..|+.++|++|+++|++++.   +|.||||.|+..|+.+++++|++++.+++   .+.++++.|+.
T Consensus       173 ~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~---~~~~~L~~ai~  249 (682)
T PHA02876        173 AKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNIN---KNDLSLLKAIR  249 (682)
T ss_pred             CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC---CCcHHHHHHHH
Confidence            4567899999999999999999999999999875   89999999999999999999999988765   35689999999


Q ss_pred             CCCHHHHHHHHhCCCCC------CchHHHHHHHcCCH-HHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC-CHHHHHHHHH
Q psy817          193 GNYVDCAKFLIKNKAHI------HETIVHSAVSTNAV-DCVQLLLSLQINPNVLNNKGVSPLHIAADRG-LISCLKAILD  264 (854)
Q Consensus       193 ~~~~~iv~~Ll~~~~~~------~~t~L~~A~~~~~~-~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g-~~~iv~~Ll~  264 (854)
                      +++.+++++|++.|+++      |.||||.|+..|+. ++++.|++.|++++..|..|.||||+|+..| +.++++.|+.
T Consensus       250 ~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~  329 (682)
T PHA02876        250 NEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIM  329 (682)
T ss_pred             cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHH
Confidence            99999999999999876      78999999999996 6999999999999999999999999999999 6999999999


Q ss_pred             cCCCCccccccCCcCcHHHHHHHc-CCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCC
Q psy817          265 SGMADVDIKTKERRVTALHLAAEN-GYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCD  343 (854)
Q Consensus       265 ~~~~~~~~~~~~~~~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~  343 (854)
                      .| ++++..+ ..|.||||+|+.. ++.++++.|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus       330 ~g-adin~~d-~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~  407 (682)
T PHA02876        330 LG-ADVNAAD-RLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQK  407 (682)
T ss_pred             cC-CCCCCcc-cCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCC
Confidence            87 8898776 4667999999985 5789999999999999999999999999999999999999999999999999999


Q ss_pred             CCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcC-CHHHHHHHHHcCCCccccCCCCCCHHHHHHhc
Q psy817          344 NRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSE-LSQCVDCLIMHGADISSKTPSGSSALSIIMRN  422 (854)
Q Consensus       344 g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~-~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~  422 (854)
                      |.||||.|+..+. ...++++|+++|+++|.+|..|.||||+|+..| +.+++++|+++|++++.+|..|.||++.|+..
T Consensus       408 g~T~Lh~A~~~~~-~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g~tpl~~a~~~  486 (682)
T PHA02876        408 IGTALHFALCGTN-PYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIALEY  486 (682)
T ss_pred             CCchHHHHHHcCC-HHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHh
Confidence            9999999997663 456789999999999999999999999999977 68999999999999999999999999999875


Q ss_pred             CCcchHHhhhhcC
Q psy817          423 TPSSISSVRKKLD  435 (854)
Q Consensus       423 ~~~~~~~~~~~~~  435 (854)
                      +  .++..+...+
T Consensus       487 ~--~~v~~Ll~~~  497 (682)
T PHA02876        487 H--GIVNILLHYG  497 (682)
T ss_pred             C--CHHHHHHHCC
Confidence            4  3445554443

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=100.00  E-value=3.2e-41  Score=382.58  Aligned_cols=341  Identities=15%  Similarity=0.149  Sum_probs=270.0

Q ss_pred             cCCChHHHHHH-HcCCCChhHHHHHhhhcc-cccCCcHHHHHHHc--CCHHHHHHHHHcCCCCCC---CCccHHHHHHHc
Q psy817           89 SSGDVNVLYAI-ENSLYEPDEMATLFSKAS-QAEKTTALLWCVFV--KREDLLDALHQLGADLSN---DKYGALHLAAFN  161 (854)
Q Consensus        89 ~~g~~~l~~~~-~~~~~~~~~~~~~~~~~~-~~~~~t~L~~Aa~~--g~~~iv~~Ll~~g~~~~~---~g~t~L~~A~~~  161 (854)
                      ..++..+++.+ +.|..++        +.. +..|.||||+|+.+  |+.+++++|+++|+++|.   +|.||||+|+..
T Consensus       151 ~~v~leiVk~LLe~G~ADI--------N~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~  222 (764)
T PHA02716        151 RGIDLDLIKYMVDVGIVNL--------NYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLIT  222 (764)
T ss_pred             cCCCHHHHHHHHHCCCCCc--------ccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence            45676766654 4432332        233 67799999998754  678999999999999976   899999999999


Q ss_pred             CC--HHHHHHHHhCCCCccccC-CCccHHHHHH---hCCCHHHHHHHHhCCCCCC--c--hHHH---HHHHcCCHHHHHH
Q psy817          162 GS--IKGCSWLMLHGHDINFTK-DSYTPLHFAV---LGNYVDCAKFLIKNKAHIH--E--TIVH---SAVSTNAVDCVQL  228 (854)
Q Consensus       162 g~--~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~---~~~~~~iv~~Ll~~~~~~~--~--t~L~---~A~~~~~~~~v~~  228 (854)
                      |+  .++|++|+++|+|+|..+ +|.||||+|+   .+++.|+++.|++.+...+  .  .+++   .|+..|+.++++.
T Consensus       223 g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVkl  302 (764)
T PHA02716        223 GNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYS  302 (764)
T ss_pred             CCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHH
Confidence            95  599999999999999876 5999999885   5789999999998765432  2  2333   4789999999999


Q ss_pred             HHHCCCCCCCCCCCCCcHHHHHHH--cCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHH--------------cCCHH
Q psy817          229 LLSLQINPNVLNNKGVSPLHIAAD--RGLISCLKAILDSGMADVDIKTKERRVTALHLAAE--------------NGYVE  292 (854)
Q Consensus       229 Ll~~g~~~~~~d~~g~t~L~~A~~--~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~--------------~g~~~  292 (854)
                      |+++|++++.+|..|+||||+|+.  .++.+++++|+++| ++++.++ ..|.||||+|+.              .++.+
T Consensus       303 LLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~G-ADIN~kD-~~G~TPLH~A~~~lav~~~ld~~~~~~~~~e  380 (764)
T PHA02716        303 FLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYG-NDLNEPD-NIGNTVLHTYLSMLSVVNILDPETDNDIRLD  380 (764)
T ss_pred             HHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcC-CCCccCC-CCCCCHHHHHHHhhhhhccccccccccChHH
Confidence            999999999999999999999874  56899999999986 8999876 567899999875              37899


Q ss_pred             HHHHHHhcCCCcCCCCCCCCCHHHH----HHhcCCHHHHHHHHhCCCCCCCcc--------CCCCcH--HHHHHhcCCCC
Q psy817          293 CLRILLENHANCNERNHKEQIPLHL----AAKCQSVECMEMLLRKGSQVNASD--------CDNRTP--LHASLSKNILS  358 (854)
Q Consensus       293 ~v~~Ll~~~~~~~~~~~~g~t~L~~----A~~~~~~~~v~~Ll~~g~~~~~~~--------~~g~t~--L~~a~~~~~~~  358 (854)
                      ++++|+++|++++.+|..|.||||.    |...++.+++++|++.|+.....+        ..+.++  +|.++..+...
T Consensus       381 VVklLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~  460 (764)
T PHA02716        381 VIQCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIP  460 (764)
T ss_pred             HHHHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcc
Confidence            9999999999999999999999994    234578999999999886433221        122333  45555443111


Q ss_pred             ----------------hHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCH-----HHHHHHHHcCCCccccCCCCCCHHH
Q psy817          359 ----------------VHPLEILLKWGANVNARDIFGYSPIHIAALSELS-----QCVDCLIMHGADISSKTPSGSSALS  417 (854)
Q Consensus       359 ----------------~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~-----~~v~~Ll~~ga~~~~~~~~g~t~l~  417 (854)
                                      .++...++..+.++|..|..|+||||+|+..|+.     +++++|+++|+|++.+|.+|.|||+
T Consensus       461 ~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~~G~TPLh  540 (764)
T PHA02716        461 TDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIPTKNGVTPLM  540 (764)
T ss_pred             hhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcccCCCCCCHHH
Confidence                            1233445556778899999999999999999876     4559999999999999999999999


Q ss_pred             HHHhcCCc-----chHHhhhhcCCccc
Q psy817          418 IIMRNTPS-----SISSVRKKLDSSIS  439 (854)
Q Consensus       418 ~a~~~~~~-----~~~~~~~~~~~~~~  439 (854)
                      +|++++..     ++++.+...+..+.
T Consensus       541 ~A~~~g~~~~~~~eIvk~LL~~ga~~~  567 (764)
T PHA02716        541 LTMRNNRLSGHQWYIVKNILDKRPNVD  567 (764)
T ss_pred             HHHHcCCccccHHHHHHHHHhcCCCcc
Confidence            99998865     66676666554444

>PHA02946 ankyin-like protein; Provisional

Probab=100.00  E-value=2.7e-41  Score=374.42  Aligned_cols=276  Identities=15%  Similarity=0.205  Sum_probs=244.4

Q ss_pred             hcccccCCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCccHHHHHHHcC--CHHHHHHHHhCCCCccc--cCCCccHH
Q psy817          115 KASQAEKTTALLWCVFVKREDLLDALHQLGADLSN---DKYGALHLAAFNG--SIKGCSWLMLHGHDINF--TKDSYTPL  187 (854)
Q Consensus       115 ~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~---~g~t~L~~A~~~g--~~~iv~~Ll~~g~~~~~--~~~g~t~L  187 (854)
                      +..+.+|.||||+|+..|+.++|++|+++|+++|.   +|.||||+|+..+  +.+++++|+++|++++.  +.+|.|||
T Consensus        66 n~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL  145 (446)
T PHA02946         66 NETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPL  145 (446)
T ss_pred             CccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHH
Confidence            45678899999999999999999999999999865   8999999999876  48999999999999985  34699999


Q ss_pred             HHHHhCCCHHHHHHHHhCCCCC------CchHHHHHHHcC--CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC--CHH
Q psy817          188 HFAVLGNYVDCAKFLIKNKAHI------HETIVHSAVSTN--AVDCVQLLLSLQINPNVLNNKGVSPLHIAADRG--LIS  257 (854)
Q Consensus       188 ~~A~~~~~~~iv~~Ll~~~~~~------~~t~L~~A~~~~--~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g--~~~  257 (854)
                      | |+..|+.+++++|+++|+++      |.||||.|+..+  +.+++++|+++|++++.+|.+|.||||+|+..|  +.+
T Consensus       146 ~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~  224 (446)
T PHA02946        146 L-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVD  224 (446)
T ss_pred             H-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHH
Confidence            7 67779999999999999876      899999998755  479999999999999999999999999999986  889


Q ss_pred             HHHHHHHcCCCCccccccCCcCcHHHHHHHcCC-HHHHHHHHhcCCCcCC--------------------C-CCCCCCHH
Q psy817          258 CLKAILDSGMADVDIKTKERRVTALHLAAENGY-VECLRILLENHANCNE--------------------R-NHKEQIPL  315 (854)
Q Consensus       258 iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~-~~~v~~Ll~~~~~~~~--------------------~-~~~g~t~L  315 (854)
                      ++++|++  +++++.++ ..|.||||+|+..++ .+++++|+++|++.+.                    . +..|.|||
T Consensus       225 iv~lLl~--gadin~~d-~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~TpL  301 (446)
T PHA02946        225 IINLLLP--STDVNKQN-KFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEIINDKGKQYDSTDF  301 (446)
T ss_pred             HHHHHHc--CCCCCCCC-CCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHHHHHHcCcccCCCHH
Confidence            9999985  48999876 467799999999988 5899999999875321                    1 23578999


Q ss_pred             HHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHH
Q psy817          316 HLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCV  395 (854)
Q Consensus       316 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v  395 (854)
                      |+|+.+|+.+++++|+++|+       .|.||||+|+..+  ..+++++|+.+|+++|.. ..|.||||+|+..++.+++
T Consensus       302 h~Aa~~g~~eivk~Ll~~~~-------~~~t~L~~A~~~~--~~~~v~~Ll~~ga~~n~~-~~G~t~l~~a~~~~~~~~~  371 (446)
T PHA02946        302 KMAVEVGSIRCVKYLLDNDI-------ICEDAMYYAVLSE--YETMVDYLLFNHFSVDSV-VNGHTCMSECVRLNNPVIL  371 (446)
T ss_pred             HHHHHcCCHHHHHHHHHCCC-------ccccHHHHHHHhC--HHHHHHHHHHCCCCCCCc-cccccHHHHHHHcCCHHHH
Confidence            99999999999999999874       4689999999999  788999999999999996 5899999999999999999


Q ss_pred             HHHHHcCCC
Q psy817          396 DCLIMHGAD  404 (854)
Q Consensus       396 ~~Ll~~ga~  404 (854)
                      +.|+.+..+
T Consensus       372 ~~ll~~~~~  380 (446)
T PHA02946        372 SKLMLHNPT  380 (446)
T ss_pred             HHHHhcCcc
Confidence            999996443

>KOG0510|consensus

Probab=100.00  E-value=6.6e-39  Score=345.36  Aligned_cols=321  Identities=25%  Similarity=0.336  Sum_probs=283.9

Q ss_pred             cccccCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHhCC
Q psy817          116 ASQAEKTTALLWCVFVKREDLLDALHQLGADLSNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGN  194 (854)
Q Consensus       116 ~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~~  194 (854)
                      ..+..|.|++|.|+..++. .-+....+  ..|..|.||||+|+.....+.++.|++.|+|++..+ ++.+|+|+|+..|
T Consensus        56 ~~~~~gd~~~~~~~~~~y~-~~~~~~~~--a~D~~~n~~l~~a~~~~~~~~i~~Lls~gad~~~~n~~~~aplh~A~~~~  132 (929)
T KOG0510|consen   56 GKRAFGDTELHHASARNYI-LSKLAISY--AKDSADNTPLHAAVEYNQGDKIQVLLSYGADTPLRNLNKNAPLHLAADSG  132 (929)
T ss_pred             hhhhhchhHHHHHHhhcch-hhhhhhhh--hhhcccCchhHHHhhcchHHHHHHHHhcCCCCChhhhhccCchhhccccc
Confidence            4567899999999998876 11111111  123478999999999999999999999999998776 5899999999999


Q ss_pred             CHHHHHHHHhCCCCC------CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCC-
Q psy817          195 YVDCAKFLIKNKAHI------HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGM-  267 (854)
Q Consensus       195 ~~~iv~~Ll~~~~~~------~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~-  267 (854)
                      +.++.+.|+++|+++      |.||||.|+..++.|..+.|++.|+|+...|.+|++|+|.|+.+|..++.+..+.+.+ 
T Consensus       133 ~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~  212 (929)
T KOG0510|consen  133 NYSCLKLLLDYGADVNLEDENGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGY  212 (929)
T ss_pred             hHHHHHHHHHhcCCccccccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccc
Confidence            999999999999888      6899999999999998899999999999999999999999999999999999998332 


Q ss_pred             ---CCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCC---------------cCCCCCCCCCHHHHHHhcCCHHHHHH
Q psy817          268 ---ADVDIKTKERRVTALHLAAENGYVECLRILLENHAN---------------CNERNHKEQIPLHLAAKCQSVECMEM  329 (854)
Q Consensus       268 ---~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~---------------~~~~~~~g~t~L~~A~~~~~~~~v~~  329 (854)
                         ..+|..+ ..+.||||.|+..|+.++++.+|++|..               ++..|.+|.||||+||+.|+.+.++.
T Consensus       213 ~r~~~in~~~-n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~  291 (929)
T KOG0510|consen  213 ERQTHINFDN-NEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDN  291 (929)
T ss_pred             hhhccccccc-CCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHH
Confidence               5566554 4567999999999999999999998753               35578899999999999999999999


Q ss_pred             HHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHh-CC-CCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-
Q psy817          330 LLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLK-WG-ANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADIS-  406 (854)
Q Consensus       330 Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~-~g-~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-  406 (854)
                      |+..|++++.++.++.||||.|+..|  +.+.++.|++ .| ...|..|..|.||||+|+++||.++++.|+++||... 
T Consensus       292 Ll~~Ga~I~~kn~d~~spLH~AA~yg--~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~  369 (929)
T KOG0510|consen  292 LLGFGASINSKNKDEESPLHFAAIYG--RINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLN  369 (929)
T ss_pred             HHHcCCcccccCCCCCCchHHHHHcc--cHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhc
Confidence            99999999999999999999999999  8888999998 54 3578889999999999999999999999999999887 


Q ss_pred             --ccCCCCCCHHHHHHhcCCcchHHhhhhcCCcccccC
Q psy817          407 --SKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQD  442 (854)
Q Consensus       407 --~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~  442 (854)
                        ..|.+|.||||.|+..+....+..+...+..+...+
T Consensus       370 ~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n  407 (929)
T KOG0510|consen  370 MSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKN  407 (929)
T ss_pred             ccccccCCchhhhHHHHhccHHHHHHHHHcCCceeecc
Confidence              459999999999999999999999988888875433

>PHA02874 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.5e-40  Score=372.66  Aligned_cols=291  Identities=25%  Similarity=0.399  Sum_probs=265.9

Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCCC-CC---CCCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHhCCCHH
Q psy817          123 TALLWCVFVKREDLLDALHQLGAD-LS---NDKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGNYVD  197 (854)
Q Consensus       123 t~L~~Aa~~g~~~iv~~Ll~~g~~-~~---~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~~~~~  197 (854)
                      ..|..|+..|+.+.++.|++.+.. ++   .+|.||||.|+..|+.++|++|+++|++++..+ .|.||||.|+..|+.+
T Consensus         3 ~~l~~ai~~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~   82 (434)
T PHA02874          3 QDLRMCIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHD   82 (434)
T ss_pred             HHHHHHHhcCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence            368899999999999999976443 43   389999999999999999999999999998765 5899999999999999


Q ss_pred             HHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCC
Q psy817          198 CAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKER  277 (854)
Q Consensus       198 iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~  277 (854)
                      ++++|+++|++....    +....+.++++.|++.|++++.+|..|.||||+|+..|+.+++++|+++| ++++.++ ..
T Consensus        83 iv~~Ll~~g~~~~~~----~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~g-ad~n~~d-~~  156 (434)
T PHA02874         83 IIKLLIDNGVDTSIL----PIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYG-ADVNIED-DN  156 (434)
T ss_pred             HHHHHHHCCCCCCcc----hhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCC-CCCCCcC-CC
Confidence            999999999986433    34456789999999999999999999999999999999999999999986 8898876 46


Q ss_pred             cCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCC
Q psy817          278 RVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNIL  357 (854)
Q Consensus       278 ~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~  357 (854)
                      |.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||.|+..+. 
T Consensus       157 g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~-  235 (434)
T PHA02874        157 GCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR-  235 (434)
T ss_pred             CCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCCh-
Confidence            7799999999999999999999999999999999999999999999999999999999999999999999999998763 


Q ss_pred             ChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcC-CHHHHHHHHHcCCCccccCCCCCCHHHHHHhcC
Q psy817          358 SVHPLEILLKWGANVNARDIFGYSPIHIAALSE-LSQCVDCLIMHGADISSKTPSGSSALSIIMRNT  423 (854)
Q Consensus       358 ~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~-~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~  423 (854)
                        +.+++|+ .|+++|.+|..|.||||+|+..+ +.+++++|+++|++++.+|..|.||++.|++..
T Consensus       236 --~~i~~Ll-~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~d~~g~TpL~~A~~~~  299 (434)
T PHA02874        236 --SAIELLI-NNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDNKGENPIDTAFKYI  299 (434)
T ss_pred             --HHHHHHH-cCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhC
Confidence              4566666 68999999999999999999876 789999999999999999999999999999876

>PHA02730 ankyrin-like protein; Provisional

Probab=100.00  E-value=2.6e-40  Score=367.63  Aligned_cols=346  Identities=14%  Similarity=0.121  Sum_probs=274.2

Q ss_pred             cCCChHHHHHHHcCCC-ChhHHHHHhh-----hcccccCCcHHHHHHHcC--CHHHHHHHHHcCCCC--CC---CCccHH
Q psy817           89 SSGDVNVLYAIENSLY-EPDEMATLFS-----KASQAEKTTALLWCVFVK--REDLLDALHQLGADL--SN---DKYGAL  155 (854)
Q Consensus        89 ~~g~~~l~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~t~L~~Aa~~g--~~~iv~~Ll~~g~~~--~~---~g~t~L  155 (854)
                      ..|.++|++|+.+|+. ..+.++.++.     +..|..|.||||+|+..|  +.|+|++|+++|+++  +.   .+.+||
T Consensus        39 ~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d~~l  118 (672)
T PHA02730         39 RRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNINDFDL  118 (672)
T ss_pred             CCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCCchH
Confidence            3455555555555431 2233333333     356788999999999976  799999999997765  42   488999


Q ss_pred             HHHHH--cCCHHHHHHHHh-CCCCcccc------CCCccHHHHHHhCCCHHHHHHHHhCCCCCC--------------ch
Q psy817          156 HLAAF--NGSIKGCSWLML-HGHDINFT------KDSYTPLHFAVLGNYVDCAKFLIKNKAHIH--------------ET  212 (854)
Q Consensus       156 ~~A~~--~g~~~iv~~Ll~-~g~~~~~~------~~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~--------------~t  212 (854)
                      |.++.  +++.++|++|++ .|+|++..      ..|.+|++.|...++.|+|++|+++|+++.              .|
T Consensus       119 ~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~c~~  198 (672)
T PHA02730        119 YSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDRCKN  198 (672)
T ss_pred             HHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccccccCCccch
Confidence            99988  999999999997 67887754      247999999999999999999999999881              24


Q ss_pred             HHHHH------HHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH--HHHcCCHHHHHHHHH--------------------
Q psy817          213 IVHSA------VSTNAVDCVQLLLSLQINPNVLNNKGVSPLHI--AADRGLISCLKAILD--------------------  264 (854)
Q Consensus       213 ~L~~A------~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~--A~~~g~~~iv~~Ll~--------------------  264 (854)
                      .||++      ..+++.|++++|+++|+|+|.+|.+|.||||+  |...|+.|++++|++                    
T Consensus       199 ~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~  278 (672)
T PHA02730        199 SLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVL  278 (672)
T ss_pred             hHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhH
Confidence            45533      45688999999999999999999999999995  555678999999999                    


Q ss_pred             ------------cCCCCccc-------------------cccCCcCc---------------------HHHHHHHcC---
Q psy817          265 ------------SGMADVDI-------------------KTKERRVT---------------------ALHLAAENG---  289 (854)
Q Consensus       265 ------------~~~~~~~~-------------------~~~~~~~t---------------------~L~~A~~~g---  289 (854)
                                  + ++|...                   .-+..|.+                     .||.-.+.+   
T Consensus       279 ~~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v  357 (672)
T PHA02730        279 ADYLNKRFRVTPY-NVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMV  357 (672)
T ss_pred             HHhhhhhhhcccC-CcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcC
Confidence                        3 355433                   01122322                     566666655   


Q ss_pred             CHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCC----HHHHHHHHhCCC--CCCCccCCCCcHHHH---HHhcCC----
Q psy817          290 YVECLRILLENHANCNERNHKEQIPLHLAAKCQS----VECMEMLLRKGS--QVNASDCDNRTPLHA---SLSKNI----  356 (854)
Q Consensus       290 ~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~g~--~~~~~~~~g~t~L~~---a~~~~~----  356 (854)
                      +.+++++|+++|++++.. ..|.||||+|+..++    .+++++|+++|+  ++|..|..|.||||.   |...+.    
T Consensus       358 ~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~  436 (672)
T PHA02730        358 SIPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHC  436 (672)
T ss_pred             cHHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccc
Confidence            689999999999999985 799999999998875    899999999998  689999999999994   332221    


Q ss_pred             ---CChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC-CCCCHHHHHHhc--CCcchHHh
Q psy817          357 ---LSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTP-SGSSALSIIMRN--TPSSISSV  430 (854)
Q Consensus       357 ---~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~a~~~--~~~~~~~~  430 (854)
                         ...+++++|+++|+|+|.+|..|.||||+|+..++.+++++|+++||+++.++. .|.||++.|+..  +..+++.+
T Consensus       437 ~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~  516 (672)
T PHA02730        437 YETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDL  516 (672)
T ss_pred             cchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHH
Confidence               023569999999999999999999999999999999999999999999999997 599999999864  56667666


Q ss_pred             hhhcCC
Q psy817          431 RKKLDS  436 (854)
Q Consensus       431 ~~~~~~  436 (854)
                      +...+.
T Consensus       517 LLs~ga  522 (672)
T PHA02730        517 LLSYHP  522 (672)
T ss_pred             HHHcCC
Confidence            655543

>PHA02730 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.7e-39  Score=361.15  Aligned_cols=325  Identities=13%  Similarity=0.118  Sum_probs=269.2

Q ss_pred             cccccCCcHHHHHHHcC---CHHHHHHHHHcCCCCCC---CCccHHHHHHHcC--CHHHHHHHHhCCCCc--cccC-CCc
Q psy817          116 ASQAEKTTALLWCVFVK---REDLLDALHQLGADLSN---DKYGALHLAAFNG--SIKGCSWLMLHGHDI--NFTK-DSY  184 (854)
Q Consensus       116 ~~~~~~~t~L~~Aa~~g---~~~iv~~Ll~~g~~~~~---~g~t~L~~A~~~g--~~~iv~~Ll~~g~~~--~~~~-~g~  184 (854)
                      ..|..|+||||+|+.+|   +.|+|++|+++||+++.   +|+||||+|+.+|  +.|+|++|+++|++.  +..+ .+.
T Consensus        36 ~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d  115 (672)
T PHA02730         36 HIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNIND  115 (672)
T ss_pred             hcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCC
Confidence            45678999999999997   59999999999999975   8999999999977  799999999997655  5333 388


Q ss_pred             cHHHHHHh--CCCHHHHHHHHh-CCCC-----------CCchHHHHHHHcCCHHHHHHHHHCCCCCC-------CCCCCC
Q psy817          185 TPLHFAVL--GNYVDCAKFLIK-NKAH-----------IHETIVHSAVSTNAVDCVQLLLSLQINPN-------VLNNKG  243 (854)
Q Consensus       185 t~L~~A~~--~~~~~iv~~Ll~-~~~~-----------~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~d~~g  243 (854)
                      +||+.++.  +++.+++++|++ .+.+           .|.+|+++|..++++++|++|+++|++++       ..+..+
T Consensus       116 ~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~  195 (672)
T PHA02730        116 FDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDR  195 (672)
T ss_pred             chHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccccccCCc
Confidence            99998888  999999999996 4433           35789999999999999999999999995       244455


Q ss_pred             CcH-HHHH------HHcCCHHHHHHHHHcCCCCccccccCCcCcHHHH--HHHcCCHHHHHHHHh---------------
Q psy817          244 VSP-LHIA------ADRGLISCLKAILDSGMADVDIKTKERRVTALHL--AAENGYVECLRILLE---------------  299 (854)
Q Consensus       244 ~t~-L~~A------~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~--A~~~g~~~~v~~Ll~---------------  299 (854)
                      ++| ||++      ..+++.|++++|+++| +++|.++. .|.||||+  |...|+.|+|++|++               
T Consensus       196 c~~~l~~~il~~~~~~~n~~eiv~lLIs~G-adIN~kd~-~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~  273 (672)
T PHA02730        196 CKNSLHYYILSHRESESLSKDVIKCLIDNN-VSIHGRDE-GGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPY  273 (672)
T ss_pred             cchhHHHHHHhhhhhhccCHHHHHHHHHCC-CCCCCCCC-CCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchh
Confidence            554 4533      4567999999999998 99998875 67799995  556678999999999               


Q ss_pred             -----------------cCCCcCC--------------------CCCCCCC---------------------HHHHHHhc
Q psy817          300 -----------------NHANCNE--------------------RNHKEQI---------------------PLHLAAKC  321 (854)
Q Consensus       300 -----------------~~~~~~~--------------------~~~~g~t---------------------~L~~A~~~  321 (854)
                                       +|+|...                    .+..|.+                     .|+.-.+.
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~  353 (672)
T PHA02730        274 IRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHY  353 (672)
T ss_pred             hhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhc
Confidence                             6777543                    4556654                     56655564


Q ss_pred             C---CHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCC--CChHHHHHHHhCCC--CCccCCCCCCCHHHH---HHHcC-
Q psy817          322 Q---SVECMEMLLRKGSQVNASDCDNRTPLHASLSKNI--LSVHPLEILLKWGA--NVNARDIFGYSPIHI---AALSE-  390 (854)
Q Consensus       322 ~---~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~--~~~~~v~~Ll~~g~--d~n~~d~~g~t~L~~---A~~~~-  390 (854)
                      +   +.+++++|+++|+++|.. ..|.||||.|+..+.  .+.+++++|+++|+  ++|.+|..|.||||.   |...+ 
T Consensus       354 ~~~v~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~  432 (672)
T PHA02730        354 GDMVSIPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNC  432 (672)
T ss_pred             CCcCcHHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccc
Confidence            5   699999999999999985 799999999988873  24899999999998  699999999999984   33332 


Q ss_pred             --------CHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHHhhhhcCCcccccCC
Q psy817          391 --------LSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQDP  443 (854)
Q Consensus       391 --------~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~  443 (854)
                              ..+++++|+++|+|++.+|..|.|||++|+..+..+++.++...++.+...+.
T Consensus       433 ~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~  493 (672)
T PHA02730        433 GYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSR  493 (672)
T ss_pred             cccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCC
Confidence                    23579999999999999999999999999999999999998888877665554

>PHA02874 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2.1e-39  Score=363.35  Aligned_cols=325  Identities=22%  Similarity=0.314  Sum_probs=275.4

Q ss_pred             cCCChHHHHHHH-cCCCChhHHHHHhhhcccccCCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCccHHHHHHHcCCH
Q psy817           89 SSGDVNVLYAIE-NSLYEPDEMATLFSKASQAEKTTALLWCVFVKREDLLDALHQLGADLSN---DKYGALHLAAFNGSI  164 (854)
Q Consensus        89 ~~g~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~---~g~t~L~~A~~~g~~  164 (854)
                      ..|+..+++.+. ++....        +..+..|.||||.|+..|+.++|++|+++|+++|.   .|.||||.|+..|+.
T Consensus        10 ~~gd~~~v~~ll~~~~~~~--------n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~   81 (434)
T PHA02874         10 YSGDIEAIEKIIKNKGNCI--------NISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAH   81 (434)
T ss_pred             hcCCHHHHHHHHHcCCCCC--------CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH
Confidence            566766665543 222211        23456789999999999999999999999999865   789999999999999


Q ss_pred             HHHHHHHhCCCCccccCCCccHHHHHHhCCCHHHHHHHHhCCCCC------CchHHHHHHHcCCHHHHHHHHHCCCCCCC
Q psy817          165 KGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHI------HETIVHSAVSTNAVDCVQLLLSLQINPNV  238 (854)
Q Consensus       165 ~iv~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~~~~~------~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~  238 (854)
                      +++++|+++|++++..         +....+.++++.|++.|+++      |.||||.|+..|+.++|++|+++|++++.
T Consensus        82 ~iv~~Ll~~g~~~~~~---------~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~  152 (434)
T PHA02874         82 DIIKLLIDNGVDTSIL---------PIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNI  152 (434)
T ss_pred             HHHHHHHHCCCCCCcc---------hhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCC
Confidence            9999999999986532         23445789999999999876      78999999999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHH
Q psy817          239 LNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLA  318 (854)
Q Consensus       239 ~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A  318 (854)
                      .|..|.||||+|+..|+.+++++|+++| ++++..+ ..|.||||+|+..|+.+++++|+++|++++.++..|.||||.|
T Consensus       153 ~d~~g~tpLh~A~~~~~~~iv~~Ll~~g-~~~n~~~-~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A  230 (434)
T PHA02874        153 EDDNGCYPIHIAIKHNFFDIIKLLLEKG-AYANVKD-NNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNA  230 (434)
T ss_pred             cCCCCCCHHHHHHHCCcHHHHHHHHHCC-CCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHH
Confidence            9999999999999999999999999987 8888765 4577999999999999999999999999999999999999999


Q ss_pred             HhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcC-CHHHHHH
Q psy817          319 AKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSE-LSQCVDC  397 (854)
Q Consensus       319 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~-~~~~v~~  397 (854)
                      +..++ +.+++|+ .|++++..|..|+||||+|+..+. +.+++++|+++|+|++.+|..|.||||+|+..+ ..++++.
T Consensus       231 ~~~~~-~~i~~Ll-~~~~in~~d~~G~TpLh~A~~~~~-~~~iv~~Ll~~gad~n~~d~~g~TpL~~A~~~~~~~~~ik~  307 (434)
T PHA02874        231 IIHNR-SAIELLI-NNASINDQDIDGSTPLHHAINPPC-DIDIIDILLYHKADISIKDNKGENPIDTAFKYINKDPVIKD  307 (434)
T ss_pred             HHCCh-HHHHHHH-cCCCCCCcCCCCCCHHHHHHhcCC-cHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCccHHHHH
Confidence            98765 5667666 689999999999999999998653 578899999999999999999999999999987 7789999


Q ss_pred             HHHcCCCccccCCCC-CCHHHHHHhcCCcchHHhhhhcC
Q psy817          398 LIMHGADISSKTPSG-SSALSIIMRNTPSSISSVRKKLD  435 (854)
Q Consensus       398 Ll~~ga~~~~~~~~g-~t~l~~a~~~~~~~~~~~~~~~~  435 (854)
                      |+.+++.....+..+ .+++..+.......+..+...+.
T Consensus       308 ll~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~c~  346 (434)
T PHA02874        308 IIANAVLIKEADKLKDSDFLEHIEIKDNKEFSDFIKECN  346 (434)
T ss_pred             HHHhcCchhhccccchhHHHHHHHHhccchHHHHHHHHH
Confidence            999998776555444 44566555555555555554433

>PHA02917 ankyrin-like protein; Provisional

Probab=100.00  E-value=2.9e-39  Score=370.97  Aligned_cols=142  Identities=17%  Similarity=0.180  Sum_probs=104.0

Q ss_pred             HHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHh-CCCCCCCccCCCCcHHHHHHhcCCC-------------
Q psy817          292 ECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLR-KGSQVNASDCDNRTPLHASLSKNIL-------------  357 (854)
Q Consensus       292 ~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~a~~~~~~-------------  357 (854)
                      +++++|+++|++++.++..|.++.    .+.+.++++.|+. .|++++..+.+|.||||.|++.+..             
T Consensus       347 ~~v~~Ll~~GAdvn~~~~~g~~~~----~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~  422 (661)
T PHA02917        347 PLVECMLEYGAVVNKEAIHGYFRN----INIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGL  422 (661)
T ss_pred             HHHHHHHHcCCCCCCCCccccchh----hcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhcc
Confidence            356666666666665555555532    2445555555554 4555555566799999988754321             


Q ss_pred             --------ChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHh-cCCcchH
Q psy817          358 --------SVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMR-NTPSSIS  428 (854)
Q Consensus       358 --------~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~~~~  428 (854)
                              ..++++.|+++|+|+|.+|..|.||||+|+..++.+++++|+++|++++.+|..|.|||++|.. ....++.
T Consensus       423 ~~~~~~~~~~~~v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~~~~~~~iv  502 (661)
T PHA02917        423 CDMSYACPILSTINICLPYLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIELL  502 (661)
T ss_pred             chhhhhhhhHHHHHHHHHCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCCHHHH
Confidence                    3457899999999999999999999999999999999999999999999999999999999985 5566666


Q ss_pred             HhhhhcCCc
Q psy817          429 SVRKKLDSS  437 (854)
Q Consensus       429 ~~~~~~~~~  437 (854)
                      .++......
T Consensus       503 ~~LL~~ga~  511 (661)
T PHA02917        503 KMLLCHKPT  511 (661)
T ss_pred             HHHHHcCCC
Confidence            666555443

>PHA03095 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.9e-39  Score=369.90  Aligned_cols=279  Identities=24%  Similarity=0.284  Sum_probs=253.0

Q ss_pred             HHHHHcCCHHHHHHHHHcCCCCCC---CCccHHHHHHHcC---CHHHHHHHHhCCCCccccC-CCccHHHHHHhCC-CHH
Q psy817          126 LWCVFVKREDLLDALHQLGADLSN---DKYGALHLAAFNG---SIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGN-YVD  197 (854)
Q Consensus       126 ~~Aa~~g~~~iv~~Ll~~g~~~~~---~g~t~L~~A~~~g---~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~~-~~~  197 (854)
                      ..|+..++.++|++|+++|+++|.   .|.||||+|+..|   +.+++++|+++|+|+|..+ +|.||||+|+..| +.+
T Consensus        19 ~~~~~~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~   98 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLD   98 (471)
T ss_pred             HHcCCCCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHH
Confidence            556778899999999999999976   7899999999999   9999999999999999876 5999999999999 599


Q ss_pred             HHHHHHhCCCCC------CchHHHHHH--HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHHcCC
Q psy817          198 CAKFLIKNKAHI------HETIVHSAV--STNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRG--LISCLKAILDSGM  267 (854)
Q Consensus       198 iv~~Ll~~~~~~------~~t~L~~A~--~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g--~~~iv~~Ll~~~~  267 (854)
                      ++++|+++|+++      |.||||.|+  ..++.+++++|+++|++++..|..|.||||.|+..+  +.+++++|+++| 
T Consensus        99 iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g-  177 (471)
T PHA03095         99 VIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAG-  177 (471)
T ss_pred             HHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcC-
Confidence            999999999987      789999999  566899999999999999999999999999998876  689999999987 


Q ss_pred             CCccccccCCcCcHHHHHHHc--CCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCH--HHHHHHHhCCCCCCCccCC
Q psy817          268 ADVDIKTKERRVTALHLAAEN--GYVECLRILLENHANCNERNHKEQIPLHLAAKCQSV--ECMEMLLRKGSQVNASDCD  343 (854)
Q Consensus       268 ~~~~~~~~~~~~t~L~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~~~~~  343 (854)
                      ++++.. +..|.||||+|+..  ++.++++.|+++|++++.+|..|.||||+|+..|+.  .+++.|+++|+++|..|..
T Consensus       178 ~~~~~~-d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~  256 (471)
T PHA03095        178 ADVYAV-DDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRY  256 (471)
T ss_pred             CCCccc-CCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCC
Confidence            777777 56778999999875  778999999999999999999999999999998875  5888999999999999999


Q ss_pred             CCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc
Q psy817          344 NRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSK  408 (854)
Q Consensus       344 g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~  408 (854)
                      |+||||+|+..|  +.+++++|+++|+|++.+|..|.||||+|+..|+.++++.|++++++++..
T Consensus       257 g~TpLh~A~~~~--~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~~~  319 (471)
T PHA03095        257 GQTPLHYAAVFN--NPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAETV  319 (471)
T ss_pred             CCCHHHHHHHcC--CHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHHHH
Confidence            999999999998  778899999999999999999999999999999999999999999887643

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=100.00  E-value=8e-39  Score=363.11  Aligned_cols=313  Identities=18%  Similarity=0.203  Sum_probs=248.3

Q ss_pred             HcCCHHHHHHHHHcC-CCCCC----CCccHHHHHHH--cCCHHHHHHHHhCCCCccccC-CCccHHHHHHhCCC--HHHH
Q psy817          130 FVKREDLLDALHQLG-ADLSN----DKYGALHLAAF--NGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGNY--VDCA  199 (854)
Q Consensus       130 ~~g~~~iv~~Ll~~g-~~~~~----~g~t~L~~A~~--~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~~~--~~iv  199 (854)
                      +.++.+++++|+++| +++|.    .|.||||.|+.  .++.+++++|+++|+++|..+ +|.||||+|+..|+  .+++
T Consensus       151 ~~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIV  230 (764)
T PHA02716        151 RGIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVI  230 (764)
T ss_pred             cCCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHH
Confidence            468999999999999 88864    69999999875  468999999999999999876 59999999999995  5999


Q ss_pred             HHHHhCCCCC------CchHHHHHH---HcCCHHHHHHHHHCCCCCCCCCCCCCcHHH---HHHHcCCHHHHHHHHHcCC
Q psy817          200 KFLIKNKAHI------HETIVHSAV---STNAVDCVQLLLSLQINPNVLNNKGVSPLH---IAADRGLISCLKAILDSGM  267 (854)
Q Consensus       200 ~~Ll~~~~~~------~~t~L~~A~---~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~---~A~~~g~~~iv~~Ll~~~~  267 (854)
                      ++|+++|+++      |.||||.|+   .+++.++++.|++.+......  ...++++   .|+..|+.++++.|+++| 
T Consensus       231 klLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~--~~~~~L~~~i~AA~~g~leiVklLLe~G-  307 (764)
T PHA02716        231 KKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVK--NIPMILHSYITLARNIDISVVYSFLQPG-  307 (764)
T ss_pred             HHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccc--cchhhhHHHHHHHHcCCHHHHHHHHhCC-
Confidence            9999999987      789999885   568999999999875332211  1223343   478999999999999986 


Q ss_pred             CCccccccCCcCcHHHHHHH--cCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHh--------------cCCHHHHHHHH
Q psy817          268 ADVDIKTKERRVTALHLAAE--NGYVECLRILLENHANCNERNHKEQIPLHLAAK--------------CQSVECMEMLL  331 (854)
Q Consensus       268 ~~~~~~~~~~~~t~L~~A~~--~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~--------------~~~~~~v~~Ll  331 (854)
                      ++++.++ ..|.||||+|+.  .++.+++++|+++|++++.+|..|.||||.|+.              .++.+++++|+
T Consensus       308 AdIN~kD-~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL  386 (764)
T PHA02716        308 VKLHYKD-SAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLI  386 (764)
T ss_pred             CceeccC-CCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHH
Confidence            8999876 467799999864  468999999999999999999999999999875              37899999999


Q ss_pred             hCCCCCCCccCCCCcHHHHH-Hh-cCCCChHHHHHHHhCCCCCccCC--------CCCCCH--HHHHHHcCCH-------
Q psy817          332 RKGSQVNASDCDNRTPLHAS-LS-KNILSVHPLEILLKWGANVNARD--------IFGYSP--IHIAALSELS-------  392 (854)
Q Consensus       332 ~~g~~~~~~~~~g~t~L~~a-~~-~~~~~~~~v~~Ll~~g~d~n~~d--------~~g~t~--L~~A~~~~~~-------  392 (854)
                      ++|++++..|..|.||||.+ +. ......+++++|++.|+..+..+        ..+.+|  +|.++..++.       
T Consensus       387 ~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~  466 (764)
T PHA02716        387 SLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTD  466 (764)
T ss_pred             HCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhh
Confidence            99999999999999999942 22 12236789999999887543222        123333  4555544332       


Q ss_pred             -----------HHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchH-----HhhhhcCCcccccCCCCC
Q psy817          393 -----------QCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSIS-----SVRKKLDSSISLQDPEAS  446 (854)
Q Consensus       393 -----------~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~-----~~~~~~~~~~~~~~~~~~  446 (854)
                                 +++..++..+.+++.+|..|.||||+|+..+.....     +++...+..++..+....
T Consensus       467 ~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~~G~  536 (764)
T PHA02716        467 EYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIPTKNGV  536 (764)
T ss_pred             hhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcccCCCCC
Confidence                       344455566788899999999999999998877544     777778887777665443

>PHA03100 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.2e-38  Score=363.93  Aligned_cols=273  Identities=28%  Similarity=0.399  Sum_probs=241.7

Q ss_pred             CHHHHHHHHHcCCCCC---CCCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHH-----HHhCCCHHHHHHHH
Q psy817          133 REDLLDALHQLGADLS---NDKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHF-----AVLGNYVDCAKFLI  203 (854)
Q Consensus       133 ~~~iv~~Ll~~g~~~~---~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~-----A~~~~~~~iv~~Ll  203 (854)
                      ..++++++++.+...+   ..+.||||.|+..|+.++|++|+++|++++..+ +|.||||.     |+..|+.+++++|+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll   93 (480)
T PHA03100         14 KVKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLL   93 (480)
T ss_pred             HHHHHHHHHhcCccchhhhcccchhhhhhhccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHH
Confidence            4566777776653332   277888888888888888888888888887655 47888888     88888888888888


Q ss_pred             hCCCCC------CchHHHHHH--HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCcccc
Q psy817          204 KNKAHI------HETIVHSAV--STNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRG--LISCLKAILDSGMADVDIK  273 (854)
Q Consensus       204 ~~~~~~------~~t~L~~A~--~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g--~~~iv~~Ll~~~~~~~~~~  273 (854)
                      ++|+++      |.||||.|+  ..|+.+++++|+++|++++..+..|.||||.|+..|  +.+++++|+++| ++++.+
T Consensus        94 ~~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g-~din~~  172 (480)
T PHA03100         94 EYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKG-VDINAK  172 (480)
T ss_pred             HCCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCC-CCcccc
Confidence            888875      688899888  889999999999999999999999999999999999  999999999987 888877


Q ss_pred             ccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCC------CCHHHHHHhcCC--HHHHHHHHhCCCCCCCccCCCC
Q psy817          274 TKERRVTALHLAAENGYVECLRILLENHANCNERNHKE------QIPLHLAAKCQS--VECMEMLLRKGSQVNASDCDNR  345 (854)
Q Consensus       274 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g------~t~L~~A~~~~~--~~~v~~Ll~~g~~~~~~~~~g~  345 (854)
                      +. .|.||||+|+..|+.+++++|+++|++++..+..|      .||||.|+..|+  .+++++|+++|++++.+|..|.
T Consensus       173 d~-~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~  251 (480)
T PHA03100        173 NR-YGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGF  251 (480)
T ss_pred             cC-CCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCC
Confidence            65 67799999999999999999999999999998888      899999999999  9999999999999999999999


Q ss_pred             cHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccC
Q psy817          346 TPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKT  409 (854)
Q Consensus       346 t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~  409 (854)
                      ||||.|+..+  +.+++++|+++|+|+|.+|..|.||+++|+..++.+++++|+++|++++..+
T Consensus       252 TpL~~A~~~~--~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i~~i~  313 (480)
T PHA03100        252 TPLHYAVYNN--NPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKTII  313 (480)
T ss_pred             CHHHHHHHcC--CHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCCHHHHH
Confidence            9999999999  7889999999999999999999999999999999999999999999877543

>PHA02917 ankyrin-like protein; Provisional

Probab=100.00  E-value=5.6e-38  Score=360.38  Aligned_cols=347  Identities=16%  Similarity=0.114  Sum_probs=266.9

Q ss_pred             hcCCChHHHHHHHcCCC-ChhHHHHHhh-----hcccccCCcHHHHHHHcCCHH----HHHHHHHcCCCCCC-CCccHHH
Q psy817           88 MSSGDVNVLYAIENSLY-EPDEMATLFS-----KASQAEKTTALLWCVFVKRED----LLDALHQLGADLSN-DKYGALH  156 (854)
Q Consensus        88 ~~~g~~~l~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~t~L~~Aa~~g~~~----iv~~Ll~~g~~~~~-~g~t~L~  156 (854)
                      +..|.++|+.|..+++. ..+.+..++.     +..+..|.||||+|+..|+.+    +++.|++.+..+|. +..+++|
T Consensus        29 d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~~~~~~  108 (661)
T PHA02917         29 NQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDFNIFSY  108 (661)
T ss_pred             CCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCcchHHH
Confidence            66788999987666431 2234444444     334567889999999999854    56788877543444 3346778


Q ss_pred             HHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHH--hCCCHHHHHHHHhCCCCCC--------------------chH
Q psy817          157 LAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAV--LGNYVDCAKFLIKNKAHIH--------------------ETI  213 (854)
Q Consensus       157 ~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~--~~~~~~iv~~Ll~~~~~~~--------------------~t~  213 (854)
                      .|+.+|+.++|++|+++|+|+|..+ +|.||||.|+  .+|+.+++++|+++|++++                    .||
T Consensus       109 ~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~  188 (661)
T PHA02917        109 MKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTV  188 (661)
T ss_pred             HHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccccccH
Confidence            8889999999999999999999876 6999999543  5789999999999999762                    499


Q ss_pred             HHHHHH-----------cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCH--HHHHHHHHcCCCCccc---cccCC
Q psy817          214 VHSAVS-----------TNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLI--SCLKAILDSGMADVDI---KTKER  277 (854)
Q Consensus       214 L~~A~~-----------~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~--~iv~~Ll~~~~~~~~~---~~~~~  277 (854)
                      ||+|+.           .++.++|++|+++|+|+|..|.+|.||||+|+.+|+.  ++|+.|++ | ++++.   ..+..
T Consensus       189 L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g-~d~~~~~~~~~~~  266 (661)
T PHA02917        189 LHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-G-IDNTAYSYIDDLT  266 (661)
T ss_pred             HHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-C-CcccccccccCcc
Confidence            999986           4689999999999999999999999999999999985  79999975 4 55542   12334


Q ss_pred             cCcHHHHHHH-------c--CCHHHHHHHHhcCCCcCC-------CCC------------CCCCHHHH---HHhcCC--H
Q psy817          278 RVTALHLAAE-------N--GYVECLRILLENHANCNE-------RNH------------KEQIPLHL---AAKCQS--V  324 (854)
Q Consensus       278 ~~t~L~~A~~-------~--g~~~~v~~Ll~~~~~~~~-------~~~------------~g~t~L~~---A~~~~~--~  324 (854)
                      +.+|+++|+.       +  .+.++++.|+++|++...       .+.            .+.+++|.   |+..|.  .
T Consensus       267 ~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~  346 (661)
T PHA02917        267 CCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWRNDKETISLILKTMNSDVLQHILIEYMTFGDIDI  346 (661)
T ss_pred             cccchHHHHHHHhhccccccchHHHHHHHHhCCCCCceeEeeecccccchHHHHHHHHHhchHHHHHHHHHHHHcCCCcH
Confidence            5688888883       1  278999999999986321       111            23344443   334665  5


Q ss_pred             HHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHh-CCCCCccCCCCCCCHHHHHHHcC-------------
Q psy817          325 ECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLK-WGANVNARDIFGYSPIHIAALSE-------------  390 (854)
Q Consensus       325 ~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~-~g~d~n~~d~~g~t~L~~A~~~~-------------  390 (854)
                      +++++|+++|+++|.++..|.++.    ...  +.++++.|+. .|++++..+..|.||||.|++.+             
T Consensus       347 ~~v~~Ll~~GAdvn~~~~~g~~~~----~~~--~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~  420 (661)
T PHA02917        347 PLVECMLEYGAVVNKEAIHGYFRN----INI--DSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKK  420 (661)
T ss_pred             HHHHHHHHcCCCCCCCCccccchh----hcC--CHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhh
Confidence            699999999999999998898854    222  5667888886 68888777778999999987543             


Q ss_pred             ----------CHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHHhhhhcCCcccccC
Q psy817          391 ----------LSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQD  442 (854)
Q Consensus       391 ----------~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~  442 (854)
                                ..+++++|+++|+|++.+|..|.|||++|+..+..++...+...+..++..+
T Consensus       421 ~~~~~~~~~~~~~~v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d  482 (661)
T PHA02917        421 GLCDMSYACPILSTINICLPYLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRS  482 (661)
T ss_pred             ccchhhhhhhhHHHHHHHHHCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCC
Confidence                      3567899999999999999999999999999998888888877776665444

>PHA03095 ankyrin-like protein; Provisional

Probab=100.00  E-value=4.1e-38  Score=358.89  Aligned_cols=278  Identities=26%  Similarity=0.345  Sum_probs=257.8

Q ss_pred             HHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHhCC---CHHHHHHHHhCCCCC------CchHHHHHHHcC-CHH
Q psy817          156 HLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGN---YVDCAKFLIKNKAHI------HETIVHSAVSTN-AVD  224 (854)
Q Consensus       156 ~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~~---~~~iv~~Ll~~~~~~------~~t~L~~A~~~~-~~~  224 (854)
                      ..|+..++.++|++|+++|+++|..+ .|.||||+|+..+   +.+++++|+++|+++      |.||||+|+..| +.+
T Consensus        19 ~~~~~~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~   98 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLD   98 (471)
T ss_pred             HHcCCCCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHH
Confidence            56777889999999999999999876 4899999999998   999999999999987      799999999999 599


Q ss_pred             HHHHHHHCCCCCCCCCCCCCcHHHHHH--HcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcC--CHHHHHHHHhc
Q psy817          225 CVQLLLSLQINPNVLNNKGVSPLHIAA--DRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENG--YVECLRILLEN  300 (854)
Q Consensus       225 ~v~~Ll~~g~~~~~~d~~g~t~L~~A~--~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g--~~~~v~~Ll~~  300 (854)
                      ++++|+++|++++..|..|.||||+|+  .+++.+++++|+++| ++++..+ ..|.||||+|+..+  +.+++++|+++
T Consensus        99 iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~g-ad~~~~d-~~g~tpL~~a~~~~~~~~~iv~~Ll~~  176 (471)
T PHA03095         99 VIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKG-ADVNALD-LYGMTPLAVLLKSRNANVELLRLLIDA  176 (471)
T ss_pred             HHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcC-CCCCccC-CCCCCHHHHHHHcCCCCHHHHHHHHHc
Confidence            999999999999999999999999999  567899999999987 8898776 45679999999876  68999999999


Q ss_pred             CCCcCCCCCCCCCHHHHHHhc--CCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCC
Q psy817          301 HANCNERNHKEQIPLHLAAKC--QSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIF  378 (854)
Q Consensus       301 ~~~~~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~  378 (854)
                      |++++..+..|.||||.|+..  ++.++++.|+++|++++..|..|+||||.|+..+.....+++.|++.|+++|.+|..
T Consensus       177 g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~  256 (471)
T PHA03095        177 GADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRY  256 (471)
T ss_pred             CCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCC
Confidence            999999999999999999865  788999999999999999999999999999999976667899999999999999999


Q ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHHhhhhcC
Q psy817          379 GYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLD  435 (854)
Q Consensus       379 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~  435 (854)
                      |.||||+|+..|+.+++++|+++|+|++.+|..|.||++.|+.+++.+++..+....
T Consensus       257 g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~  313 (471)
T PHA03095        257 GQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKN  313 (471)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhC
Confidence            999999999999999999999999999999999999999999999998887765544

>PHA02878 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2.7e-38  Score=358.55  Aligned_cols=296  Identities=21%  Similarity=0.272  Sum_probs=254.0

Q ss_pred             cccCCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCccHHHHHHHcCCHHHHHHHHhCCCCccccCCCccHHHHHHhCC
Q psy817          118 QAEKTTALLWCVFVKREDLLDALHQLGADLSN---DKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGN  194 (854)
Q Consensus       118 ~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~---~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~g~t~L~~A~~~~  194 (854)
                      ...+.||||+||..|+.++|++|+++|+++|.   +|.||||+||..|+.++++.|++.+.+.+. ..+.+|++.|+..|
T Consensus        34 ~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~-~~~~~~l~~a~~~~  112 (477)
T PHA02878         34 SLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSV-FYTLVAIKDAFNNR  112 (477)
T ss_pred             cccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhcccc-ccchhhHHHHHHcC
Confidence            34578999999999999999999999999875   899999999999999999999999876654 45789999999999


Q ss_pred             CHHHHHHHHhCCCCCCch----HHHHHHHcC--CHHHHHHHHHCCCCCCCCCCC-CCcHHHHHHHcCCHHHHHHHHHcCC
Q psy817          195 YVDCAKFLIKNKAHIHET----IVHSAVSTN--AVDCVQLLLSLQINPNVLNNK-GVSPLHIAADRGLISCLKAILDSGM  267 (854)
Q Consensus       195 ~~~iv~~Ll~~~~~~~~t----~L~~A~~~~--~~~~v~~Ll~~g~~~~~~d~~-g~t~L~~A~~~g~~~iv~~Ll~~~~  267 (854)
                      +.+++++|+..+.+...+    .+..+...+  +.+++++|+++|++++..+.. |.||||+|+.+|+.+++++|+++| 
T Consensus       113 ~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~g-  191 (477)
T PHA02878        113 NVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYG-  191 (477)
T ss_pred             CHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCC-
Confidence            999999999986554221    121111222  356999999999999999999 999999999999999999999987 


Q ss_pred             CCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhc-CCHHHHHHHHhCCCCCCCccC-CCC
Q psy817          268 ADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKC-QSVECMEMLLRKGSQVNASDC-DNR  345 (854)
Q Consensus       268 ~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~~~-~g~  345 (854)
                      ++++..+ ..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+.. ++.+++++|+++|++++..+. .|.
T Consensus       192 ad~n~~d-~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~  270 (477)
T PHA02878        192 ANVNIPD-KTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGL  270 (477)
T ss_pred             CCCCCcC-CCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCC
Confidence            8898776 4577999999999999999999999999999999999999999975 799999999999999999886 799


Q ss_pred             cHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcC-CHHHHHHHHHc-----CCCccccCCCCCCHHHHH
Q psy817          346 TPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSE-LSQCVDCLIMH-----GADISSKTPSGSSALSII  419 (854)
Q Consensus       346 t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~-~~~~v~~Ll~~-----ga~~~~~~~~g~t~l~~a  419 (854)
                      ||||.|+  +  +.+++++|+++|+|+|..|..|.||||+|+..+ ..++++.|+.+     +.+++.++..|..+-..+
T Consensus       271 TpLh~A~--~--~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~g~~~n~~~  346 (477)
T PHA02878        271 TALHSSI--K--SERKLKLLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILISNICLLKRIKPDIKNSEGFIDNMDC  346 (477)
T ss_pred             CHHHHHc--c--CHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHcCccchHHHHHHHHHHHHhccCcccCcHHHHHHHHH
Confidence            9999994  3  567899999999999999999999999999854 56778877765     456777777776554333


Q ss_pred             H
Q psy817          420 M  420 (854)
Q Consensus       420 ~  420 (854)
                      +
T Consensus       347 i  347 (477)
T PHA02878        347 I  347 (477)
T ss_pred             H
Confidence            3

>PHA02989 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.8e-37  Score=352.83  Aligned_cols=268  Identities=21%  Similarity=0.241  Sum_probs=169.3

Q ss_pred             cCCHHHHHHHHHcCCCCCC--CCccHHHHHHHc--CCHHHHHHHHhCCCCccccCCCccHHHHHHhCC------CHHHHH
Q psy817          131 VKREDLLDALHQLGADLSN--DKYGALHLAAFN--GSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGN------YVDCAK  200 (854)
Q Consensus       131 ~g~~~iv~~Ll~~g~~~~~--~g~t~L~~A~~~--g~~~iv~~Ll~~g~~~~~~~~g~t~L~~A~~~~------~~~iv~  200 (854)
                      ..+.++|++|+++|+++|.  +|.||||.++..  ++.++|++|+++|+|+|..+.+.||||.|+.++      +.++++
T Consensus        13 ~~~~~~v~~LL~~GadvN~~~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~~~~tpL~~a~~~~~~~~~~~~~iv~   92 (494)
T PHA02989         13 TVDKNALEFLLRTGFDVNEEYRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKGYIETPLCAVLRNREITSNKIKKIVK   92 (494)
T ss_pred             cCcHHHHHHHHHcCCCcccccCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCCCCCCcHHHHHhccCcchhhHHHHHH
Confidence            4678999999999999986  689999876654  378999999999999998777899999988764      345666


Q ss_pred             HHHhCCCCC------CchHHHHHHHc---CCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHc--CCHHHHHHHHHcCCC
Q psy817          201 FLIKNKAHI------HETIVHSAVST---NAVDCVQLLLSLQINP-NVLNNKGVSPLHIAADR--GLISCLKAILDSGMA  268 (854)
Q Consensus       201 ~Ll~~~~~~------~~t~L~~A~~~---~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~--g~~~iv~~Ll~~~~~  268 (854)
                      +|+++|+++      |.||||.|+..   |+.+++++|+++|+|+ +..|..|.||||+|+..  ++.+++++|+++| +
T Consensus        93 ~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~G-a  171 (494)
T PHA02989         93 LLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFG-V  171 (494)
T ss_pred             HHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcC-C
Confidence            666666554      45566655443   4456666666666666 55555666666655443  3556666666554 5


Q ss_pred             CccccccCCcCcHHHHHHHcC----CHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhc------CCHHHHHHHHhCCCCCC
Q psy817          269 DVDIKTKERRVTALHLAAENG----YVECLRILLENHANCNERNHKEQIPLHLAAKC------QSVECMEMLLRKGSQVN  338 (854)
Q Consensus       269 ~~~~~~~~~~~t~L~~A~~~g----~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~------~~~~~v~~Ll~~g~~~~  338 (854)
                      +++...+..|.||||.|+.++    +.+++++|+++|++++..+..|.||+|.++..      +..+++++|++ |+++|
T Consensus       172 di~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~advn  250 (494)
T PHA02989        172 NLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK-YIKIN  250 (494)
T ss_pred             CccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh-CCCCC
Confidence            555433344556666555442    55666666666666665555556666554432      23445554433 45666


Q ss_pred             CccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q psy817          339 ASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHG  402 (854)
Q Consensus       339 ~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g  402 (854)
                      .+|..|.||||+|+..+  +.+++++|+++|+|+|.+|..|.||||+|+..|+.++++.|++++
T Consensus       251 ~~d~~G~TpL~~Aa~~~--~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~  312 (494)
T PHA02989        251 KKDKKGFNPLLISAKVD--NYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLK  312 (494)
T ss_pred             CCCCCCCCHHHHHHHhc--CHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence            66666666666666555  455566666666666666666666666666666666666666554

>PHA02878 ankyrin repeat protein; Provisional

Probab=100.00  E-value=3.3e-37  Score=349.73  Aligned_cols=269  Identities=25%  Similarity=0.304  Sum_probs=237.1

Q ss_pred             CCCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHhCCCHHHHHHHHhCCCCC----CchHHHHHHHcCCH
Q psy817          149 NDKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGNYVDCAKFLIKNKAHI----HETIVHSAVSTNAV  223 (854)
Q Consensus       149 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~~~~~iv~~Ll~~~~~~----~~t~L~~A~~~~~~  223 (854)
                      ..+.||||.|+..|+.++|++|+++|+++|..+ +|.||||+|+..|+.++++.|++.+...    +.++++.|+..++.
T Consensus        35 ~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~~  114 (477)
T PHA02878         35 LIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRNV  114 (477)
T ss_pred             ccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCCH
Confidence            378999999999999999999999999999876 6999999999999999999999987654    67899999999999


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCcHHHHHHHc--CCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcC
Q psy817          224 DCVQLLLSLQINPNVLNNKGVSPLHIAADR--GLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENH  301 (854)
Q Consensus       224 ~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~--g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~  301 (854)
                      ++++.|+..+.+.+....  ...+..+...  .+.+++++|+++| ++++..+...|.||||+|+.+|+.+++++|+++|
T Consensus       115 ei~~~Ll~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~Ll~~g-adin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~g  191 (477)
T PHA02878        115 EIFKIILTNRYKNIQTID--LVYIDKKSKDDIIEAEITKLLLSYG-ADINMKDRHKGNTALHYATENKDQRLTELLLSYG  191 (477)
T ss_pred             HHHHHHHhCcccCcccCc--HHHHhhccchhhHHHHHHHHHHHcC-CCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCC
Confidence            999999988654332111  1111111122  2356999999987 9999888766889999999999999999999999


Q ss_pred             CCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCC-CCC
Q psy817          302 ANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDI-FGY  380 (854)
Q Consensus       302 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~-~g~  380 (854)
                      ++++..|..|.||||.|+..|+.+++++|+++|++++..|..|.||||+|+..+. +.+++++|+++|+++|.++. .|.
T Consensus       192 ad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~-~~~iv~~Ll~~gadvn~~~~~~g~  270 (477)
T PHA02878        192 ANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCK-DYDILKLLLEHGVDVNAKSYILGL  270 (477)
T ss_pred             CCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcC-CHHHHHHHHHcCCCCCccCCCCCC
Confidence            9999999999999999999999999999999999999999999999999997632 78899999999999999886 799


Q ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcC
Q psy817          381 SPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNT  423 (854)
Q Consensus       381 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~  423 (854)
                      ||||+|  .++.+++++|+++|+|++.+|..|.|||+.|+...
T Consensus       271 TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~~  311 (477)
T PHA02878        271 TALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQY  311 (477)
T ss_pred             CHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHc
Confidence            999999  57889999999999999999999999999998753

>PHA03100 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2.5e-37  Score=353.12  Aligned_cols=258  Identities=26%  Similarity=0.377  Sum_probs=242.3

Q ss_pred             cccccCCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCccHHHH-----HHHcCCHHHHHHHHhCCCCccccC-CCccH
Q psy817          116 ASQAEKTTALLWCVFVKREDLLDALHQLGADLSN---DKYGALHL-----AAFNGSIKGCSWLMLHGHDINFTK-DSYTP  186 (854)
Q Consensus       116 ~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~---~g~t~L~~-----A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~  186 (854)
                      ..+..+.||||.|+..|+.++|++|+++|++++.   .|.||||+     |+..|+.+++++|+++|++++..+ .|.||
T Consensus        30 ~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~tp  109 (480)
T PHA03100         30 YSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITP  109 (480)
T ss_pred             hhhcccchhhhhhhccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCCCch
Confidence            3466789999999999999999999999999875   78899999     999999999999999999998766 59999


Q ss_pred             HHHHH--hCCCHHHHHHHHhCCCCC------CchHHHHHHHcC--CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCH
Q psy817          187 LHFAV--LGNYVDCAKFLIKNKAHI------HETIVHSAVSTN--AVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLI  256 (854)
Q Consensus       187 L~~A~--~~~~~~iv~~Ll~~~~~~------~~t~L~~A~~~~--~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~  256 (854)
                      ||+|+  ..|+.+++++|+++|++.      |.||||.|+..|  +.+++++|+++|++++..|..|.||||+|+..|+.
T Consensus       110 L~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~  189 (480)
T PHA03100        110 LLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNI  189 (480)
T ss_pred             hhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCH
Confidence            99999  999999999999999887      789999999999  99999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCccccccCCc-----CcHHHHHHHcCC--HHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHH
Q psy817          257 SCLKAILDSGMADVDIKTKERR-----VTALHLAAENGY--VECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEM  329 (854)
Q Consensus       257 ~iv~~Ll~~~~~~~~~~~~~~~-----~t~L~~A~~~g~--~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~  329 (854)
                      +++++|+++| ++++..+..+.     .||||.|+..|+  .+++++|+++|++++.+|..|.||||+|+..|+.+++++
T Consensus       190 ~iv~~Ll~~g-a~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~  268 (480)
T PHA03100        190 DVIKFLLDNG-ADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKY  268 (480)
T ss_pred             HHHHHHHHcC-CCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence            9999999987 88887654432     699999999999  999999999999999999999999999999999999999


Q ss_pred             HHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCC
Q psy817          330 LLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARD  376 (854)
Q Consensus       330 Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d  376 (854)
                      |+++|++++..|..|.||+|.|+..+  ..+++++|+++|++++..+
T Consensus       269 Ll~~gad~n~~d~~g~tpl~~A~~~~--~~~iv~~Ll~~g~~i~~i~  313 (480)
T PHA03100        269 LLDLGANPNLVNKYGDTPLHIAILNN--NKEIFKLLLNNGPSIKTII  313 (480)
T ss_pred             HHHcCCCCCccCCCCCcHHHHHHHhC--CHHHHHHHHhcCCCHHHHH
Confidence            99999999999999999999999998  7889999999999887644

>KOG4177|consensus

Probab=100.00  E-value=2.7e-38  Score=363.78  Aligned_cols=320  Identities=33%  Similarity=0.469  Sum_probs=236.0

Q ss_pred             hcccccCCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHH
Q psy817          115 KASQAEKTTALLWCVFVKREDLLDALHQLGADLSN---DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFA  190 (854)
Q Consensus       115 ~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~---~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A  190 (854)
                      ++.|..|-+|||.|+..|+.+++++|+.+|+.+|.   .|.||+|.||..+..+++++|+++|+++.... +..||+|.|
T Consensus       236 ~a~d~~gl~~lh~a~~~g~~~i~~~l~~~ga~~~~~~vr~~tplh~AA~~~~~e~~~~ll~~ga~~~~~~~~~kt~l~~a  315 (1143)
T KOG4177|consen  236 SAKDESGLTPLHVAAFMGHLDIVKLLLQHGASVNVSTVRGETPLHMAARAGQVEVCKLLLQNGADVLAKARDDQTPLHIA  315 (1143)
T ss_pred             CcccccCccHHHHHHhccchhHHHHHHhcccccCcccccccCcchhhhccchhhhHhhhhccCcccccccccccChhhhh
Confidence            45667777888888888888888888888887765   77888888888888888888888888776433 345555555


Q ss_pred             HhCCCHHHHHHHHhCCCCC---------------------------------------CchHHHHHHHcCCHHHHHHHHH
Q psy817          191 VLGNYVDCAKFLIKNKAHI---------------------------------------HETIVHSAVSTNAVDCVQLLLS  231 (854)
Q Consensus       191 ~~~~~~~iv~~Ll~~~~~~---------------------------------------~~t~L~~A~~~~~~~~v~~Ll~  231 (854)
                      ...|+.++++++++.++..                                       +.+|+|.|+..|..+++++++.
T Consensus       316 ~~~g~~~i~~~~l~~~~~~~aar~~g~t~lHlaa~~~~~~~~~~l~~~~~~~~~a~~k~~~pl~la~~~g~~~~v~Lll~  395 (1143)
T KOG4177|consen  316 SRLGHEEIVHLLLQAGATPNAARTAGYTPLHLAAKEGQVEVAGALLEHGAQRRQAEEKGFTPLHLAVKSGRVSVVELLLE  395 (1143)
T ss_pred             cccchHHHHHHHhhccCCccccCcCCcccccHhhhhhhHHHHHHhhccccccCcccccCCcchhhhcccCchhHHHhhhh
Confidence            5555555555555444332                                       5678888888888888888888


Q ss_pred             CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccccc---------------------------------CCc
Q psy817          232 LQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTK---------------------------------ERR  278 (854)
Q Consensus       232 ~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~---------------------------------~~~  278 (854)
                      +|+++|..+..|.||||.|+..++.++++.+++++ ++.+..+.                                 ..|
T Consensus       396 ~ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~g-A~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G  474 (1143)
T KOG4177|consen  396 AGADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRG-ASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQG  474 (1143)
T ss_pred             ccCCcccCCCCCcceeeehhhccCcceEEEEeccC-CChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhcccc
Confidence            88887777766666666666666666666666554 55554432                                 233


Q ss_pred             CcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCC
Q psy817          279 VTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILS  358 (854)
Q Consensus       279 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~  358 (854)
                      .||||.|+..|+.++++.|++.++..+.....|.+++|.|...+...+++.++++|++++.++..|.||||.|+.+|  +
T Consensus       475 ~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g--~  552 (1143)
T KOG4177|consen  475 FTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYG--N  552 (1143)
T ss_pred             CcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcC--C
Confidence            44444444445555555555444444444444555555555555555566666677778888889999999999999  7


Q ss_pred             hHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHHhhhhcCCc
Q psy817          359 VHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSS  437 (854)
Q Consensus       359 ~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~  437 (854)
                      +.+|++|+++|+|++.+++.|+||||.||..|+.+|+++|+++|+++|..|.+|.|||++|++.+..+++..+......
T Consensus       553 v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~  631 (1143)
T KOG4177|consen  553 VDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTAT  631 (1143)
T ss_pred             chHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCc
Confidence            7889999999999999999999999999999999999999999999999999999999999999999988887766554

>PHA02989 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2.9e-36  Score=342.94  Aligned_cols=271  Identities=22%  Similarity=0.318  Sum_probs=238.5

Q ss_pred             cCCHHHHHHHHhCCCCccccCCCccHHHHHHhC--CCHHHHHHHHhCCCCC-----CchHHHHHHHcC------CHHHHH
Q psy817          161 NGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLG--NYVDCAKFLIKNKAHI-----HETIVHSAVSTN------AVDCVQ  227 (854)
Q Consensus       161 ~g~~~iv~~Ll~~g~~~~~~~~g~t~L~~A~~~--~~~~iv~~Ll~~~~~~-----~~t~L~~A~~~~------~~~~v~  227 (854)
                      ..+.++|++|+++|+|+|...+|.||||.++..  ++.+++++|+++|+++     +.||||.|+.++      +.++++
T Consensus        13 ~~~~~~v~~LL~~GadvN~~~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~~~~tpL~~a~~~~~~~~~~~~~iv~   92 (494)
T PHA02989         13 TVDKNALEFLLRTGFDVNEEYRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKGYIETPLCAVLRNREITSNKIKKIVK   92 (494)
T ss_pred             cCcHHHHHHHHHcCCCcccccCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCCCCCCcHHHHHhccCcchhhHHHHHH
Confidence            478999999999999999887799999765543  4799999999999987     579999998754      578999


Q ss_pred             HHHHCCCCCCCCCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCc-cccccCCcCcHHHHHHHc--CCHHHHHHHHhcC
Q psy817          228 LLLSLQINPNVLNNKGVSPLHIAADR---GLISCLKAILDSGMADV-DIKTKERRVTALHLAAEN--GYVECLRILLENH  301 (854)
Q Consensus       228 ~Ll~~g~~~~~~d~~g~t~L~~A~~~---g~~~iv~~Ll~~~~~~~-~~~~~~~~~t~L~~A~~~--g~~~~v~~Ll~~~  301 (854)
                      +|+++|+|+|.+|..|.||||.|+.+   |+.+++++|+++| +++ +.++ ..|.||||+|+..  ++.+++++|+++|
T Consensus        93 ~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~G-adin~~~d-~~g~tpLh~a~~~~~~~~~iv~~Ll~~G  170 (494)
T PHA02989         93 LLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKG-INVNDVKN-SRGYNLLHMYLESFSVKKDVIKILLSFG  170 (494)
T ss_pred             HHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCC-CCcccccC-CCCCCHHHHHHHhccCCHHHHHHHHHcC
Confidence            99999999999999999999988765   6899999999987 899 5544 5678999998764  6899999999999


Q ss_pred             CCcCC-CCCCCCCHHHHHHhcC----CHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCC----CChHHHHHHHhCCCCC
Q psy817          302 ANCNE-RNHKEQIPLHLAAKCQ----SVECMEMLLRKGSQVNASDCDNRTPLHASLSKNI----LSVHPLEILLKWGANV  372 (854)
Q Consensus       302 ~~~~~-~~~~g~t~L~~A~~~~----~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~----~~~~~v~~Ll~~g~d~  372 (854)
                      ++++. .+..|.||||.|+..+    +.+++++|+++|++++..+..|.|++|.++..+.    ...++++++.+ |+++
T Consensus       171 adi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~adv  249 (494)
T PHA02989        171 VNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK-YIKI  249 (494)
T ss_pred             CCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh-CCCC
Confidence            99998 6889999999998664    8999999999999999999999999998776531    24667776654 7999


Q ss_pred             ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHHhhhhc
Q psy817          373 NARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKL  434 (854)
Q Consensus       373 n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~  434 (854)
                      |.+|..|.||||+|+..|+.+++++|+++|+|++.+|..|.|||++|+++++.+++..+...
T Consensus       250 n~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~  311 (494)
T PHA02989        250 NKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQL  311 (494)
T ss_pred             CCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999998887665443

>PHA02791 ankyrin-like protein; Provisional

Probab=100.00  E-value=4.7e-36  Score=308.83  Aligned_cols=235  Identities=18%  Similarity=0.173  Sum_probs=168.7

Q ss_pred             cCCHHHHHHHHHcCCCC-CCCCccHHHHHHHcCCHHHHHHHHhCCCCccccCCCccHHHHHHhCCCHHHHHHHHhCCCCC
Q psy817          131 VKREDLLDALHQLGADL-SNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHI  209 (854)
Q Consensus       131 ~g~~~iv~~Ll~~g~~~-~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~~~~~  209 (854)
                      .++.+++++|+++|++. |.+|.||||+|+..|+.++++.|+++|++++.. +|.||||+|+..|               
T Consensus         9 ~~~~~~~~~Lis~~a~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~-d~~TpLh~Aa~~g---------------   72 (284)
T PHA02791          9 WKSKQLKSFLSSKDAFKADVHGHSALYYAIADNNVRLVCTLLNAGALKNLL-ENEFPLHQAATLE---------------   72 (284)
T ss_pred             cCHHHHHHHHHhCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCC-CCCCHHHHHHHCC---------------
Confidence            35677788888877765 447888888888888888888888888777643 3456666555555               


Q ss_pred             CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcC
Q psy817          210 HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENG  289 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g  289 (854)
                                  +.++++.|+++|++++..|..|.||||+|+..|+.+++++|++++ ++++.++..++.||||+|+..|
T Consensus        73 ------------~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~g-adin~~~~~g~~TpL~~Aa~~g  139 (284)
T PHA02791         73 ------------DTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKN-WRLMFYGKTGWKTSFYHAVMLN  139 (284)
T ss_pred             ------------CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCcCccCCCCCcHHHHHHHHcC
Confidence                        455555555556667777777778888888878888888777775 6776655444457788888888


Q ss_pred             CHHHHHHHHhcCCCcCCCC-CCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcH-HHHHHhcCCCChHHHHHHHh
Q psy817          290 YVECLRILLENHANCNERN-HKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTP-LHASLSKNILSVHPLEILLK  367 (854)
Q Consensus       290 ~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~-L~~a~~~~~~~~~~v~~Ll~  367 (854)
                      +.+++++|++++++.  .| ..|.||||+|+..|+.+++++|+++|++++..|..|.|| ||.|+..|  +.+++++|++
T Consensus       140 ~~eivk~LL~~~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~--~~e~v~lLl~  215 (284)
T PHA02791        140 DVSIVSYFLSEIPST--FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNK--DLEMLQALFK  215 (284)
T ss_pred             CHHHHHHHHhcCCcc--cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcC--CHHHHHHHHH
Confidence            888888877776543  12 246788888888888888888888888877777777766 78888877  6777888888


Q ss_pred             CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Q psy817          368 WGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADI  405 (854)
Q Consensus       368 ~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~  405 (854)
                      +|+++|.+|..| |||      ++.|++++|+++.++.
T Consensus       216 ~Ga~in~~~~~~-~~l------~~~e~~~~ll~~~~~~  246 (284)
T PHA02791        216 YDINIYSVNLEN-VLL------DDAEIAKMIIEKHVEY  246 (284)
T ss_pred             CCCCCccCcccC-ccC------CCHHHHHHHHHhhhhh
Confidence            888888777743 555      7778888888876654

>PHA02791 ankyrin-like protein; Provisional

Probab=100.00  E-value=4e-36  Score=309.34  Aligned_cols=219  Identities=19%  Similarity=0.214  Sum_probs=168.5

Q ss_pred             hcccccCCcHHHHHHHcCCHHHHHHHHHcCCCCCC-CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHh
Q psy817          115 KASQAEKTTALLWCVFVKREDLLDALHQLGADLSN-DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVL  192 (854)
Q Consensus       115 ~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~-~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~  192 (854)
                      +..|.+|.||||+|+..|+.+++++|+++|++++. +|.||||+|+..|+.+++++|+++|++++..+ +|.||||+|+.
T Consensus        24 ~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~  103 (284)
T PHA02791         24 FKADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLENEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVD  103 (284)
T ss_pred             CCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence            45678899999999999999999999999999876 78999999999999999999999999998765 47888888877


Q ss_pred             CCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC-CcHHHHHHHcCCHHHHHHHHHcCCCCcc
Q psy817          193 GNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKG-VSPLHIAADRGLISCLKAILDSGMADVD  271 (854)
Q Consensus       193 ~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g-~t~L~~A~~~g~~~iv~~Ll~~~~~~~~  271 (854)
                      .|+.+++++|+++                           |++++..+..| .||||+|+..|+.+++++|+++++...+
T Consensus       104 ~g~~eivk~Ll~~---------------------------gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d  156 (284)
T PHA02791        104 SGNMQTVKLFVKK---------------------------NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD  156 (284)
T ss_pred             cCCHHHHHHHHHC---------------------------CCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcccc
Confidence            7766666666555                           55556666666 3677777777777777777776522211


Q ss_pred             ccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCH-HHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHH
Q psy817          272 IKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIP-LHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHA  350 (854)
Q Consensus       272 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~  350 (854)
                         ...|.||||+|+.+|+.+++++|+++|++++.+|..|.|| ||+|+..|+.+++++|+++|+++|..|..| ++|  
T Consensus       157 ---~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~~-~~l--  230 (284)
T PHA02791        157 ---LAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNLEN-VLL--  230 (284)
T ss_pred             ---cccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcccC-ccC--
Confidence               1235678888888888888888887777777777777766 777888888888888888787777777743 555  


Q ss_pred             HHhcCCCChHHHHHHHhCCCCC
Q psy817          351 SLSKNILSVHPLEILLKWGANV  372 (854)
Q Consensus       351 a~~~~~~~~~~v~~Ll~~g~d~  372 (854)
                          +  ..|++++|+++.++.
T Consensus       231 ----~--~~e~~~~ll~~~~~~  246 (284)
T PHA02791        231 ----D--DAEIAKMIIEKHVEY  246 (284)
T ss_pred             ----C--CHHHHHHHHHhhhhh
Confidence                2  566777777776554

>KOG0508|consensus

Probab=100.00  E-value=1.1e-36  Score=308.23  Aligned_cols=204  Identities=25%  Similarity=0.321  Sum_probs=175.4

Q ss_pred             CCChHHHHHHHcCCCChhHHHHHhhhcccccCCcHHHHHHHcCCHHHHHHHHH-cCCCCCC-----------CCccHHHH
Q psy817           90 SGDVNVLYAIENSLYEPDEMATLFSKASQAEKTTALLWCVFVKREDLLDALHQ-LGADLSN-----------DKYGALHL  157 (854)
Q Consensus        90 ~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~-~g~~~~~-----------~g~t~L~~  157 (854)
                      .|.+.....+..+..+ .++..++.  .+.+|.|||..||++||.++|++|++ .++++..           +|-+||-.
T Consensus        14 ~g~l~~l~~ll~~~s~-~ei~~l~~--~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWa   90 (615)
T KOG0508|consen   14 DGKLQLLAKLLINSSN-EEIISLIG--EVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWA   90 (615)
T ss_pred             hhhHHHHHHHHhCCch-HHHHHHhc--cccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhH
Confidence            4455544444444433 33444433  34568899999999999999999998 4776643           67789999


Q ss_pred             HHHcCCHHHHHHHHhCCCCccccCC-CccHHHHHHhCCCHHHHHHHHhCCCCC------CchHHHHHHHcCCHHHHHHHH
Q psy817          158 AAFNGSIKGCSWLMLHGHDINFTKD-SYTPLHFAVLGNYVDCAKFLIKNKAHI------HETIVHSAVSTNAVDCVQLLL  230 (854)
Q Consensus       158 A~~~g~~~iv~~Ll~~g~~~~~~~~-g~t~L~~A~~~~~~~iv~~Ll~~~~~~------~~t~L~~A~~~~~~~~v~~Ll  230 (854)
                      |+..||+++||.|+++|+++|.+.. +.|||--||..|++|++|+|+++|+++      |.|+||.|+..||.+++++|+
T Consensus        91 AsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLl  170 (615)
T KOG0508|consen   91 ASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLL  170 (615)
T ss_pred             HhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHH
Confidence            9999999999999999999997664 679999999999999999999999998      899999999999999999999


Q ss_pred             HCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHh
Q psy817          231 SLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLE  299 (854)
Q Consensus       231 ~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~  299 (854)
                      +.|+|+|.++..|.||||.|++.|++|++++|+.++ +.++.  +..|.|||..|+..|+.++|+.|++
T Consensus       171 e~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~g-a~i~~--d~~GmtPL~~Aa~tG~~~iVe~L~~  236 (615)
T KOG0508|consen  171 EQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHG-AKIDV--DGHGMTPLLLAAVTGHTDIVERLLQ  236 (615)
T ss_pred             HhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCC-ceeee--cCCCCchHHHHhhhcchHHHHHHhc
Confidence            999999999999999999999999999999999987 65553  3458999999999999999999994

>KOG4177|consensus

Probab=100.00  E-value=4.6e-36  Score=345.51  Aligned_cols=386  Identities=26%  Similarity=0.336  Sum_probs=324.0

Q ss_pred             cchhHHHhhhccCCCcchhhhhhhhhccCCCccccchhhcchhhhhccccchhhchhhhHHHHHHHHHhcCCChHHHHHH
Q psy817           20 TRFPLALMRSKTSKSYSTKKAMFNQLNDEKPTMVDNMRTDSLEETISDELSYKVCKESIRASLLEAMKMSSGDVNVLYAI   99 (854)
Q Consensus        20 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~l~~~~   99 (854)
                      +...+++...+.+.+.++++.-     .+...+...+..+....++.+++....+....+.+++.+-  ..|.......+
T Consensus       255 ~~i~~~l~~~ga~~~~~~vr~~-----tplh~AA~~~~~e~~~~ll~~ga~~~~~~~~~kt~l~~a~--~~g~~~i~~~~  327 (1143)
T KOG4177|consen  255 LDIVKLLLQHGASVNVSTVRGE-----TPLHMAARAGQVEVCKLLLQNGADVLAKARDDQTPLHIAS--RLGHEEIVHLL  327 (1143)
T ss_pred             hhHHHHHHhcccccCccccccc-----CcchhhhccchhhhHhhhhccCcccccccccccChhhhhc--ccchHHHHHHH
Confidence            4445555565555555555322     2233333444555555666777777777777666666433  34444444443


Q ss_pred             HcCCCChhHHHHHhhhcccccCCcHHHHHHHcCCHHHHHHHHHcCCCCC---CCCccHHHHHHHcCCHHHHHHHHhCCCC
Q psy817          100 ENSLYEPDEMATLFSKASQAEKTTALLWCVFVKREDLLDALHQLGADLS---NDKYGALHLAAFNGSIKGCSWLMLHGHD  176 (854)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~---~~g~t~L~~A~~~g~~~iv~~Ll~~g~~  176 (854)
                      ......+        ++.+..|.||+|.|+..|+.++..+|...+.+-.   ..|.||+|.|+..|..+++++++++|++
T Consensus       328 l~~~~~~--------~aar~~g~t~lHlaa~~~~~~~~~~l~~~~~~~~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~  399 (1143)
T KOG4177|consen  328 LQAGATP--------NAARTAGYTPLHLAAKEGQVEVAGALLEHGAQRRQAEEKGFTPLHLAVKSGRVSVVELLLEAGAD  399 (1143)
T ss_pred             hhccCCc--------cccCcCCcccccHhhhhhhHHHHHHhhccccccCcccccCCcchhhhcccCchhHHHhhhhccCC
Confidence            3332221        3567789999999999999998888888876653   3899999999999999999999999999


Q ss_pred             ccccC-CCccHHHHHHhCCCHHHHHHHHhCCCCC------CchHHHHHHHcC-CHHHHHHHHHCCCCCCCCCCCCCcHHH
Q psy817          177 INFTK-DSYTPLHFAVLGNYVDCAKFLIKNKAHI------HETIVHSAVSTN-AVDCVQLLLSLQINPNVLNNKGVSPLH  248 (854)
Q Consensus       177 ~~~~~-~g~t~L~~A~~~~~~~iv~~Ll~~~~~~------~~t~L~~A~~~~-~~~~v~~Ll~~g~~~~~~d~~g~t~L~  248 (854)
                      +|... .|.||||.|+..++.++++.++++|++.      |.|++|.|+..| ..+....+++.|+++|.....|.||||
T Consensus       400 ~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lh  479 (1143)
T KOG4177|consen  400 PNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLH  479 (1143)
T ss_pred             cccCCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchh
Confidence            88766 5999999999999999999999999887      899999999999 899999999999999999999999999


Q ss_pred             HHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHH
Q psy817          249 IAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECME  328 (854)
Q Consensus       249 ~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~  328 (854)
                      .|+..|+.++++.|++.+ +..+... ..+.+++|.|...++..+++.++++|++++.++.+|.||||.|+..|+.++|+
T Consensus       480 laaq~Gh~~~~~llle~~-~~~~~~~-~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~Vk  557 (1143)
T KOG4177|consen  480 LAAQEGHTEVVQLLLEGG-ANDNLDA-KKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVK  557 (1143)
T ss_pred             hhhccCCchHHHHhhhcC-CccCccc-hhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHH
Confidence            999999999999999976 5555443 56779999999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----
Q psy817          329 MLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD----  404 (854)
Q Consensus       329 ~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----  404 (854)
                      +|+++|+|++.+++.|+||||.||..|  ..+++++|+++|+++|..|.+|.|||++|+..|+.++++.|+..|++    
T Consensus       558 fLLe~gAdv~ak~~~G~TPLH~Aa~~G--~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~  635 (1143)
T KOG4177|consen  558 FLLEHGADVNAKDKLGYTPLHQAAQQG--HNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAAT  635 (1143)
T ss_pred             HhhhCCccccccCCCCCChhhHHHHcC--hHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCccccc
Confidence            999999999999999999999999999  77889999999999999999999999999999999999999999999    


Q ss_pred             -ccccCCCCCCHHHHHHhcCC
Q psy817          405 -ISSKTPSGSSALSIIMRNTP  424 (854)
Q Consensus       405 -~~~~~~~g~t~l~~a~~~~~  424 (854)
                       ....+..|.+|...+.....
T Consensus       636 ~~~~e~~~g~~p~~v~e~~~~  656 (1143)
T KOG4177|consen  636 DPVKENRKGAVPEDVAEELDT  656 (1143)
T ss_pred             cchhhhhcccChhhHHHHhhh
Confidence             77777889999988765433

>PHA02798 ankyrin-like protein; Provisional

Probab=100.00  E-value=6.9e-35  Score=331.17  Aligned_cols=272  Identities=18%  Similarity=0.231  Sum_probs=216.2

Q ss_pred             CHHHHHHHHHcCCCCCC-CCccHHHHHHH--cCCHHHHHHHHhCCCCccccC-CCccHHHHHHhC-----CCHHHHHHHH
Q psy817          133 REDLLDALHQLGADLSN-DKYGALHLAAF--NGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLG-----NYVDCAKFLI  203 (854)
Q Consensus       133 ~~~iv~~Ll~~g~~~~~-~g~t~L~~A~~--~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~-----~~~~iv~~Ll  203 (854)
                      ..+.|+.|++.+...+. .|.|+++.+..  .++.++|++|+++|+|+|..+ +|.||||.|+.+     ++.+++++|+
T Consensus        17 ~~~~v~~ll~~~~~~~~~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll   96 (489)
T PHA02798         17 KLSTVKLLIKSCNPNEIVNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILI   96 (489)
T ss_pred             cHHHHHHHHhcCChhhhcccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHH
Confidence            35677777766532222 56676654443  346788888888888887655 477888877654     5567777777


Q ss_pred             hCCCCC------CchHHHHHHHcC---CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC---HHHHHHHHHcCCCCcc
Q psy817          204 KNKAHI------HETIVHSAVSTN---AVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGL---ISCLKAILDSGMADVD  271 (854)
Q Consensus       204 ~~~~~~------~~t~L~~A~~~~---~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~---~~iv~~Ll~~~~~~~~  271 (854)
                      ++|+++      |.||||.|+.++   +.+++++|+++|+|++..|..|.||||+|+..|+   .+++++|+++| ++++
T Consensus        97 ~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~g-adin  175 (489)
T PHA02798         97 ENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKG-VDIN  175 (489)
T ss_pred             HCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhC-CCcc
Confidence            777765      677777777764   6788999999999999999999999999999887   89999999886 8888


Q ss_pred             ccccCCcCcHHHHHHHc----CCHHHHHHHHhcCCCcCCCCCCCCCHHH-------HHHhcCCHHHHHHHHhCCCCCCCc
Q psy817          272 IKTKERRVTALHLAAEN----GYVECLRILLENHANCNERNHKEQIPLH-------LAAKCQSVECMEMLLRKGSQVNAS  340 (854)
Q Consensus       272 ~~~~~~~~t~L~~A~~~----g~~~~v~~Ll~~~~~~~~~~~~g~t~L~-------~A~~~~~~~~v~~Ll~~g~~~~~~  340 (854)
                      .+++..|.||||.++..    ++.+++++|+++|++++..+..|.++++       .+...++.+++++|+. |+++|.+
T Consensus       176 ~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-~~dvN~~  254 (489)
T PHA02798        176 THNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS-YIDINQV  254 (489)
T ss_pred             cccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh-cCCCCCc
Confidence            77666777999988764    4789999999999999888888888876       2445567788888765 5899999


Q ss_pred             cCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc
Q psy817          341 DCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSK  408 (854)
Q Consensus       341 ~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~  408 (854)
                      |..|.||||.|+..+  +.+++++|+++|+|+|..|..|.||||+|+..++.++++.|+++|++++..
T Consensus       255 d~~G~TPL~~A~~~~--~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~~~i  320 (489)
T PHA02798        255 DELGFNPLYYSVSHN--NRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKKPNKNTI  320 (489)
T ss_pred             CcCCccHHHHHHHcC--cHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHccCCCHHHH
Confidence            999999999999888  778899999999999999999999999999999999999999999887654

>KOG4412|consensus

Probab=100.00  E-value=2.1e-35  Score=262.27  Aligned_cols=207  Identities=28%  Similarity=0.380  Sum_probs=187.8

Q ss_pred             chHHHHHHHcCCHHHHHHHHHCCC-CCCCCCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHc
Q psy817          211 ETIVHSAVSTNAVDCVQLLLSLQI-NPNVLNN-KGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAEN  288 (854)
Q Consensus       211 ~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~d~-~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~  288 (854)
                      .++.+.++...-..-++.+++... ..+.++. +|+||||+||..|+.+++++|++..+..+|.+ ++.|+||||.|+..
T Consensus         4 ~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddk-DdaGWtPlhia~s~   82 (226)
T KOG4412|consen    4 ASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDK-DDAGWTPLHIAASN   82 (226)
T ss_pred             cchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCc-cccCCchhhhhhhc
Confidence            455666677777777777777644 5676666 99999999999999999999998777888887 46789999999999


Q ss_pred             CCHHHHHHHHhc-CCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHh
Q psy817          289 GYVECLRILLEN-HANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLK  367 (854)
Q Consensus       289 g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~  367 (854)
                      |+.|+|+.|+.+ |+++|..+..|.|+||+|+..|+.+++++|+++|+.++.+|..|.||||.|+.-|  +++++++|+.
T Consensus        83 g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavG--klkvie~Li~  160 (226)
T KOG4412|consen   83 GNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVG--KLKVIEYLIS  160 (226)
T ss_pred             CcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhcc--chhhHHHHHh
Confidence            999999999998 9999999999999999999999999999999999999999999999999999999  8888999999


Q ss_pred             CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHh
Q psy817          368 WGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMR  421 (854)
Q Consensus       368 ~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~  421 (854)
                      .|+.+|.+|+.|+||||.|...|+.+...+|+++|||.+..|+.| ||+..+..
T Consensus       161 ~~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~-t~~~~a~~  213 (226)
T KOG4412|consen  161 QGAPLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG-TALRIACN  213 (226)
T ss_pred             cCCCCCcccccCccHHHHHHhccCchHHHHHHHhccceeeccccC-chHHHHHH
Confidence            999999999999999999999999999999999999999999988 99877653

>PHA02875 ankyrin repeat protein; Provisional

Probab=100.00  E-value=4.3e-34  Score=319.24  Aligned_cols=230  Identities=23%  Similarity=0.271  Sum_probs=166.3

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHhCCCH
Q psy817          121 KTTALLWCVFVKREDLLDALHQLGADLSN---DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGNYV  196 (854)
Q Consensus       121 ~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~---~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~~~~  196 (854)
                      .+++|+.|+..|+.+++++|+++|+++|.   +|.||||+|+..|+.+++++|+++|++++..+ ++.||||.|+..|+.
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~   81 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDV   81 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCH
Confidence            46889999999999999999999988865   78999999999999999999999998887663 578888888888888


Q ss_pred             HHHHHHHhCCCCC-------CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q psy817          197 DCAKFLIKNKAHI-------HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMAD  269 (854)
Q Consensus       197 ~iv~~Ll~~~~~~-------~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~  269 (854)
                      +++++|++.|+..       |.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++++ ++
T Consensus        82 ~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g-~~  160 (413)
T PHA02875         82 KAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHK-AC  160 (413)
T ss_pred             HHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcC-CC
Confidence            8888888877643       566777777777777777777777777666666677777777666666666666665 55


Q ss_pred             ccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCC-CHHHHHHhcCCHHHHHHHHhCCCCCCCc---cCCCC
Q psy817          270 VDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQ-IPLHLAAKCQSVECMEMLLRKGSQVNAS---DCDNR  345 (854)
Q Consensus       270 ~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~-t~L~~A~~~~~~~~v~~Ll~~g~~~~~~---~~~g~  345 (854)
                      ++.++ ..|.||||+|+..|+.+++++|+++|++++..+..|. ||+|+|+..|+.+++++|+++|++++..   +..+.
T Consensus       161 ~~~~d-~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~~~~~~~~~  239 (413)
T PHA02875        161 LDIED-CCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMFMIEGEEC  239 (413)
T ss_pred             CCCCC-CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchHhhcCCCch
Confidence            65554 3445666666666666666666666666666665553 5666666666666666666666666543   33455


Q ss_pred             cHHHHHH
Q psy817          346 TPLHASL  352 (854)
Q Consensus       346 t~L~~a~  352 (854)
                      ||++.++
T Consensus       240 t~l~~~~  246 (413)
T PHA02875        240 TILDMIC  246 (413)
T ss_pred             HHHHHHH
Confidence            5555443

>PHA02875 ankyrin repeat protein; Provisional

Probab=100.00  E-value=3.4e-34  Score=320.07  Aligned_cols=241  Identities=25%  Similarity=0.302  Sum_probs=201.8

Q ss_pred             CccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHH
Q psy817          151 KYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLL  229 (854)
Q Consensus       151 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~L  229 (854)
                      .+++||.|+..|+.+++++|+++|++++..+ +|.||||+|+..|+.+++++|++                         
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~-------------------------   56 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMK-------------------------   56 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHh-------------------------
Confidence            4678999999999999999999999888765 57777777776666555555555                         


Q ss_pred             HHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCC
Q psy817          230 LSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNH  309 (854)
Q Consensus       230 l~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~  309 (854)
                        +|++++..+..+.||||.|+..|+.++++.|++.+ ++.+......|.||||+|+..|+.+++++|+++|++++.++.
T Consensus        57 --~ga~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~  133 (413)
T PHA02875         57 --HGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLG-KFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNT  133 (413)
T ss_pred             --CCCCccccCCCcccHHHHHHHCCCHHHHHHHHHcC-CcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCC
Confidence              45566677778889999999999999999999887 444333344577999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCC-CHHHHHHH
Q psy817          310 KEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGY-SPIHIAAL  388 (854)
Q Consensus       310 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~-t~L~~A~~  388 (854)
                      .|.||||+|+..|+.+++++|+++|++++..|..|.||||.|+..|  +.+++++|+++|++++..+..|. ||+|+|+.
T Consensus       134 ~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g--~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~  211 (413)
T PHA02875        134 DKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKG--DIAICKMLLDSGANIDYFGKNGCVAALCYAIE  211 (413)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcC--CHHHHHHHHhCCCCCCcCCCCCCchHHHHHHH
Confidence            9999999999999999999999999999999999999999999998  78889999999999998888774 78888999


Q ss_pred             cCCHHHHHHHHHcCCCcccc---CCCCCCHHHHHHh
Q psy817          389 SELSQCVDCLIMHGADISSK---TPSGSSALSIIMR  421 (854)
Q Consensus       389 ~~~~~~v~~Ll~~ga~~~~~---~~~g~t~l~~a~~  421 (854)
                      .|+.+++++|+++|+|++..   +..+.||++.+..
T Consensus       212 ~~~~~iv~~Ll~~gad~n~~~~~~~~~~t~l~~~~~  247 (413)
T PHA02875        212 NNKIDIVRLFIKRGADCNIMFMIEGEECTILDMICN  247 (413)
T ss_pred             cCCHHHHHHHHHCCcCcchHhhcCCCchHHHHHHHh
Confidence            99999999999999998765   5678889887654

>PHA02792 ankyrin-like protein; Provisional

Probab=100.00  E-value=7.3e-34  Score=312.62  Aligned_cols=305  Identities=17%  Similarity=0.173  Sum_probs=245.7

Q ss_pred             hcccccCCcHHHH-HHHcCCHHHHHHHHHcCCCCCC---CCccHHHHHHH-cCCHHHHHHHHhCCCCccccC-CCccHHH
Q psy817          115 KASQAEKTTALLW-CVFVKREDLLDALHQLGADLSN---DKYGALHLAAF-NGSIKGCSWLMLHGHDINFTK-DSYTPLH  188 (854)
Q Consensus       115 ~~~~~~~~t~L~~-Aa~~g~~~iv~~Ll~~g~~~~~---~g~t~L~~A~~-~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~  188 (854)
                      +..+-+|.+++|+ |+.+|++|+|++|+++||++|.   .|.||+|+|+. .|+.|++++|+++|||++... .|.||++
T Consensus        65 ~~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~  144 (631)
T PHA02792         65 DYKNINDFDIFEYLCSDNIDIELLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIII  144 (631)
T ss_pred             CcCccCCccHHHHHHHhcccHHHHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhh
Confidence            4456678889987 5567899999999999999976   67899999966 699999999999999987544 6999998


Q ss_pred             HHHhCCC----HHHH-----HHHHhCCCCCCchHHHHHHHcC-------CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Q psy817          189 FAVLGNY----VDCA-----KFLIKNKAHIHETIVHSAVSTN-------AVDCVQLLLSLQINPNVLNNKGVSPLHIAAD  252 (854)
Q Consensus       189 ~A~~~~~----~~iv-----~~Ll~~~~~~~~t~L~~A~~~~-------~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~  252 (854)
                      .-+....    .+..     .+.+......|.||||+|+.++       +.|+++.|+++|++++..|..|.||||+|+.
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~  224 (631)
T PHA02792        145 EQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVD  224 (631)
T ss_pred             hhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHH
Confidence            7665321    1111     2344555566999999999999       8999999999999999999999999999999


Q ss_pred             cC--CHHHHHHHHHcCCC---------------------Ccccc--c--cCCc---------------------------
Q psy817          253 RG--LISCLKAILDSGMA---------------------DVDIK--T--KERR---------------------------  278 (854)
Q Consensus       253 ~g--~~~iv~~Ll~~~~~---------------------~~~~~--~--~~~~---------------------------  278 (854)
                      +.  +.|++++|++....                     ++|..  .  -+++                           
T Consensus       225 ~~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  304 (631)
T PHA02792        225 KCDIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTD  304 (631)
T ss_pred             cccchHHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhH
Confidence            99  88999999874210                     01100  0  0000                           


Q ss_pred             --CcHHHHHHHcC--CHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCC--CcHHHHHH
Q psy817          279 --VTALHLAAENG--YVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN--RTPLHASL  352 (854)
Q Consensus       279 --~t~L~~A~~~g--~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g--~t~L~~a~  352 (854)
                        +..||.-..++  +.+++++|+++|++...  ..+..+++.||..|+.+++++|+++|++++..|.+|  .||||.|+
T Consensus       305 ~~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~r--~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~  382 (631)
T PHA02792        305 SIQDLLSEYVSYHTVYINVIKCMIDEGATLYR--FKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTL  382 (631)
T ss_pred             HHHHHHHHHHhcCCccHHHHHHHHHCCCcccc--CCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHH
Confidence              12344444555  67899999999998752  225567899999999999999999999999988775  69999877


Q ss_pred             hcCCCC-hHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHh
Q psy817          353 SKNILS-VHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMR  421 (854)
Q Consensus       353 ~~~~~~-~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~  421 (854)
                      ...... .+++++|+++|+|+|.+|..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|..
T Consensus       383 ~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~  452 (631)
T PHA02792        383 SIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVI  452 (631)
T ss_pred             HhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence            765322 346899999999999999999999999999999999999999999999999999999999975

>KOG4412|consensus

Probab=100.00  E-value=1.5e-33  Score=250.59  Aligned_cols=208  Identities=29%  Similarity=0.380  Sum_probs=173.1

Q ss_pred             CccHHHHHHHcCCHHHHHHHHhCCC-CccccC--CCccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHH
Q psy817          151 KYGALHLAAFNGSIKGCSWLMLHGH-DINFTK--DSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQ  227 (854)
Q Consensus       151 g~t~L~~A~~~g~~~iv~~Ll~~g~-~~~~~~--~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~  227 (854)
                      +.++.+.+|......-++.+++... ..+..+  +|+||||+||..|+.+++++|++                       
T Consensus         3 ~~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLls-----------------------   59 (226)
T KOG4412|consen    3 YASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLS-----------------------   59 (226)
T ss_pred             ccchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHh-----------------------
Confidence            4566777777777777777776644 334332  46677777766666666665554                       


Q ss_pred             HHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCC
Q psy817          228 LLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNER  307 (854)
Q Consensus       228 ~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~  307 (854)
                         +.+..+|.+|..|+||||.|+..|+.++|+.|+.+.++++|..+ .+|.|+||+|+..|+.|++++|+++|+.++.+
T Consensus        60 ---q~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~t-n~G~T~LHyAagK~r~eIaqlLle~ga~i~~k  135 (226)
T KOG4412|consen   60 ---QPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATT-NGGQTCLHYAAGKGRLEIAQLLLEKGALIRIK  135 (226)
T ss_pred             ---cCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceec-CCCcceehhhhcCChhhHHHHHHhcCCCCccc
Confidence               22567888899999999999999999999999999779999876 56779999999999999999999999999999


Q ss_pred             CCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHH
Q psy817          308 NHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAA  387 (854)
Q Consensus       308 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~  387 (854)
                      |..|+||||-|+.-|+.+++++|+..|+.+|.+|+.|+||||.|...+  ..+...+|+++|+|++..|++| ||+..|+
T Consensus       136 D~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~--~~d~a~lLV~~gAd~~~edke~-t~~~~a~  212 (226)
T KOG4412|consen  136 DKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEG--HPDVAVLLVRAGADTDREDKEG-TALRIAC  212 (226)
T ss_pred             ccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhcc--CchHHHHHHHhccceeeccccC-chHHHHH
Confidence            999999999999999999999999999999999999999999997777  5566889999999999999988 9987765


Q ss_pred             H
Q psy817          388 L  388 (854)
Q Consensus       388 ~  388 (854)
                      -
T Consensus       213 ~  213 (226)
T KOG4412|consen  213 N  213 (226)
T ss_pred             H
Confidence            4

>PHA02798 ankyrin-like protein; Provisional

Probab=100.00  E-value=2.1e-32  Score=310.89  Aligned_cols=269  Identities=19%  Similarity=0.276  Sum_probs=230.9

Q ss_pred             CHHHHHHHHhCCCCccccCCCccHHHHHHh--CCCHHHHHHHHhCCCCC------CchHHHHHHHc-----CCHHHHHHH
Q psy817          163 SIKGCSWLMLHGHDINFTKDSYTPLHFAVL--GNYVDCAKFLIKNKAHI------HETIVHSAVST-----NAVDCVQLL  229 (854)
Q Consensus       163 ~~~iv~~Ll~~g~~~~~~~~g~t~L~~A~~--~~~~~iv~~Ll~~~~~~------~~t~L~~A~~~-----~~~~~v~~L  229 (854)
                      ..+.|+.|++.+ +++...++.|+++.+..  .++.+++++|+++|+++      |.||||.|+.+     ++.++++.|
T Consensus        17 ~~~~v~~ll~~~-~~~~~~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~L   95 (489)
T PHA02798         17 KLSTVKLLIKSC-NPNEIVNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKIL   95 (489)
T ss_pred             cHHHHHHHHhcC-ChhhhcccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHH
Confidence            578999999875 44434557787775443  45899999999999987      78999999865     679999999


Q ss_pred             HHCCCCCCCCCCCCCcHHHHHHHcC---CHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCC---HHHHHHHHhcCCC
Q psy817          230 LSLQINPNVLNNKGVSPLHIAADRG---LISCLKAILDSGMADVDIKTKERRVTALHLAAENGY---VECLRILLENHAN  303 (854)
Q Consensus       230 l~~g~~~~~~d~~g~t~L~~A~~~g---~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~---~~~v~~Ll~~~~~  303 (854)
                      +++|+|+|.+|..|.||||+|+.+|   +.+++++|+++| ++++..+ ..|.||||+|++.|+   .+++++|+++|++
T Consensus        96 l~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~G-advn~~d-~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gad  173 (489)
T PHA02798         96 IENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENG-ADTTLLD-KDGFTMLQVYLQSNHHIDIEIIKLLLEKGVD  173 (489)
T ss_pred             HHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcC-CCccccC-CCCCcHHHHHHHcCCcchHHHHHHHHHhCCC
Confidence            9999999999999999999999986   789999999987 9999876 456799999999998   9999999999999


Q ss_pred             cCCCC-CCCCCHHHHHHhc----CCHHHHHHHHhCCCCCCCccCCCCcHHHHHH-----hcCCCChHHHHHHHhCCCCCc
Q psy817          304 CNERN-HKEQIPLHLAAKC----QSVECMEMLLRKGSQVNASDCDNRTPLHASL-----SKNILSVHPLEILLKWGANVN  373 (854)
Q Consensus       304 ~~~~~-~~g~t~L~~A~~~----~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~-----~~~~~~~~~v~~Ll~~g~d~n  373 (854)
                      ++..+ ..|.||||.++..    ++.+++++|+++|++++..+..|.++++...     .......+++++|.. |+|+|
T Consensus       174 in~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-~~dvN  252 (489)
T PHA02798        174 INTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS-YIDIN  252 (489)
T ss_pred             cccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh-cCCCC
Confidence            99885 5789999998764    4899999999999999999999999877211     122225667777665 69999


Q ss_pred             cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHHhhhhcC
Q psy817          374 ARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLD  435 (854)
Q Consensus       374 ~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~  435 (854)
                      .+|..|.||||+|+..|+.+++++|+++|+|++.+|..|.|||+.|++++...+...+....
T Consensus       253 ~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~  314 (489)
T PHA02798        253 QVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKK  314 (489)
T ss_pred             CcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHccC
Confidence            99999999999999999999999999999999999999999999999999888776654443

>KOG0508|consensus

Probab=100.00  E-value=1.8e-32  Score=277.92  Aligned_cols=204  Identities=25%  Similarity=0.321  Sum_probs=177.5

Q ss_pred             HHHHcCCHHHHHHHHHcCCCC--------CCCCccHHHHHHHcCCHHHHHHHHhC-CCCccc------cC---CCccHHH
Q psy817          127 WCVFVKREDLLDALHQLGADL--------SNDKYGALHLAAFNGSIKGCSWLMLH-GHDINF------TK---DSYTPLH  188 (854)
Q Consensus       127 ~Aa~~g~~~iv~~Ll~~g~~~--------~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~------~~---~g~t~L~  188 (854)
                      .|++.|....+..|+.+..+.        ..+|.|||-.||++||.++|++|+++ ++++..      +.   +|.+||-
T Consensus        10 naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLW   89 (615)
T KOG0508|consen   10 NAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLW   89 (615)
T ss_pred             HHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhh
Confidence            455556655555554432211        22789999999999999999999995 677653      22   3789999


Q ss_pred             HHHhCCCHHHHHHHHhCCCCC------CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q psy817          189 FAVLGNYVDCAKFLIKNKAHI------HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAI  262 (854)
Q Consensus       189 ~A~~~~~~~iv~~Ll~~~~~~------~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~L  262 (854)
                      .|+..||+++|+.|+++|+++      +.|||..||..|+.++|++|+++|+|++..|..|.|.||+|+..|+.+|+++|
T Consensus        90 aAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyL  169 (615)
T KOG0508|consen   90 AASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYL  169 (615)
T ss_pred             HHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHH
Confidence            999999999999999999988      45899999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhC
Q psy817          263 LDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRK  333 (854)
Q Consensus       263 l~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~  333 (854)
                      ++.| +|+|.++ ..|.|+||.|++.|++|++++|+++|+.+. +|..|.|||..|+..|+.++|+.|++.
T Consensus       170 le~g-ADvn~ks-~kGNTALH~caEsG~vdivq~Ll~~ga~i~-~d~~GmtPL~~Aa~tG~~~iVe~L~~~  237 (615)
T KOG0508|consen  170 LEQG-ADVNAKS-YKGNTALHDCAESGSVDIVQLLLKHGAKID-VDGHGMTPLLLAAVTGHTDIVERLLQC  237 (615)
T ss_pred             HHhC-CCcchhc-ccCchHHHhhhhcccHHHHHHHHhCCceee-ecCCCCchHHHHhhhcchHHHHHHhcC
Confidence            9997 9999876 567799999999999999999999999884 566799999999999999999999953

>KOG0509|consensus

Probab=100.00  E-value=6.7e-31  Score=279.56  Aligned_cols=209  Identities=27%  Similarity=0.367  Sum_probs=197.9

Q ss_pred             chHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcC
Q psy817          211 ETIVHSAVSTNAVDCVQLLLSL-QINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENG  289 (854)
Q Consensus       211 ~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g  289 (854)
                      ...+..|++.|.++.|+.|++. |.+++..|.+|.|+||+|+.+++++++++|++++ +++|......+.||||+|+++|
T Consensus        45 ~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~g-advn~~gG~l~stPLHWAar~G  123 (600)
T KOG0509|consen   45 LDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHG-ADVNAIGGVLGSTPLHWAARNG  123 (600)
T ss_pred             hhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcC-CCccccCCCCCCCcchHHHHcC
Confidence            4567789999999999999998 9999999999999999999999999999999997 9999998888899999999999


Q ss_pred             CHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCC
Q psy817          290 YVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWG  369 (854)
Q Consensus       290 ~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g  369 (854)
                      +..+|++|+++|+|++.+|..|.+|+|+|++.|+.-++-+|+.+|+++|.+|.+|+||||+|+.+++..  .+..|++.|
T Consensus       124 ~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~--~v~~LL~f~  201 (600)
T KOG0509|consen  124 HISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFAL--FVRRLLKFG  201 (600)
T ss_pred             cHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccH--HHHHHHHhc
Confidence            999999999999999999999999999999999999999999999999999999999999999999533  399999999


Q ss_pred             CCCccCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhc
Q psy817          370 ANVNARD-IFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRN  422 (854)
Q Consensus       370 ~d~n~~d-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~  422 (854)
                      ++++.+| ..|+||||||+..|+..++.++++.|++.+.+|.+|.||+++|.++
T Consensus       202 a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  202 ASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             ccccccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence            9999988 8999999999999999999988888899999999999999999765

>PHA02792 ankyrin-like protein; Provisional

Probab=99.97  E-value=3.4e-29  Score=275.88  Aligned_cols=311  Identities=16%  Similarity=0.163  Sum_probs=238.9

Q ss_pred             HHHHHHhcCCChHHHHHHHcCCCChhHHHHHhhhcccccCCcHHHHHHH-cCCHHHHHHHHHcCCCCCC-----------
Q psy817           82 LLEAMKMSSGDVNVLYAIENSLYEPDEMATLFSKASQAEKTTALLWCVF-VKREDLLDALHQLGADLSN-----------  149 (854)
Q Consensus        82 l~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~Aa~-~g~~~iv~~Ll~~g~~~~~-----------  149 (854)
                      +++.++...|++.+++.+.....++        +..+..+.+++++|+. .|+.|++++|+++||+++.           
T Consensus        74 ~~~~~~s~n~~lElvk~LI~~GAdv--------N~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~  145 (631)
T PHA02792         74 IFEYLCSDNIDIELLKLLISKGLEI--------NSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIE  145 (631)
T ss_pred             HHHHHHHhcccHHHHHHHHHcCCCc--------ccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhh
Confidence            5667778889988887765444432        2446678999999976 6999999999999987310           


Q ss_pred             ----------------------------CCccHHHHHHHcC-------CHHHHHHHHhCCCCccccC-CCccHHHHHHhC
Q psy817          150 ----------------------------DKYGALHLAAFNG-------SIKGCSWLMLHGHDINFTK-DSYTPLHFAVLG  193 (854)
Q Consensus       150 ----------------------------~g~t~L~~A~~~g-------~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~  193 (854)
                                                  .|.||||+|+.++       +.|+++.|+++|++++..+ .|.||||+|+.+
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~  225 (631)
T PHA02792        146 QITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDK  225 (631)
T ss_pred             hcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHc
Confidence                                        4889999999998       8999999999999998655 589999999999


Q ss_pred             C--CHHHHHHHHhCCCCCCc--hHHHHHHH------cCC--HHHHHHHHHCCCCCCC------CCCC-------------
Q psy817          194 N--YVDCAKFLIKNKAHIHE--TIVHSAVS------TNA--VDCVQLLLSLQINPNV------LNNK-------------  242 (854)
Q Consensus       194 ~--~~~iv~~Ll~~~~~~~~--t~L~~A~~------~~~--~~~v~~Ll~~g~~~~~------~d~~-------------  242 (854)
                      .  +.|++++|++......+  ..|..-.+      .+.  ..+|..|++.+-..+.      .+..             
T Consensus       226 ~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  305 (631)
T PHA02792        226 CDIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDS  305 (631)
T ss_pred             ccchHHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHH
Confidence            8  88999999885322111  12221111      122  3488888887542111      1111             


Q ss_pred             CCcHHHHHHHcC--CHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCC--CCHHHHH
Q psy817          243 GVSPLHIAADRG--LISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKE--QIPLHLA  318 (854)
Q Consensus       243 g~t~L~~A~~~g--~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g--~t~L~~A  318 (854)
                      -+-.||.=..++  +.+++++|+++| ++.+   ...+..+++.|+.+|+.++|++|+++|++++.+|..|  .||||.|
T Consensus       306 ~q~~l~~Yl~~~~v~ieiIK~LId~G-a~~~---r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A  381 (631)
T PHA02792        306 IQDLLSEYVSYHTVYINVIKCMIDEG-ATLY---RFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPT  381 (631)
T ss_pred             HHHHHHHHHhcCCccHHHHHHHHHCC-Cccc---cCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHH
Confidence            011345555555  789999999998 5543   1224578999999999999999999999999998875  6999998


Q ss_pred             HhcCCHH---HHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHH---cC--
Q psy817          319 AKCQSVE---CMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAAL---SE--  390 (854)
Q Consensus       319 ~~~~~~~---~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~---~~--  390 (854)
                      +..+..+   ++++|+++|+++|.+|..|.||||.|+..+  +.+++++|+++|+++|.+|..|.||||+|+.   .+  
T Consensus       382 ~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~--n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~  459 (631)
T PHA02792        382 LSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESH--SVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIP  459 (631)
T ss_pred             HHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcC--CHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccH
Confidence            7766654   688999999999999999999999999998  7888999999999999999999999999976   22  


Q ss_pred             -----CHHHHHHHHHcCCCcc
Q psy817          391 -----LSQCVDCLIMHGADIS  406 (854)
Q Consensus       391 -----~~~~v~~Ll~~ga~~~  406 (854)
                           ..++++.|+++|.++.
T Consensus       460 ~i~~~~~~il~lLLs~~p~i~  480 (631)
T PHA02792        460 EIAELYIKILEIILSKLPTIE  480 (631)
T ss_pred             HHHHHHHHHHHHHHhcCCChh
Confidence                 2567899999987764

>KOG0509|consensus

Probab=99.97  E-value=1e-29  Score=270.62  Aligned_cols=199  Identities=25%  Similarity=0.364  Sum_probs=136.1

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHc-CCCCCC---CCccHHHHHHHcCCHHHHHHHHhCCCCccccCC--CccHHHHHHhCCC
Q psy817          122 TTALLWCVFVKREDLLDALHQL-GADLSN---DKYGALHLAAFNGSIKGCSWLMLHGHDINFTKD--SYTPLHFAVLGNY  195 (854)
Q Consensus       122 ~t~L~~Aa~~g~~~iv~~Ll~~-g~~~~~---~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~--g~t~L~~A~~~~~  195 (854)
                      ...+..|++.|..+-|+.|++. |.+++.   +|.|+||+||.+++++++++|+++|+|+|....  +.||||+|+++|+
T Consensus        45 ~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~  124 (600)
T KOG0509|consen   45 LDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGH  124 (600)
T ss_pred             hhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCc
Confidence            4567889999999999999988 777644   889999999999999999999999999987652  6777777777777


Q ss_pred             HHHHHHHHhCCCCC------CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q psy817          196 VDCAKFLIKNKAHI------HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMAD  269 (854)
Q Consensus       196 ~~iv~~Ll~~~~~~------~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~  269 (854)
                      ..++++|+++|+++      |.+|+|.|+..|+...|-+|+.+|+|+|.+|.+|+||||+|+.+|+...+..|+.-+ +.
T Consensus       125 ~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~-a~  203 (600)
T KOG0509|consen  125 ISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFG-AS  203 (600)
T ss_pred             HHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhc-cc
Confidence            77776666666655      556666666666666666666666666666666666666666666555555555554 55


Q ss_pred             ccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhc
Q psy817          270 VDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKC  321 (854)
Q Consensus       270 ~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~  321 (854)
                      ++..++..|.||||+|+..|+..+++++++.|++.+..|.+|.||+.+|.++
T Consensus       204 ~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  204 LLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             ccccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence            5555555555666666666666666654555555555555566666655544

>KOG4369|consensus

Probab=99.96  E-value=8.2e-30  Score=279.65  Aligned_cols=313  Identities=23%  Similarity=0.227  Sum_probs=288.7

Q ss_pred             cccccCCcHHHHHHHcCCHHHHHHHHHcCCCCC---CCCccHHHHHHHcCCHHHHHHHHhCCCCccccCC--CccHHHHH
Q psy817          116 ASQAEKTTALLWCVFVKREDLLDALHQLGADLS---NDKYGALHLAAFNGSIKGCSWLMLHGHDINFTKD--SYTPLHFA  190 (854)
Q Consensus       116 ~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~---~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~--g~t~L~~A  190 (854)
                      ....+..|+|-.||..||.|+|++|+..|+++.   ..|.+||.+|+-.||..+|+.|+.+.++++...+  +.|+|.+|
T Consensus       752 ~Te~n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSla  831 (2131)
T KOG4369|consen  752 LTEPNIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLA  831 (2131)
T ss_pred             ccCccccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEe
Confidence            345567899999999999999999999999984   4899999999999999999999999999987654  89999999


Q ss_pred             HhCCCHHHHHHHHhCCCCC------CchHHHHHHHcCCHHHHHHHHHCCCCCCCCC--CCCCcHHHHHHHcCCHHHHHHH
Q psy817          191 VLGNYVDCAKFLIKNKAHI------HETIVHSAVSTNAVDCVQLLLSLQINPNVLN--NKGVSPLHIAADRGLISCLKAI  262 (854)
Q Consensus       191 ~~~~~~~iv~~Ll~~~~~~------~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d--~~g~t~L~~A~~~g~~~iv~~L  262 (854)
                      |..|..++|++|+..|++.      ..|||..|...|..++|+.|+.+|.++|.+.  +.|.+||+.|..+|+.+.++.|
T Consensus       832 csggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~l  911 (2131)
T KOG4369|consen  832 CSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSL  911 (2131)
T ss_pred             cCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHH
Confidence            9999999999999999886      4799999999999999999999999988775  5699999999999999999999


Q ss_pred             HHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCcc-
Q psy817          263 LDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASD-  341 (854)
Q Consensus       263 l~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-  341 (854)
                      ++.+ .|+|..-..+.+|+|-+|+-.|+.++|.+||.+.+++..+.+.|.|||+-++..|.+|+=++|+..|+|.|..- 
T Consensus       912 l~~g-sdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~gad~nasPv  990 (2131)
T KOG4369|consen  912 LQPG-SDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNASPV  990 (2131)
T ss_pred             hccc-chhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhcccccccCCC
Confidence            9987 89998877788899999999999999999999999999999999999999999999999999999999988643 


Q ss_pred             -CCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Q psy817          342 -CDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIM  420 (854)
Q Consensus       342 -~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~  420 (854)
                       ....|+|-.++..|  +...+..|+...+.+..+++.|+|+|.+|+.-|+...+..|+++++|++..|+...+++.-|.
T Consensus       991 p~T~dtalti~a~kG--h~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d~qdnr~~S~~maaf 1068 (2131)
T KOG4369|consen  991 PNTWDTALTIPANKG--HTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADADQQDNRTNSRTMAAF 1068 (2131)
T ss_pred             CCcCCccceeecCCC--chhhhHHhhCCccceecccCCCCcccchhccCCccccchHHhhcccChhhhhcccccccHHHH
Confidence             34568899999999  556699999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCcchHHhh
Q psy817          421 RNTPSSISSVR  431 (854)
Q Consensus       421 ~~~~~~~~~~~  431 (854)
                      ++++..++...
T Consensus      1069 RKgh~~iVk~m 1079 (2131)
T KOG4369|consen 1069 RKGHFAIVKKM 1079 (2131)
T ss_pred             Hhchhheeccc
Confidence            99998776653

>PHA02795 ankyrin-like protein; Provisional

Probab=99.95  E-value=2.1e-27  Score=252.87  Aligned_cols=236  Identities=15%  Similarity=0.094  Sum_probs=170.9

Q ss_pred             HHHHHHcCCCCCCCCccHHHHHHHcCCHHHHHHHHhCCCCcc------cc-CCCccHHHHHHhCCCHHHHHHHHhCCCCC
Q psy817          137 LDALHQLGADLSNDKYGALHLAAFNGSIKGCSWLMLHGHDIN------FT-KDSYTPLHFAVLGNYVDCAKFLIKNKAHI  209 (854)
Q Consensus       137 v~~Ll~~g~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~------~~-~~g~t~L~~A~~~~~~~iv~~Ll~~~~~~  209 (854)
                      -++++.+|+++|..-.  --+|+..+..|++++|+.+|+++|      .. +.++|+||+|+.++               
T Consensus        65 ~~~~~~~~~~i~~~~~--~~~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~---------------  127 (437)
T PHA02795         65 YDYFRIHRDNIDQYIV--DRLFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNA---------------  127 (437)
T ss_pred             HHHHHHcCcchhhhhh--hhHHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhc---------------
Confidence            4778888888875111  118888888888888888888877      22 23556666555510               


Q ss_pred             CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccc----cCCcCcHHHHH
Q psy817          210 HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKT----KERRVTALHLA  285 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~----~~~~~t~L~~A  285 (854)
                                .|+.++|++|+++|+|++..  ++.||+|.|+.+|+.+++++|+++|..+.+...    ...+.+++|.|
T Consensus       128 ----------~n~~eiV~~LI~~GADIn~~--~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a  195 (437)
T PHA02795        128 ----------YVEIDIVDFMVDHGAVIYKI--ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLV  195 (437)
T ss_pred             ----------CCCHHHHHHHHHCCCCCCCC--CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHH
Confidence                      45555555555566666553  346677777777777777777776632222111    12356899999


Q ss_pred             HHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCC------CCh
Q psy817          286 AENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNI------LSV  359 (854)
Q Consensus       286 ~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~------~~~  359 (854)
                      +.+++.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||.|+..|.      .+.
T Consensus       196 ~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~  275 (437)
T PHA02795        196 DEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHL  275 (437)
T ss_pred             HhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999998884      246


Q ss_pred             HHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Q psy817          360 HPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADIS  406 (854)
Q Consensus       360 ~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~  406 (854)
                      +++++|+++|++++..+..   ++..  ...+.++++.+++++..++
T Consensus       276 eIvelLL~~gadI~~~~~~---~~~~--~~~n~~~ik~lI~y~~~ld  317 (437)
T PHA02795        276 KILEILLREPLSIDCIKLA---ILNN--TIENHDVIKLCIKYFMMVD  317 (437)
T ss_pred             HHHHHHHhCCCCCCchhHH---hhhc--ccchHHHHHHHHHHHHhcc
Confidence            8899999999988775432   2211  1236789999998876554

>PHA02795 ankyrin-like protein; Provisional

Probab=99.95  E-value=1.1e-26  Score=247.52  Aligned_cols=188  Identities=16%  Similarity=0.080  Sum_probs=165.9

Q ss_pred             HHHHcCCHHHHHHHHHCCCCCC------CCCCCCCcHHHHHHH--cCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHH
Q psy817          216 SAVSTNAVDCVQLLLSLQINPN------VLNNKGVSPLHIAAD--RGLISCLKAILDSGMADVDIKTKERRVTALHLAAE  287 (854)
Q Consensus       216 ~A~~~~~~~~v~~Ll~~g~~~~------~~d~~g~t~L~~A~~--~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~  287 (854)
                      .|+..+..|+++.|+++|+++|      ..+..++|+||+|+.  .|+.+++++|+++| ++++..+   +.||+|.|+.
T Consensus        83 ~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~G-ADIn~~~---~~t~lh~A~~  158 (437)
T PHA02795         83 LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHG-AVIYKIE---CLNAYFRGIC  158 (437)
T ss_pred             HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCC-CCCCCCC---CCCHHHHHHH
Confidence            5666666777777777777777      677889999999999  89999999999997 9998643   3699999999


Q ss_pred             cCCHHHHHHHHhcCCCcCCCC------CCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHH
Q psy817          288 NGYVECLRILLENHANCNERN------HKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHP  361 (854)
Q Consensus       288 ~g~~~~v~~Ll~~~~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~  361 (854)
                      +|+.+++++|+++|++.....      ..|.+++|.|+..++.+++++|+++|+++|.+|..|.||||.|+..|  +.++
T Consensus       159 ~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g--~~ei  236 (437)
T PHA02795        159 KKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAG--YIDL  236 (437)
T ss_pred             cCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcC--CHHH
Confidence            999999999999998543222      34789999999999999999999999999999999999999999999  8889


Q ss_pred             HHHHHhCCCCCccCCCCCCCHHHHHHHcC--------CHHHHHHHHHcCCCccccC
Q psy817          362 LEILLKWGANVNARDIFGYSPIHIAALSE--------LSQCVDCLIMHGADISSKT  409 (854)
Q Consensus       362 v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~--------~~~~v~~Ll~~ga~~~~~~  409 (854)
                      +++|+++|+++|.+|..|.||||+|+..|        +.+++++|+++|++++...
T Consensus       237 VelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~~  292 (437)
T PHA02795        237 VSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCIK  292 (437)
T ss_pred             HHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCchh
Confidence            99999999999999999999999999998        4699999999999987644

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.95  E-value=2.5e-26  Score=228.84  Aligned_cols=177  Identities=20%  Similarity=0.250  Sum_probs=124.4

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcC--CHHHHHHHHhcCCCcCCCC-CCCCCHHHH
Q psy817          241 NKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENG--YVECLRILLENHANCNERN-HKEQIPLHL  317 (854)
Q Consensus       241 ~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g--~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~  317 (854)
                      ..+.||||.|+..|+.++|+.|++..    +.. +..|.||||+|+.++  +.+++++|+++|++++.++ ..|.||||+
T Consensus        19 ~~~~~pL~~A~~~~~~~~vk~Li~~~----n~~-~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~   93 (209)
T PHA02859         19 YRYCNPLFYYVEKDDIEGVKKWIKFV----NDC-NDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHH   93 (209)
T ss_pred             hccCcHHHHHHHhCcHHHHHHHHHhh----hcc-CccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHH
Confidence            45667777777777777777776542    222 234557777777643  6777777777777777775 367777777


Q ss_pred             HHhc---CCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHH-HHHcCCHH
Q psy817          318 AAKC---QSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHI-AALSELSQ  393 (854)
Q Consensus       318 A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~-A~~~~~~~  393 (854)
                      |+..   ++.+++++|+++|+++|..|..|.||||.|+.....+.+++++|+++|++++.+|..|.||||. |+..++.+
T Consensus        94 a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~  173 (209)
T PHA02859         94 YLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKK  173 (209)
T ss_pred             HHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHH
Confidence            6643   3677777777777777777777777777776644336677777777777777777777777774 45567777


Q ss_pred             HHHHHHHcCCCccccCCCCCCHHHHHHhc
Q psy817          394 CVDCLIMHGADISSKTPSGSSALSIIMRN  422 (854)
Q Consensus       394 ~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~  422 (854)
                      ++++|+++|++++.+|..|.||+++|..+
T Consensus       174 iv~~Ll~~Gadi~~~d~~g~tpl~la~~~  202 (209)
T PHA02859        174 IFDFLTSLGIDINETNKSGYNCYDLIKFR  202 (209)
T ss_pred             HHHHHHHcCCCCCCCCCCCCCHHHHHhhh
Confidence            77777777777777777777777777654

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.95  E-value=2.2e-26  Score=229.23  Aligned_cols=175  Identities=20%  Similarity=0.304  Sum_probs=158.7

Q ss_pred             CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCccccccCCcCcHHHHHHH
Q psy817          210 HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRG--LISCLKAILDSGMADVDIKTKERRVTALHLAAE  287 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g--~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~  287 (854)
                      +.|||+.|+..|+.++|+.|++.   ++..|..|.||||+|+.++  +.+++++|+++| ++++.++...|.||||+|+.
T Consensus        21 ~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~g-advn~~~~~~g~TpLh~a~~   96 (209)
T PHA02859         21 YCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENG-ADVNFKTRDNNLSALHHYLS   96 (209)
T ss_pred             cCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCC-CCCCccCCCCCCCHHHHHHH
Confidence            57999999999999999999985   4667889999999999865  899999999987 99998876678899999876


Q ss_pred             c---CCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHh--cCCHHHHHHHHhCCCCCCCccCCCCcHHHHH-HhcCCCChHH
Q psy817          288 N---GYVECLRILLENHANCNERNHKEQIPLHLAAK--CQSVECMEMLLRKGSQVNASDCDNRTPLHAS-LSKNILSVHP  361 (854)
Q Consensus       288 ~---g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~--~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a-~~~~~~~~~~  361 (854)
                      .   ++.+++++|+++|++++.+|..|.||||.|+.  .++.+++++|+++|++++.+|..|.||||.+ +..+  +.++
T Consensus        97 ~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~--~~~i  174 (209)
T PHA02859         97 FNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHS--DKKI  174 (209)
T ss_pred             hCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcC--CHHH
Confidence            4   57999999999999999999999999999876  4689999999999999999999999999965 4455  7889


Q ss_pred             HHHHHhCCCCCccCCCCCCCHHHHHHHcC
Q psy817          362 LEILLKWGANVNARDIFGYSPIHIAALSE  390 (854)
Q Consensus       362 v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~  390 (854)
                      +++|+++|++++.+|..|.|||++|+.++
T Consensus       175 v~~Ll~~Gadi~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        175 FDFLTSLGIDINETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             HHHHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence            99999999999999999999999998765

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.94  E-value=9.1e-24  Score=252.49  Aligned_cols=237  Identities=18%  Similarity=0.105  Sum_probs=160.8

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHc--CCCCC---CCCccHHH-HHHHcCCHHHHHHHHhCCCCccccCCCccHHHHHHhCC
Q psy817          121 KTTALLWCVFVKREDLLDALHQL--GADLS---NDKYGALH-LAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGN  194 (854)
Q Consensus       121 ~~t~L~~Aa~~g~~~iv~~Ll~~--g~~~~---~~g~t~L~-~A~~~g~~~iv~~Ll~~g~~~~~~~~g~t~L~~A~~~~  194 (854)
                      +..+++.||..|+.+.++.+++.  +.++|   ..|+|||| .|+.+++.++++.|+++|+   ..+.|.||||.|+.+ 
T Consensus        17 ~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~---~~~~G~T~Lh~A~~~-   92 (743)
T TIGR00870        17 EEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC---RGAVGDTLLHAISLE-   92 (743)
T ss_pred             HHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC---CCCcChHHHHHHHhc-
Confidence            34555555555555555555555  44443   24555555 5555555555555555554   122355555555542 


Q ss_pred             CHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCC----------CCCCCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy817          195 YVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQIN----------PNVLNNKGVSPLHIAADRGLISCLKAILD  264 (854)
Q Consensus       195 ~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~----------~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~  264 (854)
                      +.+.++.                       +++.+.+.+.+          ....+..|.||||+|+.+|+.++++.|++
T Consensus        93 ~~~~v~~-----------------------ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~  149 (743)
T TIGR00870        93 YVDAVEA-----------------------ILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLE  149 (743)
T ss_pred             cHHHHHH-----------------------HHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHh
Confidence            1122222                       22222222211          12234579999999999999999999999


Q ss_pred             cCCCCcccccc-------------CCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcC---------
Q psy817          265 SGMADVDIKTK-------------ERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQ---------  322 (854)
Q Consensus       265 ~~~~~~~~~~~-------------~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~---------  322 (854)
                      +| ++++.+..             ..|.||||.|+..|+.+++++|+++|+|++.+|..|+||||+|+..+         
T Consensus       150 ~G-Adv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l  228 (743)
T TIGR00870       150 RG-ASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEEL  228 (743)
T ss_pred             CC-CCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHH
Confidence            86 88886532             24779999999999999999999999999999999999999999887         


Q ss_pred             CHHHHHHHHhCCCCC-------CCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHH
Q psy817          323 SVECMEMLLRKGSQV-------NASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAA  387 (854)
Q Consensus       323 ~~~~v~~Ll~~g~~~-------~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~  387 (854)
                      ...+.+++++.++..       +..|.+|.||||.|+..|  +.++++.+++.+.+.......++.|.+.+.
T Consensus       229 ~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g--~~~l~~lLL~~~~~~kk~~a~~~~~~~~~~  298 (743)
T TIGR00870       229 SCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEG--RIVLFRLKLAIKYKQKKFVAWPNGQQLLSL  298 (743)
T ss_pred             HHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcC--CccHHHHHHHHHHhcceeeccCcchHhHhh
Confidence            234556666655543       567899999999999999  677799999977665555556667776553

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>PLN03223 Polycystin cation channel protein; Provisional

Probab=99.93  E-value=1e-24  Score=247.44  Aligned_cols=225  Identities=13%  Similarity=0.201  Sum_probs=174.0

Q ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHhhhh----hhhhhhhhhchhhHHHHHHHHHHHHHHHhccC---------------
Q psy817          557 NPDFMETVWYVLALLATIELIRKIFGLVE----YASFREYCSHVTNLFEWYMIISVFLISCVYTK---------------  617 (854)
Q Consensus       557 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~----~~~~~~y~~~~wN~~d~~~~~~~~~~~~~~~~---------------  617 (854)
                      ...+...++++++++.++.+++|+.++..    .++++.||+++|||+|++.+++.++.+..+..               
T Consensus      1171 ~DyfvLacEIIFVLFILYfIyrEIkEI~k~KK~RG~~laYFKSfWNwLEIl~IlLS~AAIvLYFvf~~~~astf~~dIry 1250 (1634)
T PLN03223       1171 EDWVRFAMEILLAIGAVYSVYEEAMDFGSSKKTRGSYLAYFLSGWNYVDFASIGLHLATIMMWFVFSWSYARAFEPDIHY 1250 (1634)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhh
Confidence            34566777888888888888888887742    23468999999999999888665543322100               


Q ss_pred             -----cc--------------------c----------chhhhHHHHHHHHHHHHHHHHHcccCccchHHHHHHHHHHHH
Q psy817          618 -----RT--------------------Y----------IWQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEF  662 (854)
Q Consensus       618 -----~~--------------------~----------~~~~~~~a~~~~l~~~~ll~~~~~~~~~G~~v~m~~~~~~d~  662 (854)
                           ..                    +          .|-..+.++.++++|+|++++++++|.++.+...+.+...|+
T Consensus      1251 nIYK~ls~sa~fl~Lq~pg~l~d~nd~F~sf~~La~~~q~Y~aL~GIlIFLsiLKfLRLLRFNPrL~vLt~TLrrAapDL 1330 (1634)
T PLN03223       1251 DIYKNLSASANFTALRIPNELPEMNDMFLEMKNLVDYFQWYMTLSGINIILLLGRILKLMDFQPRLGVITRTLWLAGADL 1330 (1634)
T ss_pred             hhhhhhhhhcchhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHH
Confidence                 00                    0          011125577899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCC-CccCChHHHHHHHHHHHhcCcchhhhhccCCCCCccccchhHHHHHHHHHHHHH
Q psy817          663 LKLFQAYICLLVGFTLTFCIVFPSE-DRFQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLFVT  741 (854)
Q Consensus       663 ~~f~~i~~~~l~aF~~~f~~l~~~~-~~f~~~~~s~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ilf~~f~~~~~  741 (854)
                      +.|+++|+++++||++..+++|+.. +.|+++..|++++|+|++|++++......   ......+++|+++|++|++++.
T Consensus      1331 a~F~IIF~IVF~AFAqLG~LLFGt~ve~FSTf~sSL~TLFqMLLGDfdYF~eDLk---~l~e~nrVLGPIYFfSFILLV~ 1407 (1634)
T PLN03223       1331 MHFFVIFGMVFVGYAFIGHVIFGNASVHFSDMTDSINSLFENLLGDITYFNEDLK---NLTGLQFVVGMIYFYSYNIFVF 1407 (1634)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCchhhcCHHHHHHHHHHHHHcCchHHHHHHH---hhhcccchHHHHHHHHHHHHHH
Confidence            9999999999999999999999875 57999999999999999999985211111   1223346899999999999999


Q ss_pred             HHHHHHHHHHHHhhHHHHHhhhh--HHHHHHHHHHHHHHHHHhhc
Q psy817          742 VVLMNLLVGIAVQDIQGLHKTAG--LDKLVRQTELIHSLELALFQ  784 (854)
Q Consensus       742 ivLlNlLIA~~~~~~~~v~~~a~--~~~~~~~~~~i~~~e~~l~~  784 (854)
                      +|||||+|||++++|++|+++..  ..--.+-.+++..-=+.+++
T Consensus      1408 FILLNMFIAII~DSFsEVK~d~seq~s~e~EIvDfm~~rfrslL~ 1452 (1634)
T PLN03223       1408 MILFNFLLAIICDAFGEVKANAAETVSVHTELFPMLRDKWRSMFK 1452 (1634)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHh
Confidence            99999999999999999988753  23455666666655555543

>KOG0502|consensus

Probab=99.93  E-value=7.8e-26  Score=207.49  Aligned_cols=233  Identities=27%  Similarity=0.340  Sum_probs=177.5

Q ss_pred             cccCCcHHHHHHHcCCHHHHHHHHHcCCCC----CCCCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHh
Q psy817          118 QAEKTTALLWCVFVKREDLLDALHQLGADL----SNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVL  192 (854)
Q Consensus       118 ~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~----~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~  192 (854)
                      +..|.+-+-.|...|+.+++..+..-.++.    +.+|+++++.|+-.|+.+.+..++.+|+..|..+ -+++|+.+++.
T Consensus        59 ~~lge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVh  138 (296)
T KOG0502|consen   59 NALGESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVH  138 (296)
T ss_pred             HhcCCcccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHH
Confidence            344555566666666666666555443332    1256666666666666666666666666655433 25556655555


Q ss_pred             CCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccc
Q psy817          193 GNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDI  272 (854)
Q Consensus       193 ~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~  272 (854)
                      ..                           +.+.+..+.++  .+|..|+.|.|||.+|+..|++++|++|++.| ++++.
T Consensus       139 ql---------------------------~L~~~~~~~~n--~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~G-Adp~~  188 (296)
T KOG0502|consen  139 QL---------------------------HLDVVDLLVNN--KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSG-ADPDA  188 (296)
T ss_pred             HH---------------------------HHHHHHHHhhc--cccCccccCchHhHHHHhcCchHHHHHHHHcC-CChhh
Confidence            44                           44444444332  46788999999999999999999999999987 88887


Q ss_pred             cccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHH
Q psy817          273 KTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASL  352 (854)
Q Consensus       273 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~  352 (854)
                      -..... ++|.+|++.|+.++|++|++.+.|+|..|.+|-|||.+|++.|+.++++.|++.|++++..+..|++++..|+
T Consensus       189 lgk~re-sALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAV  267 (296)
T KOG0502|consen  189 LGKYRE-SALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAV  267 (296)
T ss_pred             hhhhhh-hhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHH
Confidence            665444 9999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCChHHHHHHHhCCCCCccCCCCCCCHHH
Q psy817          353 SKNILSVHPLEILLKWGANVNARDIFGYSPIH  384 (854)
Q Consensus       353 ~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~  384 (854)
                      ..|+.   +++..+++.++.+.+|+...||+|
T Consensus       268 alGyr---~Vqqvie~h~lkl~Q~~~~~~~~~  296 (296)
T KOG0502|consen  268 ALGYR---IVQQVIEKHALKLCQDSEKRTPLH  296 (296)
T ss_pred             HhhhH---HHHHHHHHHHHHHhhcccCCCCCC
Confidence            99853   688888888888888887777765

>KOG4369|consensus

Probab=99.92  E-value=8.6e-26  Score=248.39  Aligned_cols=282  Identities=19%  Similarity=0.181  Sum_probs=255.5

Q ss_pred             cccccCCcHHHHHHHcCCHHHHHHHHHcCCCCCC----CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHH
Q psy817          116 ASQAEKTTALLWCVFVKREDLLDALHQLGADLSN----DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFA  190 (854)
Q Consensus       116 ~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~----~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A  190 (854)
                      .+|..|.+||..|+..||..+|+.|+++.++++.    .+.|+|-+||..|..++|++||.+|++-..++ ...|||..|
T Consensus       785 hrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankehrnvsDytPlsla  864 (2131)
T KOG4369|consen  785 HRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLA  864 (2131)
T ss_pred             ccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhccccccchhhcCchhhh
Confidence            4688899999999999999999999999988855    88999999999999999999999999866555 479999999


Q ss_pred             HhCCCHHHHHHHHhCCCCC--------CchHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHH
Q psy817          191 VLGNYVDCAKFLIKNKAHI--------HETIVHSAVSTNAVDCVQLLLSLQINPNVLN-NKGVSPLHIAADRGLISCLKA  261 (854)
Q Consensus       191 ~~~~~~~iv~~Ll~~~~~~--------~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d-~~g~t~L~~A~~~g~~~iv~~  261 (854)
                      ...|..++++.|+.+|+++        |-+||++|..+||-+.++.|++.|-|+|..- -+-+|+|-+|+-.|+.+++.+
T Consensus       865 ~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~l  944 (2131)
T KOG4369|consen  865 RSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFL  944 (2131)
T ss_pred             cCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhccccccccccceeeccccCcchHHHH
Confidence            9999999999999999877        6789999999999999999999999998754 356789999999999999999


Q ss_pred             HHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCC--CCCCCHHHHHHhcCCHHHHHHHHhCCCCCCC
Q psy817          262 ILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERN--HKEQIPLHLAAKCQSVECMEMLLRKGSQVNA  339 (854)
Q Consensus       262 Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~  339 (854)
                      ||... +++..+. ..|.|||+-++..|++|+=++|+..|+|.|...  ....|+|..++..||.+.++.|+...+.+..
T Consensus       945 LLa~~-anvehRa-ktgltplme~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv~v 1022 (2131)
T KOG4369|consen  945 LLAAQ-ANVEHRA-KTGLTPLMEMASGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATVRV 1022 (2131)
T ss_pred             HHHHh-hhhhhhc-ccCCcccchhhcCCccccchhhhhcccccccCCCCCcCCccceeecCCCchhhhHHhhCCccceec
Confidence            99976 7777665 467899999999999999999999999987543  2345899999999999999999999999999


Q ss_pred             ccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q psy817          340 SDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMH  401 (854)
Q Consensus       340 ~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~  401 (854)
                      ++++|+|+|..|+..|  .+..+..|+++++|++..|+...++++-|.+.|+.+||++....
T Consensus      1023 ~NkkG~T~Lwla~~Gg--~lss~~il~~~~ad~d~qdnr~~S~~maafRKgh~~iVk~mv~~ 1082 (2131)
T KOG4369|consen 1023 PNKKGCTVLWLASAGG--ALSSCPILVSSVADADQQDNRTNSRTMAAFRKGHFAIVKKMVPP 1082 (2131)
T ss_pred             ccCCCCcccchhccCC--ccccchHHhhcccChhhhhcccccccHHHHHhchhheeccccCc
Confidence            9999999999999999  55669999999999999999999999999999999999988754

>KOG0502|consensus

Probab=99.92  E-value=2.7e-25  Score=204.02  Aligned_cols=199  Identities=24%  Similarity=0.255  Sum_probs=155.5

Q ss_pred             chHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCC
Q psy817          211 ETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGY  290 (854)
Q Consensus       211 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~  290 (854)
                      .++++.|+-.++.+.+..++.+|+..|..+--+.+|+.+++...+++.+..+.++.   +|..+ +.|.|||.+|+..|+
T Consensus        97 ~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhql~L~~~~~~~~n~---VN~~D-e~GfTpLiWAaa~G~  172 (296)
T KOG0502|consen   97 WSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNNK---VNACD-EFGFTPLIWAAAKGH  172 (296)
T ss_pred             hhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHHHHHHHHHHHhhcc---ccCcc-ccCchHhHHHHhcCc
Confidence            33344444444555555666666667777888888888888888888887777643   66544 567788888888888


Q ss_pred             HHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCC
Q psy817          291 VECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGA  370 (854)
Q Consensus       291 ~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~  370 (854)
                      +++|++|++.|++++...+...++|.+|+..|..++|++|++++.|+|..|-+|.|||-+|++.+  ++++++.|++.|+
T Consensus       173 i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgn--hvkcve~Ll~sGA  250 (296)
T KOG0502|consen  173 IPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGN--HVKCVESLLNSGA  250 (296)
T ss_pred             hHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCC--hHHHHHHHHhcCC
Confidence            88888888888888888888888888888888888888888888888888888888888888888  7778888888888


Q ss_pred             CCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHH
Q psy817          371 NVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSAL  416 (854)
Q Consensus       371 d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l  416 (854)
                      |++..+..|++++..|+..|+. +|+..+++-++...+|+.-.+|+
T Consensus       251 d~t~e~dsGy~~mdlAValGyr-~Vqqvie~h~lkl~Q~~~~~~~~  295 (296)
T KOG0502|consen  251 DVTQEDDSGYWIMDLAVALGYR-IVQQVIEKHALKLCQDSEKRTPL  295 (296)
T ss_pred             CcccccccCCcHHHHHHHhhhH-HHHHHHHHHHHHHhhcccCCCCC
Confidence            8888888888888888888877 77777777776666666655554

>KOG0507|consensus

Probab=99.90  E-value=2.8e-23  Score=223.50  Aligned_cols=230  Identities=25%  Similarity=0.316  Sum_probs=191.9

Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCC-----C--------C---CCCCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCcc
Q psy817          123 TALLWCVFVKREDLLDALHQLGA-----D--------L---SNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYT  185 (854)
Q Consensus       123 t~L~~Aa~~g~~~iv~~Ll~~g~-----~--------~---~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t  185 (854)
                      +-|.-|+..|+.+.+..|++...     -        .   |.+|.|+||.||.+|+.+++++|+++.+-++..+ .|.+
T Consensus         5 qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~   84 (854)
T KOG0507|consen    5 QELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGIL   84 (854)
T ss_pred             hhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcc
Confidence            44677888999999999887521     0        1   1179999999999999999999999987666544 6899


Q ss_pred             HHHHHHhCCCHHHHHHHHhCCCCC------CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q psy817          186 PLHFAVLGNYVDCAKFLIKNKAHI------HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCL  259 (854)
Q Consensus       186 ~L~~A~~~~~~~iv~~Ll~~~~~~------~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv  259 (854)
                      |||+|+.+|+.|+++.|+.+++..      |.||||.|+..||.+++.+|+++|+|+-..|+.+.|+|..|++.|..+++
T Consensus        85 plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vv  164 (854)
T KOG0507|consen   85 PLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVV  164 (854)
T ss_pred             eEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHH
Confidence            999999999999999999888554      78999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCc-------cccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHh
Q psy817          260 KAILDSGMADV-------DIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLR  332 (854)
Q Consensus       260 ~~Ll~~~~~~~-------~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~  332 (854)
                      +.|+... -++       .......+.+|||.|+++||.++++.|++.|.++|.....| |+||.|+.+|..+++..|++
T Consensus       165 q~ll~~~-~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t~~g-talheaalcgk~evvr~ll~  242 (854)
T KOG0507|consen  165 QMLLQKK-FPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLLE  242 (854)
T ss_pred             HHHhhhc-cchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHHh
Confidence            9998763 111       11122345688999999999999999999999988777666 78999999999999999999


Q ss_pred             CCCCCCCccCCCCcHHHHHHhc
Q psy817          333 KGSQVNASDCDNRTPLHASLSK  354 (854)
Q Consensus       333 ~g~~~~~~~~~g~t~L~~a~~~  354 (854)
                      .|.+.+.++.+|+|+|.+....
T Consensus       243 ~gin~h~~n~~~qtaldil~d~  264 (854)
T KOG0507|consen  243 IGINTHIKNQHGQTALDIIIDL  264 (854)
T ss_pred             hccccccccccchHHHHHHHhc
Confidence            9999999999999998876654

>KOG0507|consensus

Probab=99.89  E-value=5e-23  Score=221.63  Aligned_cols=238  Identities=29%  Similarity=0.358  Sum_probs=164.3

Q ss_pred             HHHHHHHcCCHHHHHHHHhCCC-------------CccccC-CCccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHH
Q psy817          154 ALHLAAFNGSIKGCSWLMLHGH-------------DINFTK-DSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVS  219 (854)
Q Consensus       154 ~L~~A~~~g~~~iv~~Ll~~g~-------------~~~~~~-~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~  219 (854)
                      -|--|++.|+.+.+..|+++.-             ++|.++ +|.|+||.|+.+|+.                       
T Consensus         6 el~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~-----------------------   62 (854)
T KOG0507|consen    6 ELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQN-----------------------   62 (854)
T ss_pred             hHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCch-----------------------
Confidence            4667888888888888887521             111112 245555555555554                       


Q ss_pred             cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHh
Q psy817          220 TNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLE  299 (854)
Q Consensus       220 ~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~  299 (854)
                          ++++.|+++.+-++..|..|.+|||+|+.+|+.++++.++.++ ..+|..+.+ |.||||.|+..||.+++.+|+.
T Consensus        63 ----~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~-d~~na~~~e-~~tplhlaaqhgh~dvv~~Ll~  136 (854)
T KOG0507|consen   63 ----QISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQT-DILNAVNIE-NETPLHLAAQHGHLEVVFYLLK  136 (854)
T ss_pred             ----HHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcc-cCCCccccc-CcCccchhhhhcchHHHHHHHh
Confidence                4455555544445556667777777777777777777777766 555555543 3477777777777777777777


Q ss_pred             cCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCC--------CCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCC
Q psy817          300 NHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQV--------NASDCDNRTPLHASLSKNILSVHPLEILLKWGAN  371 (854)
Q Consensus       300 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--------~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d  371 (854)
                      +|+|+..+|..+.|++.+|++-|..++++.|++.....        ..++-.+-+|+|.|+++|  ++++++.|++.|.|
T Consensus       137 ~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakng--h~~~~~~ll~ag~d  214 (854)
T KOG0507|consen  137 KNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNG--HVECMQALLEAGFD  214 (854)
T ss_pred             cCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcc--hHHHHHHHHhcCCC
Confidence            77777777777777777777777777777777652211        233445677888888888  67778888888888


Q ss_pred             CccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcC
Q psy817          372 VNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNT  423 (854)
Q Consensus       372 ~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~  423 (854)
                      +|.....| |+||.|+..|..++|.+|++.|.+.+.++.+|.|+|++.....
T Consensus       215 in~~t~~g-talheaalcgk~evvr~ll~~gin~h~~n~~~qtaldil~d~~  265 (854)
T KOG0507|consen  215 INYTTEDG-TALHEAALCGKAEVVRFLLEIGINTHIKNQHGQTALDIIIDLQ  265 (854)
T ss_pred             cccccccc-hhhhhHhhcCcchhhhHHHhhccccccccccchHHHHHHHhcc
Confidence            88777555 7888888888888888888888888888888888888776543

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.89  E-value=4e-22  Score=239.26  Aligned_cols=193  Identities=24%  Similarity=0.303  Sum_probs=168.8

Q ss_pred             CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhc
Q psy817          221 NAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLEN  300 (854)
Q Consensus       221 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~  300 (854)
                      +..++-..+.+.+..  ..+.++.++|+.||..|+.++++.|++.| +++|..+ ..|.||||+|+.+|+.+++++|+++
T Consensus       505 ~~l~v~~ll~~~~~~--~~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G-~d~n~~d-~~G~TpLh~Aa~~g~~~~v~~Ll~~  580 (823)
T PLN03192        505 HDLNVGDLLGDNGGE--HDDPNMASNLLTVASTGNAALLEELLKAK-LDPDIGD-SKGRTPLHIAASKGYEDCVLVLLKH  580 (823)
T ss_pred             ccccHHHHHhhcccc--cCCccchhHHHHHHHcCCHHHHHHHHHCC-CCCCCCC-CCCCCHHHHHHHcChHHHHHHHHhc
Confidence            344444555554433  23456778999999999999999999886 8999876 4577999999999999999999999


Q ss_pred             CCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCC
Q psy817          301 HANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGY  380 (854)
Q Consensus       301 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~  380 (854)
                      |++++.+|..|.||||.|+..|+.+++++|++.++..+  ...|.++||.|+.+|  +.++++.|+++|+|+|.+|..|.
T Consensus       581 gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~--~~~~~~~L~~Aa~~g--~~~~v~~Ll~~Gadin~~d~~G~  656 (823)
T PLN03192        581 ACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISD--PHAAGDLLCTAAKRN--DLTAMKELLKQGLNVDSEDHQGA  656 (823)
T ss_pred             CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccC--cccCchHHHHHHHhC--CHHHHHHHHHCCCCCCCCCCCCC
Confidence            99999999999999999999999999999999887654  345779999999999  88899999999999999999999


Q ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCccccCCCC-CCHHHHHHh
Q psy817          381 SPIHIAALSELSQCVDCLIMHGADISSKTPSG-SSALSIIMR  421 (854)
Q Consensus       381 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g-~t~l~~a~~  421 (854)
                      ||||+|+..|+.+++++|+++|+|++.+|..| .||++.+..
T Consensus       657 TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~~  698 (823)
T PLN03192        657 TALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTELREL  698 (823)
T ss_pred             CHHHHHHHCCcHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Confidence            99999999999999999999999999999988 899887643

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.88  E-value=9.6e-22  Score=236.00  Aligned_cols=189  Identities=25%  Similarity=0.381  Sum_probs=164.7

Q ss_pred             CHHHHHHHHhCCCCC----CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc
Q psy817          195 YVDCAKFLIKNKAHI----HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADV  270 (854)
Q Consensus       195 ~~~iv~~Ll~~~~~~----~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~  270 (854)
                      ..++-+.+.+.++..    +.++|+.||..|+.++++.|+++|+|+|..|.+|.||||+|+.+|+.++++.|+++| +++
T Consensus       506 ~l~v~~ll~~~~~~~~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~g-adi  584 (823)
T PLN03192        506 DLNVGDLLGDNGGEHDDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHA-CNV  584 (823)
T ss_pred             cccHHHHHhhcccccCCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcC-CCC
Confidence            344555555555433    468899999999999999999999999999999999999999999999999999986 889


Q ss_pred             cccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHH
Q psy817          271 DIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHA  350 (854)
Q Consensus       271 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~  350 (854)
                      +.++. .|.||||.|+..|+.+++++|++.++..+  ...|.++||.|+..|+.++++.|+++|+++|..|.+|+||||.
T Consensus       585 n~~d~-~G~TpL~~A~~~g~~~iv~~L~~~~~~~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~  661 (823)
T PLN03192        585 HIRDA-NGNTALWNAISAKHHKIFRILYHFASISD--PHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQV  661 (823)
T ss_pred             CCcCC-CCCCHHHHHHHhCCHHHHHHHHhcCcccC--cccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence            88764 56799999999999999999998877644  3457789999999999999999999999999999999999999


Q ss_pred             HHhcCCCChHHHHHHHhCCCCCccCCCCC-CCHHHHHHHc
Q psy817          351 SLSKNILSVHPLEILLKWGANVNARDIFG-YSPIHIAALS  389 (854)
Q Consensus       351 a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g-~t~L~~A~~~  389 (854)
                      |+..|  +.+++++|+++|+|++..|..| .||+.++...
T Consensus       662 A~~~g--~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~~~  699 (823)
T PLN03192        662 AMAED--HVDMVRLLIMNGADVDKANTDDDFSPTELRELL  699 (823)
T ss_pred             HHHCC--cHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHH
Confidence            99999  7888999999999999999888 8998877553

>KOG0505|consensus

Probab=99.85  E-value=2.8e-21  Score=201.79  Aligned_cols=205  Identities=27%  Similarity=0.417  Sum_probs=165.9

Q ss_pred             HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHH
Q psy817          214 VHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVEC  293 (854)
Q Consensus       214 L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~  293 (854)
                      +.-|+..|..+-|+.|+..|+++|..+.+|.|+||.|+...+.+||++|++++ +++|..+ ..++||||.|+.+||.++
T Consensus        44 ~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~g-a~Vn~~d-~e~wtPlhaaascg~~~i  121 (527)
T KOG0505|consen   44 FLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENG-ANVNAQD-NEGWTPLHAAASCGYLNI  121 (527)
T ss_pred             HHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhc-CCccccc-cccCCcchhhcccccHHH
Confidence            44566777788888888888888888888888888888888888888888876 7788765 456688888888888888


Q ss_pred             HHHHHhcCCCcCCCCCCCCCHHHHHHhcCCH--------------------------HHHHHHHhCCCCCCCccCCCCcH
Q psy817          294 LRILLENHANCNERNHKEQIPLHLAAKCQSV--------------------------ECMEMLLRKGSQVNASDCDNRTP  347 (854)
Q Consensus       294 v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~--------------------------~~v~~Ll~~g~~~~~~~~~g~t~  347 (854)
                      +++|+.+|+++...+.+|..|..++......                          +-+...+..|.+.+..+..|.|+
T Consensus       122 ~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~  201 (527)
T KOG0505|consen  122 VEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATA  201 (527)
T ss_pred             HHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchH
Confidence            8888888887777776666665443211111                          11233344788888888889999


Q ss_pred             HHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhc
Q psy817          348 LHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRN  422 (854)
Q Consensus       348 L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~  422 (854)
                      ||.|+.+|  ..++.++|+++|.+++.+|.+|+||||.|+.-|..+++++|+++|++++..+..|.+|++.+...
T Consensus       202 lHvAaa~G--y~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~dee  274 (527)
T KOG0505|consen  202 LHVAAANG--YTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADEE  274 (527)
T ss_pred             HHHHHhhh--HHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhhh
Confidence            99999999  77889999999999999999999999999999999999999999999999999999999988654

>PF08016 PKD_channel: Polycystin cation channel; InterPro: IPR013122 Polycystic kidney diseases (PKD) are disorders characterised by large numbers of cysts distributed throughout grossly-enlarged kidneys

Probab=99.84  E-value=4.4e-20  Score=205.12  Aligned_cols=191  Identities=18%  Similarity=0.290  Sum_probs=159.0

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhchhhHHHHHHHHHHHHHHHhccCc-----------------ccc
Q psy817          559 DFMETVWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKR-----------------TYI  621 (854)
Q Consensus       559 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~y~~~~wN~~d~~~~~~~~~~~~~~~~~-----------------~~~  621 (854)
                      .+..+++++++++.++...+|+.++.  +.++.||++.||++|++++++.++++..+...                 ..+
T Consensus       208 ~~~~~~~i~f~~~~l~~~~~ei~~i~--~~g~~y~~~~WN~~e~~ii~ls~~~i~~~~~~~~~~~~~~~~~~~~~~~fv~  285 (425)
T PF08016_consen  208 YFVLLCEILFVLFVLYFLYREIKKIR--REGRAYFKSFWNWLELLIILLSLAVIVLYFYRMILASEALKQYRENPRSFVD  285 (425)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHH--HhhhHHhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccCC
Confidence            34555577777778888888888873  33489999999999998876544332221100                 000


Q ss_pred             ---------hhhhHHHHHHHHHHHHHHHHHcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CccC
Q psy817          622 ---------WQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSE-DRFQ  691 (854)
Q Consensus       622 ---------~~~~~~a~~~~l~~~~ll~~~~~~~~~G~~v~m~~~~~~d~~~f~~i~~~~l~aF~~~f~~l~~~~-~~f~  691 (854)
                               ....+.|+.+++.|+|+++++|.++.++.+..++.++.+++..|+++++++++|||.+++++|++. +.|+
T Consensus       286 f~~~a~~~~~~~~l~a~~vfl~~lrll~~l~f~~~~~~~~~tl~~a~~~l~~f~~~~~i~~~~fa~~g~l~fG~~~~~f~  365 (425)
T PF08016_consen  286 FQELAQWDQLYRYLLAFLVFLLWLRLLKLLRFNRRLSLLSRTLRRAAKDLLGFFVIFLIIFLAFAQAGYLLFGSYSEDFS  365 (425)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhheeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccC
Confidence                     224578999999999999999999999999999999999999999999999999999999999875 6899


Q ss_pred             ChHHHHHHHHHHHhcCcchhhhhccCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q psy817          692 NPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGL  759 (854)
Q Consensus       692 ~~~~s~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ilf~~f~~~~~ivLlNlLIA~~~~~~~~v  759 (854)
                      ++..|+.+++.|+.|+++++++..        ..++++.++|++|++++.++|+||+|||+.++|++|
T Consensus       366 s~~~s~~tl~~~l~g~~~~~~~~~--------~~~~lg~l~~~~~~~~~~~illNl~iaIi~~~y~~V  425 (425)
T PF08016_consen  366 SFSSSLVTLFRMLLGDFDYDELYQ--------ANPVLGPLFFFSFMFLVFFILLNLFIAIINDSYEEV  425 (425)
T ss_pred             CHHHHHHHHHHHhcCCCchhhhhc--------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            999999999999999999986532        235789999999999999999999999999999986

Cyst development is associated with impairment of kidney function, and ultimately kidney failure and death []. Most cases of autosomal dominant PKD result from mutations in the PKD1 gene that cause premature protein termination. A second gene for autosomal dominant polycystic kidney disease has been identified by positional cloning []. The predicted 968-amino acid sequence of the PKD2 gene product (polycystin-2) contains 6 transmembrane domains, with intracellular N- and C-termini. Polycystin-2 shares some similarity with the family of voltage-activated calcium (and sodium) channels, and contains a potential calcium-binding domain. Polycystin-2 is strongly expressed in ovary, foetal and adult kidney, testis, and small intestine. Polycystin-1 requires the presence of this protein for stable expression and is believed to interact with it via its C terminus. All mutations between exons 1 and 11 result in a truncated polycystin-2 that lacks a calcium-binding EF-hand domain and the cytoplasmic domains required for the interaction of polycystin-2 with polycystin-1 []. PKD2, although clinically milder than PKD1, has a deleterious impact on life expectancy. This entry contains proteins belonging to the polycystin family including Mucolipin and Polycystin-1 and -2 (PKD1 and PKD2). The domain contains the cation channel region of PKD1 and PKD2 proteins. PKD1 and PKD2 may function through a common signalling pathway that is necessary for normal tubulogenesis. The PKD2 gene product has six transmembrane spans with intracellular amino- and carboxyl-termini []. Mucolipin is a cationic channel which probably plays a role in the endocytic pathway and in the control of membrane trafficking of proteins and lipids. It could play a major role in the calcium ion transport regulating lysosomal exocytosis [, , ].

>KOG0514|consensus

Probab=99.84  E-value=1e-20  Score=187.11  Aligned_cols=161  Identities=25%  Similarity=0.330  Sum_probs=99.3

Q ss_pred             CCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHc-----CCHHHHHHHHhcCCCcCCCC-CC
Q psy817          237 NVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAEN-----GYVECLRILLENHANCNERN-HK  310 (854)
Q Consensus       237 ~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~-----g~~~~v~~Ll~~~~~~~~~~-~~  310 (854)
                      |..|.+|.|+||||+..++.++|+.||+.+-+++|.++ .-|+||+++|+-.     .+.++|..|..-| |+|.+- ..
T Consensus       262 NlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qN-rAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~  339 (452)
T KOG0514|consen  262 NLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQN-RAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQH  339 (452)
T ss_pred             hhhcCCCCeeeeeeecccchHHHHHHhccCcccccccc-cccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhh
Confidence            45566666666666666666666666666666666543 3455666665532     3455666665544 344432 35


Q ss_pred             CCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhC-CCCCccCCCCCCCHHHHHHHc
Q psy817          311 EQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKW-GANVNARDIFGYSPIHIAALS  389 (854)
Q Consensus       311 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~-g~d~n~~d~~g~t~L~~A~~~  389 (854)
                      |+|+|++|+.+|+.++++.||..|+|+|.+|.+|-|+|++|+++|  +.+++++|+.. ++|+...|.+|.|+|.+|...
T Consensus       340 gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHG--hkEivklLLA~p~cd~sLtD~DgSTAl~IAlea  417 (452)
T KOG0514|consen  340 GQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHG--HKEIVKLLLAVPSCDISLTDVDGSTALSIALEA  417 (452)
T ss_pred             cchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhC--hHHHHHHHhccCcccceeecCCCchhhhhHHhc
Confidence            666666666666666666666666666666666666666666666  55666666653 456666777777777777777


Q ss_pred             CCHHHHHHHHHc
Q psy817          390 ELSQCVDCLIMH  401 (854)
Q Consensus       390 ~~~~~v~~Ll~~  401 (854)
                      |+.||.-+|-.|
T Consensus       418 gh~eIa~mlYa~  429 (452)
T KOG0514|consen  418 GHREIAVMLYAH  429 (452)
T ss_pred             CchHHHHHHHHH
Confidence            777777666554

>KOG0514|consensus

Probab=99.84  E-value=1.1e-20  Score=186.76  Aligned_cols=152  Identities=27%  Similarity=0.315  Sum_probs=118.4

Q ss_pred             CCCCccHHHHHHHcCCHHHHHHHHhCC-CCccccCC-CccHHHHHHhC-----CCHHHHHHHHhCCCCC------CchHH
Q psy817          148 SNDKYGALHLAAFNGSIKGCSWLMLHG-HDINFTKD-SYTPLHFAVLG-----NYVDCAKFLIKNKAHI------HETIV  214 (854)
Q Consensus       148 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g-~~~~~~~~-g~t~L~~A~~~-----~~~~iv~~Ll~~~~~~------~~t~L  214 (854)
                      |.+|+|+||||+.+++.++|+.||+.| +|+|..+. |+||++.|+..     .+.++|..|.+-|.-.      |+|+|
T Consensus       265 DsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~gQTAL  344 (452)
T KOG0514|consen  265 DSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHGQTAL  344 (452)
T ss_pred             cCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhcchhh
Confidence            348999999999999999999999987 67877664 89999988853     4667777777766433      77888


Q ss_pred             HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHH
Q psy817          215 HSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECL  294 (854)
Q Consensus       215 ~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v  294 (854)
                      ++|+..|..++|+.|+..|+|+|.+|.+|-|+|++|++.||.|++++||....+++...+. .|.|+|..|...||-|+.
T Consensus       345 MLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~-DgSTAl~IAleagh~eIa  423 (452)
T KOG0514|consen  345 MLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDV-DGSTALSIALEAGHREIA  423 (452)
T ss_pred             hhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecC-CCchhhhhHHhcCchHHH
Confidence            8888888888888888888888888888888888888888888888888877777776554 445888888888887777


Q ss_pred             HHHHhc
Q psy817          295 RILLEN  300 (854)
Q Consensus       295 ~~Ll~~  300 (854)
                      -.|..+
T Consensus       424 ~mlYa~  429 (452)
T KOG0514|consen  424 VMLYAH  429 (452)
T ss_pred             HHHHHH
Confidence            666543

>KOG0505|consensus

Probab=99.84  E-value=1.3e-20  Score=196.83  Aligned_cols=221  Identities=24%  Similarity=0.328  Sum_probs=165.8

Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCCCCCC---CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHhCCCHHH
Q psy817          123 TALLWCVFVKREDLLDALHQLGADLSN---DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGNYVDC  198 (854)
Q Consensus       123 t~L~~Aa~~g~~~iv~~Ll~~g~~~~~---~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~~~~~i  198 (854)
                      -.+.-|+..|..+=|+.|+..|+++|.   +|.|+||-||...+.+||++|+++|+++|..+ .|+||||.|+..||..+
T Consensus        42 a~~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i  121 (527)
T KOG0505|consen   42 AVFLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNI  121 (527)
T ss_pred             HHHHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHH
Confidence            346667888999999999999988854   99999999999999999999999999999877 59999999999999999


Q ss_pred             HHHHHhCCCCC------CchHHHHHHHcCCHHHHHHHHHC-CCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCc
Q psy817          199 AKFLIKNKAHI------HETIVHSAVSTNAVDCVQLLLSL-QINPNVLN-NKGVSPLHIAADRGLISCLKAILDSGMADV  270 (854)
Q Consensus       199 v~~Ll~~~~~~------~~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d-~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~  270 (854)
                      +++|+.+|++.      |..|...|...-..++...-... |.+++..- ....+-|        .++-.++- . +...
T Consensus       122 ~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml--------~D~~q~l~-~-G~~~  191 (527)
T KOG0505|consen  122 VEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTML--------DDARQWLN-A-GAEL  191 (527)
T ss_pred             HHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHH--------HHHHHHHh-c-cccc
Confidence            99999999876      45565555544444444433322 33211100 0000001        12233333 3 3666


Q ss_pred             cccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHH
Q psy817          271 DIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHA  350 (854)
Q Consensus       271 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~  350 (854)
                      +..... |-|+||.|+.+|+.++.++|+++|.+++.+|.+|+||||.|+..|+.+++++|+++|++.+.....|.||+..
T Consensus       192 d~~~~r-G~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv  270 (527)
T KOG0505|consen  192 DARHAR-GATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDV  270 (527)
T ss_pred             cccccc-cchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccc
Confidence            666655 5588888888888888888888888888888888888888888888888888888888888888888888887


Q ss_pred             HHhc
Q psy817          351 SLSK  354 (854)
Q Consensus       351 a~~~  354 (854)
                      |...
T Consensus       271 ~dee  274 (527)
T KOG0505|consen  271 ADEE  274 (527)
T ss_pred             hhhh
Confidence            7654

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.82  E-value=9e-20  Score=174.71  Aligned_cols=133  Identities=20%  Similarity=0.226  Sum_probs=103.3

Q ss_pred             CcHHHHHHHcCCH----HHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHH---HHHHHhCCCCCCCcc-CCCCcHHHH
Q psy817          279 VTALHLAAENGYV----ECLRILLENHANCNERNHKEQIPLHLAAKCQSVEC---MEMLLRKGSQVNASD-CDNRTPLHA  350 (854)
Q Consensus       279 ~t~L~~A~~~g~~----~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~---v~~Ll~~g~~~~~~~-~~g~t~L~~  350 (854)
                      .+++|.|++.|+.    +++++|.++|++++.+|..|+||||+|+..|+.+.   +++|+++|+++|.++ ..|.||||+
T Consensus        21 ~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~  100 (166)
T PHA02743         21 QNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHI  100 (166)
T ss_pred             CcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHH
Confidence            3677777777776    45556667777777777788888888887776543   678888888888777 478888888


Q ss_pred             HHhcCCCChHHHHHHHh-CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCC
Q psy817          351 SLSKNILSVHPLEILLK-WGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGS  413 (854)
Q Consensus       351 a~~~~~~~~~~v~~Ll~-~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~  413 (854)
                      |+..+  +.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+++|++++.++..|.
T Consensus       101 A~~~g--~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~  162 (166)
T PHA02743        101 AASTK--NYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGL  162 (166)
T ss_pred             HHHhC--CHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCc
Confidence            88877  6677888884 6888888888888888888888888888888888888888877765

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.80  E-value=4.6e-19  Score=169.80  Aligned_cols=145  Identities=19%  Similarity=0.206  Sum_probs=106.4

Q ss_pred             CCCCCCCCCCCCCcHHHHHHHcCCH----HHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHH---HHHHHhcCCCc
Q psy817          232 LQINPNVLNNKGVSPLHIAADRGLI----SCLKAILDSGMADVDIKTKERRVTALHLAAENGYVEC---LRILLENHANC  304 (854)
Q Consensus       232 ~g~~~~~~d~~g~t~L~~A~~~g~~----~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~---v~~Ll~~~~~~  304 (854)
                      +|++++..+.++.+++|.|++.|+.    +++++|.+.+ ++++.++ ..|.||||+|+..|+.+.   +++|+++|+++
T Consensus         9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g-~~~~~~d-~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadi   86 (166)
T PHA02743          9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDG-HLLHRYD-HHGRQCTHMVAWYDRANAVMKIELLVNMGADI   86 (166)
T ss_pred             cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcc-hhhhccC-CCCCcHHHHHHHhCccCHHHHHHHHHHcCCCC
Confidence            4566667777777788888888877    4555555554 5555444 356688888887776543   67888888888


Q ss_pred             CCCC-CCCCCHHHHHHhcCCHHHHHHHHh-CCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCC
Q psy817          305 NERN-HKEQIPLHLAAKCQSVECMEMLLR-KGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGY  380 (854)
Q Consensus       305 ~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~  380 (854)
                      +.++ ..|.||||+|+..|+.+++++|++ .|++++..+..|.||||+|+..+  +.+++++|+++|++++.++..|.
T Consensus        87 n~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~--~~~iv~~Ll~~ga~~~~~~~~~~  162 (166)
T PHA02743         87 NARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMR--DRRMMEILRANGAVCDDPLSIGL  162 (166)
T ss_pred             CCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcC--CHHHHHHHHHcCCCCCCcccCCc
Confidence            8777 478888888888888888888884 68888888888888888888777  66778888888888877776654

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.79  E-value=1.8e-18  Score=178.04  Aligned_cols=151  Identities=23%  Similarity=0.250  Sum_probs=98.9

Q ss_pred             hcccccCC-cHHHHHHHcCCHHHHHHHHHcCCCCCC-------CCccHHHHHHHcCCHHHHHHHHhCCCCccccC--CCc
Q psy817          115 KASQAEKT-TALLWCVFVKREDLLDALHQLGADLSN-------DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK--DSY  184 (854)
Q Consensus       115 ~~~~~~~~-t~L~~Aa~~g~~~iv~~Ll~~g~~~~~-------~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~--~g~  184 (854)
                      ++.|..+. ++|+.|+..|+.+++++|+++|+++|.       .|.||||+|+..|+.+++++|+++|+|+|..+  .|.
T Consensus        26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~  105 (300)
T PHA02884         26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKI  105 (300)
T ss_pred             hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCC
Confidence            34444444 455666666777777777777777754       57777777777777777777777777777532  355


Q ss_pred             cHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy817          185 TPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILD  264 (854)
Q Consensus       185 t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~  264 (854)
                      ||||.|+..|                           +.+++++|+++|++++.+|..|.||||+|+..++.+++..+.+
T Consensus       106 TpLh~Aa~~~---------------------------~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~  158 (300)
T PHA02884        106 TPLYISVLHG---------------------------CLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICD  158 (300)
T ss_pred             CHHHHHHHcC---------------------------CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcC
Confidence            6665555544                           4455555555666778888888888888888887777655543


Q ss_pred             cCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCC
Q psy817          265 SGMADVDIKTKERRVTALHLAAENGYVECLRILLENHA  302 (854)
Q Consensus       265 ~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~  302 (854)
                      ..   .    ...+.+|++++   ++.|+++.|+.+++
T Consensus       159 ~~---~----~~~~~~~~~~~---~n~ei~~~Lish~v  186 (300)
T PHA02884        159 NE---I----SNFYKHPKKIL---INFDILKILVSHFI  186 (300)
T ss_pred             Cc---c----cccccChhhhh---ccHHHHHHHHHHHH
Confidence            21   1    12233666654   35677777777665

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.79  E-value=1.8e-18  Score=178.05  Aligned_cols=114  Identities=26%  Similarity=0.345  Sum_probs=54.7

Q ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCCCC----CCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHc
Q psy817          213 IVHSAVSTNAVDCVQLLLSLQINPNVLN----NKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAEN  288 (854)
Q Consensus       213 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~d----~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~  288 (854)
                      +||.|+..|+.+++++|+++|+|+|.++    ..|.||||+|+..|+.+++++|+++| ++++.+++..|.||||.|+..
T Consensus        36 lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~G-ADVN~~~~~~g~TpLh~Aa~~  114 (300)
T PHA02884         36 ILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYG-ADVNRYAEEAKITPLYISVLH  114 (300)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCcCcccCCCCCCHHHHHHHc
Confidence            3444444445555555555555555442    34555555555555555555555443 444443333344555555555


Q ss_pred             CCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHH
Q psy817          289 GYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECM  327 (854)
Q Consensus       289 g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v  327 (854)
                      |+.+++++|+++|++++.+|..|.||||+|+..++.+++
T Consensus       115 ~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~  153 (300)
T PHA02884        115 GCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLA  153 (300)
T ss_pred             CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHH
Confidence            555555555555555544444455555555444444443

>PHA02741 hypothetical protein; Provisional

Probab=99.79  E-value=1.8e-18  Score=166.64  Aligned_cols=126  Identities=21%  Similarity=0.231  Sum_probs=90.8

Q ss_pred             CcCcHHHHHHHcCCHHHHHHHHh------cCCCcCCCCCCCCCHHHHHHhcCC----HHHHHHHHhCCCCCCCccC-CCC
Q psy817          277 RRVTALHLAAENGYVECLRILLE------NHANCNERNHKEQIPLHLAAKCQS----VECMEMLLRKGSQVNASDC-DNR  345 (854)
Q Consensus       277 ~~~t~L~~A~~~g~~~~v~~Ll~------~~~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~g~~~~~~~~-~g~  345 (854)
                      .|.||||+|++.|+.++++.|++      .|++++.+|..|.||||+|+..|+    .+++++|+++|+++|.++. .|.
T Consensus        20 ~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~   99 (169)
T PHA02741         20 EGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGD   99 (169)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCC
Confidence            34466666666666666665532      246667777777777777777777    4677777777777777764 777


Q ss_pred             cHHHHHHhcCCCChHHHHHHHh-CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy817          346 TPLHASLSKNILSVHPLEILLK-WGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD  404 (854)
Q Consensus       346 t~L~~a~~~~~~~~~~v~~Ll~-~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~  404 (854)
                      ||||.|+..+  +.+++++|++ .|++++..|..|.||||+|+..++.+++++|++.++.
T Consensus       100 TpLh~A~~~~--~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~  157 (169)
T PHA02741        100 TALHLAAHRR--DHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVAT  157 (169)
T ss_pred             CHHHHHHHcC--CHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence            8888877777  6677777776 4777787788888888888888888888888877654

>PHA02741 hypothetical protein; Provisional

Probab=99.78  E-value=2.1e-18  Score=166.24  Aligned_cols=126  Identities=22%  Similarity=0.250  Sum_probs=78.1

Q ss_pred             CCchHHHHHHHcCCHHHHHHHHH------CCCCCCCCCCCCCcHHHHHHHcCC----HHHHHHHHHcCCCCccccccCCc
Q psy817          209 IHETIVHSAVSTNAVDCVQLLLS------LQINPNVLNNKGVSPLHIAADRGL----ISCLKAILDSGMADVDIKTKERR  278 (854)
Q Consensus       209 ~~~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~d~~g~t~L~~A~~~g~----~~iv~~Ll~~~~~~~~~~~~~~~  278 (854)
                      .|.||||.|+..|+.++++.|++      .|++++.+|..|.||||+|+..|+    .+++++|++.+ ++++.++...|
T Consensus        20 ~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~g-adin~~~~~~g   98 (169)
T PHA02741         20 EGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELG-ADINAQEMLEG   98 (169)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcC-CCCCCCCcCCC
Confidence            34444444444444444444422      245666667777777777777766    46666666654 66665543345


Q ss_pred             CcHHHHHHHcCCHHHHHHHHh-cCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCC
Q psy817          279 VTALHLAAENGYVECLRILLE-NHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGS  335 (854)
Q Consensus       279 ~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~  335 (854)
                      .||||+|+..++.+++++|++ .|++++..|..|.|||++|+..++.+++++|++.++
T Consensus        99 ~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~  156 (169)
T PHA02741         99 DTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVA  156 (169)
T ss_pred             CCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
Confidence            677777777777777777765 366666666677777777777777777777766543

>KOG0512|consensus

Probab=99.77  E-value=2.7e-18  Score=152.32  Aligned_cols=140  Identities=30%  Similarity=0.339  Sum_probs=103.3

Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCC-cCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCCh
Q psy817          281 ALHLAAENGYVECLRILLENHAN-CNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSV  359 (854)
Q Consensus       281 ~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~  359 (854)
                      -+.+|+..+....|+.|++-.++ +|.+|.+|.||||-|+.+|+.++++.|+..|++++++...|+||||.||..+  +.
T Consensus        66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWn--N~  143 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWN--NF  143 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhccc--ch
Confidence            35667777777777777766665 6777778888888888888888888888778877777777888888887777  66


Q ss_pred             HHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCH-HHHHHHHH-cCCCccccCCCCCCHHHHHHhc
Q psy817          360 HPLEILLKWGANVNARDIFGYSPIHIAALSELS-QCVDCLIM-HGADISSKTPSGSSALSIIMRN  422 (854)
Q Consensus       360 ~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~-~~v~~Ll~-~ga~~~~~~~~g~t~l~~a~~~  422 (854)
                      +++..|+++|+|+|+......||||+||...+. ..+++|+. .+.++..++..+.||+.+|-+.
T Consensus       144 ~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT  208 (228)
T KOG0512|consen  144 EVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRT  208 (228)
T ss_pred             hHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHh
Confidence            777778888888887777777888887776553 44454443 5677777777788888877654

>KOG3599|consensus

Probab=99.77  E-value=1.5e-17  Score=190.48  Aligned_cols=215  Identities=14%  Similarity=0.243  Sum_probs=173.2

Q ss_pred             cccCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhchhhHHHHHHHHHHHHHHHhccCc---------------
Q psy817          554 LLRNPDFMETVWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKR---------------  618 (854)
Q Consensus       554 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~y~~~~wN~~d~~~~~~~~~~~~~~~~~---------------  618 (854)
                      .+..+.+.....+++.++.++..+.|...+. ..+.+.|+++.||++|+.++.+.++.......+               
T Consensus       458 ~~~~~~~~~l~~vvf~l~~~yf~~~e~~~i~-~~~~~~y~~s~wN~ld~~i~~ls~~~~~~~~~r~~l~~~~l~~~~~~~  536 (798)
T KOG3599|consen  458 VSAGSSLIMLCEVVFLLFVLYFAVAEGLKIW-IHRLGRYVRSKWNWLDLAIVLLSVVLLVLMITRTGLADGVLTGFERAS  536 (798)
T ss_pred             hccccHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            3344566667777788888888888888873 255669999999999998875544332221100               


Q ss_pred             ---c------cch---hhhHHHHHHHHHHHHHHHHHcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy817          619 ---T------YIW---QNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPS  686 (854)
Q Consensus       619 ---~------~~~---~~~~~a~~~~l~~~~ll~~~~~~~~~G~~v~m~~~~~~d~~~f~~i~~~~l~aF~~~f~~l~~~  686 (854)
                         .      ..|   .+.+.|+.+++.|+|+..++|.++.++.+..++.+..++++.|.++++++++||++..+++|++
T Consensus       537 ~~~f~~F~~~a~~~~~~~~l~a~lvfl~tiK~~k~l~f~~t~~~~s~TL~ra~~~I~gf~l~~~I~~~aya~l~~llfG~  616 (798)
T KOG3599|consen  537 PRTFIDFTEVAQWNIAARNLLAFLVFLTTIKLWKVLRFNKTMSQFSSTLSRAWKEIVGFALMFLILFFAYAQLGYLLFGN  616 (798)
T ss_pred             CccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence               0      001   1457899999999999999999999999999999999999999999999999999999999988


Q ss_pred             C-CccCChHHHHHHHHHHHhcCcchhhhhccCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhH
Q psy817          687 E-DRFQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKTAGL  765 (854)
Q Consensus       687 ~-~~f~~~~~s~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ilf~~f~~~~~ivLlNlLIA~~~~~~~~v~~~a~~  765 (854)
                      + +.|+++..|+.+++.+++|++++.+++..        -+++|.++|.+|++++..||+||+.|++.++|+++++....
T Consensus       617 ~v~~f~~f~~s~~t~~~~~~G~~~~~~i~~~--------~r~LG~~~~~~~v~~v~~illnmF~aiI~~~~~evk~~~~~  688 (798)
T KOG3599|consen  617 QVSDFRTFVASIVTLLRYILGDFCPAEIFHA--------NRILGPLLFLTYVFVVSFILLNLFVAIINDTYGEVKADLAK  688 (798)
T ss_pred             ccCChHHHHHHHHHHHHHHhccCCccccccC--------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhHHHhh
Confidence            5 67999999999999999998877765433        24789999999999999999999999999999999988766


Q ss_pred             HHHHHHHHHHHHH
Q psy817          766 DKLVRQTELIHSL  778 (854)
Q Consensus       766 ~~~~~~~~~i~~~  778 (854)
                      + .....+++..+
T Consensus       689 ~-~~~~~~l~~~l  700 (798)
T KOG3599|consen  689 E-RSSEVELIDFL  700 (798)
T ss_pred             c-cccchhHHHHH
Confidence            5 34445554444

>KOG0512|consensus

Probab=99.75  E-value=7.4e-18  Score=149.53  Aligned_cols=144  Identities=25%  Similarity=0.268  Sum_probs=98.5

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHH
Q psy817          246 PLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVE  325 (854)
Q Consensus       246 ~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~  325 (854)
                      .+.+|+..+.+..|+.||+.....+|.++ ..|.||||.|+.+|+.++|+.|+..|++++.+...|+||||.||..++.+
T Consensus        66 l~lwaae~nrl~eV~~lL~e~an~vNtrD-~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~  144 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSEKANHVNTRD-EDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFE  144 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHhccccccccc-cccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchh
Confidence            34566667777777777766545555554 44567777777777777777777777777777777777777777777777


Q ss_pred             HHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcC
Q psy817          326 CMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSE  390 (854)
Q Consensus       326 ~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~  390 (854)
                      ++-.|+++|+|+|+......||||.|+...+.....--+|...+.++...+..+.||+.+|-+.+
T Consensus       145 va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~  209 (228)
T KOG0512|consen  145 VAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTS  209 (228)
T ss_pred             HHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhh
Confidence            77777777777777777777777777766643333333444566677777777778887776654

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.75  E-value=7.4e-18  Score=160.16  Aligned_cols=99  Identities=19%  Similarity=0.257  Sum_probs=79.8

Q ss_pred             CCCCCCCCHHHHHHhcCCH---HHHHHHHhCCCCCCCcc-CCCCcHHHHHHhcCCCChHHHHHHHh-CCCCCccCCCCCC
Q psy817          306 ERNHKEQIPLHLAAKCQSV---ECMEMLLRKGSQVNASD-CDNRTPLHASLSKNILSVHPLEILLK-WGANVNARDIFGY  380 (854)
Q Consensus       306 ~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~g~~~~~~~-~~g~t~L~~a~~~~~~~~~~v~~Ll~-~g~d~n~~d~~g~  380 (854)
                      .+|..|.||||+|+..|+.   +++++|+++|++++..+ ..|+||||+|+..+  +.+++++|++ .|++++.+|..|.
T Consensus        50 ~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~--~~~i~~~Ll~~~g~d~n~~~~~g~  127 (154)
T PHA02736         50 EYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQ--NYELATWLCNQPGVNMEILNYAFK  127 (154)
T ss_pred             HhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhC--CHHHHHHHHhCCCCCCccccCCCC
Confidence            4577788888888888776   35778888888888877 47888888888887  6777888886 4888888888888


Q ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCcc
Q psy817          381 SPIHIAALSELSQCVDCLIMHGADIS  406 (854)
Q Consensus       381 t~L~~A~~~~~~~~v~~Ll~~ga~~~  406 (854)
                      ||||+|+..|+.+++++|+++|++.+
T Consensus       128 tpL~~A~~~~~~~i~~~Ll~~ga~~~  153 (154)
T PHA02736        128 TPYYVACERHDAKMMNILRAKGAQCK  153 (154)
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            88888888888888888888888764

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.71  E-value=3.5e-17  Score=155.52  Aligned_cols=94  Identities=22%  Similarity=0.307  Sum_probs=52.4

Q ss_pred             CcCcHHHHHHHcCCH---HHHHHHHhcCCCcCCCC-CCCCCHHHHHHhcCCHHHHHHHHh-CCCCCCCccCCCCcHHHHH
Q psy817          277 RRVTALHLAAENGYV---ECLRILLENHANCNERN-HKEQIPLHLAAKCQSVECMEMLLR-KGSQVNASDCDNRTPLHAS  351 (854)
Q Consensus       277 ~~~t~L~~A~~~g~~---~~v~~Ll~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~a  351 (854)
                      .|.||||+|+..|+.   +++++|+++|++++.++ ..|.||||+|+..|+.+++++|++ .|++++..|..|.||||+|
T Consensus        54 ~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A  133 (154)
T PHA02736         54 HGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVA  133 (154)
T ss_pred             CCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHH
Confidence            344555555555554   23555555555555555 355555555555555555555554 3555555555555555555


Q ss_pred             HhcCCCChHHHHHHHhCCCCC
Q psy817          352 LSKNILSVHPLEILLKWGANV  372 (854)
Q Consensus       352 ~~~~~~~~~~v~~Ll~~g~d~  372 (854)
                      +..+  ..+++++|+++|++.
T Consensus       134 ~~~~--~~~i~~~Ll~~ga~~  152 (154)
T PHA02736        134 CERH--DAKMMNILRAKGAQC  152 (154)
T ss_pred             HHcC--CHHHHHHHHHcCCCC
Confidence            5555  445555555555544

>KOG3676|consensus

Probab=99.70  E-value=3.5e-14  Score=156.54  Aligned_cols=184  Identities=24%  Similarity=0.288  Sum_probs=150.5

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcC--------CCCccccccCCcCcHHHHHHHc---CCHHHHHHHHhcCCC-----cCC
Q psy817          243 GVSPLHIAADRGLISCLKAILDSG--------MADVDIKTKERRVTALHLAAEN---GYVECLRILLENHAN-----CNE  306 (854)
Q Consensus       243 g~t~L~~A~~~g~~~iv~~Ll~~~--------~~~~~~~~~~~~~t~L~~A~~~---g~~~~v~~Ll~~~~~-----~~~  306 (854)
                      .+.++..|...+.++...-|+...        ..+++.+ ...|.|.||.|.-+   ++-++++.|++.-..     ...
T Consensus       101 d~~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~R-Ga~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~  179 (782)
T KOG3676|consen  101 DRDALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNER-GATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTS  179 (782)
T ss_pred             chhhhhhccccccHHHHhccchhhhhhhhhhhhhccccc-cchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhh
Confidence            335667777777777666665543        1233433 45678999999874   566899999986432     123


Q ss_pred             CCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCcc-----------------------CCCCcHHHHHHhcCCCChHHHH
Q psy817          307 RNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASD-----------------------CDNRTPLHASLSKNILSVHPLE  363 (854)
Q Consensus       307 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-----------------------~~g~t~L~~a~~~~~~~~~~v~  363 (854)
                      ....|+||||+|+.+.+.++|++|++.|||++++.                       ..|..||-.|+.-+  +.++++
T Consensus       180 eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~n--q~eivr  257 (782)
T KOG3676|consen  180 EEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTN--QPEIVR  257 (782)
T ss_pred             HhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcC--CHHHHH
Confidence            34689999999999999999999999999987531                       24788999999988  889999


Q ss_pred             HHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--ccccCCCCCCHHHHHHhcCCcchHH
Q psy817          364 ILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD--ISSKTPSGSSALSIIMRNTPSSISS  429 (854)
Q Consensus       364 ~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~--~~~~~~~g~t~l~~a~~~~~~~~~~  429 (854)
                      +|+++|+|+|++|.+|+|.||..+.+-..+|.++++++|++  ...+|+.|.|||..|++-+..++-.
T Consensus       258 lLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~  325 (782)
T KOG3676|consen  258 LLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQ  325 (782)
T ss_pred             HHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHH
Confidence            99999999999999999999999999999999999999999  8999999999999999988877643

>KOG0195|consensus

Probab=99.66  E-value=8.6e-17  Score=154.11  Aligned_cols=117  Identities=32%  Similarity=0.436  Sum_probs=61.9

Q ss_pred             CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCC
Q psy817          233 QINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQ  312 (854)
Q Consensus       233 g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~  312 (854)
                      .-|.|.-|..|.+|||+|++.|+..+++.|+..| +.+|..... ..||||+|+..||-++|+.|++..+|+|..+..|+
T Consensus        24 ehdln~gddhgfsplhwaakegh~aivemll~rg-arvn~tnmg-ddtplhlaaahghrdivqkll~~kadvnavnehgn  101 (448)
T KOG0195|consen   24 EHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRG-ARVNSTNMG-DDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGN  101 (448)
T ss_pred             ccccccccccCcchhhhhhhcccHHHHHHHHhcc-cccccccCC-CCcchhhhhhcccHHHHHHHHHHhcccchhhccCC
Confidence            3444555555555555555555555555555544 445543322 22555555555555555555555555555555555


Q ss_pred             CHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHH
Q psy817          313 IPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHAS  351 (854)
Q Consensus       313 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a  351 (854)
                      ||||+||-.|...+.+-|+..|+.++..+++|.||+..|
T Consensus       102 tplhyacfwgydqiaedli~~ga~v~icnk~g~tpldka  140 (448)
T KOG0195|consen  102 TPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKA  140 (448)
T ss_pred             CchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhh
Confidence            555555555555555555555555555555555555543

>KOG0195|consensus

Probab=99.66  E-value=2.5e-16  Score=150.91  Aligned_cols=153  Identities=27%  Similarity=0.327  Sum_probs=119.5

Q ss_pred             HHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHH
Q psy817          251 ADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEML  330 (854)
Q Consensus       251 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L  330 (854)
                      |+.|+.--|++-++...-|.|.- ++.|.+|||+|++.|+..+|+.|+.+|+.+|..+....||||+|+.+||-++|+.|
T Consensus         8 cregna~qvrlwld~tehdln~g-ddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkl   86 (448)
T KOG0195|consen    8 CREGNAFQVRLWLDDTEHDLNVG-DDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKL   86 (448)
T ss_pred             hhcCCeEEEEEEecCcccccccc-cccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHH
Confidence            34444444444455444555544 46788999999999999999999999999999999889999999999999999999


Q ss_pred             HhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Q psy817          331 LRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADIS  406 (854)
Q Consensus       331 l~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~  406 (854)
                      ++..+|+|+.+..|+||||+||..|  .-.+.+-|+..|+.++..++.|.|||..|--.-...+.+.--++|.+++
T Consensus        87 l~~kadvnavnehgntplhyacfwg--ydqiaedli~~ga~v~icnk~g~tpldkakp~l~~~l~e~aek~gq~~n  160 (448)
T KOG0195|consen   87 LSRKADVNAVNEHGNTPLHYACFWG--YDQIAEDLISCGAAVNICNKKGMTPLDKAKPMLKNTLLEIAEKHGQSPN  160 (448)
T ss_pred             HHHhcccchhhccCCCchhhhhhhc--HHHHHHHHHhccceeeecccCCCCchhhhchHHHHHHHHHHHHhCCCCC
Confidence            9999999999999999999999999  4566899999999999999999999987643322233333335676665

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.62  E-value=2.9e-15  Score=127.70  Aligned_cols=89  Identities=33%  Similarity=0.535  Sum_probs=52.1

Q ss_pred             HHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHH
Q psy817          315 LHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQC  394 (854)
Q Consensus       315 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~  394 (854)
                      ||.||+.|+.+++++|++.+.+++.    |+||||+|+..|  +.+++++|+++|++++.+|..|.||||+|+.+|+.++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~--~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~   74 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENG--NLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEI   74 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTT--THHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcC--CHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHH
Confidence            4555555555555555555555443    555666666555  4555666666666666666666666666666666666


Q ss_pred             HHHHHHcCCCccccC
Q psy817          395 VDCLIMHGADISSKT  409 (854)
Q Consensus       395 v~~Ll~~ga~~~~~~  409 (854)
                      +++|+++|++++.+|
T Consensus        75 ~~~Ll~~g~~~~~~n   89 (89)
T PF12796_consen   75 VKLLLEHGADVNIRN   89 (89)
T ss_dssp             HHHHHHTTT-TTSS-
T ss_pred             HHHHHHcCCCCCCcC
Confidence            666666666666543

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.61  E-value=3.4e-15  Score=127.26  Aligned_cols=88  Identities=43%  Similarity=0.669  Sum_probs=54.6

Q ss_pred             HHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHH
Q psy817          247 LHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVEC  326 (854)
Q Consensus       247 L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~  326 (854)
                      ||.|++.|+.+++++|++.+ .+++.     |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.+|+.++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~-~~~~~-----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~   74 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKG-ADINL-----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEI   74 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTT-STTTS-----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCc-CCCCC-----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHH
Confidence            56666666666666666643 44443     4466666666666666666666666666666666666666666666666


Q ss_pred             HHHHHhCCCCCCCc
Q psy817          327 MEMLLRKGSQVNAS  340 (854)
Q Consensus       327 v~~Ll~~g~~~~~~  340 (854)
                      +++|+++|++++.+
T Consensus        75 ~~~Ll~~g~~~~~~   88 (89)
T PF12796_consen   75 VKLLLEHGADVNIR   88 (89)
T ss_dssp             HHHHHHTTT-TTSS
T ss_pred             HHHHHHcCCCCCCc
Confidence            66666666666554

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>PF00520 Ion_trans: Ion transport protein calcium channel signature potassium channel signature sodium channel signature; InterPro: IPR005821 This group of proteins is found in sodium, potassium, and calcium ion channels proteins

Probab=99.57  E-value=5e-14  Score=140.65  Aligned_cols=178  Identities=17%  Similarity=0.245  Sum_probs=139.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhh--hhhhhchhhHHHHHHHHHHHHHHHhccCcccchhhhHHHHHHHHHHHHHHHHH
Q psy817          565 WYVLALLATIELIRKIFGLVEYASF--REYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNLMGMI  642 (854)
Q Consensus       565 ~~~~~~~~~~~~~~e~~~~~~~~~~--~~y~~~~wN~~d~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ll~~~  642 (854)
                      .+++.++..++++.+...    .+.  ++|+++.||++|++..+...+............ ..+.++..++.|+|+++++
T Consensus         3 ~~~~~~~f~~e~~l~~~~----~~~~~~~y~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~R~l~~~   77 (200)
T PF00520_consen    3 EIIFDVIFILEIVLRFFA----LGFKRRRYFRSWWNWFDFISVIPSIVSVILRSYGSASA-QSLLRIFRLLRLLRLLRLL   77 (200)
T ss_dssp             HHHHHHHHHHHHHHHHHT----CCCG-GCCCCSHHHHHHHHHHHHHCCHHCCHCSS--HH-CHCHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHH----hccHHHHHhcChhhcccccccccccccccccccccccc-cceEEEEEeeccccccccc
Confidence            455666666777777664    343  899999999999987666544333322222111 2577888999999999999


Q ss_pred             cccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------------------CccCChHHHHHHHHHHH
Q psy817          643 GQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSE------------------DRFQNPIIGFINILVMM  704 (854)
Q Consensus       643 ~~~~~~G~~v~m~~~~~~d~~~f~~i~~~~l~aF~~~f~~l~~~~------------------~~f~~~~~s~~~~~~~~  704 (854)
                      +.++.+|+++.++.++.+++.++++++++++.+|+++++.+|+..                  +.|+++..+++.++.++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~f~~~~~s~~~~~~~~  157 (200)
T PF00520_consen   78 RRFRSLRRLLRALIRSFPDLFKFILLLFIVLLFFACIGYQLFGGSDNSCCDPTWDSENDIYGYENFDSFGESLYWLFQTM  157 (200)
T ss_dssp             HTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS-------SS----SSTHHHHSSHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccchhheeccccccccccccccccccccccccccccccccccccccc
Confidence            999999999999999999999999999999999999999999764                  23889999999999999


Q ss_pred             hcCcchhhhhccCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy817          705 TGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIA  752 (854)
Q Consensus       705 ~G~~~~~~~~~~~~~~~~~~~~~~~~ilf~~f~~~~~ivLlNlLIA~~  752 (854)
                      +|+-+.+......     ...++.+.++|++|.+++.++++|++||+|
T Consensus       158 t~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~l~nlliavi  200 (200)
T PF00520_consen  158 TGEGWGDVMPSCM-----SARSWLAVIFFISFIIIVSILLLNLLIAVI  200 (200)
T ss_dssp             TTTTCCCCHHHHH-----HTTSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCccccccccc-----cccchhHhHHhhhhhhhHHHHHHHHHHhcC
Confidence            9986654332110     112467888999999999999999999997

The proteins have 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some Na channels proteins the domain is repeated four times, whereas in others (e.g. K channels) the protein forms a tetramer in the membrane. A bacterial structure of the protein is known for the last two helices but is not included in the Pfam family due to it lacking the first four helices. ; GO: 0005216 ion channel activity, 0006811 ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3VMX_B 1QG9_A 1UJL_A 2LE7_A 2LCM_A 3A2A_A 3RW0_A 4EKW_A 3RVY_B 3RVZ_B ....

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.56  E-value=7.1e-14  Score=127.72  Aligned_cols=120  Identities=44%  Similarity=0.654  Sum_probs=78.2

Q ss_pred             CcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCC
Q psy817          277 RRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNI  356 (854)
Q Consensus       277 ~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~  356 (854)
                      .|.||||.|+..|+.+++++|++.+.+.+..+..|.+|++.|+..++.+++++|+++|++++..+..|.||+|.|+..+ 
T Consensus         6 ~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~-   84 (126)
T cd00204           6 DGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNG-   84 (126)
T ss_pred             CCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcC-
Confidence            3456666666666666666666666665566666666666666666666666666666666666666666666666666 


Q ss_pred             CChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHH
Q psy817          357 LSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCL  398 (854)
Q Consensus       357 ~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~L  398 (854)
                       +.+++++|++.|.+++..+..|.||++.|...++.+++++|
T Consensus        85 -~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L  125 (126)
T cd00204          85 -NLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLL  125 (126)
T ss_pred             -cHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHh
Confidence             45666666666666666666666777777777666666665

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.52  E-value=2.7e-13  Score=123.89  Aligned_cols=122  Identities=36%  Similarity=0.587  Sum_probs=113.3

Q ss_pred             CCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHH
Q psy817          306 ERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHI  385 (854)
Q Consensus       306 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~  385 (854)
                      .++.+|.|||+.|+..++.+++++|+++|.+.+..+..|.+|+|.|+..+  +.+++++|++.|++++..+..|.||+|+
T Consensus         2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~--~~~~~~~ll~~~~~~~~~~~~~~~~l~~   79 (126)
T cd00204           2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNG--HLEIVKLLLEKGADVNARDKDGNTPLHL   79 (126)
T ss_pred             CcCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCccccCCCCCCHHHH
Confidence            35678999999999999999999999999998899999999999999999  7799999999999999999999999999


Q ss_pred             HHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHH
Q psy817          386 AALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISS  429 (854)
Q Consensus       386 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~  429 (854)
                      |+..++.+++++|+++|.+.+..+..|.||++.|.......+..
T Consensus        80 a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  123 (126)
T cd00204          80 AARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVK  123 (126)
T ss_pred             HHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHH
Confidence            99999999999999999999999999999999999886655543

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>KOG4214|consensus

Probab=99.44  E-value=3.9e-13  Score=106.63  Aligned_cols=102  Identities=24%  Similarity=0.321  Sum_probs=81.0

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHH
Q psy817          246 PLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVE  325 (854)
Q Consensus       246 ~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~  325 (854)
                      -+.+++++|..+-|+-.+..+ .++|..  .+|++|||+|+..|..+++++|+..|++++.+|+.|-|||..|+..||.+
T Consensus         5 ~~~W~vkNG~~DeVk~~v~~g-~nVn~~--~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~   81 (117)
T KOG4214|consen    5 SVAWNVKNGEIDEVKQSVNEG-LNVNEI--YGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRD   81 (117)
T ss_pred             hHhhhhccCcHHHHHHHHHcc-ccHHHH--hCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHH
Confidence            356778888888888887765 566644  36778888888888888888888888888888888888888888888888


Q ss_pred             HHHHHHhCCCCCCCccCCCCcHHHH
Q psy817          326 CMEMLLRKGSQVNASDCDNRTPLHA  350 (854)
Q Consensus       326 ~v~~Ll~~g~~~~~~~~~g~t~L~~  350 (854)
                      +|++|+++|++-.....+|.+.+..
T Consensus        82 cVklLL~~GAdrt~~~PdG~~~~ea  106 (117)
T KOG4214|consen   82 CVKLLLQNGADRTIHAPDGTALIEA  106 (117)
T ss_pred             HHHHHHHcCcccceeCCCchhHHhh
Confidence            8888888888877777777665553

>KOG4214|consensus

Probab=99.44  E-value=4.1e-13  Score=106.47  Aligned_cols=103  Identities=26%  Similarity=0.457  Sum_probs=80.9

Q ss_pred             HHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHH
Q psy817          314 PLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQ  393 (854)
Q Consensus       314 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~  393 (854)
                      -+.+++++|.++-|+-.+..|.++|..- .|++|||+|+..|  .++++++|+..|++++.+|+.|-|||.-|+..||.+
T Consensus         5 ~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~G--Ql~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~   81 (117)
T KOG4214|consen    5 SVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYG--QLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRD   81 (117)
T ss_pred             hHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcc--hHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHH
Confidence            3456677777777777777776666543 6777888887777  667788888888888888888888888888999999


Q ss_pred             HHHHHHHcCCCccccCCCCCCHHHHH
Q psy817          394 CVDCLIMHGADISSKTPSGSSALSII  419 (854)
Q Consensus       394 ~v~~Ll~~ga~~~~~~~~g~t~l~~a  419 (854)
                      ||++|+++|||-..+..+|.+.+..+
T Consensus        82 cVklLL~~GAdrt~~~PdG~~~~eat  107 (117)
T KOG4214|consen   82 CVKLLLQNGADRTIHAPDGTALIEAT  107 (117)
T ss_pred             HHHHHHHcCcccceeCCCchhHHhhc
Confidence            99999999999888888888776654

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.36  E-value=2e-11  Score=124.62  Aligned_cols=125  Identities=31%  Similarity=0.431  Sum_probs=115.0

Q ss_pred             CCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCC-----HHHHHHHHhCCC---CCCCccCCCCcH
Q psy817          276 ERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQS-----VECMEMLLRKGS---QVNASDCDNRTP  347 (854)
Q Consensus       276 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~-----~~~v~~Ll~~g~---~~~~~~~~g~t~  347 (854)
                      ..+.++++.|+..+..++++++++.|++++.++..|.||+|.|+..++     .++++.|++.|+   ..+..|..|.||
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tp  150 (235)
T COG0666          71 LDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTP  150 (235)
T ss_pred             ccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCch
Confidence            345699999999999999999999999999999999999999999999     999999999999   566669999999


Q ss_pred             HHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q psy817          348 LHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHG  402 (854)
Q Consensus       348 L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g  402 (854)
                      ||+|+..|  ..++++.|++.|++++.++..|.|++++|+..++.++++.+++.+
T Consensus       151 l~~A~~~~--~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         151 LHWAALNG--DADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             hHHHHHcC--chHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            99999999  558899999999999999999999999999999999999999976

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.31  E-value=2e-11  Score=124.76  Aligned_cols=124  Identities=38%  Similarity=0.455  Sum_probs=108.9

Q ss_pred             CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC-----HHHHHHHHHcCCC--CccccccCCcCcHH
Q psy817          210 HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGL-----ISCLKAILDSGMA--DVDIKTKERRVTAL  282 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~-----~~iv~~Ll~~~~~--~~~~~~~~~~~t~L  282 (854)
                      +.++++.|+..+..+++++++..|++++..|..|.||||.|+.+|+     .++++.|++.+ +  +.....+..|.|||
T Consensus        73 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g-~~~~~~~~~~~~g~tpl  151 (235)
T COG0666          73 GRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAG-ADLDVNNLRDEDGNTPL  151 (235)
T ss_pred             ccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcC-CCCCCccccCCCCCchh
Confidence            5678888888888888888899999999999999999999999999     99999999987 5  44445456778999


Q ss_pred             HHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCC
Q psy817          283 HLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKG  334 (854)
Q Consensus       283 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g  334 (854)
                      |+|+..|+.++++.|++.|++++.++..|.|+++.|+..++.++++.+++.+
T Consensus       152 ~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         152 HWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             HHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999999999999876

>KOG1710|consensus

Probab=99.29  E-value=1.8e-11  Score=118.06  Aligned_cols=121  Identities=26%  Similarity=0.306  Sum_probs=110.4

Q ss_pred             chHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCC
Q psy817          211 ETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGY  290 (854)
Q Consensus       211 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~  290 (854)
                      ..+|.-++..|+.+...-|++.--++|.+|..|.|+|..|+..|+.+++++|++.| +|+|......+.||||.|+-.|+
T Consensus        13 ~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~g-aDvN~~qhg~~YTpLmFAALSGn   91 (396)
T KOG1710|consen   13 KSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELG-ADVNDKQHGTLYTPLMFAALSGN   91 (396)
T ss_pred             hhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhC-CCcCcccccccccHHHHHHHcCC
Confidence            46777777788888888888765568999999999999999999999999999997 99999999999999999999999


Q ss_pred             HHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHh
Q psy817          291 VECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLR  332 (854)
Q Consensus       291 ~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~  332 (854)
                      .++.++|++.|+.....+.-|+|+-..|+--|+.++|..+-.
T Consensus        92 ~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN  133 (396)
T KOG1710|consen   92 QDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINN  133 (396)
T ss_pred             chHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHhc
Confidence            999999999999999999999999999999999999988754

>KOG0515|consensus

Probab=99.26  E-value=1.4e-11  Score=128.15  Aligned_cols=87  Identities=28%  Similarity=0.336  Sum_probs=78.7

Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCCCC---CCCCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHhCCCHHH
Q psy817          123 TALLWCVFVKREDLLDALHQLGADL---SNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGNYVDC  198 (854)
Q Consensus       123 t~L~~Aa~~g~~~iv~~Ll~~g~~~---~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~~~~~i  198 (854)
                      -.|.-|+..|.+|+|+..+..-.|+   |.+|-||||-|++.||.+||++|++.|+|+|..+ +|+||||+|+.+++..+
T Consensus       552 aLLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~  631 (752)
T KOG0515|consen  552 ALLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPM  631 (752)
T ss_pred             HHHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHH
Confidence            3466789999999999998775554   6699999999999999999999999999999876 79999999999999999


Q ss_pred             HHHHHhCCCCC
Q psy817          199 AKFLIKNKAHI  209 (854)
Q Consensus       199 v~~Ll~~~~~~  209 (854)
                      ++.|++.|+.+
T Consensus       632 ckqLVe~Gaav  642 (752)
T KOG0515|consen  632 CKQLVESGAAV  642 (752)
T ss_pred             HHHHHhccceE
Confidence            99999999876

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.25  E-value=3.3e-11  Score=140.75  Aligned_cols=104  Identities=27%  Similarity=0.376  Sum_probs=81.0

Q ss_pred             HHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHH
Q psy817          314 PLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQ  393 (854)
Q Consensus       314 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~  393 (854)
                      .|+.|+..|+.+.++.|+++|+++|..|..|+||||+|+..|  +.+++++|+++|+++|.+|..|.||||+|+..|+.+
T Consensus        85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g--~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~  162 (664)
T PTZ00322         85 ELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANG--HVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFRE  162 (664)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCC--CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHH
Confidence            467777788888888888888888888888888888888877  677788888888888888888888888888888888


Q ss_pred             HHHHHHHc-------CCCccccCCCCCCHHHHH
Q psy817          394 CVDCLIMH-------GADISSKTPSGSSALSII  419 (854)
Q Consensus       394 ~v~~Ll~~-------ga~~~~~~~~g~t~l~~a  419 (854)
                      ++++|+++       |++.+..+..|.+|+..+
T Consensus       163 iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~  195 (664)
T PTZ00322        163 VVQLLSRHSQCHFELGANAKPDSFTGKPPSLED  195 (664)
T ss_pred             HHHHHHhCCCcccccCCCCCccccCCCCccchh
Confidence            88888877       777777777777665443

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.23  E-value=8.5e-12  Score=94.82  Aligned_cols=55  Identities=40%  Similarity=0.590  Sum_probs=31.3

Q ss_pred             HHhCC-CCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHH
Q psy817          365 LLKWG-ANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSII  419 (854)
Q Consensus       365 Ll~~g-~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a  419 (854)
                      |+++| .++|.+|..|+||||+|+.+|+.+++++|+++|+|++.+|..|.||+++|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            46667 88899999999999999999999999999999999999999999999886

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.21  E-value=2.8e-11  Score=91.58  Aligned_cols=54  Identities=33%  Similarity=0.462  Sum_probs=41.4

Q ss_pred             CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy817          210 HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAIL  263 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll  263 (854)
                      |.||+|.|+..|+.+++++|+++|+|+|.+|.+|.||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            578888888888888888888888888888888888888888888888888885

...

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.20  E-value=6.4e-11  Score=138.39  Aligned_cols=102  Identities=27%  Similarity=0.367  Sum_probs=65.9

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHH
Q psy817          246 PLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVE  325 (854)
Q Consensus       246 ~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~  325 (854)
                      .|+.|+..|+.++++.|++++ +++|.++ ..|.||||+|+.+|+.+++++|+++|++++.+|..|.||||+|+..|+.+
T Consensus        85 ~L~~aa~~G~~~~vk~LL~~G-adin~~d-~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~  162 (664)
T PTZ00322         85 ELCQLAASGDAVGARILLTGG-ADPNCRD-YDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFRE  162 (664)
T ss_pred             HHHHHHHcCCHHHHHHHHHCC-CCCCCcC-CCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHH
Confidence            466666666666666666654 6666554 34556666666666666666666666666666666666666666666666


Q ss_pred             HHHHHHhC-------CCCCCCccCCCCcHHH
Q psy817          326 CMEMLLRK-------GSQVNASDCDNRTPLH  349 (854)
Q Consensus       326 ~v~~Ll~~-------g~~~~~~~~~g~t~L~  349 (854)
                      ++++|+++       |++.+..+..|.+|+.
T Consensus       163 iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~  193 (664)
T PTZ00322        163 VVQLLSRHSQCHFELGANAKPDSFTGKPPSL  193 (664)
T ss_pred             HHHHHHhCCCcccccCCCCCccccCCCCccc
Confidence            66666666       5555555555555543

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.19  E-value=4.6e-11  Score=90.38  Aligned_cols=54  Identities=37%  Similarity=0.594  Sum_probs=38.4

Q ss_pred             cCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHH
Q psy817          278 RVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLL  331 (854)
Q Consensus       278 ~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll  331 (854)
                      |.||||+|++.|+.+++++|+++|++++.+|.+|.||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            457888888888888888888888888888888888888888888888888775

...

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.17  E-value=2.5e-11  Score=92.30  Aligned_cols=55  Identities=40%  Similarity=0.620  Sum_probs=23.7

Q ss_pred             HHhcC-CCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHH
Q psy817          297 LLENH-ANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHAS  351 (854)
Q Consensus       297 Ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a  351 (854)
                      |+++| ++++.+|..|.||||+||.+|+.+++++|++.|++++.+|..|+||+|+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            45555 66666667777777777777777777777766666666666666666664

>KOG0515|consensus

Probab=99.15  E-value=9.6e-11  Score=121.95  Aligned_cols=117  Identities=26%  Similarity=0.251  Sum_probs=86.9

Q ss_pred             HHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHH
Q psy817          282 LHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHP  361 (854)
Q Consensus       282 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~  361 (854)
                      |.-|+-.|.+|+|+..+..-.|+...+..|-|+||-|++.||++||++|++.|+++|..|.+|+||||+|+.++  ++.+
T Consensus       554 LLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCN--nv~~  631 (752)
T KOG0515|consen  554 LLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCN--NVPM  631 (752)
T ss_pred             HHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcC--chHH
Confidence            34467778888888877777777777888888888888888888888888888888888888888888888877  7777


Q ss_pred             HHHHHhCCCCCccC-CCCCCCHHHHHH--HcCCHHHHHHHHH
Q psy817          362 LEILLKWGANVNAR-DIFGYSPIHIAA--LSELSQCVDCLIM  400 (854)
Q Consensus       362 v~~Ll~~g~d~n~~-d~~g~t~L~~A~--~~~~~~~v~~Ll~  400 (854)
                      ++.|++.|+.+-+. -.++.||..-+-  +.|..+|.++|-.
T Consensus       632 ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~  673 (752)
T KOG0515|consen  632 CKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG  673 (752)
T ss_pred             HHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence            88888888766443 235666655433  3466777777764

>KOG1710|consensus

Probab=99.15  E-value=2.5e-10  Score=110.31  Aligned_cols=117  Identities=24%  Similarity=0.264  Sum_probs=73.1

Q ss_pred             cHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCC-ccCCCCcHHHHHHhcCCCC
Q psy817          280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNA-SDCDNRTPLHASLSKNILS  358 (854)
Q Consensus       280 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~a~~~~~~~  358 (854)
                      .||.-++..|+.+-...|++.--++|.+|..|.++|..|+..|+.+++++|++.|+|+|. .+..+.||||.|+-+|  +
T Consensus        14 ~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSG--n   91 (396)
T KOG1710|consen   14 SPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSG--N   91 (396)
T ss_pred             hHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcC--C
Confidence            677777777777777777776555777777788888777777887777777777777764 2334445555555555  3


Q ss_pred             hHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHH
Q psy817          359 VHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCL  398 (854)
Q Consensus       359 ~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~L  398 (854)
                      .++.++|++.|+.+...++-|+|+-..|+.-|+-++|..+
T Consensus        92 ~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iI  131 (396)
T KOG1710|consen   92 QDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAII  131 (396)
T ss_pred             chHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHH
Confidence            3334555555555544455555555555555555555443

>KOG2302|consensus

Probab=99.10  E-value=1.5e-08  Score=112.75  Aligned_cols=213  Identities=15%  Similarity=0.232  Sum_probs=139.8

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhhhhhhchhhHHHHHHHHHHHHHHHhccCcccchhhhHHHHHH---HHHHHHHHHHH
Q psy817          566 YVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAV---LLGWSNLMGMI  642 (854)
Q Consensus       566 ~~~~~~~~~~~~~e~~~~~~~~~~~~y~~~~wN~~d~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~---~l~~~~ll~~~  642 (854)
                      ++...+.+.+...++..+-++.|-..|+++.||.+|.+++...++-+.+......  ..-+..+--   ++..+|-+..+
T Consensus      1163 yIFtaIfV~Em~lKVVALGl~fge~aYl~ssWN~LDgflv~vsviDilvs~asa~--g~kILgVlrvLRlLRtlRpLRvi 1240 (1956)
T KOG2302|consen 1163 YIFTAIFVVEMTLKVVALGLYFGEQAYLRSSWNVLDGFLVAVSVIDILVSQASAG--GAKILGVLRVLRLLRTLRPLRVI 1240 (1956)
T ss_pred             hHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHHHHhhHHHHH
Confidence            4555566677778888777788889999999999999877655543333221111  111222222   23333333333


Q ss_pred             cccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----------------C-------------CccCCh
Q psy817          643 GQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPS----------------E-------------DRFQNP  693 (854)
Q Consensus       643 ~~~~~~G~~v~m~~~~~~d~~~f~~i~~~~l~aF~~~f~~l~~~----------------~-------------~~f~~~  693 (854)
                      .+-+.+--.|-.+..-++.+...++|.+-+++-|+.-.-+||.+                .             ..|.+.
T Consensus      1241 Sra~glklVveTL~sSLkpIgnIvliccaffiiFgilgvqLFkgkfy~c~g~dtrnitnKSdc~aa~yRwvrhkyNfdnl 1320 (1956)
T KOG2302|consen 1241 SRAPGLKLVVETLISSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYHCLGVDTRNITNKSDCMAAPYRWVRHKYNFDNL 1320 (1956)
T ss_pred             hhcccHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHhcccceeccccccccccchhhhcccchhhhhhhcccchH
Confidence            33344444455666667777788888888888888888888862                1             137778


Q ss_pred             HHHHHHHHHHHhcCcchhhhhccCCC-----CCcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhHHH
Q psy817          694 IIGFINILVMMTGELNVNEVLLGTEA-----KPPV-LLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKTAGLDK  767 (854)
Q Consensus       694 ~~s~~~~~~~~~G~~~~~~~~~~~~~-----~~~~-~~~~~~~ilf~~f~~~~~ivLlNlLIA~~~~~~~~v~~~a~~~~  767 (854)
                      ..+++++|+...-+ +..++..++.+     ..|. -+..+-.+.|++|.+|+....+||+++..++.|.+-.++++.|.
T Consensus      1321 gqalmSLFvLaSkD-gWv~ImyDgldavavdqqPI~nhnpwmllYfIsfllIvsffVlnmfVgvvvenfhKcrqhqe~Ee 1399 (1956)
T KOG2302|consen 1321 GQALMSLFVLASKD-GWVNIMYDGLDAVAVDQQPILNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEE 1399 (1956)
T ss_pred             HHHHHHHHHHhccc-chhhhhccchhhceeeeeccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88899999866532 12222222111     1121 23345678999999999999999999999999999999999886


Q ss_pred             HHHH-HHHHHHHHHH
Q psy817          768 LVRQ-TELIHSLELA  781 (854)
Q Consensus       768 ~~~~-~~~i~~~e~~  781 (854)
                      -.+| -+.+.++|+.
T Consensus      1400 ArRreEKrLrrlekk 1414 (1956)
T KOG2302|consen 1400 ARRREEKRLRRLEKK 1414 (1956)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            6666 5667777774

>KOG2301|consensus

Probab=98.87  E-value=2.8e-08  Score=121.86  Aligned_cols=193  Identities=17%  Similarity=0.210  Sum_probs=140.9

Q ss_pred             HHHHHHHHHHHHHHHhhhhhhhhhhhhhchhhHHHHHHHHHHHHHHHh-ccCcccchhhhHHHHHHHHHHHHHHHHHccc
Q psy817          567 VLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCV-YTKRTYIWQNHVGAVAVLLGWSNLMGMIGQL  645 (854)
Q Consensus       567 ~~~~~~~~~~~~e~~~~~~~~~~~~y~~~~wN~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~ll~~~~~~  645 (854)
                      +...+...+.+.++..    .+.+.||++.||.+|++.+++.++..+. .....+.+.....-+..++.-.|++.++++.
T Consensus      1195 vft~~Ft~E~vLKiiA----~~~~~yf~~~WN~FDfvvvIlSIv~~~ls~~~~~~~~~~~~~~~~rl~rV~R~l~Li~~~ 1270 (1592)
T KOG2301|consen 1195 VFIVLFTIECILKVIA----LRFRGYFTSAWNVFDFVVTILSIVGIVLSEAVEKYESSPTLLRFLRLFRVGRFLRLIPQA 1270 (1592)
T ss_pred             HHHHHHHHHHHHHHHH----hhhhHhccccchheEeeeeeHhHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHhcccc
Confidence            3334444455555443    4678999999999999877665543222 1111133445566777777778888888888


Q ss_pred             CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------CCccCChHHHHHHHHHHHhcCcchhhhhcc-
Q psy817          646 PSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPS--------EDRFQNPIIGFINILVMMTGELNVNEVLLG-  716 (854)
Q Consensus       646 ~~~G~~v~m~~~~~~d~~~f~~i~~~~l~aF~~~f~~l~~~--------~~~f~~~~~s~~~~~~~~~G~~~~~~~~~~-  716 (854)
                      ..+-.+.-.+..-+.-+....++.+++++-||+..-++|+.        ...|+++..++..+|.+.+||---+ +..+ 
T Consensus      1271 ~~ir~LL~t~~~Sl~al~~i~lLl~ll~fiYAi~Gmq~Fg~Vkl~~i~~~~NF~tf~~a~i~LFr~~Tge~W~~-im~~~ 1349 (1592)
T KOG2301|consen 1271 KTIRTLLLTLMMSLPALFFIILLLFLLFFIYAIIGMQLFGYVKLGGINDHNNFRTFPNSMVVLFRCATGEGWND-IMDDC 1349 (1592)
T ss_pred             chhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhheeccccCCCcccccchhheeeeeehhhhhhHHH-HHHHH
Confidence            88888877777777788999999999999999999999853        4569999999999999999974322 2211 


Q ss_pred             ---CCCCCc--cc------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhh
Q psy817          717 ---TEAKPP--VL------LKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKTAG  764 (854)
Q Consensus       717 ---~~~~~~--~~------~~~~~~ilf~~f~~~~~ivLlNlLIA~~~~~~~~v~~~a~  764 (854)
                         .+.+.|  ..      .+..|++.|++|.+|.+.+++||+||++.+.|+-..++..
T Consensus      1350 l~s~p~Cdp~~~~~~~dCGn~~~Ai~YF~Sf~iIs~~IvvNLfVAVImeNFs~~t~~~s 1408 (1592)
T KOG2301|consen 1350 LNSKPFCDPDDGNNGTDCGNPTVAIIYFVSWILISSYIVVNLFVAVILENFSYATEDSS 1408 (1592)
T ss_pred             hcCCCCCCCCCCCcccccCCCCcceehhhHHHHHHHHHHHHHHHHHHHhhhhhhccccc
Confidence               111221  11      1567999999999999999999999999999999987766

>KOG3609|consensus

Probab=98.69  E-value=2.7e-06  Score=95.64  Aligned_cols=149  Identities=19%  Similarity=0.216  Sum_probs=83.2

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCC---CccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcC
Q psy817          246 PLHIAADRGLISCLKAILDSGMA---DVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQ  322 (854)
Q Consensus       246 ~L~~A~~~g~~~iv~~Ll~~~~~---~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~  322 (854)
                      ....|+++|+...|+..++....   ++|..+ .-|.++|+.|+.+.+.|++++|++++...       ..+|.+|+..|
T Consensus        28 ~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d-~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~~~   99 (822)
T KOG3609|consen   28 GFLLAHENGDVPLVAKALEYKAVSKLNINCRD-PLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIAVG   99 (822)
T ss_pred             HHHHHHHcCChHHHHHHHHhccccccchhccC-hHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHHHH
Confidence            34455555655555555544321   122222 33445555555555555555555544332       12555555555


Q ss_pred             CHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q psy817          323 SVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHG  402 (854)
Q Consensus       323 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g  402 (854)
                      ..+.|+.++.+........   .                      .+.+....-..+-||+.+||..+++||+++|+++|
T Consensus       100 ~v~~VE~ll~~~~~~~~~~---~----------------------~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg  154 (822)
T KOG3609|consen  100 SVPLVELLLVHFVDAPYLE---R----------------------SGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRG  154 (822)
T ss_pred             HHHHHHHHHhcccccchhc---c----------------------ccccCcccCCCCccHHHHHHHhcchHHHHHHHHcC
Confidence            5555555555422211000   0                      01111223346789999999999999999999999


Q ss_pred             CCccccCCCCCCHHHHHHhcCCcch
Q psy817          403 ADISSKTPSGSSALSIIMRNTPSSI  427 (854)
Q Consensus       403 a~~~~~~~~g~t~l~~a~~~~~~~~  427 (854)
                      +++.......+.+-.+.......+.
T Consensus       155 ~~i~~PH~~~C~C~~C~~~~~~dsl  179 (822)
T KOG3609|consen  155 HCIPIPHDIRCECKTCKRETVTDSL  179 (822)
T ss_pred             CCCCCCcccccCchHhhhccccCCc
Confidence            9988777666666666555544444

>PF13606 Ank_3: Ankyrin repeat

Probab=98.64  E-value=3.5e-08  Score=63.54  Aligned_cols=29  Identities=45%  Similarity=0.673  Sum_probs=20.1

Q ss_pred             CCccHHHHHHHcCCHHHHHHHHhCCCCcc
Q psy817          150 DKYGALHLAAFNGSIKGCSWLMLHGHDIN  178 (854)
Q Consensus       150 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~  178 (854)
                      +|+||||+||..|+.|+|++|+++|+|+|
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            36677777777777777777777776665

>KOG0782|consensus

Probab=98.62  E-value=1.2e-07  Score=99.84  Aligned_cols=120  Identities=23%  Similarity=0.156  Sum_probs=98.5

Q ss_pred             HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHH
Q psy817          214 VHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVEC  293 (854)
Q Consensus       214 L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~  293 (854)
                      +..|+..++.--++.+..+|-+.-.++.+.+|.||+|+..|+-++|++++++++.++-...++.|.|+||.|+..++-.+
T Consensus       870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~v  949 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAV  949 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHH
Confidence            55677777777777777788888888888899999999999999999999988655444445777889999988888888


Q ss_pred             HHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhC
Q psy817          294 LRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRK  333 (854)
Q Consensus       294 v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~  333 (854)
                      +++|++.|+.....|..|.||-.-|-+.|+.+...+|-.+
T Consensus       950 c~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~r  989 (1004)
T KOG0782|consen  950 CQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESR  989 (1004)
T ss_pred             HHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhhh
Confidence            9999999988888888899998888888888888887653

>KOG0783|consensus

Probab=98.57  E-value=2.7e-08  Score=109.42  Aligned_cols=84  Identities=29%  Similarity=0.443  Sum_probs=79.7

Q ss_pred             CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHH
Q psy817          236 PNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPL  315 (854)
Q Consensus       236 ~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L  315 (854)
                      .|.+|..|+|+||+|+..|..+++++|+++| ++++.++.+.|+||||.|+..|++|++-.||.+|+....+|++|..||
T Consensus        45 anikD~~GR~alH~~~S~~k~~~l~wLlqhG-idv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglspl  123 (1267)
T KOG0783|consen   45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHG-IDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPL  123 (1267)
T ss_pred             hhHHHhhccceeeeeeccchhHHHHHHHhcC-ceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHH
Confidence            5788999999999999999999999999995 999999999999999999999999999999999999999999999999


Q ss_pred             HHHHh
Q psy817          316 HLAAK  320 (854)
Q Consensus       316 ~~A~~  320 (854)
                      ...++
T Consensus       124 q~~~r  128 (1267)
T KOG0783|consen  124 QFLSR  128 (1267)
T ss_pred             HHHhh
Confidence            98775

>KOG0783|consensus

Probab=98.54  E-value=4.9e-08  Score=107.41  Aligned_cols=81  Identities=23%  Similarity=0.354  Sum_probs=40.9

Q ss_pred             CCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccC-CCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHH
Q psy817          305 NERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDC-DNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPI  383 (854)
Q Consensus       305 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L  383 (854)
                      |.+|..|+|+||+|+..|..+++++|+++|++++.+|. .|+||||.|+..|  +++++-+|+++|......|++|..||
T Consensus        46 nikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG--~idca~lLL~~g~SL~i~Dkeglspl  123 (1267)
T KOG0783|consen   46 NIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYG--NIDCASLLLSKGRSLRIKDKEGLSPL  123 (1267)
T ss_pred             hHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhc--hHHHHHHHHhcCCceEEecccCCCHH
Confidence            44555555555555555555555555555555554443 2444444444444  44444444444444444444444444


Q ss_pred             HHHH
Q psy817          384 HIAA  387 (854)
Q Consensus       384 ~~A~  387 (854)
                      ..-+
T Consensus       124 q~~~  127 (1267)
T KOG0783|consen  124 QFLS  127 (1267)
T ss_pred             HHHh
Confidence            4333

>KOG0818|consensus

Probab=98.52  E-value=4.1e-07  Score=94.75  Aligned_cols=97  Identities=22%  Similarity=0.259  Sum_probs=85.5

Q ss_pred             CCCCCCCCCcH------HHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCC
Q psy817          236 PNVLNNKGVSP------LHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNH  309 (854)
Q Consensus       236 ~~~~d~~g~t~------L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~  309 (854)
                      +..+|.+|.++      ||..++.|+++..-.|+..| +++|....+.|.||||.|++.|+..-+++|+=+|+|++..|.
T Consensus       120 ~~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lG-A~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~  198 (669)
T KOG0818|consen  120 LPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLG-AQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDS  198 (669)
T ss_pred             CCCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcc-cccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCC
Confidence            45567777774      88899999999888888886 999999889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCHHHHHHHHhC
Q psy817          310 KEQIPLHLAAKCQSVECMEMLLRK  333 (854)
Q Consensus       310 ~g~t~L~~A~~~~~~~~v~~Ll~~  333 (854)
                      .|+||+.+|-..||-++.+.|++.
T Consensus       199 ~GmtP~~~AR~~gH~~laeRl~e~  222 (669)
T KOG0818|consen  199 SGMTPVDYARQGGHHELAERLVEI  222 (669)
T ss_pred             CCCcHHHHHHhcCchHHHHHHHHH
Confidence            999999999999999888888763

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.50  E-value=1.7e-07  Score=62.34  Aligned_cols=32  Identities=38%  Similarity=0.419  Sum_probs=26.0

Q ss_pred             CCccHHHHHHHcCCHHHHHHHHhCCCCccccC
Q psy817          150 DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK  181 (854)
Q Consensus       150 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~  181 (854)
                      +|.||||+|+..|+.+++++|+++|++++..+
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d   32 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD   32 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence            47888888888888888888888888887654

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>PF13606 Ank_3: Ankyrin repeat

Probab=98.48  E-value=1.8e-07  Score=60.19  Aligned_cols=30  Identities=20%  Similarity=0.226  Sum_probs=28.2

Q ss_pred             cCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q psy817          120 EKTTALLWCVFVKREDLLDALHQLGADLSN  149 (854)
Q Consensus       120 ~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~  149 (854)
                      +|+||||+||+.|+.|+|++|+++|+|+|.
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~   30 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA   30 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence            489999999999999999999999999874

>KOG0818|consensus

Probab=98.46  E-value=5e-07  Score=94.07  Aligned_cols=82  Identities=26%  Similarity=0.235  Sum_probs=77.0

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCC----CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHhCCCHHH
Q psy817          124 ALLWCVFVKREDLLDALHQLGADLSN----DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGNYVDC  198 (854)
Q Consensus       124 ~L~~Aa~~g~~~iv~~Ll~~g~~~~~----~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~~~~~i  198 (854)
                      -||-.++.|+.+..-.|+..||++|.    .|.||||.|++.|+..-+++|+=.|+|+...+ +|+||+.+|-.+||.++
T Consensus       136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~l  215 (669)
T KOG0818|consen  136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHEL  215 (669)
T ss_pred             HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHH
Confidence            49999999999999999999999986    89999999999999999999999999999877 69999999999999999


Q ss_pred             HHHHHhC
Q psy817          199 AKFLIKN  205 (854)
Q Consensus       199 v~~Ll~~  205 (854)
                      .+.|++.
T Consensus       216 aeRl~e~  222 (669)
T KOG0818|consen  216 AERLVEI  222 (669)
T ss_pred             HHHHHHH
Confidence            9998875

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.40  E-value=3.8e-07  Score=60.66  Aligned_cols=33  Identities=36%  Similarity=0.543  Sum_probs=29.6

Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Q psy817          378 FGYSPIHIAALSELSQCVDCLIMHGADISSKTP  410 (854)
Q Consensus       378 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~  410 (854)
                      +|.||||+|+..|+.+++++|+++|++++.+|+
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~   33 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN   33 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence            488999999999999999999999999988774

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG2301|consensus

Probab=98.37  E-value=4.3e-06  Score=103.09  Aligned_cols=188  Identities=16%  Similarity=0.194  Sum_probs=125.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhchhhHHHHHHHHHHHHHHHhccCcccchhhhHHHHHHHHHHHHHHHH
Q psy817          562 ETVWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNLMGM  641 (854)
Q Consensus       562 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~y~~~~wN~~d~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ll~~  641 (854)
                      .....+...+...+...+++.    -+.+.||...||++|.+++++.++...       ...-.-.++--.+.-+|+...
T Consensus       476 ~~~~~vF~~lF~~Em~~ki~a----l~~~~yF~~~~n~fD~~iv~l~~~~~~-------~~~~~g~svLr~frllRIfkl  544 (1592)
T KOG2301|consen  476 YLGNVVFTGLFTVEMILKIYA----LGPRNYFRRGWNIFDLIIVLLSLLELL-------LKNVYGLSVLRSFRLLRIFKL  544 (1592)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH----cCcHHHHhhhcchheEEEEehhhHHhc-------ccchHHHHHHHHHHHHHHHHH
Confidence            333444455555566666554    478999999999999976653222221       111111222223333444445


Q ss_pred             HcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--------ccCChHHHHHHHHHHHhcCcchhhh
Q psy817          642 IGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSED--------RFQNPIIGFINILVMMTGELNVNEV  713 (854)
Q Consensus       642 ~~~~~~~G~~v~m~~~~~~d~~~f~~i~~~~l~aF~~~f~~l~~~~~--------~f~~~~~s~~~~~~~~~G~~~~~~~  713 (854)
                      .+..|++--++..+..-++-+...+++++++++-||+-..++|++..        .|.++..|+.++|..+.|+. .+ .
T Consensus       545 ~k~wp~l~~lv~~i~ns~~~l~~L~l~l~i~i~Ifa~~gmqlFg~~~n~~~~~~~~~~~fp~sfl~vFqlt~e~W-~e-v  622 (1592)
T KOG2301|consen  545 IKSWPTLNDLVKSIFNSGKALGNLVLFLFIFIFIFAAIGMQLFGGVYNLHCDIHWHFTDFPHSFLSVFQITCEEW-TD-V  622 (1592)
T ss_pred             HHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhhHHhhCcccCCCCCCccchhhCHHHHHHHHHHcCCch-HH-H
Confidence            55666777888888888888888888889999999999999997632        57789999999999444332 22 2


Q ss_pred             hccCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhHH
Q psy817          714 LLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKTAGLD  766 (854)
Q Consensus       714 ~~~~~~~~~~~~~~~~~ilf~~f~~~~~ivLlNlLIA~~~~~~~~v~~~a~~~  766 (854)
                      .++.....   ..++..+.|+.++++.+.|++|+.+|++++++..-+ .++.|
T Consensus       623 m~~~~~~~---~~~~~~i~Fi~~~l~gn~vvLnlFlAl~~~n~~~~e-l~~~e  671 (1592)
T KOG2301|consen  623 MWDCMEAA---GQPLCAIYFIAYFLFGNLVVLNLFLALILDNFESDE-LKKPE  671 (1592)
T ss_pred             HHHHHHHh---ccchhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhh-cCChh
Confidence            22211111   235678899999999999999999999999997766 43333

>KOG0506|consensus

Probab=98.33  E-value=6.3e-07  Score=93.02  Aligned_cols=94  Identities=21%  Similarity=0.316  Sum_probs=83.6

Q ss_pred             CCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHh-CCCCCccCCCCCCCHHHHH
Q psy817          308 NHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLK-WGANVNARDIFGYSPIHIA  386 (854)
Q Consensus       308 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~-~g~d~n~~d~~g~t~L~~A  386 (854)
                      +.++..++.+|++.|+...++.+.-.|.|++..|.+.+|+||.|+..|  +++++++|++ .+.+++.+|.+|+|||.-|
T Consensus       503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG--~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA  580 (622)
T KOG0506|consen  503 ENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEG--HVEVVKFLLNACKVDPDPKDRWGRTPLDDA  580 (622)
T ss_pred             cccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccC--ceeHHHHHHHHHcCCCChhhccCCCcchHh
Confidence            345667899999999999999999999999999999999999999999  7788999987 5889999999999999999


Q ss_pred             HHcCCHHHHHHHHHcCC
Q psy817          387 ALSELSQCVDCLIMHGA  403 (854)
Q Consensus       387 ~~~~~~~~v~~Ll~~ga  403 (854)
                      ...+|.+++++|-+.-.
T Consensus       581 ~~F~h~~v~k~L~~~~~  597 (622)
T KOG0506|consen  581 KHFKHKEVVKLLEEAQY  597 (622)
T ss_pred             HhcCcHHHHHHHHHHhc
Confidence            99999999999987643

>KOG0782|consensus

Probab=98.32  E-value=1.5e-06  Score=91.69  Aligned_cols=116  Identities=14%  Similarity=0.167  Sum_probs=67.2

Q ss_pred             HHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCC--CccCCCCCCCHHHHHHHcCCHHHH
Q psy817          318 AAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGAN--VNARDIFGYSPIHIAALSELSQCV  395 (854)
Q Consensus       318 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d--~n~~d~~g~t~L~~A~~~~~~~~v  395 (854)
                      |+..++.--++....+|-++-.++.+..+.||+|+..|  +-+++++++++|..  .+..|..|.|+||-|+..++..+.
T Consensus       873 av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg--~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc  950 (1004)
T KOG0782|consen  873 AVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTG--NGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVC  950 (1004)
T ss_pred             HHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcC--ChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHH
Confidence            33333333333333344444444455555555555555  44445555555432  244556677777777777777777


Q ss_pred             HHHHHcCCCccccCCCCCCHHHHHHhcCCcchHHhhhhcC
Q psy817          396 DCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLD  435 (854)
Q Consensus       396 ~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~  435 (854)
                      .+|++.|+.+...|..|.||-..|.+.+..+++..+..-.
T Consensus       951 ~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~rq  990 (1004)
T KOG0782|consen  951 QLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESRQ  990 (1004)
T ss_pred             HHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhhhh
Confidence            7777777777777777777777777777766666555443

>KOG0506|consensus

Probab=98.20  E-value=1.5e-06  Score=90.29  Aligned_cols=113  Identities=26%  Similarity=0.339  Sum_probs=87.6

Q ss_pred             CCHHHHHHHHHCCCCCCC----CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHH
Q psy817          221 NAVDCVQLLLSLQINPNV----LNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRI  296 (854)
Q Consensus       221 ~~~~~v~~Ll~~g~~~~~----~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~  296 (854)
                      .+.+.+..--+...|+..    ++.++..++++|+.+|++..++.+.-.+ .|++.++-+. +|+||.||..|+++++++
T Consensus       480 HNYD~L~h~~~~K~DPRR~~~~~~~~~~i~~~~aa~~GD~~alrRf~l~g-~D~~~~DyD~-RTaLHvAAaEG~v~v~kf  557 (622)
T KOG0506|consen  480 HNYDSLRHPDNRKIDPRREGGPRENDTVINVMYAAKNGDLSALRRFALQG-MDLETKDYDD-RTALHVAAAEGHVEVVKF  557 (622)
T ss_pred             cCchhhcccccccCCcccccCcccccchhhhhhhhhcCCHHHHHHHHHhc-cccccccccc-chhheeecccCceeHHHH
Confidence            344444444344455532    3345677899999999999998887766 7888776544 499999999999999999


Q ss_pred             HHhc-CCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCC
Q psy817          297 LLEN-HANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGS  335 (854)
Q Consensus       297 Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~  335 (854)
                      |++. +.+++.+|..|+|||.-|...+|.+++++|-+...
T Consensus       558 l~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~~~  597 (622)
T KOG0506|consen  558 LLNACKVDPDPKDRWGRTPLDDAKHFKHKEVVKLLEEAQY  597 (622)
T ss_pred             HHHHHcCCCChhhccCCCcchHhHhcCcHHHHHHHHHHhc
Confidence            9976 78889999999999999999999999999987643

>KOG0705|consensus

Probab=98.13  E-value=6.5e-06  Score=87.71  Aligned_cols=89  Identities=30%  Similarity=0.469  Sum_probs=77.0

Q ss_pred             HHHHHhcCCHHHHHHHHhCCCC--CC--CccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcC
Q psy817          315 LHLAAKCQSVECMEMLLRKGSQ--VN--ASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSE  390 (854)
Q Consensus       315 L~~A~~~~~~~~v~~Ll~~g~~--~~--~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~  390 (854)
                      |.-|+...++..+-+||.+|..  +|  ..+.+|+|+||.||..|  ++.+.++|+=+|+|+-++|..|+|||.||-+.|
T Consensus       628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~g--nVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~  705 (749)
T KOG0705|consen  628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKG--NVVLAQLLIWYGVDVMARDAHGRTALFYARQAG  705 (749)
T ss_pred             HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhc--chhHHHHHHHhCccceecccCCchhhhhHhhcc
Confidence            5567777888889999999873  33  34567899999999999  888899999999999999999999999999999


Q ss_pred             CHHHHHHHHHcCCCc
Q psy817          391 LSQCVDCLIMHGADI  405 (854)
Q Consensus       391 ~~~~v~~Ll~~ga~~  405 (854)
                      ..+|++.|+.+|...
T Consensus       706 sqec~d~llq~gcp~  720 (749)
T KOG0705|consen  706 SQECIDVLLQYGCPD  720 (749)
T ss_pred             cHHHHHHHHHcCCCc
Confidence            999999999999653

>KOG0705|consensus

Probab=98.12  E-value=6.7e-06  Score=87.62  Aligned_cols=90  Identities=27%  Similarity=0.338  Sum_probs=57.9

Q ss_pred             HHHHHHcCCHHHHHHHHHcCC-CCcccc-ccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCH
Q psy817          247 LHIAADRGLISCLKAILDSGM-ADVDIK-TKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSV  324 (854)
Q Consensus       247 L~~A~~~g~~~iv~~Ll~~~~-~~~~~~-~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~  324 (854)
                      |..|+...++..+-+||.+|. ..+|.. .+..|.|+||+||+.|++.+.++|+=+|+|+..+|..|+|+|.||-+.|..
T Consensus       628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sq  707 (749)
T KOG0705|consen  628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQ  707 (749)
T ss_pred             HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccH
Confidence            455666666666666666653 222222 233446777777777777777777777777777777777777777777777


Q ss_pred             HHHHHHHhCCCC
Q psy817          325 ECMEMLLRKGSQ  336 (854)
Q Consensus       325 ~~v~~Ll~~g~~  336 (854)
                      +++..|+++|+.
T Consensus       708 ec~d~llq~gcp  719 (749)
T KOG0705|consen  708 ECIDVLLQYGCP  719 (749)
T ss_pred             HHHHHHHHcCCC
Confidence            777777777653

>KOG2302|consensus

Probab=98.09  E-value=2.4e-05  Score=87.95  Aligned_cols=182  Identities=13%  Similarity=0.187  Sum_probs=104.0

Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhchhhHHHHHHHHHHHHHHHhcc---CcccchhhhHHHHHHHHHHHHHHHHHcccCc
Q psy817          571 LATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYT---KRTYIWQNHVGAVAVLLGWSNLMGMIGQLPS  647 (854)
Q Consensus       571 ~~~~~~~~e~~~~~~~~~~~~y~~~~wN~~d~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~ll~~~~~~~~  647 (854)
                      .++.+++.+..    ..|.++||+|-||.+|..++++.+..+..--   .......-      .++.-+|++.+.|+.+.
T Consensus      1483 vfV~EaV~klv----afG~rrFfkdrwnqldlaivlls~mgitleeie~naalpinp------tiirimrvlriarvlkl 1552 (1956)
T KOG2302|consen 1483 VFVLEAVLKLV----AFGERRFFKDRWNQLDLAIVLLSVMGITLEEIEINAALPINP------TIIRIMRVLRIARVLKL 1552 (1956)
T ss_pred             hhHHHHHHHHH----HHhHHHHHhhhhhhhhHHHHHHHHhcccHhheeecccCCCCh------HHHHHHHHHHHHHHHHH
Confidence            33444554444    3578999999999999977655443221100   00001111      11222333333333332


Q ss_pred             c------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------------CCccCChHHHHHHHHHHHhcC
Q psy817          648 V------GTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPS--------------EDRFQNPIIGFINILVMMTGE  707 (854)
Q Consensus       648 ~------G~~v~m~~~~~~d~~~f~~i~~~~l~aF~~~f~~l~~~--------------~~~f~~~~~s~~~~~~~~~G~  707 (854)
                      +      ..+.-.+...+-.+...-++|.++++-||.-..-||+.              .-.|+++..++.++|...+|+
T Consensus      1553 lkmatgmralldtvvqalpqvgnlgllfmllffiyaalgvelfg~lec~e~npceglsrhatf~nfgmafltlfrvstgd 1632 (1956)
T KOG2302|consen 1553 LKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLECNEENPCEGLSRHATFENFGMAFLTLFRVSTGD 1632 (1956)
T ss_pred             HHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHhcccccCCCCCccccccccchhhhchHhhhheeeccCC
Confidence            2      11222222222233344455555556666666667754              124999999999999999996


Q ss_pred             cchhhhhcc----CCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhh
Q psy817          708 LNVNEVLLG----TEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKTA  763 (854)
Q Consensus       708 ~~~~~~~~~----~~~~~~~~~~~~~~ilf~~f~~~~~ivLlNlLIA~~~~~~~~v~~~a  763 (854)
                      = ...+.-+    -.....-..++++.+.|+.|++..-.||+|..||+.....++-.++|
T Consensus      1633 n-wngimkdtlrdc~~e~~cls~~~sp~yfvsfvltaqfvlvnvvvavlmkhleesnkea 1691 (1956)
T KOG2302|consen 1633 N-WNGIMKDTLRDCTHEESCLSQFVSPLYFVSFVLTAQFVLVNVVVAVLMKHLEESNKEA 1691 (1956)
T ss_pred             c-ccchhhhhHhhcccchhhhhhhccchhhhhhhhhhhhHHHHHHHHHHHHHHHhhchhh
Confidence            2 2222211    01111122357899999999999999999999999988877755554

>KOG0522|consensus

Probab=97.93  E-value=2.2e-05  Score=83.51  Aligned_cols=110  Identities=22%  Similarity=0.245  Sum_probs=73.4

Q ss_pred             cHHHHHHHcCCHHHHHHHH--hcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCC
Q psy817          280 TALHLAAENGYVECLRILL--ENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNIL  357 (854)
Q Consensus       280 t~L~~A~~~g~~~~v~~Ll--~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~  357 (854)
                      -|+|.++.....+-...++  +.+..++.+|..|.||||+|+..|+.+.++.|+.+|+++..+|..|++|||.|+..|  
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g--   99 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTG--   99 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcC--
Confidence            3588887776655544433  234457778888888888888888888888888888888888888888888888888  


Q ss_pred             ChHHHHHHHhCCCCCccCCCCCCCHHH-HHHHcCCHHHHHHHHHcC
Q psy817          358 SVHPLEILLKWGANVNARDIFGYSPIH-IAALSELSQCVDCLIMHG  402 (854)
Q Consensus       358 ~~~~v~~Ll~~g~d~n~~d~~g~t~L~-~A~~~~~~~~v~~Ll~~g  402 (854)
                      +-+++..++.+--           ... .-...+...+++.|.+.+
T Consensus       100 ~~q~i~~vlr~~~-----------~q~~~~~~~~~p~ll~~l~~~~  134 (560)
T KOG0522|consen  100 NEQIITEVLRHLK-----------YQAWEKWERRLPRLLAKLSEMP  134 (560)
T ss_pred             CHHHHHHHHHHhH-----------HHHHHHHHhcchHHHHHHHhCc
Confidence            4444554444310           011 112345566777777665

>KOG0511|consensus

Probab=97.83  E-value=5.6e-05  Score=76.70  Aligned_cols=71  Identities=25%  Similarity=0.351  Sum_probs=59.9

Q ss_pred             cHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHH
Q psy817          280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHA  350 (854)
Q Consensus       280 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~  350 (854)
                      --|..||+.|+++.|+.|++.|.++|..|....+||.+|+.+||.+++++|+++|+-.+....+|..++.-
T Consensus        38 ~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~Yg  108 (516)
T KOG0511|consen   38 GELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCHYG  108 (516)
T ss_pred             HHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhhhh
Confidence            45888999999999999999999999999999999999999999999999999998665555556655443

>KOG3733|consensus

Probab=97.82  E-value=0.00066  Score=70.21  Aligned_cols=134  Identities=11%  Similarity=0.218  Sum_probs=105.1

Q ss_pred             HHHHHHHHHHHHHHHHHcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CccCChHHHHHHHHHHH
Q psy817          626 VGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSE-DRFQNPIIGFINILVMM  704 (854)
Q Consensus       626 ~~a~~~~l~~~~ll~~~~~~~~~G~~v~m~~~~~~d~~~f~~i~~~~l~aF~~~f~~l~~~~-~~f~~~~~s~~~~~~~~  704 (854)
                      +...+.++.|+-++.+++.|+.-..++..+.+.+..+++|..--.++.+||....|++++.+ +.|.++-.....+|...
T Consensus       378 ~LGtstLLVW~GVIRYLgfF~~YNvlIlTl~~alPkVlRFc~ca~mIYlGy~FCGWIVLGPYHdKFrsLntvsECLFSLI  457 (566)
T KOG3733|consen  378 LLGTSTLLVWFGVIRYLGFFKTYNVLILTLKKALPKVLRFCCCAAMIYLGYCFCGWIVLGPYHDKFRSLNTVSECLFSLI  457 (566)
T ss_pred             HhCcchhHHHHHHHHHHHHHHhhhHHHHHHHhhhHHHHHHHHHHHHHHHHHhheeeEEecchHHhhhhHHHHHHHHHHhh
Confidence            34567789999999999999999999999999999999999999999999999999998764 67888888777888877


Q ss_pred             hcCcchhhhhccCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHh
Q psy817          705 TGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHK  761 (854)
Q Consensus       705 ~G~~~~~~~~~~~~~~~~~~~~~~~~ilf~~f~~~~~ivLlNlLIA~~~~~~~~v~~  761 (854)
                      -|+=-|..+..-..+  ....-+.+.+...+|+-+-.-+.|-|+||++.++|+.|++
T Consensus       458 NGDDMFaTFA~mqqk--S~lvWlFsqiYLYSFISLfIYmvLSLFIAlItdaYDTIK~  512 (566)
T KOG3733|consen  458 NGDDMFATFATMQQK--STLVWLFSQIYLYSFISLFIYMVLSLFIALITDAYDTIKA  512 (566)
T ss_pred             CchhHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH
Confidence            776444433221111  1111134566666777777777889999999999999975

>KOG0521|consensus

Probab=97.79  E-value=2.3e-05  Score=91.41  Aligned_cols=90  Identities=33%  Similarity=0.344  Sum_probs=65.1

Q ss_pred             CCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHH
Q psy817          308 NHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAA  387 (854)
Q Consensus       308 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~  387 (854)
                      -..|.|++|.|+..|..-++++|+++|+++|..|..|++|+|.+...|  ....+..++++|++.+..+.+|.+|+++|.
T Consensus       653 ~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g--~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~  730 (785)
T KOG0521|consen  653 LCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASG--HTSIACLLLKRGADPNAFDPDGKLPLDIAM  730 (785)
T ss_pred             hhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhc--ccchhhhhccccccccccCccCcchhhHHh
Confidence            345677777777777777777777777777777777777777777777  445577777777777777777777777776


Q ss_pred             HcCCHHHHHHHH
Q psy817          388 LSELSQCVDCLI  399 (854)
Q Consensus       388 ~~~~~~~v~~Ll  399 (854)
                      ...+.+++-++.
T Consensus       731 ~~~~~d~~~l~~  742 (785)
T KOG0521|consen  731 EAANADIVLLLR  742 (785)
T ss_pred             hhccccHHHHHh
Confidence            666655555443

>KOG0521|consensus

Probab=97.77  E-value=3.8e-05  Score=89.54  Aligned_cols=92  Identities=29%  Similarity=0.384  Sum_probs=79.5

Q ss_pred             cCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Q psy817          341 DCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIM  420 (854)
Q Consensus       341 ~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~  420 (854)
                      -..|.|++|.|+..+  .....++|+++|+++|..|..|+||+|.+...|+...+..|+++|++.++.+.+|.+++++|.
T Consensus       653 ~~~~~s~lh~a~~~~--~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~  730 (785)
T KOG0521|consen  653 LCIGCSLLHVAVGTG--DSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAM  730 (785)
T ss_pred             hhcccchhhhhhccc--hHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHh
Confidence            346789999999998  677799999999999999999999999999999999999999999999999999999999997


Q ss_pred             hcCCcchHHhhhhc
Q psy817          421 RNTPSSISSVRKKL  434 (854)
Q Consensus       421 ~~~~~~~~~~~~~~  434 (854)
                      ...+.+++.++...
T Consensus       731 ~~~~~d~~~l~~l~  744 (785)
T KOG0521|consen  731 EAANADIVLLLRLA  744 (785)
T ss_pred             hhccccHHHHHhhh
Confidence            77666666555544

>KOG0522|consensus

Probab=97.76  E-value=6.2e-05  Score=80.28  Aligned_cols=54  Identities=37%  Similarity=0.454  Sum_probs=28.7

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHh
Q psy817          279 VTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLR  332 (854)
Q Consensus       279 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~  332 (854)
                      .||||+|+..|+.+.++.|+.+|+++..+|..|++|||.|+..|+.+++..++.
T Consensus        56 ~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr  109 (560)
T KOG0522|consen   56 RTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLR  109 (560)
T ss_pred             CccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHHHHH
Confidence            355555555555555555555555555555555555555555555554444443

>KOG2384|consensus

Probab=97.63  E-value=0.00014  Score=67.11  Aligned_cols=64  Identities=23%  Similarity=0.319  Sum_probs=35.6

Q ss_pred             CCccCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHhcCCcchHHhhhhc
Q psy817          371 NVNARDIFGYSPIHIAALSELSQCVDCLIMHG-ADISSKTPSGSSALSIIMRNTPSSISSVRKKL  434 (854)
Q Consensus       371 d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~  434 (854)
                      ++|.+|..|+||++.|+..|..+.+.+|+.+| +++...|..|.+++.+|.+.+..+.+..+...
T Consensus         4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~   68 (223)
T KOG2384|consen    4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN   68 (223)
T ss_pred             CccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence            45555555555555555555555555555555 55555555555555555555555555544444

>KOG0511|consensus

Probab=97.62  E-value=0.00014  Score=74.02  Aligned_cols=66  Identities=32%  Similarity=0.390  Sum_probs=35.4

Q ss_pred             HHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCH
Q psy817          348 LHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSA  415 (854)
Q Consensus       348 L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~  415 (854)
                      |-.||+.|  +++.++.|++.|.++|..|.....||.+|+..||.++|++|+++||-.+.-.-+|..+
T Consensus        40 lceacR~G--D~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC  105 (516)
T KOG0511|consen   40 LCEACRAG--DVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRC  105 (516)
T ss_pred             HHHHhhcc--cHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchh
Confidence            44555555  5555555555555555555555555555555555555555555555444333344433

>KOG2384|consensus

Probab=97.57  E-value=0.00017  Score=66.59  Aligned_cols=72  Identities=26%  Similarity=0.291  Sum_probs=58.6

Q ss_pred             CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q psy817          233 QINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCN  305 (854)
Q Consensus       233 g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~  305 (854)
                      +.++|.+|..|+||++.|+..|+.+.+.+|+.+|.+.+...+ ..+.+++.+|-+.|..++++.|.++-.+-.
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d-~ssldaaqlaek~g~~~fvh~lfe~~~ets   73 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTD-ESSLDAAQLAEKGGAQAFVHSLFENDRETS   73 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccc-cccchHHHHHHhcChHHHHHHHHHHhccCC
Confidence            457888899999999999999999999999988867777665 456688899999999999998888755433

>KOG0520|consensus

Probab=97.56  E-value=9.9e-05  Score=85.33  Aligned_cols=127  Identities=24%  Similarity=0.289  Sum_probs=102.3

Q ss_pred             cCCCCCCCCCHHHHHHhcCCHHHHHHHHhC-CCCCCCccCCCCcHHHHHHhcCCCChHHHHH-HHhCCCCCccCCCCCCC
Q psy817          304 CNERNHKEQIPLHLAAKCQSVECMEMLLRK-GSQVNASDCDNRTPLHASLSKNILSVHPLEI-LLKWGANVNARDIFGYS  381 (854)
Q Consensus       304 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~-Ll~~g~d~n~~d~~g~t  381 (854)
                      .......|++.+|+++..+..-.++.+++- |......|.+|...+|.++..+.   +..-+ ..-.|..++.+|..|+|
T Consensus       567 ~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~---ewA~ll~~~~~~ai~i~D~~G~t  643 (975)
T KOG0520|consen  567 SSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGY---EWAFLPISADGVAIDIRDRNGWT  643 (975)
T ss_pred             cccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCC---ceeEEEEeecccccccccCCCCc
Confidence            455677899999999999999999999985 77777788888999999655542   22333 34468889999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCcc------ccCCCCCCHHHHHHhcCCcchHHhhhh
Q psy817          382 PIHIAALSELSQCVDCLIMHGADIS------SKTPSGSSALSIIMRNTPSSISSVRKK  433 (854)
Q Consensus       382 ~L~~A~~~~~~~~v~~Ll~~ga~~~------~~~~~g~t~l~~a~~~~~~~~~~~~~~  433 (854)
                      |||||+.+|+..++..|.+-|++..      ..+..|.|+-+.|..+++..+...+..
T Consensus       644 pL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse  701 (975)
T KOG0520|consen  644 PLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSE  701 (975)
T ss_pred             ccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhh
Confidence            9999999999999999998886643      345579999999999998887766544

>KOG3713|consensus

Probab=97.44  E-value=0.011  Score=63.65  Aligned_cols=197  Identities=16%  Similarity=0.148  Sum_probs=121.3

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhchhhHHHHHHHHHHHHHHHhccCcc---cchhhhHHHHHHH---H
Q psy817          560 FMETVWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRT---YIWQNHVGAVAVL---L  633 (854)
Q Consensus       560 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~y~~~~wN~~d~~~~~~~~~~~~~~~~~~---~~~~~~~~a~~~~---l  633 (854)
                      ...+++.+.++++.++.+..+..   .....+|+++.-|++|++.++-+++-........   ... ..++-+.-+   +
T Consensus       241 ~l~~vE~vCi~WFT~E~llR~~~---~P~k~~F~k~pLNIIDllAIlPFYielll~~~~~~~~~~l-~~~~~vvrvlR~l  316 (477)
T KOG3713|consen  241 ILTYVETVCIAWFTFEYLLRFLV---APNKLEFFKSPLNIIDLLAILPFYLELLLTLFGGESLKEL-ENAGLVVRVLRVL  316 (477)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHc---CchHHHHHhCcchHHHHHHHHHHHHHHHHHHhccchHHHH-hhhhhhHHHHHHH
Confidence            46677888888888888877765   4778899999999999998876655333221111   111 112222222   3


Q ss_pred             HHHHHHHHHcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--CccCChHHHHHHHHHHHhcCcchh
Q psy817          634 GWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSE--DRFQNPIIGFINILVMMTGELNVN  711 (854)
Q Consensus       634 ~~~~ll~~~~~~~~~G~~v~m~~~~~~d~~~f~~i~~~~l~aF~~~f~~l~~~~--~~f~~~~~s~~~~~~~~~G~~~~~  711 (854)
                      --+|++.+.|-+..+-.+...+.+-.+.+.-.++++.+-++-||...|.+=.+.  ..|.++..++.=....|+ .+.|+
T Consensus       317 RI~RI~KLaRhS~GLr~lg~Tlr~S~~ElglLllfL~~GI~iFStlvY~~Ek~~~~~~FtSIPa~~WWaiVTMT-TVGYG  395 (477)
T KOG3713|consen  317 RILRIFKLARHSTGLRTLGLTLRRSYRELGLLLLFLAVGIVIFSTLVYFAEKDEPDTKFTSIPAGFWWAVVTMT-TVGYG  395 (477)
T ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccchhheeeEEEe-eeccc
Confidence            333444444556666778888888888888877777777888888777775443  237664433322111111 13343


Q ss_pred             hhhccCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhHHHHHHH
Q psy817          712 EVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKTAGLDKLVRQ  771 (854)
Q Consensus       712 ~~~~~~~~~~~~~~~~~~~ilf~~f~~~~~ivLlNlLIA~~~~~~~~v~~~a~~~~~~~~  771 (854)
                      |+       .|..  +.|.++ +.=.++.-|+.+=|=|.+++|.|.+....+..+....+
T Consensus       396 Dm-------~P~T--~~Gklv-as~cil~GVLvlAlPItiIv~nF~~~y~~~k~~~~~~~  445 (477)
T KOG3713|consen  396 DM-------VPVT--VLGKLV-ASLCILCGVLVLALPITIIVNNFSMYYSELKAREKAPK  445 (477)
T ss_pred             Cc-------cccc--cchHHH-HHHHHHHhHHHhhcchHhHhhhHHHHHHHHHHHHHhhh
Confidence            33       1221  345543 44455667788889999999999999877655544333

>KOG0520|consensus

Probab=97.05  E-value=0.00088  Score=77.80  Aligned_cols=123  Identities=20%  Similarity=0.181  Sum_probs=80.1

Q ss_pred             CCcCcHHHHHHHcCCHHHHHHHHhc-CCCcCCCCCCCCCHHHHHHhcCCHHHHHHHH-hCCCCCCCccCCCCcHHHHHHh
Q psy817          276 ERRVTALHLAAENGYVECLRILLEN-HANCNERNHKEQIPLHLAAKCQSVECMEMLL-RKGSQVNASDCDNRTPLHASLS  353 (854)
Q Consensus       276 ~~~~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~a~~  353 (854)
                      ..|++-+|+++..++.-.++.+++- |......|.+|...+|+ |..++++.+-++. -.|..++.+|..|+||||+|+.
T Consensus       572 ~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~  650 (975)
T KOG0520|consen  572 FRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAF  650 (975)
T ss_pred             CcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccchHhh
Confidence            4456777777777777777777664 54455556666666666 3345555444443 3566677777777777777777


Q ss_pred             cCCCChHHHHHHHhCCCCC------ccCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q psy817          354 KNILSVHPLEILLKWGANV------NARDIFGYSPIHIAALSELSQCVDCLIMH  401 (854)
Q Consensus       354 ~~~~~~~~v~~Ll~~g~d~------n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~  401 (854)
                      +|  ...++..|.+.|++.      +..+-.|.|+-.+|..+|+..+..+|-+.
T Consensus       651 ~G--~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  651 RG--REKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             cC--HHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            77  445566676665543      33444688888888888888888777665

>smart00248 ANK ankyrin repeats

Probab=96.34  E-value=0.0058  Score=38.28  Aligned_cols=27  Identities=41%  Similarity=0.501  Sum_probs=17.2

Q ss_pred             CccHHHHHHHcCCHHHHHHHHhCCCCc
Q psy817          151 KYGALHLAAFNGSIKGCSWLMLHGHDI  177 (854)
Q Consensus       151 g~t~L~~A~~~g~~~iv~~Ll~~g~~~  177 (854)
                      |.||+|+|+..|+.++++.|+++|.++
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~   28 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGADI   28 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            556666666666666666666666544

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=96.34  E-value=0.049  Score=50.83  Aligned_cols=74  Identities=9%  Similarity=0.002  Sum_probs=51.7

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCccHHHHHHHcCCHHHHHHHHhCCCCccccCCCccHHHHHHhCCCHHH
Q psy817          121 KTTALLWCVFVKREDLLDALHQLGADLSNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDC  198 (854)
Q Consensus       121 ~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~i  198 (854)
                      -.-.+..|+.++...+++..-+...+--...++-...||+..+.|+|+|.-++   .. ..+-.+-...|...++++.
T Consensus        46 ~~CLl~HAVk~nmL~ILqkyke~L~~~~~~~q~LFElAC~~qkydiV~WI~qn---L~-i~~~~~iFdIA~~~kDlsL  119 (192)
T PF03158_consen   46 MWCLLYHAVKYNMLSILQKYKEDLENERYLNQELFELACEEQKYDIVKWIGQN---LH-IYNPEDIFDIAFAKKDLSL  119 (192)
T ss_pred             HHHHHHHHHHcCcHHHHHHHHHHhhcchhHHHHHHHHHHHHccccHHHHHhhc---cC-CCCchhhhhhhhhccchhH
Confidence            34567778889999998887766443222456778899999999999999433   21 1233566778888877765

These proteins may be involved in promoting survival of infected macrophages [].

>KOG0498|consensus

Probab=96.22  E-value=0.47  Score=55.23  Aligned_cols=197  Identities=12%  Similarity=0.123  Sum_probs=101.5

Q ss_pred             hhhhhchhhHHHHHHHHHHHHHHHhccCcccchhhhHHHHHHHHHHHHHHHHHcccCccchHHHHHHHHH----HHHHHH
Q psy817          590 REYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQ----LEFLKL  665 (854)
Q Consensus       590 ~~y~~~~wN~~d~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ll~~~~~~~~~G~~v~m~~~~~----~d~~~f  665 (854)
                      .+|++ .|-++|++..+=+=.+..+..............+.-++.+.|+..+.|..+.+-=+....+-+.    .-+.+-
T Consensus       159 ~rYl~-twFiiDlis~lP~~~i~~~~~~~~~~~~~~~~~l~~il~~~rL~Rl~Rv~~l~~r~~k~~~~v~~~awa~~a~l  237 (727)
T KOG0498|consen  159 KRYLK-TWFLIDLISTLPFDQIVVLVVIGSTSLALESTILVGILLLQRLPRLRRVIPLFARLEKDTGFVYETAWAGAALL  237 (727)
T ss_pred             HHHHh-hhHHHHHHHhcChhhheeeeeecccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHH
Confidence            57988 8999998654210000000000000011122245667777777777777765544433333222    112233


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCC--------------------Cc----cCChHHHHHHHHHHHhcCcchhhhhccCCCCC
Q psy817          666 FQAYICLLVGFTLTFCIVFPSE--------------------DR----FQNPIIGFINILVMMTGELNVNEVLLGTEAKP  721 (854)
Q Consensus       666 ~~i~~~~l~aF~~~f~~l~~~~--------------------~~----f~~~~~s~~~~~~~~~G~~~~~~~~~~~~~~~  721 (854)
                      +++|++.-=..|+..|.+-...                    ..    |..+....--.+.+-+|--.+..+-.+..   
T Consensus       238 l~~~~l~sH~~gc~wYlia~~~~~~~~~~~tw~~~l~~~~~~~~~~~~fg~~s~~~kY~~aLyw~l~tLstvG~g~~---  314 (727)
T KOG0498|consen  238 LSVYLLASHWAGCIWYLIAIERPASCPRKATWLGSLGRLLSCYNLSFTFGIYSLALKYVYALYWGLSTLSTVGYGLV---  314 (727)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccccCccccccccccccccccCcccccccchhHHHHHHHHHHHHhhHhhhccCCcc---
Confidence            3333333333445555543111                    01    33333333333333333333333322211   


Q ss_pred             ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHhhh
Q psy817          722 PVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKTAGLDKLVRQTELIHSLELALFQGYLPNRIVSMLKS  797 (854)
Q Consensus       722 ~~~~~~~~~ilf~~f~~~~~ivLlNlLIA~~~~~~~~v~~~a~~~~~~~~~~~i~~~e~~l~~~~lp~~~~~~~~~  797 (854)
                        .....+-++|.+++++...+|.=+|||=|..-.|.....-  +....+   +.+.|+.|....||++++++++.
T Consensus       315 --~s~~~~E~iFsi~~mi~GllL~A~lIGNmt~~iqs~tsR~--~~~r~k---~rd~e~~m~~~~LP~~LRqRi~~  383 (727)
T KOG0498|consen  315 --HANNMGEKIFSIFIMLFGLLLFAYLIGNMTALLQSLTSRT--EEMRDK---MRDAEQWMSRRQLPPDLRQRIRR  383 (727)
T ss_pred             --CCCCcHHHHHHHHHHHHhHHHHHHHHhhHHHhHHHHhHHH--HHHHHH---HHHHHHHHHhccCCHHHHHHHHH
Confidence              1124588999999999999999999999999999887532  222222   22334444456799999987754

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=96.18  E-value=0.046  Score=51.02  Aligned_cols=46  Identities=24%  Similarity=0.284  Sum_probs=36.2

Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHh
Q psy817          281 ALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLR  332 (854)
Q Consensus       281 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~  332 (854)
                      -|..|+..|..+.+...+++|.+++.      ++|..|+..++-.++.+++.
T Consensus       146 hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  146 HLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR  191 (192)
T ss_pred             HHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence            46778888888888888888877653      68888888888888887764

These proteins may be involved in promoting survival of infected macrophages [].

>KOG2505|consensus

Probab=96.07  E-value=0.0071  Score=64.33  Aligned_cols=63  Identities=24%  Similarity=0.289  Sum_probs=53.6

Q ss_pred             ChHHHHHHHhCCCCCcc------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Q psy817          358 SVHPLEILLKWGANVNA------RDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIM  420 (854)
Q Consensus       358 ~~~~v~~Ll~~g~d~n~------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~  420 (854)
                      ....++.|.+++.+.|-      .+.-..|+||+|+.+|..++|.+||+.|+|+..+|..|.||.+.+.
T Consensus       403 ~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  403 EPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             chhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence            34568888888887653      2334679999999999999999999999999999999999999876

>smart00248 ANK ankyrin repeats

Probab=95.81  E-value=0.016  Score=36.11  Aligned_cols=29  Identities=38%  Similarity=0.519  Sum_probs=24.7

Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Q psy817          378 FGYSPIHIAALSELSQCVDCLIMHGADIS  406 (854)
Q Consensus       378 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~  406 (854)
                      .|.||+|+|+..++.++++.|+++|.+++
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            36789999999999999999999887654

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=95.68  E-value=0.087  Score=50.55  Aligned_cols=119  Identities=20%  Similarity=0.205  Sum_probs=78.4

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHH
Q psy817          246 PLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVE  325 (854)
Q Consensus       246 ~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~  325 (854)
                      .|.-|+...+.+-+.-++...         ....++|-+|+.++..+++-+|+.+= +....|        .|.....+.
T Consensus       156 sledAV~AsN~~~i~~~VtdK---------kdA~~Am~~si~~~K~dva~~lls~f-~ft~~d--------v~~~~~~~y  217 (284)
T PF06128_consen  156 SLEDAVKASNYEEISNLVTDK---------KDAHQAMWLSIGNAKEDVALYLLSKF-NFTKQD--------VASMEKELY  217 (284)
T ss_pred             cHHHHHhhcCHHHHHHHhcch---------HHHHHHHHHHhcccHHHHHHHHHhhc-ceecch--------hhhcCcchh
Confidence            466777777777777776543         22337888888888888888888641 111222        222222333


Q ss_pred             HHHHHHh-CCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCC-CCccC---CCCCCCHHHHHHHcCCHHHHHHHHH
Q psy817          326 CMEMLLR-KGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGA-NVNAR---DIFGYSPIHIAALSELSQCVDCLIM  400 (854)
Q Consensus       326 ~v~~Ll~-~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~-d~n~~---d~~g~t~L~~A~~~~~~~~v~~Ll~  400 (854)
                      -++++|. +|+                      +..+++..+++|. ++|.+   -+.|.|-|.-|..+++.+++.+|++
T Consensus       218 dieY~LS~h~a----------------------~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk  275 (284)
T PF06128_consen  218 DIEYLLSEHSA----------------------SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLK  275 (284)
T ss_pred             hHHHHHhhcCC----------------------cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHH
Confidence            4555554 333                      4456777777773 66643   4579999999999999999999999


Q ss_pred             cCCC
Q psy817          401 HGAD  404 (854)
Q Consensus       401 ~ga~  404 (854)
                      +||-
T Consensus       276 ~GA~  279 (284)
T PF06128_consen  276 YGAI  279 (284)
T ss_pred             cCcc
Confidence            9984

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>KOG2505|consensus

Probab=95.60  E-value=0.018  Score=61.31  Aligned_cols=41  Identities=27%  Similarity=0.511  Sum_probs=24.1

Q ss_pred             chHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q psy817          211 ETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAA  251 (854)
Q Consensus       211 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~  251 (854)
                      .|+||+|+..|..++|.+||++|+|+...|..|+||...+.
T Consensus       431 sT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  431 STFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             chHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence            45566666666666666666666666555666666555554

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=95.30  E-value=0.087  Score=50.54  Aligned_cols=87  Identities=20%  Similarity=0.138  Sum_probs=47.3

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHcC----CCCCC--CCccHHHHHHH--cCCHHHHHHHHhCC-CCccc----cCCCccHHH
Q psy817          122 TTALLWCVFVKREDLLDALHQLG----ADLSN--DKYGALHLAAF--NGSIKGCSWLMLHG-HDINF----TKDSYTPLH  188 (854)
Q Consensus       122 ~t~L~~Aa~~g~~~iv~~Ll~~g----~~~~~--~g~t~L~~A~~--~g~~~iv~~Ll~~g-~~~~~----~~~g~t~L~  188 (854)
                      .+++-+|..++..+++-+|+.+=    .|+-.  .+.--+.++..  +.+..++++.+++| +++|.    .+.|.|-|.
T Consensus       180 ~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLD  259 (284)
T PF06128_consen  180 HQAMWLSIGNAKEDVALYLLSKFNFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLD  259 (284)
T ss_pred             HHHHHHHhcccHHHHHHHHHhhcceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchHHH
Confidence            46777777777777777777651    11100  12222333332  23456666666665 45553    134666666


Q ss_pred             HHHhCCCHHHHHHHHhCCCC
Q psy817          189 FAVLGNYVDCAKFLIKNKAH  208 (854)
Q Consensus       189 ~A~~~~~~~iv~~Ll~~~~~  208 (854)
                      -|+..++-+++.+|+++|+-
T Consensus       260 NA~Ky~~~emi~~Llk~GA~  279 (284)
T PF06128_consen  260 NAMKYKNSEMIAFLLKYGAI  279 (284)
T ss_pred             hHHhcCcHHHHHHHHHcCcc
Confidence            66666666666666666653

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>KOG1545|consensus

Probab=94.98  E-value=0.44  Score=49.02  Aligned_cols=131  Identities=15%  Similarity=0.108  Sum_probs=71.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhchhhHHHHHHHHHHHHHHHhccCc---ccchhhhHHHHHHHHHHHHHHH
Q psy817          564 VWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKR---TYIWQNHVGAVAVLLGWSNLMG  640 (854)
Q Consensus       564 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~y~~~~wN~~d~~~~~~~~~~~~~~~~~---~~~~~~~~~a~~~~l~~~~ll~  640 (854)
                      ++.+.++++.++++..++.   ..+.-.+|+++-|++|++.|+=+|+....-...   ....+.+-+++|+ |.-+||..
T Consensus       258 VEt~CIiWFtfEllvRf~a---CPsK~~Ff~nimNiIDiVaI~PyFitlgtela~q~g~g~~gqqaMSlAI-LRViRLVR  333 (507)
T KOG1545|consen  258 VETLCIIWFTFELLVRFFA---CPSKATFFRNIMNIIDIVAIIPYFITLGTELAEQQGGGGQGQQAMSLAI-LRVIRLVR  333 (507)
T ss_pred             HHHHHHHHHhHHHHHHHhc---CccHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCccchhhhhHHH-HHHHHHHH
Confidence            4455566667777777664   356678999999999999988777644321111   1111234444443 33445555


Q ss_pred             HHcccC------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CCccCChHHHHH
Q psy817          641 MIGQLP------SVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPS--EDRFQNPIIGFI  698 (854)
Q Consensus       641 ~~~~~~------~~G~~v~m~~~~~~d~~~f~~i~~~~l~aF~~~f~~l~~~--~~~f~~~~~s~~  698 (854)
                      .+|.|+      .+-++-..+..-++++.-.++++++-++=|+.|.|.-=.+  ...|+++..++.
T Consensus       334 VFRIFKLSRHSkGLQILGqTl~aSmrElgLLIFFlfIgviLFsSavYFAEade~~S~F~SIPdaFW  399 (507)
T KOG1545|consen  334 VFRIFKLSRHSKGLQILGQTLRASMRELGLLIFFLFIGVILFSSAVYFAEADEPESHFSSIPDAFW  399 (507)
T ss_pred             HhhheeeccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhceeeeeecCCCccCCCcCcccce
Confidence            555444      2344555555566655444444444455566555543222  234766555443

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=92.88  E-value=0.17  Score=40.96  Aligned_cols=47  Identities=13%  Similarity=0.304  Sum_probs=27.7

Q ss_pred             cHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHC
Q psy817          185 TPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSL  232 (854)
Q Consensus       185 t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~  232 (854)
                      ..+..|+.+|+.|+++.+++.+ .+...++..|+...+-++++||+++
T Consensus         8 ~tl~~Ai~GGN~eII~~c~~~~-~~~~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    8 KTLEYAIIGGNFEIINICLKKN-KPDNDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHh-ccHHHHHHHHHHHhhHHHHHHHHHh
Confidence            3456666666666666666544 2234556666666666666666654

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=90.30  E-value=0.48  Score=38.33  Aligned_cols=47  Identities=11%  Similarity=0.170  Sum_probs=32.0

Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCCCCCCCCccHHHHHHHcCCHHHHHHHHhC
Q psy817          123 TALLWCVFVKREDLLDALHQLGADLSNDKYGALHLAAFNGSIKGCSWLMLH  173 (854)
Q Consensus       123 t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~  173 (854)
                      ..+..|+..|+.|+++.+++.+ .++   ...+..|+...+.+++++|+++
T Consensus         8 ~tl~~Ai~GGN~eII~~c~~~~-~~~---~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    8 KTLEYAIIGGNFEIINICLKKN-KPD---NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHh-ccH---HHHHHHHHHHhhHHHHHHHHHh
Confidence            4567777777777777777655 221   3457777777777777777776

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>KOG1419|consensus

Probab=89.30  E-value=1.4  Score=48.34  Aligned_cols=179  Identities=16%  Similarity=0.199  Sum_probs=89.2

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhh------hhhhhhhhhhhchhhHHHHHHHHHHHHHHHhccCcccchhhhHHHHH--H
Q psy817          560 FMETVWYVLALLATIELIRKIFGL------VEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVA--V  631 (854)
Q Consensus       560 ~~~~~~~~~~~~~~~~~~~e~~~~------~~~~~~~~y~~~~wN~~d~~~~~~~~~~~~~~~~~~~~~~~~~~a~~--~  631 (854)
                      +.-+++++.++++..+.+..+|..      ..+.|+.+|.+...-.+|+++++..+++.+.-      .+-+++|-.  -
T Consensus       126 ~L~~LEiv~IV~Fg~EfivRlWSAGC~~rYrG~~GRLrFarkp~cvIDiivi~Asi~vl~~g------~qG~vfatSalr  199 (654)
T KOG1419|consen  126 ILYILEIVMIVFFGLEFIVRLWSAGCCCRYRGWYGRLRFARKPFCVIDIIVIIASIAVLAAG------SQGNVFATSALR  199 (654)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccccccccceeeEEeecCCceEEEEeeeeeeeeEEEec------Cccceeehhhhh
Confidence            445666777777777777777753      23456677888888888986554433222111      111222211  1


Q ss_pred             HHHHHHHHHHHcccCccchHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhc--------CCCCccCChHHHHHH
Q psy817          632 LLGWSNLMGMIGQLPSVGTYVAMFSRVQL----EFLKLFQAYICLLVGFTLTFCIVF--------PSEDRFQNPIIGFIN  699 (854)
Q Consensus       632 ~l~~~~ll~~~~~~~~~G~~v~m~~~~~~----d~~~f~~i~~~~l~aF~~~f~~l~--------~~~~~f~~~~~s~~~  699 (854)
                      -+-++.++.+++..+.-|.. ..++.|+.    +++.-  .|+-|+..-..+|.+-.        ..++.|.++-.++.=
T Consensus       200 slRFlQILRmlr~DRrggTW-KLLGSvV~aH~~ELiTt--~YIGFL~LIfsSflVYLaEKd~~~e~~n~~F~TyADALWW  276 (654)
T KOG1419|consen  200 SLRFLQILRMLRMDRRGGTW-KLLGSVVYAHSKELITT--WYIGFLVLIFSSFLVYLAEKDAQGEGTNDEFPTYADALWW  276 (654)
T ss_pred             hhHHHHHHHHHHhhccCchh-hhhhhhhhhhHHHHHHH--HHHHHHHHHHHHHHHHHhhcccccccccccchhHHHHHHh
Confidence            35566666666666655554 33333332    22211  11111111112222222        124457776555432


Q ss_pred             HHHHHhcCcchhhhhccCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Q psy817          700 ILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQG  758 (854)
Q Consensus       700 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ilf~~f~~~~~ivLlNlLIA~~~~~~~~  758 (854)
                            |-+....+-+.+    .....|+|.++-.+|.++. |=..-|=-+++++-|.-
T Consensus       277 ------G~ITltTIGYGD----k~P~TWlGr~laa~fslig-iSFFALPAGILGSGfAL  324 (654)
T KOG1419|consen  277 ------GVITLTTIGYGD----KTPQTWLGRLLAACFSLIG-ISFFALPAGILGSGFAL  324 (654)
T ss_pred             ------hheeEEeeccCC----cCcccchhHHHHHHHHHHH-HHHHhcccccccchhhh
Confidence                  222222222221    2223489999999988765 33334455667776653

>KOG3533|consensus

Probab=88.20  E-value=25  Score=43.02  Aligned_cols=56  Identities=21%  Similarity=0.546  Sum_probs=38.0

Q ss_pred             HHHHH-HHHHHHHHHHHHHHHHHHHHhhHHHHHhhhh-HHHHHHHHHHHHHHHHHhhc
Q psy817          729 AHIVF-TIFMLFVTVVLMNLLVGIAVQDIQGLHKTAG-LDKLVRQTELIHSLELALFQ  784 (854)
Q Consensus       729 ~~ilf-~~f~~~~~ivLlNlLIA~~~~~~~~v~~~a~-~~~~~~~~~~i~~~e~~l~~  784 (854)
                      +.+.| ..|.+++.||.+||.-|++.+||...+.+.. .|....-.-.|-.+||.-|.
T Consensus      2541 aRV~YDllFffivIiIVLNLIFGVIIDTFaDLRsEKqkKEeILKttCFICgLeR~kFD 2598 (2706)
T KOG3533|consen 2541 ARVAYDLLFFFIVIIIVLNLIFGVIIDTFADLRSEKQKKEEILKTTCFICGLERSKFD 2598 (2706)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhhHHHHHHhcceeEeecchhhcc
Confidence            44433 4577788899999999999999999876532 33444444556666665443

>COG4272 Predicted membrane protein [Function unknown]

Probab=87.54  E-value=1.8  Score=36.39  Aligned_cols=91  Identities=18%  Similarity=0.280  Sum_probs=48.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccC--------C-----------hH---HHHHHHHHHHhcCcchhhh
Q psy817          656 SRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQ--------N-----------PI---IGFINILVMMTGELNVNEV  713 (854)
Q Consensus       656 ~~~~~d~~~f~~i~~~~l~aF~~~f~~l~~~~~~f~--------~-----------~~---~s~~~~~~~~~G~~~~~~~  713 (854)
                      .|.+...+|.-+..+.+++-|++....+-++...|.        +           .+   -.+...+++++|.+-+-  
T Consensus         5 er~Is~~LRIGV~vS~~iIIfGvillfv~nG~sGy~l~qi~sy~~~~ns~~~~~~~I~sGL~~l~gl~~i~tGL~vLi--   82 (125)
T COG4272           5 ERIISYALRIGVSVSAIIIIFGVILLFVKNGGSGYTLAQIASYPSQLNSKIIYLGEIFSGLVTLKGLAFIMTGLFVLI--   82 (125)
T ss_pred             HHHHHHHHhhhhhhhhHHHHHHHHHHheeCCCCCccchhcccCchhhcccccchhhhhhcchhhhhHHHHHHhHHHHH--
Confidence            345566667777777777777777655543332222        1           00   12233444555543221  


Q ss_pred             hccCCCCCccccchhHHHHHHH-----HHHHHHHHHHHHHHHHHHh
Q psy817          714 LLGTEAKPPVLLKGTAHIVFTI-----FMLFVTVVLMNLLVGIAVQ  754 (854)
Q Consensus       714 ~~~~~~~~~~~~~~~~~ilf~~-----f~~~~~ivLlNlLIA~~~~  754 (854)
                            -.|....+++.+-|..     |+.+..|||.||.+||.+.
T Consensus        83 ------~TPvlrVvisl~sF~~e~nkLYvaitiiVlfnL~famlv~  122 (125)
T COG4272          83 ------LTPVLRVVISLVSFAKEKNKLYVAITIIVLFNLFFAMLVG  122 (125)
T ss_pred             ------HhHHHHHHHHHHHHHHhcCeEEEehHHHHHHHHHHHHHhc
Confidence                  0122222233333332     6778899999999999863

>PLN03223 Polycystin cation channel protein; Provisional

Probab=86.65  E-value=7  Score=48.04  Aligned_cols=77  Identities=12%  Similarity=0.034  Sum_probs=40.2

Q ss_pred             HHHHHHHHHHHHHHHHHcccCcc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCChHHHHHHHHH
Q psy817          626 VGAVAVLLGWSNLMGMIGQLPSV-GTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFINILV  702 (854)
Q Consensus       626 ~~a~~~~l~~~~ll~~~~~~~~~-G~~v~m~~~~~~d~~~f~~i~~~~l~aF~~~f~~l~~~~~~f~~~~~s~~~~~~  702 (854)
                      +..+..++-++|+|.|-+....+ ..+..++..+..=++.|+++|+.+-+...+.|..-..+...|.+-..+++.+..
T Consensus      1297 IlIFLsiLKfLRLLRFNPrL~vLt~TLrrAapDLa~F~IIF~IVF~AFAqLG~LLFGt~ve~FSTf~sSL~TLFqMLL 1374 (1634)
T PLN03223       1297 INIILLLGRILKLMDFQPRLGVITRTLWLAGADLMHFFVIFGMVFVGYAFIGHVIFGNASVHFSDMTDSINSLFENLL 1374 (1634)
T ss_pred             HHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhcCHHHHHHHHHHHHH
Confidence            34455566677777776555543 456666666666555555555555322233344334444444444444444433

>KOG4390|consensus

Probab=81.52  E-value=0.73  Score=47.79  Aligned_cols=159  Identities=14%  Similarity=0.164  Sum_probs=87.8

Q ss_pred             hhhhhhhhhchhhHHHHHHHHHHHHHHHhccCcccchhhhHHHHHH--HHHHHHHHHHHcccCccchHHHHHHHHHHHHH
Q psy817          586 YASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAV--LLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFL  663 (854)
Q Consensus       586 ~~~~~~y~~~~wN~~d~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~--~l~~~~ll~~~~~~~~~G~~v~m~~~~~~d~~  663 (854)
                      ..++.++.+++-.++|.+.|+-.++.... ..    -.++-+++..  ++.-+|+..|-|-.+.+.++--.+.....++.
T Consensus       251 APsR~rF~RSvMSiIDVvAIlPYYigLv~-t~----N~DVSGaFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELG  325 (632)
T KOG4390|consen  251 APSRYRFLRSVMSIIDVVAILPYYIGLVM-TD----NEDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELG  325 (632)
T ss_pred             CchHHHHHHHHHHHHHHhhhhhhheEEEe-cC----CccccceeEEEEeeeeeeeeeecccccccchhhhhHHHHHHHHh
Confidence            35667788999999998776654432221 11    1122222211  23334555555666666666667777777777


Q ss_pred             HHHHHHHHHHHHHHH-HHHHhcCC-CCccCChHHHHHHHHHHHhcCcchhhhhccCCCCCccccchhHHHHHHHHHHHHH
Q psy817          664 KLFQAYICLLVGFTL-TFCIVFPS-EDRFQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLFVT  741 (854)
Q Consensus       664 ~f~~i~~~~l~aF~~-~f~~l~~~-~~~f~~~~~s~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ilf~~f~~~~~  741 (854)
                      ..++-+.+-++-|+. .||.==+. ...|.++..++..+++.|+ .+.|.|+...         ...|.| |+.-.-+.-
T Consensus       326 FLlFSLtMAIIIFATvMfYAEKg~~at~FTsIPaaFWYTIVTmT-TLGYGDMVp~---------TIaGKI-fGsiCSLSG  394 (632)
T KOG4390|consen  326 FLLFSLTMAIIIFATVMFYAEKGSSATKFTSIPAAFWYTIVTMT-TLGYGDMVPS---------TIAGKI-FGSICSLSG  394 (632)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhccccccccccCcHhHhhheeeee-eccccccchH---------HHHHHH-hhhhhcccc
Confidence            777666666777764 44443322 2358877777766665443 2334333211         123443 333333344


Q ss_pred             HHHHHHHHHHHHhhHHHHH
Q psy817          742 VVLMNLLVGIAVQDIQGLH  760 (854)
Q Consensus       742 ivLlNlLIA~~~~~~~~v~  760 (854)
                      ++.+-|=+-++++.|.+|.
T Consensus       395 VLVIALPVPvIVSNFSRIY  413 (632)
T KOG4390|consen  395 VLVIALPVPVIVSNFSRIY  413 (632)
T ss_pred             eEEEeccccEEEechhHHH
Confidence            4445556667888898884

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	854
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		1e-27
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		2e-11
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		2e-23
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		6e-22
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		7e-10
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		8e-22
2xee_A	157	Structural Determinants For Improved Thermal Stabil		1e-21
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		1e-21
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		2e-21
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		2e-21
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		3e-21
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		4e-21
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		6e-21
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		6e-21
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		7e-21
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		1e-20
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		2e-20
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		3e-20
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		4e-20
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		4e-20
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		1e-07
2bkk_B	169	Crystal Structure Of Aminoglycoside Phosphotransfer		7e-20
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		5e-19
2v5q_C	167	Crystal Structure Of Wild-type Plk-1 Kinase Domain		9e-19
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		1e-18
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		1e-04
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		3e-18
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		3e-10
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-17
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		3e-10
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		6e-17
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		7e-16
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		8e-17
1k1b_A	241	Crystal Structure Of The Ankyrin Repeat Domain Of B		1e-15
3zkj_A	261	Crystal Structure Of Ankyrin Repeat And Socs Box-co		2e-15
3zkj_A	261	Crystal Structure Of Ankyrin Repeat And Socs Box-co		2e-09
3zkj_A	261	Crystal Structure Of Ankyrin Repeat And Socs Box-co		2e-04
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		4e-15
3d9h_A	285	Crystal Structure Of The Splice Variant Of Human As		7e-15
3d9h_A	285	Crystal Structure Of The Splice Variant Of Human As		4e-09
3d9h_A	285	Crystal Structure Of The Splice Variant Of Human As		6e-04
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		2e-14
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		3e-14
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		3e-13
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		4e-14
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		4e-12
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		4e-14
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		7e-13
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		1e-13
3twu_A	167	Crystal Structure Of Arc4 From Human Tankyrase 2 In		1e-13
3twr_A	165	Crystal Structure Of Arc4 From Human Tankyrase 2 In		1e-13
3twq_A	175	Crystal Structure Of Arc4 From Human Tankyrase 2 (A		1e-13
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		1e-13
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		3e-13
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		1e-13
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		2e-13
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		1e-11
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		4e-13
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		2e-11
1awc_B	153	Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 1		2e-12
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		3e-12
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		7e-07
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		5e-05
3hg0_D	136	Crystal Structure Of A Darpin In Complex With Orf49		4e-12
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		5e-12
1uoh_A	226	Human Gankyrin Length = 226		9e-12
1uoh_A	226	Human Gankyrin Length = 226		2e-11
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		9e-12
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		2e-11
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		9e-04
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		2e-11
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		2e-11
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		2e-11
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		3e-11
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		5e-11
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		8e-09
2dzn_A	228	Crystal Structure Analysis Of Yeast Nas6p Complexed		7e-11
1ixv_A	231	Crystal Structure Analysis Of Homolog Of Oncoprotei		8e-11
1wg0_A	243	Structural Comparison Of Nas6p Protein Structures I		9e-11
4b93_B	269	Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyri		1e-10
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		2e-10
1wdy_A	285	Crystal Structure Of Ribonuclease Length = 285		1e-09
4g8k_A	337	Intact Sensor Domain Of Human Rnase L In The Inacti		2e-09
1ot8_A	239	Structure Of The Ankyrin Domain Of The Drosophila N		5e-09
1ot8_A	239	Structure Of The Ankyrin Domain Of The Drosophila N		2e-08
2rfm_A	192	Structure Of A Thermophilic Ankyrin Repeat Protein		5e-09
1nfi_E	213	I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213		8e-09
1nfi_E	213	I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213		2e-04
1ikn_D	236	IkappabalphaNF-Kappab Complex Length = 236		3e-08
2qc9_A	210	Mouse Notch 1 Ankyrin Repeat Intracellular Domain L		5e-08
2qc9_A	210	Mouse Notch 1 Ankyrin Repeat Intracellular Domain L		4e-05
3v30_A	172	Crystal Structure Of The Peptide Bound Complex Of T		9e-08
3uxg_A	172	Crystal Structure Of Rfxank Length = 172		2e-07
2he0_A	253	Crystal Structure Of A Human Notch1 Ankyrin Domain		2e-07
2he0_A	253	Crystal Structure Of A Human Notch1 Ankyrin Domain		7e-06
2he0_A	253	Crystal Structure Of A Human Notch1 Ankyrin Domain		1e-04
2f8x_K	256	Crystal Structure Of Activated Notch, Csl And Maml		3e-07
2f8x_K	256	Crystal Structure Of Activated Notch, Csl And Maml		1e-05
1yyh_A	253	Crystal Structure Of The Human Notch 1 Ankyrin Doma		3e-07
1yyh_A	253	Crystal Structure Of The Human Notch 1 Ankyrin Doma		1e-05
2f8y_A	223	Crystal Structure Of Human Notch1 Ankyrin Repeats T		3e-07
2f8y_A	223	Crystal Structure Of Human Notch1 Ankyrin Repeats T		1e-05
3eu9_A	240	The Ankyrin Repeat Domain Of Huntingtin Interacting		1e-06
3v2o_A	183	Crystal Structure Of The Peptide Bound Complex Of T		2e-06
3v2o_A	183	Crystal Structure Of The Peptide Bound Complex Of T		8e-04
3so8_A	162	Crystal Structure Of Ankra Length = 162		2e-06
3so8_A	162	Crystal Structure Of Ankra Length = 162		9e-04
3v2x_A	167	Crystal Structure Of The Peptide Bound Complex Of T		2e-06
3f6q_A	179	Crystal Structure Of Integrin-Linked Kinase Ankyrin		3e-06
2kbx_A	171	Solution Structure Of Ilk-Pinch Complex Length = 17		3e-06
2xen_A	91	Structural Determinants For Improved Thermal Stabil		6e-06
1mx6_A	168	Structure Of P18ink4c (F92n) Length = 168		4e-05
1ap7_A	168	P19-Ink4d From Mouse, Nmr, 20 Structures Length = 1		6e-05
1blx_B	166	P19ink4dCDK6 COMPLEX Length = 166		7e-05
1myo_A	118	Solution Structure Of Myotrophin, Nmr, 44 Structure		9e-05
1ihb_A	162	Crystal Structure Of P18-Ink4c(Ink6) Length = 162		1e-04
1bu9_A	168	Solution Structure Of P18-Ink4c, 21 Structures Leng		1e-04
1oy3_D	282	Crystal Structure Of An IkbbetaNF-Kb P65 Homodimer		1e-04
1k3z_D	282	X-Ray Crystal Structure Of The IkbbNF-Kb P65 Homodi		1e-04
1mx2_A	168	Structure Of F71n Mutant Of P18ink4c Length = 168		2e-04
1mx4_A	168	Structure Of P18ink4c (F82q) Length = 168		2e-04
2zgg_A	92	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		2e-04
3aaa_C	123	Crystal Structure Of Actin Capping Protein In Compl		2e-04
1bd8_A	156	Structure Of Cdk Inhibitor P19ink4d Length = 156		3e-04
1bd8_A	156	Structure Of Cdk Inhibitor P19ink4d Length = 156		4e-04
1bi8_B	166	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		3e-04
1bi8_B	166	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		4e-04
3t9k_A	390	Crystal Structure Of Acap1 C-portion Mutant S554d F		5e-04
4f1p_A	368	Crystal Structure Of Mutant S554d For Arfgap And An		6e-04
3jue_A	368	Crystal Structure Of Arfgap And Ank Repeat Domain O		7e-04
1ymp_A	135	The Crystal Structure Of A Partial Mouse Notch-1 An		9e-04

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score =  122 bits (305), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/287 (33%), Positives = 146/287 (50%), Gaps = 15/287 (5%)
Query: 155 LHLAAFNGSIKGC-SWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE-- 211
           LH+AA  G ++   + L         TK  +TPLH A     V  A+ L++  AH +   
Sbjct: 117 LHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAG 176
Query: 212 ----TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILD-SG 266
               T +H AV  N +D V+LLL    +P+     G +PLHIAA +  +   +++L   G
Sbjct: 177 KNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGG 236
Query: 267 MADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVEC 326
            A+ +     + VT LHLAA+ G+ E + +LL   AN N  N     PLHL A+   V  
Sbjct: 237 SANAE---SVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPV 293
Query: 327 MEMLLRKGSQVNASDCDNRTPLH-ASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHI 385
            ++L++ G  V+A+     TPLH AS   NI  V   + LL+  A+VNA+   GYSP+H 
Sbjct: 294 ADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLV---KFLLQHQADVNAKTKLGYSPLHQ 350
Query: 386 AALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRK 432
           AA    +  V  L+ +GA  +  +  G++ L+I  R    S++ V K
Sbjct: 351 AAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLK 397

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
Query: 279 VTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVN 338
           +T LH+A+  G++  ++ LL+  A+ N  N K + PLH+AA+    E  + LL+  ++VN
Sbjct: 15  LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN 74
Query: 339 ASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCL 398
           A   D++TPLH   +  I   + +++LL+  AN N     G++P+HIAA     + V  L
Sbjct: 75  AKAKDDQTPLHC--AARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLAL 132
Query: 399 IMHGADISSKTPSGSSALSIIMR 421
           +   A  +  T  G + L +  +
Sbjct: 133 LEKEASQACMTKKGFTPLHVAAK 155

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score =  107 bits (267), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 57/151 (37%), Positives = 92/151 (60%), Gaps = 2/151 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA  G  + +RIL+ N A+ N  + +   PLHLAA     E +E+LL+ G+ VNA D D 
Sbjct: 21  AARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDG 80
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
            TPLH +     L +  +E+LLK+GA+VNA+D +G +P+H+AA     + V+ L+ HGAD
Sbjct: 81  WTPLHLAADNGHLEI--VEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGAD 138
Query: 405 ISSKTPSGSSALSIIMRNTPSSISSVRKKLD 435
           ++++   G +A  I + N    ++ + +KL+
Sbjct: 139 VNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score =  103 bits (256), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 54/134 (40%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA  G  + +RIL+ N A+ N  +H  + PLH+AA    +E +E+LLR G+ VNA D + 
Sbjct: 9   AARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNG 68
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
            TPLH + S   L +  +E+LLK+GA+VNA+D  G +P+++AA     + V+ L+ HGAD
Sbjct: 69  TTPLHLAASLGHLEI--VEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGAD 126
Query: 405 ISSKTPSGSSALSI 418
           ++++   G +A  I
Sbjct: 127 VNAQDKFGKTAFDI 140

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 63.2 bits (152), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 3/138 (2%)
Query: 318 AAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDI 377
           AA+    + + +L+  G+  NA D   RTPLH + +   L +  +E+LL+ GA+VNA D 
Sbjct: 9   AARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEI--VEVLLRNGADVNAVDT 66
Query: 378 FGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSS 437
            G +P+H+AA     + V+ L+ +GAD+++K  +G + L +        I  V  K  + 
Sbjct: 67  NGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGAD 126
Query: 438 ISLQDPEASTK-DIELKL 454
           ++ QD    T  DI + +
Sbjct: 127 VNAQDKFGKTAFDISIDI 144

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score =  102 bits (254), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 56/149 (37%), Positives = 90/149 (60%), Gaps = 2/149 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA  G  + +RIL+ N A+ N ++     PLHLAA+   +E +E+LL+ G+ VNA D D 
Sbjct: 9   AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
            TPLH +  +  L +  +E+LLK GA+VNA+D  GY+P+H+AA     + V+ L+  GAD
Sbjct: 69  YTPLHLAAREGHLEI--VEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD 126
Query: 405 ISSKTPSGSSALSIIMRNTPSSISSVRKK 433
           ++++   G +   + +R     I+ V +K
Sbjct: 127 VNAQDKFGKTPFDLAIREGHEDIAEVLQK 155

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score =  102 bits (253), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 56/149 (37%), Positives = 90/149 (60%), Gaps = 2/149 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA  G  + +RIL+ N A+ N ++     PLHLAA+   +E +E+LL+ G+ VNA D D 
Sbjct: 9   AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
            TPLH +  +  L +  +E+LLK GA+VNA+D  GY+P+H+AA     + V+ L+  GAD
Sbjct: 69  YTPLHLAAREGHLEI--VEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD 126
Query: 405 ISSKTPSGSSALSIIMRNTPSSISSVRKK 433
           ++++   G +   + + N    I+ V +K
Sbjct: 127 VNAQDKFGKTPFDLAIDNGNEDIAEVLQK 155

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score =  102 bits (253), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 58/151 (38%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA  G  + +RIL+ N A+ N  +H    PLHLAA    +E +E+LL+ G+ VNA D   
Sbjct: 21  AARAGQDDEVRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLG 80
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
            TPLH +  +  L V  +E+LLK GA+VNA D  G++P+H+AA     + V+ L+ HGAD
Sbjct: 81  VTPLHLAADRGHLEV--VEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGAD 138
Query: 405 ISSKTPSGSSALSIIMRNTPSSISSVRKKLD 435
           ++++   G +A  I + N    ++ + +KL+
Sbjct: 139 VNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score =  101 bits (252), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 55/146 (37%), Positives = 89/146 (60%), Gaps = 2/146 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA  G  + +RIL+ N A+ N ++     PLHLAA+   +E +E+LL+ G+ VNA D D 
Sbjct: 21  AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
            TPLH +  +  L +  +E+LLK GA+VNA+D  GY+P+H+AA     + V+ L+  GAD
Sbjct: 81  YTPLHLAAREGHLEI--VEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD 138
Query: 405 ISSKTPSGSSALSIIMRNTPSSISSV 430
           ++++   G +A  I + N    ++ +
Sbjct: 139 VNAQDKFGKTAFDISIDNGNEDLAEI 164

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score =  101 bits (251), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 56/151 (37%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA  G  + +RIL+ N A+ N  +     PLHLAAK   +E +E+LL+ G+ VNA D   
Sbjct: 21  AARAGQDDEVRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYG 80
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
            TPLH +     L +  +E+LLK GA+VNA+D  G++P+H+AA     + V+ L+ +GAD
Sbjct: 81  ATPLHLAADNGHLEI--VEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGAD 138
Query: 405 ISSKTPSGSSALSIIMRNTPSSISSVRKKLD 435
           ++++   G +A  I + N    ++ + +KL+
Sbjct: 139 VNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score =  100 bits (250), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 56/151 (37%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA  G  + +RIL+ N A+ N R+     PLHLAA    +E +E+LL+ G+ VNA D   
Sbjct: 21  AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
            TPLH +  +  L +  +E+LLK GA+VNA D  G++P+H+AA     + V+ L+ +GAD
Sbjct: 81  VTPLHLAARRGHLEI--VEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGAD 138
Query: 405 ISSKTPSGSSALSIIMRNTPSSISSVRKKLD 435
           ++++   G +A  I + N    ++ + +KL+
Sbjct: 139 VNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score =  100 bits (248), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 53/146 (36%), Positives = 88/146 (60%), Gaps = 2/146 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA  G  + +RIL+ N A+ N  +     PLHLAA+   +E +E+LL+ G+ VNA D   
Sbjct: 21  AARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSG 80
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
            TPLH +  +  L +  +E+LLK+GA+VNA D  G +P+H+AA +   + V+ L+ +GAD
Sbjct: 81  STPLHLAAKRGHLEI--VEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGAD 138
Query: 405 ISSKTPSGSSALSIIMRNTPSSISSV 430
           ++++   G +A  I + N    ++ +
Sbjct: 139 VNAQDKFGKTAFDISIDNGNEDLAEI 164

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score = 99.8 bits (247), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 55/151 (36%), Positives = 93/151 (61%), Gaps = 2/151 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA  G  + +RIL+ N A+ N  +   + PLHLAA    +E +E+LL+ G+ VNA+D   
Sbjct: 21  AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
            TPLH +     L +  +E+LLK GA+VNA D +G++P+H+AA +   + V+ L+ +GAD
Sbjct: 81  DTPLHLAALYGHLEI--VEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGAD 138
Query: 405 ISSKTPSGSSALSIIMRNTPSSISSVRKKLD 435
           ++++   G +A  I + N    ++ + +KL+
Sbjct: 139 VNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 99.8 bits (247), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 57/151 (37%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA  G  + +RIL+ N A+ N  +     PLHLAA    +E +E+LL+ G+ VNA D   
Sbjct: 21  AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
            TPLH  L+  I  +  +E+LLK GA+VNA D +G +P+H+AA+    + V+ L+ HGAD
Sbjct: 81  STPLH--LAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGAD 138
Query: 405 ISSKTPSGSSALSIIMRNTPSSISSVRKKLD 435
           ++++   G +A  I + N    ++ + +KL+
Sbjct: 139 VNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 99.4 bits (246), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 56/146 (38%), Positives = 87/146 (59%), Gaps = 2/146 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA  G  + +RIL+ N A+ N  +     PLHLAA    +E +E+LL+ G+ VNASD   
Sbjct: 13  AAAAGQDDEVRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAG 72
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
            TPLH +     L +  +E+LLK GA+VNA D  G++P+H+AALS   + V+ L+ HGAD
Sbjct: 73  ITPLHLAAYDGHLEI--VEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGAD 130
Query: 405 ISSKTPSGSSALSIIMRNTPSSISSV 430
           ++++   G +A  I +      ++ +
Sbjct: 131 VNAQDALGLTAFDISINQGQEDLAEI 156

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 98.6 bits (244), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 57/151 (37%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA  G  + +RIL+ N A+ N  +     PLHLAA    +E +E+LL+ G+ VNA D   
Sbjct: 21  AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
            TPLH  L+  I  +  +E+LLK GA+VNA D +G +P+H+AA+    + V+ L+ HGAD
Sbjct: 81  STPLH--LAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGAD 138
Query: 405 ISSKTPSGSSALSIIMRNTPSSISSVRKKLD 435
           ++++   G +A  I + N    ++ + +KL+
Sbjct: 139 VNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 98.2 bits (243), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 55/146 (37%), Positives = 88/146 (60%), Gaps = 2/146 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA  G  + +RIL+ N A+ N  ++    PLHLAA    +E +E+LL+ G+ VNASD   
Sbjct: 21  AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
            TPLH + +   L +  +E+LLK GA+VNA D  G++P+H+AA     + V+ L+ HGAD
Sbjct: 81  ITPLHLAAATGHLEI--VEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGAD 138
Query: 405 ISSKTPSGSSALSIIMRNTPSSISSV 430
           ++++   G +A  I + N    ++ +
Sbjct: 139 VNAQDKFGKTAFDISIDNGNEDLAEI 164

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score = 97.4 bits (241), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 56/151 (37%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA  G  + +RIL+ N A+ N  ++    PLHLAA    +E +E+LL+ G+ V+ASD   
Sbjct: 21  AARAGQDDEVRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFG 80
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
            TPLH +     L +  +E+LLK GA+VNA D  G +P+H+AA     + V+ L+ HGAD
Sbjct: 81  YTPLHLAAYWGHLEI--VEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGAD 138
Query: 405 ISSKTPSGSSALSIIMRNTPSSISSVRKKLD 435
           ++++   G +A  I + N    ++ + +KL+
Sbjct: 139 VNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 97.1 bits (240), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 55/128 (42%), Positives = 84/128 (65%), Gaps = 4/128 (3%)
Query: 243 GVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHA 302
           G +PLH+AA  G +  +K +L++G ADV+ K K  R T LHLAA NG++E +++LLE  A
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGR-TPLHLAARNGHLEVVKLLLEAGA 59
Query: 303 NCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPL 362
           + N ++   + PLHLAA+   +E +++LL  G+ VNA D + RTPLH +     L V  +
Sbjct: 60  DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEV--V 117
Query: 363 EILLKWGA 370
           ++LL+ GA
Sbjct: 118 KLLLEAGA 125

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 97.1 bits (240), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 52/124 (41%), Positives = 81/124 (65%), Gaps = 2/124 (1%)
Query: 280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNA 339
           T LHLAA NG++E +++LLE  A+ N ++   + PLHLAA+   +E +++LL  G+ VNA
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63
Query: 340 SDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLI 399
            D + RTPLH +     L V  +++LL+ GA+VNA+D  G +P+H+AA +   + V  L+
Sbjct: 64  KDKNGRTPLHLAARNGHLEV--VKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121
Query: 400 MHGA 403
             GA
Sbjct: 122 EAGA 125

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 343 DNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHG 402
           + RTPLH +     L V  +++LL+ GA+VNA+D  G +P+H+AA +   + V  L+  G
Sbjct: 1   NGRTPLHLAARNGHLEV--VKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 58
Query: 403 ADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQDPEAST 447
           AD+++K  +G + L +  RN    +  +  +  + ++ +D    T
Sbjct: 59  ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRT 103

>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169

Iteration: 1
 Score = 96.3 bits (238), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 54/151 (35%), Positives = 89/151 (58%), Gaps = 2/151 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA  G  + +RIL+ N A+ N  +     PLHL      +E +E+LL+  + VNASD   
Sbjct: 21  AARAGQDDEVRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSG 80
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
            TPLH +  +  L +  +E+LLK+GA+VNA D  GY+P+H+AA     + V+ L+ +GAD
Sbjct: 81  WTPLHLAAYRGHLEI--VEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGAD 138
Query: 405 ISSKTPSGSSALSIIMRNTPSSISSVRKKLD 435
           ++++   G +A  I + N    ++ + +KL+
Sbjct: 139 VNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 93.2 bits (230), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 55/151 (36%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA  G  + +RIL+ N A+ N  +     PLHLAA    +E +E+LL+ G+ VNA D   
Sbjct: 21  AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
            TPLH  L+ +   +  +E+LLK GA+VNA+D  G +P+H+AA     + V+ L+ +GAD
Sbjct: 81  STPLH--LAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGAD 138
Query: 405 ISSKTPSGSSALSIIMRNTPSSISSVRKKLD 435
           ++++   G +A  I + N    ++ + +KL+
Sbjct: 139 VNAQDKFGKTAFDISINNGNEDLAEILQKLN 169

>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167

Iteration: 1
 Score = 92.4 bits (228), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 52/138 (37%), Positives = 85/138 (61%), Gaps = 2/138 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA  G  + +RIL+ N A+ N  ++    PLHLAA    +E +E+LL+ G+ V+A+D   
Sbjct: 21  AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
            TPLH +     L +  +E+LLK+GA+VNA D+ G +P+H+AA     + V+ L+ +GAD
Sbjct: 81  FTPLHLAAMTGHLEI--VEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGAD 138
Query: 405 ISSKTPSGSSALSIIMRN 422
           ++++   G +A  I + N
Sbjct: 139 VNAQDKFGKTAFDISIDN 156

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 54/151 (35%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA  G  + +RIL+ N A+ N  +     PLHLAA    +E +E+LL+ G+ VNA D   
Sbjct: 21  AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
            TPL  +     L +  +E+LLK GA+VNA D+ G++P+H+AA+    + V+ L+ +GAD
Sbjct: 81  MTPLRLAALFGHLEI--VEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD 138
Query: 405 ISSKTPSGSSALSIIMRNTPSSISSVRKKLD 435
           ++++   G +A  I + N    ++ + +KL+
Sbjct: 139 VNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Query: 362 LEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMR 421
           + IL+  GA+VNA D  G++P+H+AA +   + V+ L+ +GAD+++   +G + L +   
Sbjct: 30  VRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAAL 89
Query: 422 NTPSSISSVRKKLDSSISLQDPEASTKDIELKLNFKY------ILQNGPD 465
                I  V  K  + ++  D E  T  + L   F +      +L+NG D
Sbjct: 90  FGHLEIVEVLLKNGADVNANDMEGHTP-LHLAAMFGHLEIVEVLLKNGAD 138

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 2/134 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AAENG  + ++ L+EN A+ N  +   + PLH AAK    E +++L+ KG+ VNA D D 
Sbjct: 11  AAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDG 70
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
           RTPLH +  +    +  +++L+  GA+VNA+D  G +P+H AA     + V  LI  GAD
Sbjct: 71  RTPLHYAAKEGHKEI--VKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGAD 128
Query: 405 ISSKTPSGSSALSI 418
           +++    G + L +
Sbjct: 129 VNTSDSDGRTPLDL 142

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Query: 330 LLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALS 389
           L+  G+ VNASD D RTPLH +  +    +  +++L+  GA+VNA+D  G +P+H AA  
Sbjct: 23  LIENGADVNASDSDGRTPLHYAAKEGHKEI--VKLLISKGADVNAKDSDGRTPLHYAAKE 80
Query: 390 ELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQDPEAST 447
              + V  LI  GAD+++K   G + L    +     I  +     + ++  D +  T
Sbjct: 81  GHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADVNTSDSDGRT 138

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 2/134 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AAENG  + ++ L+EN A+ N  +   + PLH AA+    E +++L+ KG+ VNA D D 
Sbjct: 11  AAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDG 70
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
           RTPLH +       V  +++L+  GA+VNA+D  G +P+H AA +   + V  LI  GAD
Sbjct: 71  RTPLHHAAENGHKEV--VKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD 128
Query: 405 ISSKTPSGSSALSI 418
           +++    G + L +
Sbjct: 129 VNTSDSDGRTPLDL 142

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Query: 330 LLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALS 389
           L+  G+ VNASD D RTPLH +       V  +++L+  GA+VNA+D  G +P+H AA +
Sbjct: 23  LIENGADVNASDSDGRTPLHHAAENGHKEV--VKLLISKGADVNAKDSDGRTPLHHAAEN 80
Query: 390 ELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQDPEAST 447
              + V  LI  GAD+++K   G + L     N    +  +     + ++  D +  T
Sbjct: 81  GHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRT 138

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 86.7 bits (213), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 51/125 (40%), Positives = 74/125 (59%), Gaps = 2/125 (1%)
Query: 224 DCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALH 283
           D V+ LL    +PN  ++ G +PLH AA+ G    +K +L  G AD + K  + R T LH
Sbjct: 18  DRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKG-ADPNAKDSDGR-TPLH 75
Query: 284 LAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCD 343
            AAENG+ E +++LL   A+ N ++   + PLH AA+    E +++LL KG+  N SD D
Sbjct: 76  YAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNTSDSD 135
Query: 344 NRTPL 348
            RTPL
Sbjct: 136 GRTPL 140

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 82.8 bits (203), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 49/134 (36%), Positives = 76/134 (56%), Gaps = 2/134 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AAENG  + ++ LLEN A+ N  +   + PLH AA+    E +++LL KG+  NA D D 
Sbjct: 11  AAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDG 70
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
           RTPLH +       +  +++LL  GA+ NA+D  G +P+H AA +   + V  L+  GAD
Sbjct: 71  RTPLHYAAENGHKEI--VKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGAD 128
Query: 405 ISSKTPSGSSALSI 418
            ++    G + L +
Sbjct: 129 PNTSDSDGRTPLDL 142

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 85.9 bits (211), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 49/134 (36%), Positives = 78/134 (58%), Gaps = 2/134 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AAENG  + ++ LLEN A+ N  +   + PLHLAA+    E +++LL +G+  NA D D 
Sbjct: 11  AAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDG 70
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
           +TPLH +       V  +++LL  GA+ NA+D  G +P+H+AA +   + V  L+  GAD
Sbjct: 71  KTPLHLAAENGHKEV--VKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGAD 128
Query: 405 ISSKTPSGSSALSI 418
            ++    G + L +
Sbjct: 129 PNTSDSDGRTPLDL 142

>pdb|1K1B|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A Unique Member Of The Ikappab Protein Family Length = 241

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 69/234 (29%), Positives = 120/234 (51%), Gaps = 22/234 (9%)
Query: 211 ETIVHSAVSTNAVDCVQLLLSL----QINPNVLNNKGVSPLHIAADRGLISCLKAILDSG 266
           +T +H AV    +  V  L++L        ++ NN   +PLH+A    L S ++ ++ +G
Sbjct: 10  DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAG 69
Query: 267 MADVDIKTKERRVTALHLAAENGYVECLRILLENHA----NCNERNHKEQIPLHLAAKCQ 322
            + + +    +  TA HLA E+    CLR LL++ A    +   RN+     LH+A   +
Sbjct: 70  ASPMALDRHGQ--TAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE 127
Query: 323 SVECMEMLLRKGSQVNASDCDN-RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYS 381
             E +++LL +G+ ++A D  + R+PL  ++  N LS+  +++LL+ GANVNA+   G S
Sbjct: 128 CQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSM--VQLLLQHGANVNAQMYSGSS 185
Query: 382 PIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLD 435
            +H A+   L   V  L+  GAD         S+L     +TP  ++  R+ +D
Sbjct: 186 ALHSASGRGLLPLVRTLVRSGAD---------SSLKNCHNDTPLMVARSRRVID 230

>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs Box-containing Protein 9 (asb9) In Complex With Elonginb And Elonginc Length = 261

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 106/208 (50%), Gaps = 19/208 (9%)
Query: 152 YGALHLAAFNGSIKGCSWLMLHGHDINF-TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIH 210
           +  +H AA +G       L+  G  +N  T D  +PLH A LG ++ C K L+K+ A ++
Sbjct: 4   WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN 63
Query: 211 ------ETIVHSAVSTNAVDCVQLLL----SLQINPNVLNNKGVSPLHIAADRGLISCLK 260
                  T + +A  + + DCV LLL    S+Q   ++      SP+H AA RG + C+ 
Sbjct: 64  GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDL-----ASPIHEAARRGHVECVN 118
Query: 261 AILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAK 320
           +++  G  ++D K      T L+LA EN    C++ LLE+ A+ N+   ++  PLH  A+
Sbjct: 119 SLIAYG-GNIDHKISHLG-TPLYLACENQQRACVKKLLESGADVNQGKGQDS-PLHAVAR 175
Query: 321 CQSVECMEMLLRKGSQVNASDCDNRTPL 348
             S E   +L+  G+   A + + + P+
Sbjct: 176 TASEELACLLMDFGADTQAKNAEGKRPV 203

>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs Box-containing Protein 9 (asb9) In Complex With Elonginb And Elonginc Length = 261

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
Query: 245 SPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANC 304
           SP+H AA  G    L+ ++  G A V+I T +  V+ LH A   G++ C++ILL++ A  
Sbjct: 5   SPMHEAAIHGHQLSLRNLISQGWA-VNIITADH-VSPLHEACLGGHLSCVKILLKHGAQV 62
Query: 305 NERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEI 364
           N        PL  A    S +C+ +LL+ G+ V   + D  +P+H +  +    V  +  
Sbjct: 63  NGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ-PESDLASPIHEAARRG--HVECVNS 119
Query: 365 LLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTP 424
           L+ +G N++ +     +P+++A  ++   CV  L+  GAD+ ++     S L  + R   
Sbjct: 120 LIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADV-NQGKGQDSPLHAVARTAS 178
Query: 425 SSISSVRKKLDSSISLQDPEASTKDIEL 452
             ++ +     +    ++ E   + +EL
Sbjct: 179 EELACLLMDFGADTQAKNAEGK-RPVEL 205

>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs Box-containing Protein 9 (asb9) In Complex With Elonginb And Elonginc Length = 261

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 13/174 (7%)
Query: 314 PLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVN 373
           P+H AA       +  L+ +G  VN    D+ +PLH +     LS   ++ILLK GA VN
Sbjct: 6   PMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSC--VKILLKHGAQVN 63
Query: 374 ARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSV--- 430
                 ++P+  A +S    CV+ L+ HGA +  ++   S       R     ++S+   
Sbjct: 64  GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAY 123
Query: 431 RKKLDSSIS-LQDPEASTKDIELKLNFKYILQNGPDGEIGMLKIFQNDGQKEIL 483
              +D  IS L  P     + + +   K +L++G D       + Q  GQ   L
Sbjct: 124 GGNIDHKISHLGTPLYLACENQQRACVKKLLESGAD-------VNQGKGQDSPL 170

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 80.5 bits (197), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 42/118 (35%), Positives = 73/118 (61%), Gaps = 2/118 (1%)
Query: 318 AAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDI 377
           AA+    + + +L+  G+ VNA D D  TPLH  L+  +  +  +E+LLK+GA+VNA D 
Sbjct: 21  AARAGQDDEVRILMANGADVNALDEDGLTPLH--LAAQLGHLEIVEVLLKYGADVNAEDN 78
Query: 378 FGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLD 435
           FG +P+H+AA+    + V+ L+ HGAD++++   G +A  I + N    ++ + +KL+
Sbjct: 79  FGITPLHLAAIRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 136

>pdb|3D9H|A Chain A, Crystal Structure Of The Splice Variant Of Human Asb9 (Hasb9-2), An Ankyrin Repeat Protein Length = 285

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 19/208 (9%)
Query: 152 YGALHLAAFNGSIKGCSWLMLHGHDINF-TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIH 210
           +  +H AA +G       L+  G  +N  T D  +PLH A LG ++ C K L+K+ A ++
Sbjct: 60  WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN 119
Query: 211 ------ETIVHSAVSTNAVDCVQLLL----SLQINPNVLNNKGVSPLHIAADRGLISCLK 260
                  T + +A  + + DCV LLL    S+Q   ++      SP+H AA RG + C+ 
Sbjct: 120 GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDL-----ASPIHEAARRGHVECVN 174
Query: 261 AILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAK 320
           +++  G  ++D K      T L+LA EN    C++ LLE+ A+ N+   ++  PLH   +
Sbjct: 175 SLIAYG-GNIDHKISHLG-TPLYLACENQQRACVKKLLESGADVNQGKGQDS-PLHAVVR 231
Query: 321 CQSVECMEMLLRKGSQVNASDCDNRTPL 348
             S E   +L+  G+   A + + + P+
Sbjct: 232 TASEELACLLMDFGADTQAKNAEGKRPV 259

>pdb|3D9H|A Chain A, Crystal Structure Of The Splice Variant Of Human Asb9 (Hasb9-2), An Ankyrin Repeat Protein Length = 285

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 95/189 (50%), Gaps = 8/189 (4%)
Query: 237 NVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRI 296
           N++    VSPLH A   G +SC+K +L  G A V+  T +   T L  A  +G  +C+ +
Sbjct: 86  NIITADHVSPLHEACLGGHLSCVKILLKHG-AQVNGVTADWH-TPLFNACVSGSWDCVNL 143
Query: 297 LLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNI 356
           LL++ A+    +     P+H AA+   VEC+  L+  G  ++       TPL+ +     
Sbjct: 144 LLQHGASVQPESDLAS-PIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQ 202
Query: 357 LSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMH-GADISSKTPSGSSA 415
            +   ++ LL+ GA+VN +     SP+H A +   S+ + CL+M  GAD  +K   G   
Sbjct: 203 RAC--VKKLLESGADVN-QGKGQDSPLH-AVVRTASEELACLLMDFGADTQAKNAEGKRP 258
Query: 416 LSIIMRNTP 424
           + ++   +P
Sbjct: 259 VELVPPESP 267

>pdb|3D9H|A Chain A, Crystal Structure Of The Splice Variant Of Human Asb9 (Hasb9-2), An Ankyrin Repeat Protein Length = 285

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 314 PLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVN 373
           P+H AA       +  L+ +G  VN    D+ +PLH +     LS   ++ILLK GA VN
Sbjct: 62  PMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSC--VKILLKHGAQVN 119
Query: 374 ARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKT 409
                 ++P+  A +S    CV+ L+ HGA +  ++
Sbjct: 120 GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES 155

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 111/230 (48%), Gaps = 10/230 (4%)
Query: 214 VHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIK 273
           +H+A     VD   +L+    N +  +    +PL  AA+   +  +K ++ +G A VD K
Sbjct: 15  LHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAG-ALVDPK 73
Query: 274 TKERRVTALHLAAENGYVECLRILLEN-HANCNERNHKEQIPLHLAAKCQSVECMEMLLR 332
             E   T LHLAA+ G+ E ++ LL N   + N ++     P+  A + + V+ +++LL 
Sbjct: 74  DAEGS-TCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLS 132
Query: 333 KGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELS 392
           KGS +N  D +    LH +     + +   EILL    +++A +I G SP+HIAA     
Sbjct: 133 KGSDINIRDNEENICLHWAAFSGCVDI--AEILLAAKCDLHAVNIHGDSPLHIAARENRY 190
Query: 393 QCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQD 442
            CV   +   +D++ K   G + L     N     S V   L  S +LQD
Sbjct: 191 DCVVLFLSRDSDVTLKNKEGETPLQCASLN-----SQVWSALQMSKALQD 235

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/102 (43%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA  G  + +RIL+ N A+ N  + K   PLHLAA    +E +E+LL+ G+ VNA D D 
Sbjct: 21  AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIA 386
            TPLH +     L +  +E+LLK GA+VNA+D FG +   I+
Sbjct: 81  STPLHLAALFGHLEI--VEVLLKHGADVNAQDKFGKTAFDIS 120

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/118 (34%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 318 AAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDI 377
           AA+    + + +L+  G+ VNA+D    TPLH +   + L +  +E+LLK GA+VNA D 
Sbjct: 21  AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEI--VEVLLKHGADVNAHDN 78
Query: 378 FGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLD 435
            G +P+H+AAL    + V+ L+ HGAD++++   G +A  I + N    ++ + +KL+
Sbjct: 79  DGSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 136

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/102 (42%), Positives = 64/102 (62%), Gaps = 2/102 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           A   G  + +RIL+ N A+ N  +     PLHLAAK   +E +E+LL+ G+ VNASD   
Sbjct: 21  ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIA 386
           RTPLH  L+  +  +  +E+LL++GA+VNA+D FG +   I+
Sbjct: 81  RTPLH--LAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDIS 120

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/109 (33%), Positives = 66/109 (60%), Gaps = 2/109 (1%)
Query: 327 MEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIA 386
           + +L+  G+ VNA D    TPLH +  +  L +  +E+LLK GA+VNA D +G +P+H+A
Sbjct: 30  VRILMANGADVNAMDDAGVTPLHLAAKRGHLEI--VEVLLKHGADVNASDSWGRTPLHLA 87
Query: 387 ALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLD 435
           A     + V+ L+ +GAD++++   G +A  I + N    ++ + +KL+
Sbjct: 88  ATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 136

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/102 (42%), Positives = 64/102 (62%), Gaps = 2/102 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           A   G  + +RIL+ N A+ N  +     PLHLAAK   +E +E+LL+ G+ VNASD   
Sbjct: 21  ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIA 386
           RTPLH  L+  +  +  +E+LL++GA+VNA+D FG +   I+
Sbjct: 81  RTPLH--LAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDIS 120

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 38/109 (34%), Positives = 67/109 (61%), Gaps = 2/109 (1%)
Query: 327 MEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIA 386
           + +L+  G+ VNA D    TPLH +  +  L +  +E+LLK GA+VNA DI+G +P+H+A
Sbjct: 30  VRILMANGADVNAMDDAGVTPLHLAAKRGHLEI--VEVLLKHGADVNASDIWGRTPLHLA 87
Query: 387 ALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLD 435
           A     + V+ L+ +GAD++++   G +A  I + N    ++ + +KL+
Sbjct: 88  ATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 136

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/109 (35%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
Query: 327 MEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIA 386
           + +L+  G+ VNA D    TPLH +  +  L +  +E+LLK GA+VNARDI+G +P+H+A
Sbjct: 30  VRILMANGADVNAMDDAGVTPLHLAAKRGHLEI--VEVLLKHGADVNARDIWGRTPLHLA 87
Query: 387 ALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLD 435
           A     + V+ L+ +GAD++++   G +A  I + N    ++ + +KL+
Sbjct: 88  ATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 136

>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human Mcl1 Length = 167

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
Query: 285 AAENGYVECLRILLE-NHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCD 343
           AA+ G VE ++ L      NC +   ++  PLH AA    V  +E LL+ G+ V+A D  
Sbjct: 17  AAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKG 76
Query: 344 NRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGA 403
              PLH + S     V   E+L+K GA VN  D++ ++P+H AA     +    L+ HGA
Sbjct: 77  GLVPLHNACSYGHYEV--AELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGA 134
Query: 404 DISSKTPSGSSALSII 419
           D + K   G++ L ++
Sbjct: 135 DPTKKNRDGNTPLDLV 150

>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human 3bp2 Length = 165

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
Query: 285 AAENGYVECLRILLE-NHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCD 343
           AA+ G VE ++ L      NC +   ++  PLH AA    V  +E LL+ G+ V+A D  
Sbjct: 15  AAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKG 74
Query: 344 NRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGA 403
              PLH + S     V   E+L+K GA VN  D++ ++P+H AA     +    L+ HGA
Sbjct: 75  GLVPLHNACSYGHYEV--AELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGA 132
Query: 404 DISSKTPSGSSALSII 419
           D + K   G++ L ++
Sbjct: 133 DPTKKNRDGNTPLDLV 148

>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo Form) Length = 175

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
Query: 285 AAENGYVECLRILLE-NHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCD 343
           AA+ G VE ++ L      NC +   ++  PLH AA    V  +E LL+ G+ V+A D  
Sbjct: 19  AAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKG 78
Query: 344 NRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGA 403
              PLH + S     V   E+L+K GA VN  D++ ++P+H AA     +    L+ HGA
Sbjct: 79  GLVPLHNACSYGHYEV--AELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGA 136
Query: 404 DISSKTPSGSSALSII 419
           D + K   G++ L ++
Sbjct: 137 DPTKKNRDGNTPLDLV 152

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 125/261 (47%), Gaps = 33/261 (12%)
Query: 151 KYGALHLAAFNGSIKGCSWLMLHGHDINFT-KDSYTPLHFAVLGNYVDCAKFLIKNKAHI 209
           K   LHLAA    ++    L+ HG D++   K    PLH A    + +  + L+K+ A +
Sbjct: 58  KSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACV 117
Query: 210 HE------TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLI------- 256
           +       T +H A S N V+   LLLS   +P ++N  G S + +A    L        
Sbjct: 118 NAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEF 177
Query: 257 ---SCLKAILDSGMADV---------DIKTKERRVTALHLAAENGYV---ECLRILLENH 301
              S L+A  ++ +A V         + K  +   TALH A  + +    +   +LL   
Sbjct: 178 KGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKG 237
Query: 302 ANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLH-ASLSKNILSVH 360
           AN NE+N     PLH+AA+    + ME+L + G+++NA D   +T LH A+L+ ++ +  
Sbjct: 238 ANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTC- 296
Query: 361 PLEILLKWGANVNARDIFGYS 381
              +LL +G++ +   + G++
Sbjct: 297 --RLLLSYGSDPSIISLQGFT 315

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 87/169 (51%), Gaps = 10/169 (5%)
Query: 260 KAILDSGMADVDIK---TKERRVTALHLAAENGYVECLRILLEN-HANCNERNHKEQIPL 315
           K+ LD  +AD   K   T E +   L  AA +G  E L  LL   + NC+  + ++  PL
Sbjct: 5   KSALD--LADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPL 62
Query: 316 HLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNAR 375
           HLAA    V  +++LL+ G+ V+A D     PLH + S     V   E+LLK GA VNA 
Sbjct: 63  HLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEV--TELLLKHGACVNAM 120
Query: 376 DIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTP 424
           D++ ++P+H AA     +    L+ HGAD +     G SA  + M  TP
Sbjct: 121 DLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSA--VDMAPTP 167

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/93 (43%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Query: 243 GVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHA 302
           G +PLH+AA  G +  +K +L++G ADV+ K K  R T LHLAA NG++E +++LLE  A
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGR-TPLHLAARNGHLEVVKLLLEAGA 59
Query: 303 NCNERNHKEQIPLHLAAKCQSVECMEMLLRKGS 335
           + N ++   + PLHLAA+   +E +++LL  G+
Sbjct: 60  DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/91 (42%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
Query: 280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNA 339
           T LHLAA NG++E +++LLE  A+ N ++   + PLHLAA+   +E +++LL  G+ VNA
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63
Query: 340 SDCDNRTPLHASLSKNILSVHPLEILLKWGA 370
            D + RTPLH +     L V  +++LL+ GA
Sbjct: 64  KDKNGRTPLHLAARNGHLEV--VKLLLEAGA 92

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/92 (41%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Query: 312 QIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGAN 371
           + PLHLAA+   +E +++LL  G+ VNA D + RTPLH +     L V  +++LL+ GA+
Sbjct: 3   RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEV--VKLLLEAGAD 60
Query: 372 VNARDIFGYSPIHIAALSELSQCVDCLIMHGA 403
           VNA+D  G +P+H+AA +   + V  L+  GA
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA  G  + +RIL  N A+ N  ++    PLHLAA    +E +E+LL+ G+ VNA+    
Sbjct: 21  AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIA 386
           RTPLH +   + L +  +E+LLK GA+VNA+D FG +   I+
Sbjct: 81  RTPLHLAAWADHLEI--VEVLLKHGADVNAQDKFGKTAFDIS 120

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/117 (33%), Positives = 69/117 (58%), Gaps = 2/117 (1%)
Query: 318 AAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDI 377
           AA+    + + +L   G+ VNA+D    TPLH  L+  +  +  +E+LLK GA+VNA   
Sbjct: 21  AARAGQDDEVRILTANGADVNANDYWGHTPLH--LAAMLGHLEIVEVLLKNGADVNATGN 78
Query: 378 FGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKL 434
            G +P+H+AA ++  + V+ L+ HGAD++++   G +A  I + N    ++ + +KL
Sbjct: 79  TGRTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 135

>pdb|1AWC|B Chain B, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 153

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 3/146 (2%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA  G  + +RIL+ N A     +     PLHLAA+       E+LLR G   +A    +
Sbjct: 9   AARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVD 67
Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
           RTPLH + S+   ++  +E+LLK GA+VNA+D+   + +H A      + V+ LI +GAD
Sbjct: 68  RTPLHMAASEGHANI--VEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGAD 125
Query: 405 ISSKTPSGSSALSIIMRNTPSSISSV 430
           + +++    +A  I + N    ++ +
Sbjct: 126 VHTQSKFCKTAFDISIDNGNEDLAEI 151

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 35/213 (16%)
Query: 153 GALHLAA-FNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGNYVDCAKFLIKNKAHIH 210
           GA+ LAA  +G  +    L+  G DIN+   D  T LH A + + VD  KFL++N A+I+
Sbjct: 41  GAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANIN 100
Query: 211 ETI------VHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAA------------- 251
           +        +H+A S   +D  + L+S   +   +N++G +PL IA              
Sbjct: 101 QPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVN 160
Query: 252 -------------DRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILL 298
                        +R ++   +  L+SG  + D++  +   TALH+AA  GY E L++L+
Sbjct: 161 RQGVDIEAARKEEERIMLRDARQWLNSGHIN-DVRHAKSGGTALHVAAAKGYTEVLKLLI 219
Query: 299 ENHANCNERNHKEQIPLHLAAKCQSVECMEMLL 331
           +   + N +++    PLH AA     E   +L+
Sbjct: 220 QARYDVNIKDYDGWTPLHAAAHWGKEEACRILV 252

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 44/70 (62%)
Query: 279 VTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVN 338
           +TALH A  +  V+ ++ L+EN AN N+ +++  IPLH AA C  ++  E L+ +G+ V 
Sbjct: 74  LTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVG 133
Query: 339 ASDCDNRTPL 348
           A + +  TPL
Sbjct: 134 AVNSEGDTPL 143

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 319 AKCQSVECMEML--LRKGSQVNASDCDNRTPLH-ASLSKNILSVHPLEILLKWGANVNAR 375
           A C S +  E+L  L +G+ +N ++ D  T LH A +  N+  V   + L++ GAN+N  
Sbjct: 46  AACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMV---KFLVENGANINQP 102
Query: 376 DIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSI 418
           D  G+ P+H AA        + LI  GA + +    G + L I
Sbjct: 103 DNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDI 145

>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/118 (33%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 318 AAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDI 377
           AA+    + + +L+  G+ VNA D    TPLH +   + L +  +E+LLK GA+VNA D 
Sbjct: 21  AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEI--VEVLLKNGADVNAIDA 78
Query: 378 FGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLD 435
            G +P+H+ A+    + V+ L+ HGAD++++   G +A  I + N    ++ + +KL+
Sbjct: 79  IGETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 136

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/118 (32%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 318 AAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDI 377
           AA+    + + +L+  G+ VNA D    TPL+ + +   L +  +E+LLK GA+VNA D 
Sbjct: 21  AARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEI--VEVLLKNGADVNAVDA 78
Query: 378 FGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLD 435
            G++P+H+AA     +  + L+ HGAD++++   G +A  I + N    ++ + +KL+
Sbjct: 79  IGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 69.3 bits (168), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 8/177 (4%)
Query: 181 KDSYTPLHFAVLGNYVDCAKFLIK------NKAHIHETIVHSAVSTNAVDCVQLLLSLQI 234
           +DS T LH+A    + +  +FL++      +K     + +H A S    + V+ LL    
Sbjct: 38  QDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGA 97
Query: 235 NPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECL 294
             N +N  G +PLH AA +        +L+ G A+ D K      TA+H AA  G ++ +
Sbjct: 98  QVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG-ANPDAK-DHYEATAMHRAAAKGNLKMI 155
Query: 295 RILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHAS 351
            ILL   A+ N ++ +   PLHLA   + VE  ++L+ +G+ +   + + +TPL  +
Sbjct: 156 HILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 212

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 98/192 (51%), Gaps = 6/192 (3%)
Query: 259 LKAILDSGMADVDI--KTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLH 316
           L+ + +S +AD  +  +T +   TALH A   G+ E +  LL+     N+++     PLH
Sbjct: 19  LEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLH 78
Query: 317 LAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEI-LLKWGANVNAR 375
           +AA     E ++ LL KG+QVNA + +  TPLH + SKN    H + + LL+ GAN +A+
Sbjct: 79  IAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKN---RHEIAVMLLEGGANPDAK 135
Query: 376 DIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLD 435
           D +  + +H AA     + +  L+ + A  + +   G++ L +         + +     
Sbjct: 136 DHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQG 195
Query: 436 SSISLQDPEAST 447
           +SI +++ E  T
Sbjct: 196 ASIYIENKEEKT 207

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 69.3 bits (168), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 8/177 (4%)
Query: 181 KDSYTPLHFAVLGNYVDCAKFLIK------NKAHIHETIVHSAVSTNAVDCVQLLLSLQI 234
           +DS T LH+A    + +  +FL++      +K     + +H A S    + V+ LL    
Sbjct: 39  QDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGA 98
Query: 235 NPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECL 294
             N +N  G +PLH AA +        +L+ G A+ D K      TA+H AA  G ++ +
Sbjct: 99  QVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG-ANPDAK-DHYEATAMHRAAAKGNLKMI 156
Query: 295 RILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHAS 351
            ILL   A+ N ++ +   PLHLA   + VE  ++L+ +G+ +   + + +TPL  +
Sbjct: 157 HILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 213

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 88/163 (53%), Gaps = 6/163 (3%)
Query: 259 LKAILDSGMADVDI--KTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLH 316
           L+ + +S +AD  +  +T +   TALH A   G+ E +  LL+     N+++     PLH
Sbjct: 20  LEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLH 79
Query: 317 LAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEI-LLKWGANVNAR 375
           +AA     E ++ LL KG+QVNA + +  TPLH + SKN    H + + LL+ GAN +A+
Sbjct: 80  IAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKN---RHEIAVMLLEGGANPDAK 136
Query: 376 DIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSI 418
           D +  + +H AA     + +  L+ + A  + +   G++ L +
Sbjct: 137 DHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHL 179

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 2/136 (1%)
Query: 312 QIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGAN 371
           +  LH A      E +E LL+ G  VN  D    +PLH + S     +  ++ LL  GA 
Sbjct: 42  RTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEI--VKALLGKGAQ 99
Query: 372 VNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVR 431
           VNA +  G +P+H AA     +    L+  GA+  +K    ++A+          +  + 
Sbjct: 100 VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHIL 159
Query: 432 KKLDSSISLQDPEAST 447
               +S ++QD E +T
Sbjct: 160 LYYKASTNIQDTEGNT 175

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 4/175 (2%)
Query: 212 TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVD 271
           T +H A S    + V+ LL L +  N  ++ G SPLHIAA  G    +KA+L  G A V+
Sbjct: 42  TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKG-AHVN 100
Query: 272 IKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLL 331
               +   T LH AA     E   +LLE  AN + ++H +   +H AA   +++ + +LL
Sbjct: 101 A-VNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILL 159
Query: 332 RKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIA 386
              +  N  D +  TPLH +  +    V   + L+  GA++   +    +P+ +A
Sbjct: 160 FYKASTNIQDTEGNTPLHLACDEE--RVEEAKFLVTQGASIYIENKEEKTPLQVA 212

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 4/196 (2%)
Query: 273 KTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLR 332
           +T +   TALH A   G+ E +  LL+     N+++     PLH+AA     E ++ LL 
Sbjct: 35  RTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLV 94
Query: 333 KGSQVNASDCDNRTPLHASLSKNILSVHPLEI-LLKWGANVNARDIFGYSPIHIAALSEL 391
           KG+ VNA + +  TPLH + SKN    H + + LL+ GAN +A+D +  + +H AA    
Sbjct: 95  KGAHVNAVNQNGCTPLHYAASKN---RHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGN 151
Query: 392 SQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQDPEASTKDIE 451
            + V  L+ + A  + +   G++ L +         +       +SI +++ E  T    
Sbjct: 152 LKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQV 211
Query: 452 LKLNFKYILQNGPDGE 467
            K     IL+   +GE
Sbjct: 212 AKGGLGLILKRLAEGE 227

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 4/175 (2%)
Query: 212 TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVD 271
           T +H A S    + V+ LL L +  N  ++ G SPLHIAA  G    +KA+L  G A V+
Sbjct: 42  TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVKG-AHVN 100
Query: 272 IKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLL 331
               +   T LH AA     E   +LLE  AN + ++H +   +H AA   +++ + +LL
Sbjct: 101 A-VNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILL 159
Query: 332 RKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIA 386
              +  N  D +  TPLH +  +    V   + L+  GA++   +    +P+ +A
Sbjct: 160 FYKASTNIQDTEGNTPLHLACDEE--RVEEAKFLVTQGASIYIENKEEKTPLQVA 212

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 4/196 (2%)
Query: 273 KTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLR 332
           +T +   TALH A   G+ E +  LL+     N+++     PLH+AA     E ++ LL 
Sbjct: 35  RTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLV 94
Query: 333 KGSQVNASDCDNRTPLHASLSKNILSVHPLEI-LLKWGANVNARDIFGYSPIHIAALSEL 391
           KG+ VNA + +  TPLH + SKN    H + + LL+ GAN +A+D +  + +H AA    
Sbjct: 95  KGAHVNAVNQNGCTPLHYAASKN---RHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGN 151
Query: 392 SQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQDPEASTKDIE 451
            + V  L+ + A  + +   G++ L +         +       +SI +++ E  T    
Sbjct: 152 LKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQV 211
Query: 452 LKLNFKYILQNGPDGE 467
            K     IL+   +GE
Sbjct: 212 AKGGLGLILKRLAEGE 227

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 67.0 bits (162), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNA 339
           T LH AA+NG+ E ++ LL   A+ N R+     PLHLAAK    E +++LL KG+ VNA
Sbjct: 11  TPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNA 70
Query: 340 SDCDNRTPLHASLSKNILSVHPLEILLKWGANVNAR 375
              D  TP H  L+K       +++L   GA+VNAR
Sbjct: 71  RSKDGNTPEH--LAKKNGHHEIVKLLDAKGADVNAR 104

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 314 PLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVN 373
           PLH AAK    E ++ LL KG+ VNA   D  TPLH +       +  +++LL  GA+VN
Sbjct: 12  PLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEI--VKLLLAKGADVN 69
Query: 374 ARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKT 409
           AR   G +P H+A  +   + V  L   GAD+++++
Sbjct: 70  ARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105

>pdb|2DZN|A Chain A, Crystal Structure Analysis Of Yeast Nas6p Complexed With The Proteasome Subunit, Rpt3 Length = 228

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 11/183 (6%)
Query: 183 SYTPLHFAVLGNYVDCAKFLIKNKAHI-------HETIVHSAVSTNAVDCVQLLLSLQIN 235
           S  PLH A + N     + L+ +K  +           +H +VS  A +    LLS   N
Sbjct: 2   SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMEN 61
Query: 236 PNV---LNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVE 292
            N+    ++ G +P HIA   G +  +K++ D  +     K   + VT LHLA    + E
Sbjct: 62  VNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFE 121
Query: 293 CLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKG-SQVNASDCDNRTPLHAS 351
             + L+EN A+   ++   QIPLH AA   S++ +E+L   G S VN  D    TPL  +
Sbjct: 122 VSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHA 181
Query: 352 LSK 354
           L++
Sbjct: 182 LAE 184

>pdb|1IXV|A Chain A, Crystal Structure Analysis Of Homolog Of Oncoprotein Gankyrin, An Interactor Of Rb And Cdk46 Length = 231

Iteration: 1
 Score = 66.2 bits (160), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 4/145 (2%)
Query: 214 VHSAVSTNAVDCVQLLLSLQINPNV---LNNKGVSPLHIAADRGLISCLKAILDSGMADV 270
           +H +VS  A +    LLS   N N+    ++ G +P HIA   G +  +K++ D  +   
Sbjct: 40  LHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPD 99
Query: 271 DIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEML 330
             K   + VT LHLA    + E  + L+EN A+   ++   QIPLH AA   S++ +E+L
Sbjct: 100 LNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELL 159
Query: 331 LRKG-SQVNASDCDNRTPLHASLSK 354
              G S VN  D    TPL  +L++
Sbjct: 160 CGLGKSAVNWQDKQGWTPLFHALAE 184

>pdb|1WG0|A Chain A, Structural Comparison Of Nas6p Protein Structures In Two Different Crystal Forms Length = 243

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 4/145 (2%)
Query: 214 VHSAVSTNAVDCVQLLLSLQINPNV---LNNKGVSPLHIAADRGLISCLKAILDSGMADV 270
           +H +VS  A +    LLS   N N+    ++ G +P HIA   G +  +K++ D  +   
Sbjct: 40  LHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPD 99
Query: 271 DIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEML 330
             K   + VT LHLA    + E  + L+EN A+   ++   QIPLH AA   S++ +E+L
Sbjct: 100 LNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELL 159
Query: 331 LRKG-SQVNASDCDNRTPLHASLSK 354
              G S VN  D    TPL  +L++
Sbjct: 160 CGLGKSAVNWQDKQGWTPLFHALAE 184

>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin Repeat Domain Of Varp Length = 269

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/174 (27%), Positives = 88/174 (50%), Gaps = 4/174 (2%)
Query: 274 TKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRK 333
           T +   + LH+AA +G  + + +LL++ AN   RN  + +PLHLA +    + ++ LL  
Sbjct: 82  TSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDS 141
Query: 334 GSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQ 393
            ++ N  D    TPL  + S     +  + +LL+ GA++NA +  G + +H A + +   
Sbjct: 142 NAKPNKKDLSGNTPLIYACSGGHHEL--VALLLQHGASINASNNKGNTALHEAVIEKHVF 199
Query: 394 CVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQDPEAST 447
            V+ L++HGA +        +A+    +N  S I  + + + S ++  D  A T
Sbjct: 200 VVELLLLHGASVQVLNKRQRTAVDCAEQN--SKIMELLQVVPSCVASLDDVAET 251

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Query: 270 VDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEM 329
           +D  T  R  T LH+A+  G +  +  LL+N ++ N ++H    PLH A     ++ +E+
Sbjct: 2   IDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVEL 61
Query: 330 LLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPI 383
           LL+  + VN +   N +PLH +     + +  +++LL +GA+ NA +IFG  P+
Sbjct: 62  LLQHKALVNTTGYQNDSPLHDAAKNGHVDI--VKLLLSYGASRNAVNIFGLRPV 113

>pdb|1WDY|A Chain A, Crystal Structure Of Ribonuclease Length = 285

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 212 TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVD 271
           T +H+AV  +  D V+LLL    +P +    G +P  +AA  G +  LK  L  G ADV+
Sbjct: 41  TPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKG-ADVN 99
Query: 272 IKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHL----------AAKC 321
            +      TA   AA  G V+ L+ L +  AN N R   ++    L          AA+ 
Sbjct: 100 -ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK 158
Query: 322 QSVECMEMLLRK-GSQVNASDCDNRTPL-HASLSKNILSVHPL-EILLKWGANVNARDIF 378
             VE +++LL + G+ VNA D   R  L HA LS +   V  +  +LL  GA+VN R   
Sbjct: 159 GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGER 218
Query: 379 GYSPIHIA 386
           G +P+ +A
Sbjct: 219 GKTPLILA 226

>pdb|4G8K|A Chain A, Intact Sensor Domain Of Human Rnase L In The Inactive Signaling State Length = 337

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 212 TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVD 271
           T +H+AV  +  D V+LLL    +P +    G +P  +AA  G +  LK  L  G ADV+
Sbjct: 61  TPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKG-ADVN 119
Query: 272 IKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHL----------AAKC 321
            +      TA   AA  G V+ L+ L +  AN N R   ++    L          AA+ 
Sbjct: 120 -ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK 178
Query: 322 QSVECMEMLLRK-GSQVNASDCDNRTPL-HASLSKNILSVHPL-EILLKWGANVNARDIF 378
             VE +++LL + G+ VNA D   R  L HA LS +   V  +  +LL  GA+VN R   
Sbjct: 179 GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGER 238
Query: 379 GYSPIHIA 386
           G +P+ +A
Sbjct: 239 GKTPLILA 246

>pdb|1OT8|A Chain A, Structure Of The Ankyrin Domain Of The Drosophila Notch Receptor Length = 239

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 170 LMLHGHDINFTKDSY--TPLHFAVLGNYVDCAKFLIKNKAHIH------ETIVHSAVSTN 221
           L+  G ++N T D    T LH A      D AK L+   A  +       T +H+AV+ +
Sbjct: 36  LLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAAD 95
Query: 222 AVDCVQLLL-SLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERR-V 279
           A+   Q+LL +   N N   + G +PL +AA   +   ++ ++    AD DI   +    
Sbjct: 96  AMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLI---TADADINAADNSGK 152
Query: 280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNA 339
           TALH AA     E + ILL +HAN + ++ K++ PL LAA+  S E  + LL   +    
Sbjct: 153 TALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREI 212
Query: 340 SDCDNRTP 347
           +D  +R P
Sbjct: 213 TDHMDRLP 220

>pdb|1OT8|A Chain A, Structure Of The Ankyrin Domain Of The Drosophila Notch Receptor Length = 239

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 58/176 (32%), Positives = 87/176 (49%), Gaps = 24/176 (13%)
Query: 243 GVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHA 302
           G++PL IAA RG        LD+G    DI+  E           +   + +  LL   A
Sbjct: 2   GLTPLMIAAVRG------GGLDTGE---DIENNE-----------DSTAQVISDLLAQGA 41
Query: 303 NCNERNHKE-QIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHP 361
             N    K  +  LHLAA+    +  + LL  G+  N+ D   RTPLHA+++ + + V  
Sbjct: 42  ELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGV-- 99
Query: 362 LEILLKWGA-NVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSAL 416
            +ILL+  A N+NAR   G +P+ +AA   +   V+ LI   ADI++   SG +AL
Sbjct: 100 FQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTAL 155

>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein Length = 192

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNA 339
           T L +A   G    +  L+EN     +++ +    L  A K   +   E LL KGS VN 
Sbjct: 37  TPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNT 96
Query: 340 SDCDNRTPLHASLSKNILSVHPLE-ILLKWGANVNARDIFGYSPIHIAALSELSQCVDCL 398
            D   +TPL  S+   I     +   LL+ GANVN R++ G +P+ +A+    S+ V  L
Sbjct: 97  KDFSGKTPLMWSI---IFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKL 153
Query: 399 IMHGADISSKTPSGSSA 415
           +  GADIS++  +G +A
Sbjct: 154 LELGADISARDLTGLTA 170

>pdb|1NFI|E Chain E, I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 32/179 (17%)
Query: 208 HIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGM 267
           ++ +T +H AV TN  +  + LL    +P + + +G +PLH+A ++G   CL        
Sbjct: 40  NLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQG---CL-------- 88
Query: 268 ADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECM 327
           A V + T+    T  HL                H+     N+     LHLA+    +  +
Sbjct: 89  ASVGVLTQS--CTTPHL----------------HSILKATNYNGHTCLHLASIHGYLGIV 130
Query: 328 EMLLRKGSQVNASD-CDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHI 385
           E+L+  G+ VNA + C+ RT LH  L+ ++ +   + +LLK GA+VN     GYSP  +
Sbjct: 131 ELLVSLGADVNAQEPCNGRTALH--LAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQL 187

>pdb|1NFI|E Chain E, I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 19/140 (13%)
Query: 291 VECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHA 350
           +E +R +  + A  N +N+ +Q PLHLA      E  E LL  G      D    TPLH 
Sbjct: 22  MEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHL 81
Query: 351 S-----------LSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLI 399
           +           L+++  + H   IL        A +  G++ +H+A++      V+ L+
Sbjct: 82  ACEQGCLASVGVLTQSCTTPHLHSIL-------KATNYNGHTCLHLASIHGYLGIVELLV 134
Query: 400 MHGADISSKTP-SGSSALSI 418
             GAD++++ P +G +AL +
Sbjct: 135 SLGADVNAQEPCNGRTALHL 154

>pdb|1IKN|D Chain D, IkappabalphaNF-Kappab Complex Length = 236

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 11/156 (7%)
Query: 237 NVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRI 296
           N  NN   +PLH+A         +A+L +G  D +++   R  T LHLA E G +  + +
Sbjct: 39  NFQNNLQQTPLHLAVITNQPEIAEALLGAG-CDPELRDF-RGNTPLHLACEQGCLASVGV 96
Query: 297 LLEN------HANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASD-CDNRTPLH 349
           L ++      H+     N+     LHLA+    +  +E+L+  G+ VNA + C+ RT LH
Sbjct: 97  LTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALH 156
Query: 350 ASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHI 385
             L+ ++ +   + +LLK GA+VN     GYSP  +
Sbjct: 157 --LAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQL 190

>pdb|2QC9|A Chain A, Mouse Notch 1 Ankyrin Repeat Intracellular Domain Length = 210

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 55/170 (32%), Positives = 91/170 (53%), Gaps = 9/170 (5%)
Query: 185 TPLHFAVLGNYVDCAKFLIKNKA------HIHETIVHSAVSTNAVDCVQLLL-SLQINPN 237
           T LH A   +  D AK L++  A      ++  T +H+AVS +A    Q+LL +   + +
Sbjct: 24  TALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAAVSADAQGVFQILLRNRATDLD 83
Query: 238 VLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRIL 297
              + G +PL +AA   L   L+ +++S  ADV+    +   +ALH AA    V+   +L
Sbjct: 84  ARMHDGTTPLILAARLALEGMLEDLINS-HADVN-AVDDLGKSALHWAAAVNNVDAAVVL 141
Query: 298 LENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTP 347
           L+N AN + +N+KE+ PL LAA+  S E  ++LL   +  + +D  +R P
Sbjct: 142 LKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLP 191

>pdb|2QC9|A Chain A, Mouse Notch 1 Ankyrin Repeat Intracellular Domain Length = 210

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 305 NERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEI 364
           N+ +   +  LHLAA+    +  + LL   +     D   RTPLHA++S +   V   +I
Sbjct: 16  NQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAAVSADAQGV--FQI 73
Query: 365 LLKWGA-NVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSAL 416
           LL+  A +++AR   G +P+ +AA   L   ++ LI   AD+++    G SAL
Sbjct: 74  LLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLGKSAL 126

>pdb|3V30|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Rfxank Length = 172

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 7/138 (5%)
Query: 214 VHSAVSTNAVDCVQLLLSLQINPNVLNN---KGVSPLHIAADRGLISCLKAILDSGMADV 270
           +H   +   +D  QL   L+   N++N    +G +PL  A+  G I  ++ +L+ G AD 
Sbjct: 6   IHQLAAQGELD--QLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWG-ADP 62
Query: 271 DIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEML 330
            I  KER  +AL LA+  GY + + +LLE   + N  +     PL  A +   V+C+E L
Sbjct: 63  HILAKERE-SALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEAL 121
Query: 331 LRKGSQVNASDCDNRTPL 348
           L +G+ +        TP+
Sbjct: 122 LARGADLTTEADSGYTPM 139

>pdb|3UXG|A Chain A, Crystal Structure Of Rfxank Length = 172

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 7/138 (5%)
Query: 214 VHSAVSTNAVDCVQLLLSLQINPNVLNN---KGVSPLHIAADRGLISCLKAILDSGMADV 270
           +H   +   +D  QL   L+   N++N    +G +PL  A+  G I  ++ +L+ G AD 
Sbjct: 6   IHQLAAQGELD--QLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWG-ADP 62
Query: 271 DIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEML 330
            I  KER  +AL LA+  GY + + +LLE   + N  +     PL  A     V+C+E L
Sbjct: 63  HILAKERE-SALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVHGNHVKCVEAL 121
Query: 331 LRKGSQVNASDCDNRTPL 348
           L +G+ +        TP+
Sbjct: 122 LARGADLTTEADSGYTPM 139

>pdb|2HE0|A Chain A, Crystal Structure Of A Human Notch1 Ankyrin Domain Mutant Length = 253

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 52/170 (30%), Positives = 91/170 (53%), Gaps = 9/170 (5%)
Query: 185 TPLHFAVLGNYVDCAKFLIKNKA------HIHETIVHSAVSTNAVDCVQLLL-SLQINPN 237
           T LH A   +  D AK L++  A      ++  T +H+AVS +A    Q+L+ +   + +
Sbjct: 59  TALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD 118
Query: 238 VLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRIL 297
              + G +PL +AA   +   L+ +++S  ADV+    +   +ALH AA    V+   +L
Sbjct: 119 ARMHDGTTPLILAARLAVEGMLEDLINS-HADVN-AVDDLGKSALHWAAAVNNVDAAVVL 176
Query: 298 LENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTP 347
           L+N AN + +N++E+ PL LAA+  S E  ++LL   +  + +D  +R P
Sbjct: 177 LKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLP 226

>pdb|2HE0|A Chain A, Crystal Structure Of A Human Notch1 Ankyrin Domain Mutant Length = 253

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 27/190 (14%)
Query: 234 INPNVLNNKGVSPLHIAADRGLISCLKAILDSGM------------------ADVDIKTK 275
           ++ NV    G +PL IA      SC    L++G                   A +  +T 
Sbjct: 1   MDVNVRGPDGFTPLMIA------SCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTD 54
Query: 276 ERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLR-KG 334
               TALHLAA     +  + LLE  A+ N +++  + PLH A    +    ++L+R + 
Sbjct: 55  RTGATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRA 114
Query: 335 SQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQC 394
           + ++A   D  TPL   L+  +     LE L+   A+VNA D  G S +H AA       
Sbjct: 115 TDLDARMHDGTTPL--ILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDA 172
Query: 395 VDCLIMHGAD 404
              L+ +GA+
Sbjct: 173 AVVLLKNGAN 182

>pdb|2HE0|A Chain A, Crystal Structure Of A Human Notch1 Ankyrin Domain Mutant Length = 253

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 305 NERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEI 364
           N+ +      LHLAA     +  + LL   +  N  D   RTPLHA++S +   V   +I
Sbjct: 51  NQTDRTGATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGV--FQI 108
Query: 365 LLKWGA-NVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSAL 416
           L++  A +++AR   G +P+ +AA   +   ++ LI   AD+++    G SAL
Sbjct: 109 LIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSAL 161

>pdb|2F8X|K Chain K, Crystal Structure Of Activated Notch, Csl And Maml On Hes-1 Promoter Dna Sequence Length = 256

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 52/170 (30%), Positives = 91/170 (53%), Gaps = 9/170 (5%)
Query: 185 TPLHFAVLGNYVDCAKFLIKNKA------HIHETIVHSAVSTNAVDCVQLLL-SLQINPN 237
           T LH A   +  D AK L++  A      ++  T +H+AVS +A    Q+L+ +   + +
Sbjct: 60  TALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD 119
Query: 238 VLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRIL 297
              + G +PL +AA   +   L+ +++S  ADV+    +   +ALH AA    V+   +L
Sbjct: 120 ARMHDGTTPLILAARLAVEGMLEDLINS-HADVN-AVDDLGKSALHWAAAVNNVDAAVVL 177
Query: 298 LENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTP 347
           L+N AN + +N++E+ PL LAA+  S E  ++LL   +  + +D  +R P
Sbjct: 178 LKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLP 227

>pdb|2F8X|K Chain K, Crystal Structure Of Activated Notch, Csl And Maml On Hes-1 Promoter Dna Sequence Length = 256

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLR-KGSQVN 338
           TALHLAA     +  + LLE  A+ N +++  + PLH A    +    ++L+R + + ++
Sbjct: 60  TALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD 119
Query: 339 ASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCL 398
           A   D  TPL   L+  +     LE L+   A+VNA D  G S +H AA          L
Sbjct: 120 ARMHDGTTPL--ILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVL 177
Query: 399 IMHGAD 404
           + +GA+
Sbjct: 178 LKNGAN 183

>pdb|1YYH|A Chain A, Crystal Structure Of The Human Notch 1 Ankyrin Domain Length = 253

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 52/170 (30%), Positives = 91/170 (53%), Gaps = 9/170 (5%)
Query: 185 TPLHFAVLGNYVDCAKFLIKNKA------HIHETIVHSAVSTNAVDCVQLLL-SLQINPN 237
           T LH A   +  D AK L++  A      ++  T +H+AVS +A    Q+L+ +   + +
Sbjct: 59  TALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD 118
Query: 238 VLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRIL 297
              + G +PL +AA   +   L+ +++S  ADV+    +   +ALH AA    V+   +L
Sbjct: 119 ARMHDGTTPLILAARLAVEGMLEDLINS-HADVN-AVDDLGKSALHWAAAVNNVDAAVVL 176
Query: 298 LENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTP 347
           L+N AN + +N++E+ PL LAA+  S E  ++LL   +  + +D  +R P
Sbjct: 177 LKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLP 226

>pdb|1YYH|A Chain A, Crystal Structure Of The Human Notch 1 Ankyrin Domain Length = 253

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLR-KGSQVN 338
           TALHLAA     +  + LLE  A+ N +++  + PLH A    +    ++L+R + + ++
Sbjct: 59  TALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD 118
Query: 339 ASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCL 398
           A   D  TPL   L+  +     LE L+   A+VNA D  G S +H AA          L
Sbjct: 119 ARMHDGTTPL--ILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVL 176
Query: 399 IMHGAD 404
           + +GA+
Sbjct: 177 LKNGAN 182

>pdb|2F8Y|A Chain A, Crystal Structure Of Human Notch1 Ankyrin Repeats To 1.55a Resolution. Length = 223

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 52/170 (30%), Positives = 91/170 (53%), Gaps = 9/170 (5%)
Query: 185 TPLHFAVLGNYVDCAKFLIKNKA------HIHETIVHSAVSTNAVDCVQLLL-SLQINPN 237
           T LH A   +  D AK L++  A      ++  T +H+AVS +A    Q+L+ +   + +
Sbjct: 27  TALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD 86
Query: 238 VLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRIL 297
              + G +PL +AA   +   L+ +++S  ADV+    +   +ALH AA    V+   +L
Sbjct: 87  ARMHDGTTPLILAARLAVEGMLEDLINS-HADVN-AVDDLGKSALHWAAAVNNVDAAVVL 144
Query: 298 LENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTP 347
           L+N AN + +N++E+ PL LAA+  S E  ++LL   +  + +D  +R P
Sbjct: 145 LKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLP 194

>pdb|2F8Y|A Chain A, Crystal Structure Of Human Notch1 Ankyrin Repeats To 1.55a Resolution. Length = 223

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLR-KGSQVN 338
           TALHLAA     +  + LLE  A+ N +++  + PLH A    +    ++L+R + + ++
Sbjct: 27  TALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD 86
Query: 339 ASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCL 398
           A   D  TPL   L+  +     LE L+   A+VNA D  G S +H AA          L
Sbjct: 87  ARMHDGTTPL--ILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVL 144
Query: 399 IMHGAD 404
           + +GA+
Sbjct: 145 LKNGAN 150

>pdb|3EU9|A Chain A, The Ankyrin Repeat Domain Of Huntingtin Interacting Protein 14 Length = 240

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 3/180 (1%)
Query: 240 NNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLE 299
           + + V+ LH AA    I  +K  +  G A VD    +   T LH A   G++  +  L++
Sbjct: 39  DKENVTLLHWAAINNRIDLVKYYISKG-AIVDQLGGDLNSTPLHWATRQGHLSMVVQLMK 97
Query: 300 NHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSV 359
             A+ +  + +    +HLAA+      +  L+ KG  V+  D +  TPL  +  +   SV
Sbjct: 98  YGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRT-HSV 156
Query: 360 HPLEILLKWGANVNARDIF-GYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSI 418
            P  +LL +  +VN  D +   + +H A L+  +  +  L+  GA++ ++   G SAL +
Sbjct: 157 DPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDL 216

>pdb|3V2O|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 183

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
Query: 237 NVLNN---KGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVEC 293
           NV+N+   +G +PL  AA  G I+ ++ +L +G AD  +  K R  +AL LA   GY + 
Sbjct: 43  NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNG-ADPQLLGKGRE-SALSLACSKGYTDI 100
Query: 294 LRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGS 335
           +++LL+   + NE +     PL  A     V+C++MLL  G+
Sbjct: 101 VKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA 142

>pdb|3V2O|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 183

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 2/150 (1%)
Query: 281 ALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNAS 340
           ++H  A  G +  L   +E     N  + +   PL  AA    +  +E LL+ G+     
Sbjct: 22  SVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLL 81
Query: 341 DCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIM 400
                + L  + SK    +  +++LL  G +VN  D  G +P+  A      +CV  L+ 
Sbjct: 82  GKGRESALSLACSKGYTDI--VKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLE 139
Query: 401 HGADISSKTPSGSSALSIIMRNTPSSISSV 430
            GAD + +T SG +++ + +     S+  V
Sbjct: 140 SGADPTIETDSGYNSMDLAVALGYRSVQQV 169

>pdb|3SO8|A Chain A, Crystal Structure Of Ankra Length = 162

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
Query: 237 NVLNN---KGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVEC 293
           NV+N+   +G +PL  AA  G I+ ++ +L +G AD  +  K R  +AL LA   GY + 
Sbjct: 25  NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNG-ADPQLLGKGRE-SALSLACSKGYTDI 82
Query: 294 LRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGS 335
           +++LL+   + NE +     PL  A     V+C++MLL  G+
Sbjct: 83  VKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA 124

>pdb|3SO8|A Chain A, Crystal Structure Of Ankra Length = 162

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 2/150 (1%)
Query: 281 ALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNAS 340
           ++H  A  G +  L   +E     N  + +   PL  AA    +  +E LL+ G+     
Sbjct: 4   SVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLL 63
Query: 341 DCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIM 400
                + L  + SK    +  +++LL  G +VN  D  G +P+  A      +CV  L+ 
Sbjct: 64  GKGRESALSLACSKGYTDI--VKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLE 121
Query: 401 HGADISSKTPSGSSALSIIMRNTPSSISSV 430
            GAD + +T SG +++ + +     S+  V
Sbjct: 122 SGADPTIETDSGYNSMDLAVALGYRSVQQV 151

>pdb|3V2X|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 167

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
Query: 237 NVLNN---KGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVEC 293
           NV+N+   +G +PL  AA  G I+ ++ +L +G AD  +  K R  +AL LA   GY + 
Sbjct: 27  NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNG-ADPQLLGKGRE-SALSLACSKGYTDI 84
Query: 294 LRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGS 335
           +++LL+   + NE +     PL  A     V+C++MLL  G+
Sbjct: 85  VKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA 126

>pdb|3F6Q|A Chain A, Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat Domain In Complex With Pinch1 Lim1 Domain Length = 179

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Query: 289 GYVECLRILLENHAN-CNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTP 347
           G    +R+ L+N  N  N+ +     PLH A +      +EML+ +G+++N  +  + TP
Sbjct: 16  GNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTP 75
Query: 348 LHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADIS 406
           LH + S     +  ++ LL++ A++NA +  G  P+H A      Q  + L+ +GA +S
Sbjct: 76  LHLAASHGHRDI--VQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVS 132

>pdb|2KBX|A Chain A, Solution Structure Of Ilk-Pinch Complex Length = 171

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Query: 289 GYVECLRILLENHAN-CNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTP 347
           G    +R+ L+N  N  N+ +     PLH A +      +EML+ +G+++N  +  + TP
Sbjct: 11  GNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTP 70
Query: 348 LHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADIS 406
           LH + S     +  ++ LL++ A++NA +  G  P+H A      Q  + L+ +GA +S
Sbjct: 71  LHLAASHGHRDI--VQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVS 127

>pdb|2XEN|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module Length = 91

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/72 (33%), Positives = 44/72 (61%)
Query: 362 LEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMR 421
           + IL+  GA+VNA+D  GY+P+H+AA     + V+ L+  GAD++++   G +A  I + 
Sbjct: 18  VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISID 77
Query: 422 NTPSSISSVRKK 433
           N    ++ + +K
Sbjct: 78  NGNEDLAEILQK 89

>pdb|1MX6|A Chain A, Structure Of P18ink4c (F92n) Length = 168

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 235 NPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECL 294
           NP++ +  G + +H AA  G +  L+ +L++  ADV+I+  E  +  LHLAA+ G++  +
Sbjct: 62  NPDLKDRTGFAVIHDAARAGFLDTLQTLLEN-QADVNIEDNEGNL-PLHLAAKEGHLRVV 119
Query: 295 RILLENHA-NCNERNHKEQIPLHLA 318
             L+++ A N   RNHK      LA
Sbjct: 120 EFLVKHTASNVGHRNHKGDTACDLA 144

>pdb|1AP7|A Chain A, P19-Ink4d From Mouse, Nmr, 20 Structures Length = 168

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 365 LLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTP 424
           LLK GA+ N +D  G SP+H AA +     +  L+ HGAD+++   +GS  + + +R   
Sbjct: 62  LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 121
Query: 425 SSISS 429
           SS+ S
Sbjct: 122 SSVVS 126

>pdb|1BLX|B Chain B, P19ink4dCDK6 COMPLEX Length = 166

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 365 LLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTP 424
           LLK GA+ N +D  G SP+H AA +     +  L+ HGAD+++   +GS  + + +R   
Sbjct: 60  LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 119
Query: 425 SSISS 429
           SS+ S
Sbjct: 120 SSVVS 124

>pdb|1MYO|A Chain A, Solution Structure Of Myotrophin, Nmr, 44 Structures Length = 118

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 333 KGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELS 392
           KG  VN +    R PLH +     L +  LE LL  GA++NA D    +P+  A      
Sbjct: 24  KGEDVNRTLEGGRKPLHYAADCGQLEI--LEFLLLKGADINAPDKHHITPLLSAVYEGHV 81
Query: 393 QCVDCLIMHGADISSKTPSGSSAL 416
            CV  L+  GAD + K P G +AL
Sbjct: 82  SCVKLLLSKGADKTVKGPDGLTAL 105

>pdb|1IHB|A Chain A, Crystal Structure Of P18-Ink4c(Ink6) Length = 162

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 235 NPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECL 294
           NP++ +  G + +H AA  G +  L+ +L+   ADV+I+  E  +  LHLAA+ G++  +
Sbjct: 62  NPDLKDRTGFAVIHDAARAGFLDTLQTLLEF-QADVNIEDNEGNL-PLHLAAKEGHLRVV 119
Query: 295 RILLENHA-NCNERNHKEQIPLHLA 318
             L+++ A N   RNHK      LA
Sbjct: 120 EFLVKHTASNVGHRNHKGDTACDLA 144

>pdb|1BU9|A Chain A, Solution Structure Of P18-Ink4c, 21 Structures Length = 168

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 235 NPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECL 294
           NP++ +  G + +H AA  G +  L+ +L+   ADV+I+  E  +  LHLAA+ G++  +
Sbjct: 62  NPDLKDRTGFAVIHDAARAGFLDTLQTLLEF-QADVNIEDNEGNL-PLHLAAKEGHLRVV 119
Query: 295 RILLENHA-NCNERNHKEQIPLHLA 318
             L+++ A N   RNHK      LA
Sbjct: 120 EFLVKHTASNVGHRNHKGDTACDLA 144

>pdb|1OY3|D Chain D, Crystal Structure Of An IkbbetaNF-Kb P65 Homodimer Complex Length = 282

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 308 NHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASD--CDNRTPLHASLSKNILSVHPLEIL 365
           N+    PLH+A   +  E + +L   G+ +N  +  C  RTPLH ++     SV  LE+L
Sbjct: 155 NYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTC-GRTPLHLAVEAQAASV--LELL 211
Query: 366 LKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGA 403
           LK GA+  AR   G +P+  A L         L  HGA
Sbjct: 212 LKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGA 249

>pdb|1K3Z|D Chain D, X-Ray Crystal Structure Of The IkbbNF-Kb P65 Homodimer Complex Length = 282

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 308 NHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASD--CDNRTPLHASLSKNILSVHPLEIL 365
           N+    PLH+A   +  E + +L   G+ +N  +  C  RTPLH ++     SV  LE+L
Sbjct: 155 NYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTC-GRTPLHLAVEAQAASV--LELL 211
Query: 366 LKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGA 403
           LK GA+  AR   G +P+  A L         L  HGA
Sbjct: 212 LKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGA 249

>pdb|1MX2|A Chain A, Structure Of F71n Mutant Of P18ink4c Length = 168

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 235 NPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECL 294
           NP++ +  G + +H AA  G +  L+ +L+   ADV+I+  E  +  LHLAA+ G++  +
Sbjct: 62  NPDLKDRTGNAVIHDAARAGFLDTLQTLLEF-QADVNIEDNEGNL-PLHLAAKEGHLRVV 119
Query: 295 RILLENHA-NCNERNHKEQIPLHLA 318
             L+++ A N   RNHK      LA
Sbjct: 120 EFLVKHTASNVGHRNHKGDTACDLA 144

>pdb|1MX4|A Chain A, Structure Of P18ink4c (F82q) Length = 168

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 235 NPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECL 294
           NP++ +  G + +H AA  G +  L+ +L+   ADV+I+  E  +  LHLAA+ G++  +
Sbjct: 62  NPDLKDRTGFAVIHDAARAGQLDTLQTLLEF-QADVNIEDNEGNL-PLHLAAKEGHLRVV 119
Query: 295 RILLENHA-NCNERNHKEQIPLHLA 318
             L+++ A N   RNHK      LA
Sbjct: 120 EFLVKHTASNVGHRNHKGDTACDLA 144

>pdb|2ZGG|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 92

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA  G  + +RIL+ N A+   ++     PLHLAA+   +E +++LL  G+ VNA D   
Sbjct: 13  AARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFG 72
Query: 345 RTPLHASL 352
           +T    S+
Sbjct: 73  KTAFDISI 80

>pdb|3AAA|C Chain C, Crystal Structure Of Actin Capping Protein In Complex With V-1 Length = 123

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 333 KGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELS 392
           KG  VN +    R PLH +     L +  LE LL  GA++NA D    +P+  A      
Sbjct: 29  KGEDVNRTLEGGRKPLHYAADCGQLEI--LEFLLLKGADINAPDKHHITPLLSAVYEGHV 86
Query: 393 QCVDCLIMHGADISSKTPSGSSAL 416
            CV  L+  GAD + K P G +A 
Sbjct: 87  SCVKLLLSKGADKTVKGPDGLTAF 110

>pdb|1BD8|A Chain A, Structure Of Cdk Inhibitor P19ink4d Length = 156

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 229 LLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAEN 288
           LL    +PNV +  G SP+H AA  G +  LK +++ G ADV++      +  +HLA + 
Sbjct: 54  LLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHG-ADVNVPDGTGAL-PIHLAVQE 111
Query: 289 GYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEML 330
           G+   +   L   ++ + R+ +   PL LA +  + + +++L
Sbjct: 112 GHTAVVS-FLAAESDLHRRDARGLTPLELALQRGAQDLVDIL 152

>pdb|1BD8|A Chain A, Structure Of Cdk Inhibitor P19ink4d Length = 156

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 365 LLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSI 418
           LLK GA+ N +D  G SP+H AA +     +  L+ HGAD++   P G+ AL I
Sbjct: 54  LLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVN--VPDGTGALPI 105

>pdb|1BI8|B Chain B, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 166

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 229 LLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAEN 288
           LL    +PNV +  G SP+H AA  G +  LK +++ G ADV++      +  +HLA + 
Sbjct: 60  LLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHG-ADVNVPDGTGAL-PIHLAVQE 117
Query: 289 GYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEML 330
           G+   +   L   ++ + R+ +   PL LA +  + + +++L
Sbjct: 118 GHTAVVS-FLAAESDLHRRDARGLTPLELALQRGAQDLVDIL 158

>pdb|1BI8|B Chain B, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 166

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 365 LLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSI 418
           LLK GA+ N +D  G SP+H AA +     +  L+ HGAD++   P G+ AL I
Sbjct: 60  LLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVN--VPDGTGALPI 111

>pdb|3T9K|A Chain A, Crystal Structure Of Acap1 C-portion Mutant S554d Fused With Integrin Beta1 Peptide Length = 390

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 323 SVECMEMLLRKGSQVN--ASDCDNRTPL-HASLSKNILSVHPLEILLKWGANVNARDIFG 379
           S+  M   L  G+ VN      DN TPL  A+ + ++L+    E LL+ GANVN  D  G
Sbjct: 212 SLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLAC---EFLLQNGANVNQADSAG 268
Query: 380 YSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSI 427
             P+H A +   +      +  GAD+ ++   G   L+I M    + I
Sbjct: 269 RGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADI 316

>pdb|4F1P|A Chain A, Crystal Structure Of Mutant S554d For Arfgap And Ank Repeat Domain Of Acap1 Length = 368

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 323 SVECMEMLLRKGSQVN--ASDCDNRTPL-HASLSKNILSVHPLEILLKWGANVNARDIFG 379
           S+  M   L  G+ VN      DN TPL  A+ + ++L+    E LL+ GANVN  D  G
Sbjct: 212 SLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLAC---EFLLQNGANVNQADSAG 268
Query: 380 YSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSI 427
             P+H A +   +      +  GAD+ ++   G   L+I M    + I
Sbjct: 269 RGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADI 316

>pdb|3JUE|A Chain A, Crystal Structure Of Arfgap And Ank Repeat Domain Of Acap1 Length = 368

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 323 SVECMEMLLRKGSQVN--ASDCDNRTPL-HASLSKNILSVHPLEILLKWGANVNARDIFG 379
           S+  M   L  G+ VN      DN TPL  A+ + ++L+    E LL+ GANVN  D  G
Sbjct: 212 SLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLAC---EFLLQNGANVNQADSAG 268
Query: 380 YSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSI 427
             P+H A +   +      +  GAD+ ++   G   L+I M    + I
Sbjct: 269 RGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADI 316

>pdb|1YMP|A Chain A, The Crystal Structure Of A Partial Mouse Notch-1 Ankyrin Domain: Repeats 4 Through 7 Preserve An Ankyrin Fold Length = 135

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 37/105 (35%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Query: 243 GVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHA 302
           G +PL +AA   L   L+ +++S  ADV+    +   +ALH AA    V+   +LL+N A
Sbjct: 15  GTTPLILAARLALEGMLEDLINS-HADVN-AVDDLGKSALHWAAAVNNVDAAVVLLKNGA 72
Query: 303 NCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTP 347
           N + +N+KE+ PL LAA+  S E  ++LL   +  + +D  +R P
Sbjct: 73  NKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLP 117

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	854
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-73
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	8e-71
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	7e-60
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-52
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	8e-66
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-54
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	2e-54
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	2e-48
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	2e-26
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	1e-63
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	5e-61
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	7e-42
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	5e-27
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	8e-62
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-56
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-60
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	1e-49
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	1e-43
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	3e-59
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	3e-57
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	3e-38
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-24
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	7e-59
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-57
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	5e-55
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-42
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-34
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	5e-34
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	7e-58
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	6e-38
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-34
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	5e-20
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-11
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	6e-56
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	8e-50
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	4e-20
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	6e-15
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-55
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-49
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	8e-44
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	1e-42
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	1e-22
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	4e-54
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-42
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	1e-38
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	3e-26
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	3e-53
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	8e-51
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-44
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-40
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	5e-22
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	3e-53
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	7e-52
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-47
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-31
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-31
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	5e-53
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-47
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-39
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-36
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	7e-52
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-49
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	4e-38
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	4e-13
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-50
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-47
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-43
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	8e-35
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	5e-49
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	5e-41
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	3e-29
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	5e-11
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-45
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	4e-44
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-36
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-34
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	4e-19
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-45
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-41
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-37
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-31
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	3e-24
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	5e-10
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	6e-45
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	2e-42
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	2e-30
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	3e-20
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	7e-43
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	2e-37
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	4e-23
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-42
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	8e-38
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-37
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	9e-36
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-13
2rfa_A	232	Transient receptor potential cation channel subfa	1e-41
2rfa_A	232	Transient receptor potential cation channel subfa	1e-35
2rfa_A	232	Transient receptor potential cation channel subfa	3e-29
2rfa_A	232	Transient receptor potential cation channel subfa	7e-24
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-40
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-39
3v30_A	172	DNA-binding protein rfxank; structural genomics co	5e-38
3v30_A	172	DNA-binding protein rfxank; structural genomics co	4e-34
3v30_A	172	DNA-binding protein rfxank; structural genomics co	3e-32
3hra_A	201	Ankyrin repeat family protein; structural protein;	3e-39
3hra_A	201	Ankyrin repeat family protein; structural protein;	3e-37
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-28
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-27
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	6e-39
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	5e-35
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	8e-34
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	2e-32
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	5e-31
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	3e-19
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	6e-39
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	4e-37
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	5e-31
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	1e-09
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	7e-39
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	3e-38
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	5e-37
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	9e-36
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	7e-18
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-37
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	5e-34
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-33
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	9e-28
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-36
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	2e-36
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-35
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-09
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	4e-36
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-29
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	4e-19
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-13
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	4e-10
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-08
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	7e-36
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-31
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	5e-31
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-22
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-15
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	5e-05
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-35
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-34
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	4e-34
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	7e-32
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	3e-35
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	8e-32
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	5e-22
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	9e-13
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	5e-35
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	2e-29
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	8e-28
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-34
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	5e-31
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-27
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	5e-24
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-14
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-07
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-33
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	3e-30
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	4e-28
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	5e-27
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	8e-26
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-16
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-10
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	4e-07
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-33
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	3e-33
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	3e-33
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-32
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	9e-27
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-11
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	8e-31
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	1e-25
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	9e-23
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	3e-20
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	1e-11
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-30
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	7e-27
2pnn_A	273	Transient receptor potential cation channel subfa	2e-29
2pnn_A	273	Transient receptor potential cation channel subfa	3e-27
2pnn_A	273	Transient receptor potential cation channel subfa	6e-27
2pnn_A	273	Transient receptor potential cation channel subfa	9e-18
2pnn_A	273	Transient receptor potential cation channel subfa	9e-12
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	4e-29
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-26
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	2e-23
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	3e-23
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	5e-19
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	9e-29
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	1e-24
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-23
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	5e-21
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-27
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	1e-25
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	1e-23
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	6e-21
3jxi_A	260	Vanilloid receptor-related osmotically activated p	2e-27
3jxi_A	260	Vanilloid receptor-related osmotically activated p	1e-24
3jxi_A	260	Vanilloid receptor-related osmotically activated p	9e-23
3jxi_A	260	Vanilloid receptor-related osmotically activated p	8e-19
3jxi_A	260	Vanilloid receptor-related osmotically activated p	3e-16
2etb_A	256	Transient receptor potential cation channel subfam	2e-26
2etb_A	256	Transient receptor potential cation channel subfam	5e-23
2etb_A	256	Transient receptor potential cation channel subfam	2e-07
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	2e-23
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	2e-19
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	1e-10
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-20
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	5e-19
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	5e-18
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	3e-12
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	4e-12
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	1e-11
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	3e-18
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	7e-18
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	8e-18
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	6e-16
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	5e-14
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-15
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	2e-13
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	2e-10
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	5e-10
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	3e-09
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	1e-08
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-13
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	6e-12
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	1e-11
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	1e-10
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	4e-13
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	2e-12
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	3e-11
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	4e-09
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	2e-08
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	4e-11
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	1e-10
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	1e-07
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	2e-07

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  246 bits (631), Expect = 1e-73
 Identities = 95/307 (30%), Positives = 151/307 (49%), Gaps = 16/307 (5%)

Query: 123 TALLWCVFVKREDLLDALHQLGADL---SNDKYGALHLAAFNGSIKGCSWLMLHGHDIN- 178
           T L     +   +++  L +  A+    +   +  LH+AA  G ++    L+        
Sbjct: 82  TPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQAC 141

Query: 179 FTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE------TIVHSAVSTNAVDCVQLLLSL 232
            TK  +TPLH A     V  A+ L++  AH +       T +H AV  N +D V+LLL  
Sbjct: 142 MTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPR 201

Query: 233 QINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVE 292
             +P+     G +PLHIAA +  +   +++L  G    + ++ +   T LHLAA+ G+ E
Sbjct: 202 GGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYG-GSANAESVQGV-TPLHLAAQEGHAE 259

Query: 293 CLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLH-AS 351
            + +LL   AN N  N     PLHL A+   V   ++L++ G  V+A+     TPLH AS
Sbjct: 260 MVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVAS 319

Query: 352 LSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPS 411
              NI  V   + LL+  A+VNA+   GYSP+H AA    +  V  L+ +GA  +  +  
Sbjct: 320 HYGNIKLV---KFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSD 376

Query: 412 GSSALSI 418
           G++ L+I
Sbjct: 377 GTTPLAI 383

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  239 bits (612), Expect = 8e-71
 Identities = 85/283 (30%), Positives = 138/283 (48%), Gaps = 14/283 (4%)

Query: 144 GADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHGHDINF-TKDSYTPLHFAVLGNYVDCA 199
           G       + G   LH+A+F G +     L+  G   N       TPLH A    + + A
Sbjct: 4   GISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVA 63

Query: 200 KFLIKNKAHIHE------TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADR 253
           K+L++NKA ++       T +H A      + V+LLL    NPN+    G +PLHIAA  
Sbjct: 64  KYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAARE 123

Query: 254 GLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQI 313
           G +  + A+L+   A     TK+   T LH+AA+ G V    +LLE  A+ N        
Sbjct: 124 GHVETVLALLEKE-ASQACMTKKGF-TPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLT 181

Query: 314 PLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVN 373
           PLH+A    +++ +++LL +G   ++   +  TPLH +  +N + V     LL++G + N
Sbjct: 182 PLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEV--ARSLLQYGGSAN 239

Query: 374 ARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSAL 416
           A  + G +P+H+AA    ++ V  L+   A+ +    SG + L
Sbjct: 240 AESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPL 282

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  209 bits (534), Expect = 7e-60
 Identities = 74/298 (24%), Positives = 124/298 (41%), Gaps = 22/298 (7%)

Query: 123 TALLWCVFVKREDLLDALHQLGADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHGHDINF 179
           T L       +  + + L +  A   +  K G   LH+A  + ++     L+  G   + 
Sbjct: 148 TPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHS 207

Query: 180 T-KDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE------TIVHSAVSTNAVDCVQLLLSL 232
              + YTPLH A   N V+ A+ L++     +       T +H A      + V LLLS 
Sbjct: 208 PAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSK 267

Query: 233 QINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVE 292
           Q N N+ N  G++PLH+ A  G +     ++  G   VD  T+    T LH+A+  G ++
Sbjct: 268 QANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHG-VMVDATTRMGY-TPLHVASHYGNIK 325

Query: 293 CLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLH-AS 351
            ++ LL++ A+ N +      PLH AA+    + + +LL+ G+  N    D  TPL  A 
Sbjct: 326 LVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAK 385

Query: 352 LSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKT 409
               I     L+++    + V   D    S             VD ++    D   + 
Sbjct: 386 RLGYISVTDVLKVVTDETSFVLVSDKHRMSFPET---------VDEILDVSEDEGEEL 434

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  188 bits (479), Expect = 3e-52
 Identities = 71/247 (28%), Positives = 104/247 (42%), Gaps = 32/247 (12%)

Query: 173 HGHDINF-TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLS 231
            G       +   TPLH A    ++   K L++  A                        
Sbjct: 3   PGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGA------------------------ 38

Query: 232 LQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYV 291
              +PNV N K  +PLH+AA  G     K +L +  A V+ K K+ + T LH AA  G+ 
Sbjct: 39  ---SPNVSNVKVETPLHMAARAGHTEVAKYLLQNK-AKVNAKAKDDQ-TPLHCAARIGHT 93

Query: 292 ECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHAS 351
             +++LLEN+AN N        PLH+AA+   VE +  LL K +          TPLH +
Sbjct: 94  NMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVA 153

Query: 352 LSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPS 411
                + V   E+LL+  A+ NA    G +P+H+A        V  L+  G    S   +
Sbjct: 154 AKYGKVRV--AELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWN 211

Query: 412 GSSALSI 418
           G + L I
Sbjct: 212 GYTPLHI 218

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  222 bits (569), Expect = 8e-66
 Identities = 75/324 (23%), Positives = 134/324 (41%), Gaps = 43/324 (13%)

Query: 120 EKTTALLWCVFVKREDLLDALHQLGADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHGHD 176
           +K   L        E L+  L  L  +  ++D      LHLAA    ++    L+ HG D
Sbjct: 24  KKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD 83

Query: 177 INF-TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE------TIVHSAVSTNAVDCVQLL 229
           ++   K    PLH A    + +  + L+K+ A ++       T +H A S N V+   LL
Sbjct: 84  VHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLL 143

Query: 230 LSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGM--------------------AD 269
           LS   +P ++N  G S + +A    L   L                              
Sbjct: 144 LSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEII 203

Query: 270 VDIKTKERRVTALHLAAENGY---VECLRILLENHANCNERNHKEQIPLHLAAKCQSVEC 326
              + +    TALH A  + +    +   +LL   AN NE+N     PLH+AA+    + 
Sbjct: 204 NFKQPQSHE-TALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDV 262

Query: 327 MEMLLRKGSQVNASDCDNRTPLH-ASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHI 385
           ME+L + G+++NA D   +T LH A+L+ ++ +     +LL +G++ +   + G++   +
Sbjct: 263 MEVLHKHGAKMNALDSLGQTALHRAALAGHLQTC---RLLLSYGSDPSIISLQGFTAAQM 319

Query: 386 AALSELSQCVDCLIMHGADISSKT 409
                  + V  ++     + +  
Sbjct: 320 GN-----EAVQQILSESTPMRTSD 338

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  191 bits (489), Expect = 1e-54
 Identities = 66/292 (22%), Positives = 112/292 (38%), Gaps = 28/292 (9%)

Query: 139 ALHQL--GADLSN-DKYG---ALHLAAFNGSIKGCSWLMLHGHDINF-TKDSYTPLHFAV 191
           AL      A      +Y     L  A      K  + L     + +       TPLH A 
Sbjct: 7   ALDLADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAA 66

Query: 192 LGNYVDCAKFLIKNKAHIHE------TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVS 245
             N V   + L+++ A +H         +H+A S    +  +LLL      N ++    +
Sbjct: 67  GYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFT 126

Query: 246 PLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCN 305
           PLH AA +  +     +L  G AD  +     + +A+ +A      E L    + H+   
Sbjct: 127 PLHEAASKNRVEVCSLLLSHG-ADPTLVNCHGK-SAVDMAPTPELRERLTYEFKGHS--- 181

Query: 306 ERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLH-ASLSKNILSVHPLEI 364
                    L  A +    + ++  L            + T LH A  S +       E+
Sbjct: 182 --------LLQAAREADLAK-VKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAEL 232

Query: 365 LLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSAL 416
           LL+ GANVN ++    +P+H+AA    +  ++ L  HGA +++    G +AL
Sbjct: 233 LLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTAL 284

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  191 bits (488), Expect = 2e-54
 Identities = 51/251 (20%), Positives = 94/251 (37%), Gaps = 24/251 (9%)

Query: 144 GADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHGHDINF-TKDSYTPLHFAVLGNYVDCA 199
           GA + + D +    LH AA    ++ CS L+ HG D         + +  A      +  
Sbjct: 114 GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERL 173

Query: 200 KFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCL 259
            +  K  + +       A     +  V+  L+L+I          + LH A         
Sbjct: 174 TYEFKGHSLLQ------AAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRK 227

Query: 260 ---KAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLH 316
              + +L  G A+V+ K K+   T LH+AAE  + + + +L ++ A  N  +   Q  LH
Sbjct: 228 QVAELLLRKG-ANVNEKNKDFM-TPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALH 285

Query: 317 LAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARD 376
            AA    ++   +LL  GS  +       T      ++ +      + +L     +   D
Sbjct: 286 RAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMG-NEAV------QQILSESTPMRTSD 338

Query: 377 IFGYSPIHIAA 387
           +     +  A+
Sbjct: 339 VDY--RLLEAS 347

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  174 bits (444), Expect = 2e-48
 Identities = 58/291 (19%), Positives = 97/291 (33%), Gaps = 66/291 (22%)

Query: 151 KYG--ALHLAAFNGSIKGCSWLMLHGHDINFTKDS-YTPLHFAVLGNYVDCAKFLIKNKA 207
           ++G  AL LA                     T +     L  A                 
Sbjct: 2   EFGKSALDLAD-------------PSAKAVLTGEYKKDELLEA----------------- 31

Query: 208 HIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGM 267
                    A S N    + LL  L +N +  + +  +PLH+AA    +  ++ +L  G 
Sbjct: 32  ---------ARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHG- 81

Query: 268 ADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECM 327
           ADV  K K      LH A   G+ E   +LL++ A  N  +  +  PLH AA    VE  
Sbjct: 82  ADVHAKDKGGL-VPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVC 140

Query: 328 EMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEI-------------------LLKW 368
            +LL  G+     +C  ++ +  + +  +      E                     L  
Sbjct: 141 SLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLAL 200

Query: 369 GANVNARDIFGYSPIHIAALS---ELSQCVDCLIMHGADISSKTPSGSSAL 416
                 +     + +H A  S   +  Q  + L+  GA+++ K     + L
Sbjct: 201 EIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPL 251

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  110 bits (278), Expect = 2e-26
 Identities = 35/182 (19%), Positives = 67/182 (36%), Gaps = 21/182 (11%)

Query: 120 EKTTALLWCVFVKREDLLDALHQLGADLSNDKYG--ALHLAAFNGSIKG---CSWLMLHG 174
           +  + L          +   L     +    +    ALH A  +   K       L+  G
Sbjct: 178 KGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKG 237

Query: 175 HDINF-TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE------TIVHSAVSTNAVDCVQ 227
            ++N   KD  TPLH A    + D  + L K+ A ++       T +H A     +   +
Sbjct: 238 ANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCR 297

Query: 228 LLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAE 287
           LLLS   +P++++ +G +   +  +      ++ IL      +     +     L  A++
Sbjct: 298 LLLSYGSDPSIISLQGFTAAQMGNE-----AVQQILSES-TPMRTSDVD---YRLLEASK 348

Query: 288 NG 289
            G
Sbjct: 349 AG 350

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  209 bits (535), Expect = 8e-62
 Identities = 60/265 (22%), Positives = 107/265 (40%), Gaps = 23/265 (8%)

Query: 154 ALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE-- 211
                 F G       L+ +    +     ++P+H A +  +    + LI     ++   
Sbjct: 36  PAGPRDFPGIR-----LLSNPLMGD-AVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIIT 89

Query: 212 ----TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGM 267
               + +H A     + CV++LL      N +     +PL  A   G   C+  +L  G 
Sbjct: 90  ADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHG- 148

Query: 268 ADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECM 327
           A V  ++     + +H AA  G+VEC+  L+    N + +      PL+LA + Q   C+
Sbjct: 149 ASVQPESDLA--SPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACV 206

Query: 328 EMLLRKGSQVNASDCDNRTPLH-ASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIA 386
           + LL  G+ VN       +PLH    + +        +L+ +GA+  A++  G  P+ + 
Sbjct: 207 KKLLESGADVNQ-GKGQDSPLHAVVRTASEELA---CLLMDFGADTQAKNAEGKRPVELV 262

Query: 387 AL-SELSQCVDCLIMHGADISSKTP 410
              S L+Q    L   GA +    P
Sbjct: 263 PPESPLAQL--FLEREGASLPKPKP 285

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  194 bits (496), Expect = 2e-56
 Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 13/268 (4%)

Query: 157 LAAFNGSIKGCSWLMLHGHDIN------FTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIH 210
           + + +      S L+  G  +          D   P            +  L+ +     
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVS-D 59

Query: 211 ETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADV 270
            + +H A        ++ L+S     N++    VSPLH A   G +SC+K +L  G A V
Sbjct: 60  WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHG-AQV 118

Query: 271 DIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEML 330
           +  T +   T L  A  +G  +C+ +LL++ A+    +     P+H AA+   VEC+  L
Sbjct: 119 NGVTADWH-TPLFNACVSGSWDCVNLLLQHGASVQPESDL-ASPIHEAARRGHVECVNSL 176

Query: 331 LRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSE 390
           +  G  ++       TPL+ +      +   ++ LL+ GA+VN       SP+H    + 
Sbjct: 177 IAYGGNIDHKISHLGTPLYLACENQQRAC--VKKLLESGADVNQGK-GQDSPLHAVVRTA 233

Query: 391 LSQCVDCLIMHGADISSKTPSGSSALSI 418
             +    L+  GAD  +K   G   + +
Sbjct: 234 SEELACLLMDFGADTQAKNAEGKRPVEL 261

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  205 bits (524), Expect = 2e-60
 Identities = 70/284 (24%), Positives = 117/284 (41%), Gaps = 28/284 (9%)

Query: 150 DKYG--ALHLAAFNGSIKGCSWLMLHGHDINFTKDSY--TPLHFAVLGNYVDCAKFLIKN 205
                  L  A  N  +     L+  G ++NF ++    TPLH AV  +  D  + L+++
Sbjct: 2   AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH 61

Query: 206 KAHIHE------TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCL 259
            A          T    A    +V  ++L LS   + N  +  G +    AA  G +  L
Sbjct: 62  GADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKAL 121

Query: 260 KAILDSGMADVDIKTKERRV---------TALHLAAENGYVECLRILLENH-ANCNERNH 309
           K +   G A+V+++ K +           TAL  AAE G+VE L+ILL+   A+ N  ++
Sbjct: 122 KFLYKRG-ANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDN 180

Query: 310 KEQIPLHLAAKCQSVEC----MEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEIL 365
             +  L  A              +LL  G+ VN      +TPL  ++ K  L +  ++ L
Sbjct: 181 MGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGL--VQRL 238

Query: 366 L-KWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSK 408
           L +    +N  D  G + + +A   +L +  + L   GA     
Sbjct: 239 LEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG 282

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  175 bits (447), Expect = 1e-49
 Identities = 67/281 (23%), Positives = 117/281 (41%), Gaps = 29/281 (10%)

Query: 123 TALLWCVFVKREDLLDALHQLGADL-SNDKYG---ALHLAAFNGSIKGCSWLMLHGHDIN 178
             L+  V  +  DL+  L + GA++   ++ G    LH A           L+ HG D  
Sbjct: 7   HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV 66

Query: 179 FT-KDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE------TIVHSAVSTNAVDCVQLLLS 231
              K+  TP   A +   V   K  +   A ++E      T    A     V  ++ L  
Sbjct: 67  LRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYK 126

Query: 232 LQINPNVLNN----------KGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTA 281
              N N+              G + L  AA++G +  LK +LD   ADV+      R  A
Sbjct: 127 RGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGR-NA 185

Query: 282 LHLAAENGYVECL----RILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLL-RKGSQ 336
           L  A  +     +     +LL++ A+ N R  + + PL LA + + +  ++ LL ++  +
Sbjct: 186 LIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE 245

Query: 337 VNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDI 377
           +N +D D +T L  ++   +  +   E+L K GA+ +  D+
Sbjct: 246 INDTDSDGKTALLLAVELKLKKI--AELLCKRGASTDCGDL 284

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  158 bits (403), Expect = 1e-43
 Identities = 60/254 (23%), Positives = 99/254 (38%), Gaps = 45/254 (17%)

Query: 180 TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVL 239
             +    L  AV    VD  + L++  A++           N  +               
Sbjct: 2   AVEDNHLLIKAVQNEDVDLVQQLLEGGANV-----------NFQE--------------- 35

Query: 240 NNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLE 299
              G +PLH A        ++ +L  G AD  ++ K    T   LAA  G V+ L++ L 
Sbjct: 36  EEGGWTPLHNAVQMSREDIVELLLRHG-ADPVLRKKNGA-TPFLLAAIAGSVKLLKLFLS 93

Query: 300 NHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN----------RTPLH 349
             A+ NE +         AA    V+ ++ L ++G+ VN                 T L 
Sbjct: 94  KGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALM 153

Query: 350 ASLSKNILSVHPLEILL-KWGANVNARDIFGYSPIHIAA----LSELSQCVDCLIMHGAD 404
            +  K  + V  L+ILL + GA+VNA D  G + +  A      S++      L+ HGAD
Sbjct: 154 DAAEKGHVEV--LKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD 211

Query: 405 ISSKTPSGSSALSI 418
           ++ +   G + L +
Sbjct: 212 VNVRGERGKTPLIL 225

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  203 bits (518), Expect = 3e-59
 Identities = 66/304 (21%), Positives = 117/304 (38%), Gaps = 19/304 (6%)

Query: 115 KASQAEKTTALLWCVFVKREDLLDALHQLGADL-SNDKYG-ALHLAAFNGSIKGCSWLML 172
           K + A++        ++  E  L+               G     A  +G  +    L+ 
Sbjct: 2   KMADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLE 61

Query: 173 HGHDINF-TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE------TIVHSAVSTNAVDC 225
            G DIN+   D  T LH A + + VD  KFL++N A+I++        +H+A S   +D 
Sbjct: 62  RGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDI 121

Query: 226 VQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLA 285
            + L+S   +   +N++G +PL IA +  +   L+  ++    D++         A    
Sbjct: 122 AEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIE--------AARKEE 173

Query: 286 AENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNR 345
                 +  + L   H N           LH+AA     E +++L++    VN  D D  
Sbjct: 174 ERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGW 233

Query: 346 TPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADI 405
           TPLHA+            IL++   ++ A +  G +   +A    L    +         
Sbjct: 234 TPLHAAAHWGKEEA--CRILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQKKQNLLH 291

Query: 406 SSKT 409
           S K 
Sbjct: 292 SEKR 295

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  197 bits (504), Expect = 3e-57
 Identities = 61/302 (20%), Positives = 111/302 (36%), Gaps = 20/302 (6%)

Query: 150 DKYG--ALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKA 207
           D        L  + GS       ++         D       A      +    L++  A
Sbjct: 5   DAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGA 64

Query: 208 HIHE------TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKA 261
            I+       T +H A   + VD V+ L+    N N  +N+G  PLH AA  G +   + 
Sbjct: 65  DINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEY 124

Query: 262 ILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENH-ANCNERNHKEQIPLHLAAK 320
           ++  G A V     E   T L +A E    E L+  +     +      +E+  +   A+
Sbjct: 125 LISQG-AHVGAVNSEGD-TPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDAR 182

Query: 321 CQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGY 380
                  + L               T LH + +K    V  L++L++   +VN +D  G+
Sbjct: 183 -------QWLNSGHINDVRHAKSGGTALHVAAAKGYTEV--LKLLIQARYDVNIKDYDGW 233

Query: 381 SPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISL 440
           +P+H AA     +    L+ +  D+ +    G +A  +   +    +  ++KK +   S 
Sbjct: 234 TPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQKKQNLLHSE 293

Query: 441 QD 442
           + 
Sbjct: 294 KR 295

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  143 bits (364), Expect = 3e-38
 Identities = 45/217 (20%), Positives = 88/217 (40%), Gaps = 13/217 (5%)

Query: 203 IKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAI 262
           +K      +          +   ++  +  +    V  + G      A   G    +  +
Sbjct: 1   MKMADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGA-VFLAACSSGDTEEVLRL 59

Query: 263 LDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQ 322
           L+ G AD++    +   TALH A  +  V+ ++ L+EN AN N+ +++  IPLH AA C 
Sbjct: 60  LERG-ADINYANVDGL-TALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCG 117

Query: 323 SVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILL-KWGANVNARDIFGYS 381
            ++  E L+ +G+ V A + +  TPL  +  + +  +  L+  + + G ++ A       
Sbjct: 118 YLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEEL--LQNEVNRQGVDIEAARKEEER 175

Query: 382 PIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSI 418
            +   A          L     +      SG +AL +
Sbjct: 176 IMLRDA-------RQWLNSGHINDVRHAKSGGTALHV 205

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  103 bits (260), Expect = 2e-24
 Identities = 31/178 (17%), Positives = 67/178 (37%), Gaps = 18/178 (10%)

Query: 144 GADL-SNDKYG--ALHLAAFNGSIKGCSWLML-HGHDINFTKDSYTPLHFAVLGNYVDCA 199
           GA + + +  G   L +A      +     +   G DI                   D  
Sbjct: 129 GAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIE------AARKEEERIMLRDAR 182

Query: 200 KFLIKNKAHIHE------TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADR 253
           ++L     +         T +H A +    + ++LL+  + + N+ +  G +PLH AA  
Sbjct: 183 QWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHW 242

Query: 254 GLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKE 311
           G     + ++++   D++   K  + TA  +A E+       +  + +   +E+  K+
Sbjct: 243 GKEEACRILVENL-CDMEAVNKVGQ-TAFDVADEDILGYLEELQKKQNLLHSEKREKK 298

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  204 bits (521), Expect = 7e-59
 Identities = 56/319 (17%), Positives = 106/319 (33%), Gaps = 34/319 (10%)

Query: 123 TALLWCVFVKREDLLDALHQLGADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHGHDINF 179
             +       + D +  L + G      +++G  ALHLA   G +    +L   G   + 
Sbjct: 22  EKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHS- 80

Query: 180 TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVL 239
                 P+H AV+ N  D    L++      +         +  +        +I  +V 
Sbjct: 81  LWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVN------EIGSHVK 134

Query: 240 NNKGVSPLHIAADRGL--ISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRIL 297
           + KG + LH     G   +  +K ++  G A    K K    T L  A E    E L ++
Sbjct: 135 HCKGQTALHWCVGLGPEYLEMIKILVQLG-ASPTAKDKADE-TPLMRAMEFRNREALDLM 192

Query: 298 LE-----NHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASL 352
           ++     +    +  N +    LH A      +     +  G  VN  D ++  PL+ S+
Sbjct: 193 MDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSV 252

Query: 353 SKNILSVHPLEILL-------------KWGANVNARDIFGYSPIHIAALSELSQCVDCLI 399
              ++ +   + LL               G  V    +     +  AA     + +  L 
Sbjct: 253 RAAMVLL--TKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQ 310

Query: 400 MHGADISSKTPSGSSALSI 418
               ++     +G+     
Sbjct: 311 EKLDEVVRSLNTGAGGAVK 329

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  199 bits (509), Expect = 3e-57
 Identities = 48/317 (15%), Positives = 104/317 (32%), Gaps = 30/317 (9%)

Query: 123 TALLWCVFVKREDLLDALHQLGADLSNDKYG--ALHLAAFNGSIKGCSWLMLHGHDINFT 180
           TAL         D    L  +G    +  +G   +HLA           L+    +    
Sbjct: 55  TALHLACKFGCVDTAKYLASVGEVH-SLWHGQKPIHLAVMANKTDLVVALVEGAKERG-- 111

Query: 181 KDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVST--NAVDCVQLLLSLQINPNV 238
                P       +  +  +     K    +T +H  V      ++ +++L+ L  +P  
Sbjct: 112 ---QMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTA 168

Query: 239 LNNKGVSPLHIAADRGLISCLKAILDSGM----ADVDIKTKERRVTALHLAAENGYVECL 294
            +    +PL  A +      L  ++D+        +D   K+   + LH A    + +  
Sbjct: 169 KDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGN-SHLHWAILINWEDVA 227

Query: 295 RILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRK-------------GSQVNASD 341
              +E   + N  +++  +PL+L+ +   V   + LL+K             G+ V    
Sbjct: 228 MRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDR 287

Query: 342 CDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMH 401
                 + A+   +   V  L++L +    V      G                   +  
Sbjct: 288 VVWLDFVPAAADPSKQEV--LQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLAP 345

Query: 402 GADISSKTPSGSSALSI 418
            A + +++ S + + ++
Sbjct: 346 SAPVRTRSRSRARSSAV 362

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  193 bits (493), Expect = 5e-55
 Identities = 50/287 (17%), Positives = 106/287 (36%), Gaps = 30/287 (10%)

Query: 150 DKYG--ALHLAAFNGSIKGCSWLMLHGHDINF-TKDSYTPLHFAVLGNYVDCAKFLIKNK 206
           D      +H+AA  G       L+  G       +   T LH A     VD AK+L    
Sbjct: 17  DDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVG 76

Query: 207 AHIHE----TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAI 262
                      +H AV  N  D V  L+           +G  P  +  +       +  
Sbjct: 77  EVHSLWHGQKPIHLAVMANKTDLVVALVEGA------KERGQMPESLLNECDEREVNEI- 129

Query: 263 LDSGMADVDIKTKERRVTALHLAAENG--YVECLRILLENHANCNERNHKEQIPLHLAAK 320
                    +K  + + TALH     G  Y+E ++IL++  A+   ++  ++ PL  A +
Sbjct: 130 ------GSHVKHCKGQ-TALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAME 182

Query: 321 CQSVECMEMLL-----RKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNAR 375
            ++ E +++++     +   +++ ++    + LH ++  N   V      ++ G +VN  
Sbjct: 183 FRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDV--AMRFVEMGIDVNME 240

Query: 376 DIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRN 422
           D     P++++  + +      L+        +     +  +++   
Sbjct: 241 DNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDR 287

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  158 bits (401), Expect = 1e-42
 Identities = 41/272 (15%), Positives = 86/272 (31%), Gaps = 62/272 (22%)

Query: 176 DINF-TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQI 234
           +      ++   +H A      D  + LI+                              
Sbjct: 12  NRIKSDDENMEKIHVAARKGQTDEVRRLIETGV--------------------------- 44

Query: 235 NPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECL 294
           +P + N  G + LH+A   G +   K +   G     +   +     +HLA      + +
Sbjct: 45  SPTIQNRFGCTALHLACKFGCVDTAKYLASVG-EVHSLWHGQ---KPIHLAVMANKTDLV 100

Query: 295 RILLENHANCN--------ERNHKE-------------QIPLHLAAKC--QSVECMEMLL 331
             L+E              E + +E             Q  LH       + +E +++L+
Sbjct: 101 VALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILV 160

Query: 332 RKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGA-----NVNARDIFGYSPIHIA 386
           + G+   A D  + TPL  ++         L++++          ++  +  G S +H A
Sbjct: 161 QLGASPTAKDKADETPLMRAMEFRNREA--LDLMMDTVPSKSSLRLDYANKQGNSHLHWA 218

Query: 387 ALSELSQCVDCLIMHGADISSKTPSGSSALSI 418
            L          +  G D++ +    +  L +
Sbjct: 219 ILINWEDVAMRFVEMGIDVNMEDNEHTVPLYL 250

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  134 bits (339), Expect = 2e-34
 Identities = 37/226 (16%), Positives = 72/226 (31%), Gaps = 32/226 (14%)

Query: 123 TALLWCVFV--KREDLLDALHQLGADL-SNDKYG--ALHLAAFNGSIKGCSWLM-----L 172
           TAL WCV +  +  +++  L QLGA   + DK     L  A    + +    +M      
Sbjct: 140 TALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSK 199

Query: 173 HGHDINF-TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE------TIVHSAVSTNAVDC 225
               +++  K   + LH+A+L N+ D A   ++    ++         ++ +V    V  
Sbjct: 200 SSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLL 259

Query: 226 VQLLLSLQIN-------------PNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDI 272
            + LL                          +  +  AAD      L+ + +    +V  
Sbjct: 260 TKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKL-DEVVR 318

Query: 273 KTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLA 318
                         +       R+ L   A    R+        ++
Sbjct: 319 SLNTGA-GGAVKRKKKAAPAVKRMKLAPSAPVRTRSRSRARSSAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  133 bits (337), Expect = 5e-34
 Identities = 32/194 (16%), Positives = 73/194 (37%), Gaps = 20/194 (10%)

Query: 227 QLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAA 286
            +    ++N    +++ +  +H+AA +G    ++ ++++G     I+ +    TALHLA 
Sbjct: 4   SMTDFPKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETG-VSPTIQNRFGC-TALHLAC 61

Query: 287 ENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRT 346
           + G V+  + L       +  +   Q P+HLA      + +  L+             + 
Sbjct: 62  KFGCVDTAKYLASVGEVHSLWH--GQKPIHLAVMANKTDLVVALVEGA------KERGQM 113

Query: 347 PLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAAL--SELSQCVDCLIMHGAD 404
           P       +   V+            + +   G + +H       E  + +  L+  GA 
Sbjct: 114 PESLLNECDEREVN--------EIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS 165

Query: 405 ISSKTPSGSSALSI 418
            ++K  +  + L  
Sbjct: 166 PTAKDKADETPLMR 179

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  198 bits (506), Expect = 7e-58
 Identities = 53/265 (20%), Positives = 93/265 (35%), Gaps = 31/265 (11%)

Query: 150 DKYG--ALHLAAFNGSIKGCSWLMLHGHDINF----TKDSYTPLHFAVLGNYVDCAKFLI 203
            + G  ALHLA  +       +L+       +         T LH A +       + L 
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65

Query: 204 KNKAHIHE------TIVHSAVSTNAVDCVQLLLSLQINPNVLNN-------------KGV 244
              A +        T +H A    A  C  +LL  + +     +                
Sbjct: 66  AAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSH 125

Query: 245 SPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANC 304
           +P  + +     +  +   +     ++ +  +   T LH+A  +   E +R+L +  A+ 
Sbjct: 126 APAAVDSQPNPENEEEPRDEDWRLQLEAENYDGH-TPLHVAVIHKDAEMVRLLRDAGADL 184

Query: 305 NERNHKE-QIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLH-ASLSKNILSVHPL 362
           N+      + PLHLA + Q+   +E+LL+ G+   A     RTPL  A L  N +     
Sbjct: 185 NKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILA--- 241

Query: 363 EILLKWGANVNARDIFGYSPIHIAA 387
            +L   GA          SP   + 
Sbjct: 242 RLLRAHGAPEPEDGGDKLSPCSSSG 266

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  142 bits (360), Expect = 6e-38
 Identities = 40/196 (20%), Positives = 69/196 (35%), Gaps = 18/196 (9%)

Query: 237 NVLNNKGVSPLHIAADRGLISCLKAILDSG--MADVDIKTKERRVTALHLAAENGYVECL 294
             +   G + LH+A        L  +L        +D++    + TALHLAA  G    +
Sbjct: 3   GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQ-TALHLAAILGEASTV 61

Query: 295 RILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSK 354
             L    A            LHLA + ++  C  +LL+          D         + 
Sbjct: 62  EKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTP 121

Query: 355 NILSVHPL-------------EILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMH 401
           +     P                   W   + A +  G++P+H+A + + ++ V  L   
Sbjct: 122 DTS-HAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDA 180

Query: 402 GADISSKTP-SGSSAL 416
           GAD++   P  G + L
Sbjct: 181 GADLNKPEPTCGRTPL 196

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  132 bits (334), Expect = 2e-34
 Identities = 43/237 (18%), Positives = 74/237 (31%), Gaps = 27/237 (11%)

Query: 123 TALLWCVFVKREDLLDALHQLGADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHGHDIN- 178
           TAL     +     ++ L+  GA +   ++ G  ALHLA    +      L+        
Sbjct: 47  TALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPR 106

Query: 179 -------------FTKDSYTPLHF-AVLGNYVDCAKFLIKNKAHIHE------TIVHSAV 218
                            S+ P    +      +        +  +        T +H AV
Sbjct: 107 DASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAV 166

Query: 219 STNAVDCVQLLLSLQINPNVL-NNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKER 277
                + V+LL     + N      G +PLH+A +    S L+ +L +G AD   +    
Sbjct: 167 IHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAG-ADPTARMYGG 225

Query: 278 RVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKG 334
           R T L  A         R+L  + A   E    +  P   +      +  +      
Sbjct: 226 R-TPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDSDNRDEGDEYD 281

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 90.3 bits (225), Expect = 5e-20
 Identities = 22/116 (18%), Positives = 36/116 (31%), Gaps = 5/116 (4%)

Query: 305 NERNHKEQIPLHLAAKCQSVECMEMLLRKG---SQVNASDCDNRTPLHASLSKNILSVHP 361
                     LHLA   Q    ++ LL        ++  +   +T LH +      S   
Sbjct: 3   GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEAST-- 60

Query: 362 LEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALS 417
           +E L   GA V   +  G++ +H+A       C   L+                 S
Sbjct: 61  VEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQS 116

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 64.5 bits (158), Expect = 2e-11
 Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 5/83 (6%)

Query: 337 VNASDCDNRTPLHASLSKNILSVHPLEILLKWGAN---VNARDIFGYSPIHIAALSELSQ 393
                 D  T LH ++         L+ LL + A    ++ ++  G + +H+AA+   + 
Sbjct: 2   FGYVTEDGDTALHLAVIHQHEPF--LDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEAS 59

Query: 394 CVDCLIMHGADISSKTPSGSSAL 416
            V+ L   GA +      G +AL
Sbjct: 60  TVEKLYAAGAGVLVAERGGHTAL 82

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  191 bits (489), Expect = 6e-56
 Identities = 59/266 (22%), Positives = 110/266 (41%), Gaps = 43/266 (16%)

Query: 150 DKYG--ALHLAAFNGSIKG----CSWLMLHGHDINF-TKDSYTPLHFAVLGNYVDCAKFL 202
           D+ G   LH+A   G++       +     G +++       TPLH AV+       + L
Sbjct: 6   DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLL 65

Query: 203 IKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAI 262
           +   A                           +P  L+  G +  H+A +    +CL+A+
Sbjct: 66  VTAGA---------------------------SPMALDRHGQTAAHLACEHRSPTCLRAL 98

Query: 263 LDSG---MADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKE-QIPLHLA 318
           LDS      D++ +  +   TALH+A      E +++LLE  A+ +  + K  + PL  A
Sbjct: 99  LDSAAPGTLDLEARNYDGL-TALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHA 157

Query: 319 AKCQSVECMEMLLRKGSQVNASDCDNRTPLH-ASLSKNILSVHPLEILLKWGANVNARDI 377
            +  S+  +++LL+ G+ VNA      + LH AS    +  V     L++ GA+ + ++ 
Sbjct: 158 VENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLV---RTLVRSGADSSLKNC 214

Query: 378 FGYSPIHIAALSELSQCVDCLIMHGA 403
              +P+ +A    +   +       A
Sbjct: 215 HNDTPLMVARSRRVIDILRGKATRPA 240

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  174 bits (445), Expect = 8e-50
 Identities = 68/248 (27%), Positives = 112/248 (45%), Gaps = 32/248 (12%)

Query: 180 TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVL 239
            +D  TPLH AV+   +     L+                                 ++ 
Sbjct: 6   DEDGDTPLHIAVVQGNLPAVHRLVN------LFQQGGR-----------------ELDIY 42

Query: 240 NNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLE 299
           NN   +PLH+A    L S ++ ++ +G A      +  + TA HLA E+    CLR LL+
Sbjct: 43  NNLRQTPLHLAVITTLPSVVRLLVTAG-ASPMALDRHGQ-TAAHLACEHRSPTCLRALLD 100

Query: 300 NHA----NCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN-RTPLHASLSK 354
           + A    +   RN+     LH+A   +  E +++LL +G+ ++A D  + R+PL  ++  
Sbjct: 101 SAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVEN 160

Query: 355 NILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSS 414
           N LS+  +++LL+ GANVNA+   G S +H A+   L   V  L+  GAD S K     +
Sbjct: 161 NSLSM--VQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDT 218

Query: 415 ALSIIMRN 422
            L +    
Sbjct: 219 PLMVARSR 226

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 89.4 bits (223), Expect = 4e-20
 Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 10/120 (8%)

Query: 305 NERNHKEQIPLHLAAKCQSVECMEMLL----RKGSQVNASDCDNRTPLHASLSKNILSVH 360
              +     PLH+A    ++  +  L+    + G +++  +   +TPLH ++   + SV 
Sbjct: 3   TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSV- 61

Query: 361 PLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGA----DISSKTPSGSSAL 416
            + +L+  GA+  A D  G +  H+A       C+  L+   A    D+ ++   G +AL
Sbjct: 62  -VRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTAL 120

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 74.4 bits (184), Expect = 6e-15
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 2/84 (2%)

Query: 337 VNASDCDNRTPLH-ASLSKNILSVHPL-EILLKWGANVNARDIFGYSPIHIAALSELSQC 394
              +D D  TPLH A +  N+ +VH L  +  + G  ++  +    +P+H+A ++ L   
Sbjct: 2   ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSV 61

Query: 395 VDCLIMHGADISSKTPSGSSALSI 418
           V  L+  GA   +    G +A  +
Sbjct: 62  VRLLVTAGASPMALDRHGQTAAHL 85

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  189 bits (483), Expect = 3e-55
 Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 33/258 (12%)

Query: 150 DKYG--ALHLAAFNGSIKGCSWLMLHGHDINF-TKDSYTPLHFAVLGNYVDCAKFLIKNK 206
            +     LH AA  G +  C  L+  G +I+  ++D  TPL  A   N+++  K+LIK  
Sbjct: 8   HQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAG 67

Query: 207 AHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSG 266
           A                             +  + +G + LH+AA +G    ++ +L +G
Sbjct: 68  A---------------------------LVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNG 100

Query: 267 MADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVEC 326
             DV+ +      T +  A E  +V+ +++LL   ++ N R+++E I LH AA    V+ 
Sbjct: 101 QMDVNCQDDGGW-TPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDI 159

Query: 327 MEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIA 386
            E+LL     ++A +    +PLH +  +N      + + L   ++V  ++  G +P+  A
Sbjct: 160 AEILLAAKCDLHAVNIHGDSPLHIAARENRYDC--VVLFLSRDSDVTLKNKEGETPLQCA 217

Query: 387 ALSELSQCVDCLIMHGAD 404
           +L+        +     D
Sbjct: 218 SLNSQVWSALQMSKALQD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  173 bits (441), Expect = 2e-49
 Identities = 63/245 (25%), Positives = 108/245 (44%), Gaps = 33/245 (13%)

Query: 176 DINF-TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQI 234
           +     ++  +PLH A    +VD    L++  A                           
Sbjct: 3   NFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGA--------------------------- 35

Query: 235 NPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECL 294
           N +  +    +PL  AA+   +  +K ++ +G A VD K  E   T LHLAA+ G+ E +
Sbjct: 36  NIDTCSEDQRTPLMEAAENNHLEAVKYLIKAG-ALVDPKDAEGS-TCLHLAAKKGHYEVV 93

Query: 295 RILLENHA-NCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLS 353
           + LL N   + N ++     P+  A + + V+ +++LL KGS +N  D +    LH +  
Sbjct: 94  QYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAF 153

Query: 354 KNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGS 413
              + +   EILL    +++A +I G SP+HIAA      CV   +   +D++ K   G 
Sbjct: 154 SGCVDI--AEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGE 211

Query: 414 SALSI 418
           + L  
Sbjct: 212 TPLQC 216

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  157 bits (400), Expect = 8e-44
 Identities = 47/232 (20%), Positives = 94/232 (40%), Gaps = 34/232 (14%)

Query: 144 GADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHGHDINF-TKDSYTPLHFAVLGNYVDCA 199
           GA++ +  +     L  AA N  ++   +L+  G  ++    +  T LH A    + +  
Sbjct: 34  GANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVV 93

Query: 200 KFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCL 259
           ++L+ N                            ++ N  ++ G +P+  A +   +  +
Sbjct: 94  QYLLSNGQ--------------------------MDVNCQDDGGWTPMIWATEYKHVDLV 127

Query: 260 KAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAA 319
           K +L  G +D++I+  E     LH AA +G V+   ILL    + +  N     PLH+AA
Sbjct: 128 KLLLSKG-SDINIRDNEEN-ICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAA 185

Query: 320 KCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGAN 371
           +    +C+ + L + S V   + +  TPL  +   + +       + K   +
Sbjct: 186 RENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWS--ALQMSKALQD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  154 bits (392), Expect = 1e-42
 Identities = 52/186 (27%), Positives = 93/186 (50%), Gaps = 5/186 (2%)

Query: 234 INPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVEC 293
           +N  + +    SPLH AA+ G +     ++ +G A++D  ++++R T L  AAEN ++E 
Sbjct: 2   MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAG-ANIDTCSEDQR-TPLMEAAENNHLEA 59

Query: 294 LRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQ-VNASDCDNRTPLHASL 352
           ++ L++  A  + ++ +    LHLAAK    E ++ LL  G   VN  D    TP+  + 
Sbjct: 60  VKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWAT 119

Query: 353 SKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSG 412
               + +  +++LL  G+++N RD      +H AA S      + L+    D+ +    G
Sbjct: 120 EYKHVDL--VKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHG 177

Query: 413 SSALSI 418
            S L I
Sbjct: 178 DSPLHI 183

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 96.7 bits (242), Expect = 1e-22
 Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 3/119 (2%)

Query: 301 HANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVH 360
           H N    +  ++ PLH AA+   V+   ML++ G+ ++    D RTPL  +   N L   
Sbjct: 1   HMNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEA- 59

Query: 361 PLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGA-DISSKTPSGSSALSI 418
            ++ L+K GA V+ +D  G + +H+AA     + V  L+ +G  D++ +   G + +  
Sbjct: 60  -VKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIW 117

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  188 bits (480), Expect = 4e-54
 Identities = 39/255 (15%), Positives = 90/255 (35%), Gaps = 17/255 (6%)

Query: 170 LMLHGHDINF-TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE----TIVHSAVSTNAVD 224
             L   D        ++  ++A+  N V     L+   A  +       +H A +     
Sbjct: 17  SFLSSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLENEFPLHQAATLEDTK 76

Query: 225 CVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHL 284
            V++LL   ++ +  ++KG + L+ A D G +  +K  +      +    K    T+ + 
Sbjct: 77  IVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKN-WRLMFYGKTGWKTSFYH 135

Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           A     V  +   L    +           +H+  K   V+ M +LL   +  N ++   
Sbjct: 136 AVMLNDVSIVSYFLSEIPS-TFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLL 194

Query: 345 RTP-LHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGA 403
             P +  ++    + +  L+ L K+  N+ + +           L + ++    +I    
Sbjct: 195 FIPDIKLAIDNKDIEM--LQALFKYDINIYSAN-------LENVLLDDAEIAKMIIEKHV 245

Query: 404 DISSKTPSGSSALSI 418
           +  S + +    +  
Sbjct: 246 EYKSDSYTKDLDIVK 260

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  155 bits (394), Expect = 2e-42
 Identities = 47/252 (18%), Positives = 82/252 (32%), Gaps = 20/252 (7%)

Query: 123 TALLWCVFVKREDLLDALHQLGADLSNDKYG--ALHLAAFNGSIKGCSWLMLHGHDIN-F 179
           +A  + +      L+  L   GA   N       LH AA     K    L+  G D + F
Sbjct: 33  SASYYAIADNNVRLVCTLLNAGALK-NLLENEFPLHQAATLEDTKIVKILLFSGLDDSQF 91

Query: 180 TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE-------TIVHSAVSTNAVDCVQLLLSL 232
                T L++AV    +   K  +K    +         T  + AV  N V  V   LS 
Sbjct: 92  DDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLS- 150

Query: 233 QINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVE 292
           +I         +S +HI    G +  +  +LD      +       +  + LA +N  +E
Sbjct: 151 EIPSTFDLAILLSCIHITIKNGHVDMMILLLDYM-TSTNTNNSLLFIPDIKLAIDNKDIE 209

Query: 293 CLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASL 352
            L+ L +   N                     E  +M++ K  +  +        +  + 
Sbjct: 210 MLQALFKYDINIYS-------ANLENVLLDDAEIAKMIIEKHVEYKSDSYTKDLDIVKNN 262

Query: 353 SKNILSVHPLEI 364
             + +     E+
Sbjct: 263 KLDEIISKNKEL 274

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  144 bits (366), Expect = 1e-38
 Identities = 31/202 (15%), Positives = 78/202 (38%), Gaps = 9/202 (4%)

Query: 216 SAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTK 275
           S ++T     ++  LS   +    +  G S  + A     +  +  +L++G A  ++   
Sbjct: 5   SRINTWKSKQLKSFLS-SKDTFKADVHGHSASYYAIADNNVRLVCTLLNAG-ALKNLLEN 62

Query: 276 ERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGS 335
           E     LH AA     + ++ILL +  + ++ + K    L+ A    +++ +++ ++K  
Sbjct: 63  E---FPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNW 119

Query: 336 QVNASDCDN-RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQC 394
           ++        +T  + ++  N +S+  +   L    +         S IHI   +     
Sbjct: 120 RLMFYGKTGWKTSFYHAVMLNDVSI--VSYFLSEIPS-TFDLAILLSCIHITIKNGHVDM 176

Query: 395 VDCLIMHGADISSKTPSGSSAL 416
           +  L+ +    ++         
Sbjct: 177 MILLLDYMTSTNTNNSLLFIPD 198

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  108 bits (272), Expect = 3e-26
 Identities = 28/218 (12%), Positives = 60/218 (27%), Gaps = 41/218 (18%)

Query: 123 TALLWCVFVKREDLLDALHQLGADL-SNDKYG---ALHLAAFNGSIKGCSWLMLHGHDIN 178
           TAL + V       +    +    L    K G   + + A     +   S+ +       
Sbjct: 97  TALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF 156

Query: 179 FTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNV 238
                 + +H  +   +VD    L+                               + N 
Sbjct: 157 DLAILLSCIHITIKNGHVDMMILLLDYMT---------------------------STNT 189

Query: 239 LNNKGVSP-LHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRIL 297
            N+    P + +A D   I  L+A+      ++         +A          E  +++
Sbjct: 190 NNSLLFIPDIKLAIDNKDIEMLQALFKYD-INIY--------SANLENVLLDDAEIAKMI 240

Query: 298 LENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGS 335
           +E H      ++ + + +    K   +      LR   
Sbjct: 241 IEKHVEYKSDSYTKDLDIVKNNKLDEIISKNKELRLMY 278

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  184 bits (470), Expect = 3e-53
 Identities = 61/264 (23%), Positives = 109/264 (41%), Gaps = 35/264 (13%)

Query: 150 DKYG--ALHLAAFNGSIKGCSWLMLHGHDIN-FTKDSYTPLHFAVLGNYVDCAKFLIKNK 206
           D Y    +  A   G  + C  L+  G+D+    K++ T LH+A + N +D  K+ I   
Sbjct: 6   DDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKG 65

Query: 207 AHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSG 266
           A +           + +                 +   +PLH A  +G +S +  ++  G
Sbjct: 66  AIV-----------DQLG---------------GDLNSTPLHWATRQGHLSMVVQLMKYG 99

Query: 267 MADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAA-KCQSVE 325
            AD  +   E   + +HLAA+ G+   +  L+    + +  +     PL  AA +  SV+
Sbjct: 100 -ADPSLIDGEGC-SCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVD 157

Query: 326 CMEMLLRKGSQVNASD-CDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIH 384
              +LL     VN  D     T LH ++     +V  + +LL+ GANV+A++I G S + 
Sbjct: 158 PTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTV--ISLLLEAGANVDAQNIKGESALD 215

Query: 385 IAALSELSQCVDCLIMHGADISSK 408
           +A   +    ++ L          
Sbjct: 216 LAKQRKNVWMINHLQEARQAKGYD 239

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  177 bits (452), Expect = 8e-51
 Identities = 51/239 (21%), Positives = 94/239 (39%), Gaps = 30/239 (12%)

Query: 181 KDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLN 240
             S   +  A      +  + L++                              +    +
Sbjct: 7   DYSTWDIVKATQYGIYERCRELVEAGY---------------------------DVRQPD 39

Query: 241 NKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLEN 300
            + V+ LH AA    I  +K  +  G A VD    +   T LH A   G++  +  L++ 
Sbjct: 40  KENVTLLHWAAINNRIDLVKYYISKG-AIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKY 98

Query: 301 HANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVH 360
            A+ +  + +    +HLAA+      +  L+ KG  V+  D +  TPL  + +    SV 
Sbjct: 99  GADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWA-AYRTHSVD 157

Query: 361 PLEILLKWGANVNARD-IFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSI 418
           P  +LL +  +VN  D     + +H A L+  +  +  L+  GA++ ++   G SAL +
Sbjct: 158 PTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDL 216

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  159 bits (405), Expect = 2e-44
 Identities = 51/232 (21%), Positives = 91/232 (39%), Gaps = 15/232 (6%)

Query: 123 TALLWCVFVKREDLLDALHQLGADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHGHDINF 179
             ++        +    L + G D+   DK     LH AA N  I    + +  G  ++ 
Sbjct: 11  WDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVD- 69

Query: 180 TKDS---YTPLHFAVLGNYVDCAKFLIKNKAHIHE------TIVHSAVSTNAVDCVQLLL 230
                   TPLH+A    ++     L+K  A          + +H A        V  L+
Sbjct: 70  QLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLI 129

Query: 231 SLQINPNVLNNKGVSPLHIAADRG-LISCLKAILDSGMADVDIKTKERRVTALHLAAENG 289
           +   + ++++  G++PL  AA R   +   + +L      V++  K  + TALH A   G
Sbjct: 130 AKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFN-VSVNLGDKYHKNTALHWAVLAG 188

Query: 290 YVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASD 341
               + +LLE  AN + +N K +  L LA + ++V  +  L          +
Sbjct: 189 NTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGYDN 240

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  148 bits (377), Expect = 1e-40
 Identities = 35/185 (18%), Positives = 76/185 (41%), Gaps = 7/185 (3%)

Query: 235 NPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECL 294
           +   +++     +  A   G+    + ++++G  DV    KE   T LH AA N  ++ +
Sbjct: 1   HMTHIDDYSTWDIVKATQYGIYERCRELVEAG-YDVRQPDKENV-TLLHWAAINNRIDLV 58

Query: 295 RILLENHANCNERNHKE-QIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLS 353
           +  +   A  ++        PLH A +   +  +  L++ G+  +  D +  + +H +  
Sbjct: 59  KYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQ 118

Query: 354 KNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELS-QCVDCLIMHGADISSKT-PS 411
               S+  +  L+  G +V+  D  G +P+  AA    S      L+     ++      
Sbjct: 119 FGHTSI--VAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYH 176

Query: 412 GSSAL 416
            ++AL
Sbjct: 177 KNTAL 181

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 95.2 bits (238), Expect = 5e-22
 Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 3/117 (2%)

Query: 303 NCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPL 362
           +    +      +  A +    E    L+  G  V   D +N T LH +   N + +  +
Sbjct: 1   HMTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDL--V 58

Query: 363 EILLKWGANVNARDI-FGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSI 418
           +  +  GA V+        +P+H A        V  L+ +GAD S     G S + +
Sbjct: 59  KYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHL 115

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  188 bits (480), Expect = 3e-53
 Identities = 62/314 (19%), Positives = 116/314 (36%), Gaps = 35/314 (11%)

Query: 123 TALLWCVFVKREDLLDALHQLGADLSN-DKYG--ALHLAAFNGSIKGCSWLMLHGHDINF 179
                      + L D  H      +  +      LH  A  GS      +     +I  
Sbjct: 63  YPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTEA-AGSYAITEPITRESVNIID 121

Query: 180 TKDSYTPLHFAVLGNYVDCAKFLIKNK--------AHIHE------TIVHSAVSTNAVDC 225
            + + T LH+    +  + ++ LI ++        A ++       T +  AV       
Sbjct: 122 PRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRL 181

Query: 226 VQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGM--ADVDIKTKERRVTALH 283
           V  L+    +P + N    S LH AA       +  +L+S     D++   +    TAL 
Sbjct: 182 VAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGM-TALM 240

Query: 284 LAAENGY---VECLRILLENHANCN--------ERNHKEQIPLHLAAKCQSVECMEMLLR 332
           + A N     V   ++L+E  A  +           +K +  LH AA+  ++  ++ L+ 
Sbjct: 241 IVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVG 300

Query: 333 -KGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSEL 391
            KGS  +  D D +TP+  +  +  + V  +  L++ GA+V A D   ++   +A  +  
Sbjct: 301 EKGSNKDKQDEDGKTPIMLAAQEGRIEV--VMYLIQQGASVEAVDATDHTARQLAQANNH 358

Query: 392 SQCVDCLIMHGADI 405
              VD       + 
Sbjct: 359 HNIVDIFDRCRPER 372

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  184 bits (470), Expect = 7e-52
 Identities = 56/301 (18%), Positives = 116/301 (38%), Gaps = 38/301 (12%)

Query: 150 DKYG--ALHLAAFNGSIKGCSWLMLHGHDINFTKDSY--TPLHFAVLGNYVDCAKFLIKN 205
             Y          NG+     +   +        +      LH    G+Y    + + + 
Sbjct: 58  QHYSLYPNPQGYGNGNDFLGDFNHTNLQIPT-EPEPESPIKLHTEAAGSY-AITEPITRE 115

Query: 206 KAHIHE-----TIVHSAVSTNAVDCVQLLLSLQI--------NPNVLNNKGVSPLHIAAD 252
             +I +     T++H   S ++ +  + L+  +         + N ++    +PL +A  
Sbjct: 116 SVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVL 175

Query: 253 RGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENH---ANCNERNH 309
                 +  ++ +G AD  I  K  R +ALH AA N     +  +L +     +  E + 
Sbjct: 176 ARRRRLVAYLMKAG-ADPTIYNKSER-SALHQAAANRDFGMMVYMLNSTKLKGDIEELDR 233

Query: 310 KEQIPLHLAAKC---QSVECMEMLLRKGSQVN--------ASDCDNRTPLHASLSKNILS 358
                L + A       V   ++L+ KG++V+        +     RT LH +   + + 
Sbjct: 234 NGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMP 293

Query: 359 VHPLEILL-KWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALS 417
           +  ++ L+ + G+N + +D  G +PI +AA     + V  LI  GA + +   +  +A  
Sbjct: 294 I--VKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQ 351

Query: 418 I 418
           +
Sbjct: 352 L 352

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  172 bits (439), Expect = 1e-47
 Identities = 50/296 (16%), Positives = 92/296 (31%), Gaps = 37/296 (12%)

Query: 149 NDKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAH 208
                +L  A+++G IK                 S  P              F   N   
Sbjct: 35  TSSQHSLLEASYDGYIKR--------QRNELQHYSLYPNPQGYGNGNDFLGDFNHTNLQI 86

Query: 209 IHE------TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRG-------L 255
             E        +H+  +  +    + +    +N         + LH  A          L
Sbjct: 87  PTEPEPESPIKLHTEAA-GSYAITEPITRESVNIID-PRHNRTVLHWIASNSSAEKSEDL 144

Query: 256 ISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPL 315
           I        +  ADV+    +   T L LA        +  L++  A+    N  E+  L
Sbjct: 145 IVHEAKECIAAGADVNAMDCDEN-TPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSAL 203

Query: 316 HLAAKCQSVECMEMLLRK---GSQVNASDCDNRTPLH-ASLSKNILSVHPLEILLKWGAN 371
           H AA  +    M  +L        +   D +  T L   + ++    V   ++L++ GA 
Sbjct: 204 HQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAK 263

Query: 372 VN--------ARDIFGYSPIHIAALSELSQCVDCLIMH-GADISSKTPSGSSALSI 418
           V+        +    G + +H AA       V  L+   G++   +   G + + +
Sbjct: 264 VDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIML 319

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  126 bits (319), Expect = 1e-31
 Identities = 43/188 (22%), Positives = 62/188 (32%), Gaps = 19/188 (10%)

Query: 237 NVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRI 296
           +         L  A+  G I   +  L               +        NG       
Sbjct: 31  HQSITSSQHSLLEASYDGYIKRQRNELQHY-----------SLYPNPQGYGNGNDFLGDF 79

Query: 297 LLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKN- 355
              N     E   +  I LH  A   S    E + R+   +      NRT LH   S + 
Sbjct: 80  NHTNLQIPTEPEPESPIKLHTEAAG-SYAITEPITRESVNIIDPR-HNRTVLHWIASNSS 137

Query: 356 -----ILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTP 410
                 L VH  +  +  GA+VNA D    +P+ +A L+   + V  L+  GAD +    
Sbjct: 138 AEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNK 197

Query: 411 SGSSALSI 418
           S  SAL  
Sbjct: 198 SERSALHQ 205

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  126 bits (318), Expect = 2e-31
 Identities = 45/228 (19%), Positives = 77/228 (33%), Gaps = 17/228 (7%)

Query: 202 LIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKA 261
            ++N+    +       S +++        ++   N L +  + P       G    L  
Sbjct: 20  PMENEEKNRKNHQSITSSQHSLLEASYDGYIKRQRNELQHYSLYPNPQGYGNG-NDFLGD 78

Query: 262 ILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKC 321
              + +        E     LH  A  G       +     N  +  H  +  LH  A  
Sbjct: 79  FNHTNLQIPTEPEPESP-IKLHTEA-AGSYAITEPITRESVNIIDPRHN-RTVLHWIASN 135

Query: 322 QSVECMEMLLR--------KGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVN 373
            S E  E L+          G+ VNA DCD  TPL  ++      +  +  L+K GA+  
Sbjct: 136 SSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRL--VAYLMKAGADPT 193

Query: 374 ARDIFGYSPIHIAALSELSQCVDCLIMH---GADISSKTPSGSSALSI 418
             +    S +H AA +     +  ++       DI     +G +AL I
Sbjct: 194 IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMI 241

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  184 bits (469), Expect = 5e-53
 Identities = 55/269 (20%), Positives = 94/269 (34%), Gaps = 33/269 (12%)

Query: 150 DKYG--ALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKA 207
              G   L +A+ +G                         +     +        I   A
Sbjct: 7   GPDGFTPLMIASCSG-------------------GGLETGNSEEEEDAPAVISDFIYQGA 47

Query: 208 HIH-------ETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLK 260
            +H       ET +H A   +  D  + LL    + N+ +N G +PLH A         +
Sbjct: 48  SLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQ 107

Query: 261 AILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAK 320
            ++ +   D+D +  +   T L LAA       L  L+ +HA+ N  +   +  LH AA 
Sbjct: 108 ILIRNRATDLDARMHDGT-TPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAA 166

Query: 321 CQSVECMEMLLRKGSQVNASDCDNRTPLH-ASLSKNILSVHPLEILLKWGANVNARDIFG 379
             +V+   +LL+ G+  +  +    TPL  A+   +  +    ++LL   AN +  D   
Sbjct: 167 VNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETA---KVLLDHFANRDITDHMD 223

Query: 380 YSPIHIAALSELSQCVDCLIMHGADISSK 408
             P  IA        V  L +        
Sbjct: 224 RLPRDIAQERMHHDIVRLLDLEHHHHHHH 252

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  168 bits (427), Expect = 3e-47
 Identities = 58/246 (23%), Positives = 96/246 (39%), Gaps = 21/246 (8%)

Query: 176 DINF-TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQI 234
           D+N    D +TPL  A                        +S    +A   +   +    
Sbjct: 2   DVNVRGPDGFTPLMIASCSGGG--------------LETGNSEEEEDAPAVISDFIYQGA 47

Query: 235 N-PNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVEC 293
           +  N  +  G + LH+AA        K +L++  AD +I+    R T LH A        
Sbjct: 48  SLHNQTDRTGETALHLAARYSRSDAAKRLLEAS-ADANIQDNMGR-TPLHAAVSADAQGV 105

Query: 294 LRILLENHA-NCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASL 352
            +IL+ N A + + R H    PL LAA+      +E L+   + VNA D   ++ LH + 
Sbjct: 106 FQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAA 165

Query: 353 SKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSG 412
           + N +      +LLK GAN + ++    +P+ +AA     +    L+ H A+        
Sbjct: 166 AVNNVDA--AVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMD 223

Query: 413 SSALSI 418
                I
Sbjct: 224 RLPRDI 229

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  144 bits (367), Expect = 3e-39
 Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 17/197 (8%)

Query: 234 INPNVLNNKGVSPLHIAADRGL-------------ISCLKAILDSGMADVDIKTKERRVT 280
           ++ NV    G +PL IA+  G               + +   +  G A +  +T     T
Sbjct: 1   MDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQG-ASLHNQTDRTGET 59

Query: 281 ALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKG-SQVNA 339
           ALHLAA     +  + LLE  A+ N +++  + PLH A    +    ++L+R   + ++A
Sbjct: 60  ALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDA 119

Query: 340 SDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLI 399
              D  TPL  +    +  +  LE L+   A+VNA D  G S +H AA          L+
Sbjct: 120 RMHDGTTPLILAARLAVEGM--LEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLL 177

Query: 400 MHGADISSKTPSGSSAL 416
            +GA+   +     + L
Sbjct: 178 KNGANKDMQNNREETPL 194

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  136 bits (346), Expect = 2e-36
 Identities = 50/197 (25%), Positives = 79/197 (40%), Gaps = 13/197 (6%)

Query: 123 TALLWCVFVKREDLLDALHQLGADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHG-HDIN 178
           TAL       R D    L +  AD    D  G   LH A    +      L+ +   D++
Sbjct: 59  TALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD 118

Query: 179 F-TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE------TIVHSAVSTNAVDCVQLLLS 231
               D  TPL  A         + LI + A ++       + +H A + N VD   +LL 
Sbjct: 119 ARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLK 178

Query: 232 LQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYV 291
              N ++ NN+  +PL +AA  G     K +LD   A+ DI     R     +A E  + 
Sbjct: 179 NGANKDMQNNREETPLFLAAREGSYETAKVLLDHF-ANRDITDHMDR-LPRDIAQERMHH 236

Query: 292 ECLRILLENHANCNERN 308
           + +R+L   H + +  +
Sbjct: 237 DIVRLLDLEHHHHHHHH 253

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  180 bits (459), Expect = 7e-52
 Identities = 54/250 (21%), Positives = 95/250 (38%), Gaps = 34/250 (13%)

Query: 180 TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVL 239
           T+D  + LH A++                               + ++ +       N  
Sbjct: 5   TEDGDSFLHLAIIHEEKALTM-----------------------EVIRQVKGDLAFLNFQ 41

Query: 240 NNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLE 299
           NN   +PLH+A         +A+L +G  D +++      T LHLA E G +  + +L +
Sbjct: 42  NNLQQTPLHLAVITNQPEIAEALLGAG-CDPELRDFRGN-TPLHLACEQGCLASVGVLTQ 99

Query: 300 NHANC------NERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASD-CDNRTPLHASL 352
           +             N+     LHLA+    +  +E+L+  G+ VNA + C+ RT LH ++
Sbjct: 100 SCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAV 159

Query: 353 SKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSG 412
                 +  + +LLK GA+VN     GYSP  +      ++    L     +     P  
Sbjct: 160 DLQNPDL--VSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPES 217

Query: 413 SSALSIIMRN 422
               S    +
Sbjct: 218 EDEESYDTES 227

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  173 bits (440), Expect = 3e-49
 Identities = 46/229 (20%), Positives = 80/229 (34%), Gaps = 20/229 (8%)

Query: 150 DKYG--ALHLAAFNGSIKGCS----WLMLHGHDINFT-KDSYTPLHFAVLGNYVDCAKFL 202
            + G   LHLA  +            +      +NF      TPLH AV+ N  + A+ L
Sbjct: 5   TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 64

Query: 203 IKNKAHIHE------TIVHSAVSTNAVDCVQLLLSLQINP------NVLNNKGVSPLHIA 250
           +              T +H A     +  V +L      P         N  G + LH+A
Sbjct: 65  LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA 124

Query: 251 ADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHK 310
           +  G +  ++ ++  G ADV+ +      TALHLA +    + + +LL+  A+ N   ++
Sbjct: 125 SIHGYLGIVELLVSLG-ADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQ 183

Query: 311 EQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSV 359
              P  L     S    + L +   +      ++               
Sbjct: 184 GYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEFTEF 232

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  141 bits (357), Expect = 4e-38
 Identities = 40/212 (18%), Positives = 69/212 (32%), Gaps = 19/212 (8%)

Query: 134 EDLLDALHQLGADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHGHDINF-TKDSYTPLHF 189
            +++  +    A L   +      LHLA      +    L+  G D         TPLH 
Sbjct: 25  MEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHL 84

Query: 190 AVLGNYVDCAKFLIKNKAHIH------------ETIVHSAVSTNAVDCVQLLLSLQINPN 237
           A     +     L ++    H             T +H A     +  V+LL+SL  + N
Sbjct: 85  ACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN 144

Query: 238 VLNNK-GVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRI 296
                 G + LH+A D      +  +L  G ADV+  T +   +   L          + 
Sbjct: 145 AQEPCNGRTALHLAVDLQNPDLVSLLLKCG-ADVNRVTYQGY-SPYQLTWGRPSTRIQQQ 202

Query: 297 LLENHANCNERNHKEQIPLHLAAKCQSVECME 328
           L +      +   + +       + +  E  E
Sbjct: 203 LGQLTLENLQMLPESEDEESYDTESEFTEFTE 234

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 69.1 bits (170), Expect = 4e-13
 Identities = 14/80 (17%), Positives = 33/80 (41%), Gaps = 2/80 (2%)

Query: 339 ASDCDNRTPLH-ASLSKNILSVHPL-EILLKWGANVNARDIFGYSPIHIAALSELSQCVD 396
               D  + LH A + +       +   +    A +N ++    +P+H+A ++   +  +
Sbjct: 3   QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAE 62

Query: 397 CLIMHGADISSKTPSGSSAL 416
            L+  G D   +   G++ L
Sbjct: 63  ALLGAGCDPELRDFRGNTPL 82

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  175 bits (447), Expect = 2e-50
 Identities = 54/245 (22%), Positives = 91/245 (37%), Gaps = 34/245 (13%)

Query: 167 CSWLMLHGHDINFTKDSY--TPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVD 224
            S  +  G  ++   D    T LH A   +  D AK L++  A                 
Sbjct: 7   ISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA----------------- 49

Query: 225 CVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHL 284
                     + N+ +N G +PLH A         + ++ +   D+D +  +   T L L
Sbjct: 50  ----------DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGT-TPLIL 98

Query: 285 AAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
           AA       L  L+ +HA+ N  +   +  LH AA   +V+   +LL+ G+  +  +   
Sbjct: 99  AARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNRE 158

Query: 345 RTPLH-ASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGA 403
            TPL  A+   +  +    ++LL   AN +  D     P  IA        V  L  +  
Sbjct: 159 ETPLFLAAREGSYETA---KVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNL 215

Query: 404 DISSK 408
             S +
Sbjct: 216 VRSPQ 220

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  168 bits (428), Expect = 1e-47
 Identities = 61/236 (25%), Positives = 103/236 (43%), Gaps = 35/236 (14%)

Query: 144 GADLSN--DKYG--ALHLAAFNGSIKGCSWLMLHGHDINF-TKDSYTPLHFAVLGNYVDC 198
           GA L N  D+ G  ALHLAA          L+    D N       TPLH AV  +    
Sbjct: 14  GASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGV 73

Query: 199 AKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISC 258
            + LI+N+A                           + +   + G +PL +AA   +   
Sbjct: 74  FQILIRNRA--------------------------TDLDARMHDGTTPLILAARLAVEGM 107

Query: 259 LKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLA 318
           L+ +++S  ADV+      + +ALH AA    V+   +LL+N AN + +N++E+ PL LA
Sbjct: 108 LEDLINSH-ADVNAVDDLGK-SALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLA 165

Query: 319 AKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNA 374
           A+  S E  ++LL   +  + +D  +R P   +  +    +  + +L ++    + 
Sbjct: 166 AREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDI--VRLLDEYNLVRSP 219

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  156 bits (398), Expect = 1e-43
 Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 6/200 (3%)

Query: 221 NAVDCVQLLLSLQIN-PNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRV 279
           +A   +   +    +  N  +  G + LH+AA        K +L++  AD +I+    R 
Sbjct: 2   DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEAS-ADANIQDNMGR- 59

Query: 280 TALHLAAENGYVECLRILLENHA-NCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVN 338
           T LH A         +IL+ N A + + R H    PL LAA+      +E L+   + VN
Sbjct: 60  TPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVN 119

Query: 339 ASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCL 398
           A D   ++ LH + + N +      +LLK GAN + ++    +P+ +AA     +    L
Sbjct: 120 AVDDLGKSALHWAAAVNNVDA--AVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVL 177

Query: 399 IMHGADISSKTPSGSSALSI 418
           + H A+             I
Sbjct: 178 LDHFANRDITDHMDRLPRDI 197

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  131 bits (332), Expect = 8e-35
 Identities = 51/198 (25%), Positives = 80/198 (40%), Gaps = 13/198 (6%)

Query: 123 TALLWCVFVKREDLLDALHQLGADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHG-HDIN 178
           TAL       R D    L +  AD    D  G   LH A    +      L+ +   D++
Sbjct: 27  TALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD 86

Query: 179 F-TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE------TIVHSAVSTNAVDCVQLLLS 231
               D  TPL  A         + LI + A ++       + +H A + N VD   +LL 
Sbjct: 87  ARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLK 146

Query: 232 LQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYV 291
              N ++ NN+  +PL +AA  G     K +LD   A+ DI     R     +A E  + 
Sbjct: 147 NGANKDMQNNREETPLFLAAREGSYETAKVLLDHF-ANRDITDHMDR-LPRDIAQERMHH 204

Query: 292 ECLRILLENHANCNERNH 309
           + +R+L E +   + + H
Sbjct: 205 DIVRLLDEYNLVRSPQLH 222

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  172 bits (438), Expect = 5e-49
 Identities = 59/253 (23%), Positives = 99/253 (39%), Gaps = 35/253 (13%)

Query: 154 ALHLAAFNGSIKG-CSWLMLHGHDINFT-KDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE 211
            LH A            L      +    +D   PLH++V     +   FL+    ++  
Sbjct: 5   PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV-- 62

Query: 212 TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGM-ADV 270
                    N  D               ++ G +P HIA   G +  +K++ D  +  D+
Sbjct: 63  ---------NLDDYP-------------DDSGWTPFHIACSVGNLEVVKSLYDRPLKPDL 100

Query: 271 DIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEML 330
           +  T +   T LHLA    + E  + L+EN A+   ++   QIPLH AA   S++ +E+L
Sbjct: 101 NKITNQGV-TCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELL 159

Query: 331 LRKG-SQVNASDCDNRTPLHASLSKNILSVHPLEILL-KWGANVNARDIFGYSPIHIAAL 388
              G S VN  D    TPL  +L++         +L+ K+GA  +  D  G     +A  
Sbjct: 160 CGLGKSAVNWQDKQGWTPLFHALAEGHGDA--AVLLVEKYGAEYDLVDNKGAKAEDVALN 217

Query: 389 SELSQCVDCLIMH 401
            +        + +
Sbjct: 218 EQ---VKKFFLNN 227

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  149 bits (379), Expect = 5e-41
 Identities = 40/198 (20%), Positives = 79/198 (39%), Gaps = 17/198 (8%)

Query: 144 GADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHGHDINF----TKDSYTPLHFAVLGNYV 196
            + L   D+ G   LH +    + +  S+L+    ++N         +TP H A     +
Sbjct: 26  PSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNL 85

Query: 197 DCAKFLIKN--KAHIHE------TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLH 248
           +  K L     K  +++      T +H AV     +  Q L+    +  + +     PLH
Sbjct: 86  EVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLH 145

Query: 249 IAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENH-ANCNER 307
            AA  G +  ++ +   G + V+ + K+   T L  A   G+ +   +L+E + A  +  
Sbjct: 146 RAASVGSLKLIELLCGLGKSAVNWQDKQGW-TPLFHALAEGHGDAAVLLVEKYGAEYDLV 204

Query: 308 NHKEQIPLHLAAKCQSVE 325
           ++K      +A   Q  +
Sbjct: 205 DNKGAKAEDVALNEQVKK 222

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  115 bits (291), Expect = 3e-29
 Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 8/143 (5%)

Query: 280 TALHLAAENG-YVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVN 338
             LH A     + +   +L    +   +++   +IPLH +   Q+ E    LL K   VN
Sbjct: 4   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 63

Query: 339 ASDC---DNRTPLHASLSKNILSVHPLEILL--KWGANVNARDIFGYSPIHIAALSELSQ 393
             D       TP H + S   L V  ++ L       ++N     G + +H+A   +  +
Sbjct: 64  LDDYPDDSGWTPFHIACSVGNLEV--VKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFE 121

Query: 394 CVDCLIMHGADISSKTPSGSSAL 416
               LI +GA +  K       L
Sbjct: 122 VSQFLIENGASVRIKDKFNQIPL 144

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 62.5 bits (153), Expect = 5e-11
 Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 6/79 (7%)

Query: 344 NRTPLH-ASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHG 402
           +  PLH A +      V   E+L    + +  +D  G  P+H +   +  +    L+   
Sbjct: 2   SNYPLHQACMENEFFKV--QELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKM 59

Query: 403 ADI---SSKTPSGSSALSI 418
            ++        SG +   I
Sbjct: 60  ENVNLDDYPDDSGWTPFHI 78

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  162 bits (412), Expect = 1e-45
 Identities = 39/215 (18%), Positives = 72/215 (33%), Gaps = 16/215 (7%)

Query: 180 TKDSYTPLHFAVLGNYVDCAKFLIKNKAHI------HETIVHSAVSTNAVDCVQLLLSLQ 233
            K     +  A+          L   +  I       +T      S      +       
Sbjct: 9   VKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIP-----S 63

Query: 234 INPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVEC 293
                      +PLH AA RG +S L+  LD+    V+   K    TAL+ A   G+ + 
Sbjct: 64  NYVAEQAESIDNPLHEAAKRGNLSWLRECLDNR-VGVNGLDKAGS-TALYWACHGGHKDI 121

Query: 294 LRILLENH-ANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASL 352
           + +L        N++N      LH AA     + +++LL KG++ +  + + +     + 
Sbjct: 122 VEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMAT 181

Query: 353 SKNILSVHPLEILLKWGANVNARDIFGYSPIHIAA 387
           +    S+  L+      A     +   Y     + 
Sbjct: 182 NAACASL--LKKKQGTDAVRTLSNAEDYLDDEDSD 214

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  157 bits (400), Expect = 4e-44
 Identities = 35/204 (17%), Positives = 74/204 (36%), Gaps = 5/204 (2%)

Query: 150 DKYG--ALHLAAFNGSIKGCSWLMLHGHDINF-TKDSYTPLHFAVLGNYVDCAKFLIKN- 205
            K G   +  A +    +    L +   DI + T  S T                     
Sbjct: 9   VKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAE 68

Query: 206 KAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDS 265
           +A   +  +H A     +  ++  L  ++  N L+  G + L+ A   G    ++ +   
Sbjct: 69  QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQ 128

Query: 266 GMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVE 325
              +++ + K    TALH AA  GY + +++LL   A  + RN ++++   +A       
Sbjct: 129 PNIELNQQNKLGD-TALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACAS 187

Query: 326 CMEMLLRKGSQVNASDCDNRTPLH 349
            ++      +    S+ ++     
Sbjct: 188 LLKKKQGTDAVRTLSNAEDYLDDE 211

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  136 bits (345), Expect = 1e-36
 Identities = 33/209 (15%), Positives = 71/209 (33%), Gaps = 18/209 (8%)

Query: 123 TALLWCVFVKREDLLDALHQLGADL---SNDKYGALHLAAFNGSIKGCSWLMLHGHDINF 179
             +   ++       D L+    D+   ++            G        ++  + +  
Sbjct: 14  VKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRT-----GLIPSNYVAE 68

Query: 180 T-KDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE------TIVHSAVSTNAVDCVQLLLS- 231
             +    PLH A     +   +  + N+  ++       T ++ A      D V++L + 
Sbjct: 69  QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQ 128

Query: 232 LQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYV 291
             I  N  N  G + LH AA +G    ++ +L  G A  D++  E++  A  +A      
Sbjct: 129 PNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKG-ARTDLRNIEKK-LAFDMATNAACA 186

Query: 292 ECLRILLENHANCNERNHKEQIPLHLAAK 320
             L+      A     N ++ +    +  
Sbjct: 187 SLLKKKQGTDAVRTLSNAEDYLDDEDSDL 215

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  130 bits (329), Expect = 2e-34
 Identities = 34/184 (18%), Positives = 56/184 (30%), Gaps = 10/184 (5%)

Query: 236 PNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLR 295
           P      G   +  A           +      D+   T     T        G     R
Sbjct: 5   PPKPVKPGQVKVFRALYTFEPRTPDELYIEE-GDIIYITDMSD-TNWWKGTSKG-----R 57

Query: 296 ILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKN 355
             L       E+      PLH AAK  ++  +   L     VN  D    T L+ +    
Sbjct: 58  TGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGG 117

Query: 356 ILSVHPLEILL-KWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSS 414
              +  +E+L  +    +N ++  G + +H AA    +  V  L+  GA    +      
Sbjct: 118 HKDI--VEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKL 175

Query: 415 ALSI 418
           A  +
Sbjct: 176 AFDM 179

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 86.1 bits (214), Expect = 4e-19
 Identities = 22/143 (15%), Positives = 34/143 (23%), Gaps = 11/143 (7%)

Query: 123 TALLWCVFVKREDLLDALHQLGADL-SNDKYG--ALHLAAFNGSIKGCSWLMLH-GHDIN 178
             L           L         +   DK G  AL+ A   G       L      ++N
Sbjct: 75  NPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELN 134

Query: 179 FT-KDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE------TIVHSAVSTNAVDCVQLLLS 231
              K   T LH A    Y D  + L+   A               A +      ++    
Sbjct: 135 QQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQG 194

Query: 232 LQINPNVLNNKGVSPLHIAADRG 254
                 + N +       +    
Sbjct: 195 TDAVRTLSNAEDYLDDEDSDLEH 217

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  161 bits (410), Expect = 2e-45
 Identities = 55/253 (21%), Positives = 99/253 (39%), Gaps = 34/253 (13%)

Query: 154 ALHLAAFNGSIKGCSWLMLHGHDINF-TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHET 212
             +LA      +    ++          +DS T LH+A    + +  +FL++        
Sbjct: 10  ICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGV----- 64

Query: 213 IVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDI 272
                                   N  ++ G SPLHIAA  G    +KA+L  G A V+ 
Sbjct: 65  ----------------------PVNDKDDAGWSPLHIAASAGXDEIVKALLVKG-AHVNA 101

Query: 273 KTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLR 332
             +    T LH AA     E   +LLE  AN + ++H +   +H AA   +++ + +LL 
Sbjct: 102 VNQNGC-TPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLF 160

Query: 333 KGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELS 392
             +  N  D +  TPLH +  +  +     + L+  GA++   +    +P+ +A      
Sbjct: 161 YKASTNIQDTEGNTPLHLACDEERVEE--AKFLVTQGASIYIENKEEKTPLQVAKGGL-- 216

Query: 393 QCVDCLIMHGADI 405
             +   +  G + 
Sbjct: 217 GLILKRLAEGEEA 229

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  150 bits (381), Expect = 2e-41
 Identities = 54/238 (22%), Positives = 91/238 (38%), Gaps = 31/238 (13%)

Query: 185 TPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGV 244
              + A  G   +  + ++ +K+                                +    
Sbjct: 9   MICNLAYSGKLDELKERILADKS---------------------------LATRTDQDSR 41

Query: 245 SPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANC 304
           + LH A   G    ++ +L  G   V+ K      + LH+AA  G  E ++ LL   A+ 
Sbjct: 42  TALHWACSAGHTEIVEFLLQLG-VPVNDKDDAGW-SPLHIAASAGXDEIVKALLVKGAHV 99

Query: 305 NERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEI 364
           N  N     PLH AA     E   MLL  G+  +A D  + T +H + +K  L +  + I
Sbjct: 100 NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKM--VHI 157

Query: 365 LLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRN 422
           LL + A+ N +D  G +P+H+A   E  +    L+  GA I  +     + L +    
Sbjct: 158 LLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGG 215

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  139 bits (352), Expect = 1e-37
 Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 4/208 (1%)

Query: 240 NNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLE 299
               +   ++A    L    + IL    +      ++ R TALH A   G+ E +  LL+
Sbjct: 4   CVSNIMICNLAYSGKLDELKERILADK-SLATRTDQDSR-TALHWACSAGHTEIVEFLLQ 61

Query: 300 NHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSV 359
                N+++     PLH+AA     E ++ LL KG+ VNA + +  TPLH + SKN   +
Sbjct: 62  LGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEI 121

Query: 360 HPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSII 419
               +LL+ GAN +A+D +  + +H AA     + V  L+ + A  + +   G++ L + 
Sbjct: 122 --AVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLA 179

Query: 420 MRNTPSSISSVRKKLDSSISLQDPEAST 447
                   +       +SI +++ E  T
Sbjct: 180 CDEERVEEAKFLVTQGASIYIENKEEKT 207

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  122 bits (308), Expect = 1e-31
 Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 11/214 (5%)

Query: 280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNA 339
              +LA      E    +L + +     +   +  LH A      E +E LL+ G  VN 
Sbjct: 9   MICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVND 68

Query: 340 SDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLI 399
            D    +PLH + S     +  ++ LL  GA+VNA +  G +P+H AA     +    L+
Sbjct: 69  KDDAGWSPLHIAASAGXDEI--VKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLL 126

Query: 400 MHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQDPEASTKDIELKLN---- 455
             GA+  +K    ++A+          +  +     +S ++QD E +T            
Sbjct: 127 EGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVE 186

Query: 456 -FKYILQNGPD----GEIGMLKIFQNDGQKEILE 484
             K+++  G       +     +    G   ++ 
Sbjct: 187 EAKFLVTQGASIYIENKEEKTPLQVAKGGLGLIL 220

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  101 bits (252), Expect = 3e-24
 Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 35/220 (15%)

Query: 123 TALLWCVFVKREDLLDALHQLGADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHGHDINF 179
           TAL W       ++++ L QLG  +   D  G   LH+AA  G  +    L++ G  +N 
Sbjct: 42  TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNA 101

Query: 180 -TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNV 238
             ++  TPLH+A   N  + A  L++  A                           NP+ 
Sbjct: 102 VNQNGCTPLHYAASKNRHEIAVMLLEGGA---------------------------NPDA 134

Query: 239 LNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILL 298
            ++   + +H AA +G +  +  +L    A  +I+  E   T LHLA +   VE  + L+
Sbjct: 135 KDHYDATAMHRAAAKGNLKMVHILLFYK-ASTNIQDTEGN-TPLHLACDEERVEEAKFLV 192

Query: 299 ENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVN 338
              A+    N +E+ PL +A     +  +   L +G + +
Sbjct: 193 TQGASIYIENKEEKTPLQVAK--GGLGLILKRLAEGEEAS 230

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 59.5 bits (144), Expect = 5e-10
 Identities = 30/134 (22%), Positives = 51/134 (38%), Gaps = 12/134 (8%)

Query: 115 KASQAEKTTALLWCVFVKREDLLDALHQLGADL---SNDKYGALHLAAFNGSIKGCSWLM 171
            A      T L +     R ++   L + GA+     +    A+H AA  G++K    L+
Sbjct: 100 NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILL 159

Query: 172 LHGHDINFT-KDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE------TIVHSAVSTNAVD 224
            +    N    +  TPLH A     V+ AKFL+   A I+       T +  A     + 
Sbjct: 160 FYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVA--KGGLG 217

Query: 225 CVQLLLSLQINPNV 238
            +   L+     ++
Sbjct: 218 LILKRLAEGEEASM 231

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  161 bits (409), Expect = 6e-45
 Identities = 41/282 (14%), Positives = 85/282 (30%), Gaps = 47/282 (16%)

Query: 108 EMATLFSKASQAEKTTALLWCVFVKREDLLDALHQLGADLSNDKYGALHLAAFNGSIKGC 167
           E+  +    +  E     L                + AD+ ++       AA     +  
Sbjct: 2   EVNKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKAD-EQA 60

Query: 168 SWLMLHGHDINFTKDSY--TPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDC 225
              +L   D++   D    T L F        C + L +  A +           +  D 
Sbjct: 61  LSQLLEDRDVD-AVDENGRTALLFVAGLGSDKCVRLLAEAGADL-----------DHRD- 107

Query: 226 VQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLA 285
                            G++ LH+AA       ++A+++ G AD++++ +    TAL LA
Sbjct: 108 --------------MRGGLTALHMAAGYVRPEVVEALVELG-ADIEVEDERGL-TALELA 151

Query: 286 AENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNR 345
            E          ++          ++ I +      +  E  E++ ++G          +
Sbjct: 152 REILKTTPKGNPMQFGRR---IGLEKVINVLEGQVFEYAEVDEIVEKRG--------KGK 200

Query: 346 TPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAA 387
              +    K+        +     A   A+D      +  A 
Sbjct: 201 DVEYLVRWKD--GGDCEWVKGVHVAEDVAKD--YEDGLEYAV 238

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  154 bits (391), Expect = 2e-42
 Identities = 37/270 (13%), Positives = 80/270 (29%), Gaps = 45/270 (16%)

Query: 139 ALHQLGADLSNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDC 198
               +G+  + +      +   +G     SW+       +   +  TP   A        
Sbjct: 4   NKI-IGSRTAGEGAMEYLIEWKDGHSP--SWVPSSYIAADVVSEYETPWWTAARKADEQA 60

Query: 199 AKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISC 258
              L+                               + + ++  G + L   A  G   C
Sbjct: 61  LSQLL-----------EDR-----------------DVDAVDENGRTALLFVAGLGSDKC 92

Query: 259 LKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLA 318
           ++ + ++G AD+D +     +TALH+AA     E +  L+E  A+    + +    L LA
Sbjct: 93  VRLLAEAG-ADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELA 151

Query: 319 AKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIF 378
            +          ++ G ++          +          V            +  +   
Sbjct: 152 REILKTTPKGNPMQFGRRIGLEK---VINVLEGQVFEYAEV----------DEIVEKRGK 198

Query: 379 GYSPIHIAALSELSQCVDCLIMHGADISSK 408
           G    ++    +   C     +H A+  +K
Sbjct: 199 GKDVEYLVRWKDGGDCEWVKGVHVAEDVAK 228

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  119 bits (301), Expect = 2e-30
 Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 7/140 (5%)

Query: 280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNA 339
               +  ++G+           A+        + P   AA+    + +  LL +   V+A
Sbjct: 17  MEYLIEWKDGHSPSWVPSSYIAADVVSEY---ETPWWTAARKADEQALSQLL-EDRDVDA 72

Query: 340 SDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDI-FGYSPIHIAALSELSQCVDCL 398
            D + RT L             + +L + GA+++ RD+  G + +H+AA     + V+ L
Sbjct: 73  VDENGRTALLFVAGLGSDKC--VRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEAL 130

Query: 399 IMHGADISSKTPSGSSALSI 418
           +  GADI  +   G +AL +
Sbjct: 131 VELGADIEVEDERGLTALEL 150

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 90.0 bits (224), Expect = 3e-20
 Identities = 32/177 (18%), Positives = 54/177 (30%), Gaps = 20/177 (11%)

Query: 123 TALLWCVFVKREDLLDALHQLGADL--SNDKYG--ALHLAAFNGSIKGCSWLMLHGHDIN 178
           TALL+   +  +  +  L + GADL   + + G  ALH+AA     +    L+  G DI 
Sbjct: 79  TALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIE 138

Query: 179 F-TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE---TIVHSAVSTNAVDCVQLLLSLQI 234
              +   T L  A            ++    I       V         +  +++     
Sbjct: 139 VEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEK--- 195

Query: 235 NPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYV 291
                  KG    ++   +    C         A+   K  E     L  A     +
Sbjct: 196 -----RGKGKDVEYLVRWKDGGDCEWVKGVHV-AEDVAKDYE---DGLEYAVAESVI 243

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  155 bits (393), Expect = 7e-43
 Identities = 42/257 (16%), Positives = 83/257 (32%), Gaps = 49/257 (19%)

Query: 150 DKYG--ALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKA 207
           +  G  +L         K  S  + HG  + F       L  + L    D  + +I    
Sbjct: 2   EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEVD 61

Query: 208 HIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGM 267
                                      +P++ N++G++ LH A   G    +K ++  G 
Sbjct: 62  ---------------------------DPSLPNDEGITALHNAVCAGHTEIVKFLVQFG- 93

Query: 268 ADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQ---IPLHLAAKCQSV 324
            +V+    +   T LH AA    V+  + L+E+ A      + +           +    
Sbjct: 94  VNVNAADSDGW-TPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYT 152

Query: 325 ECMEMLLRKGSQVNASDCDNRTPLHASLSKN-------------ILSVHPLEILLKWGAN 371
           +C + L     ++   +      L     +N             I+     + +  W A 
Sbjct: 153 QCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWAR 212

Query: 372 VNARDIFGYSPIHIAAL 388
           +N ++  GY P ++  L
Sbjct: 213 LNDKE--GYVPRNLLGL 227

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  139 bits (353), Expect = 2e-37
 Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 8/179 (4%)

Query: 241 NKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLEN 300
             G   L       L       +  G   + +K     +  L  ++  G  + ++ ++  
Sbjct: 3   ITGQVSLPPGKRTNLRKTGSERIAHG---MRVKFNPLPLALLLDSSLEGEFDLVQRIIYE 59

Query: 301 HANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVH 360
             + +  N +    LH A      E ++ L++ G  VNA+D D  TPLH + S N + V 
Sbjct: 60  VDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQV- 118

Query: 361 PLEILLKWGANVNAR---DIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSAL 416
             + L++ GA V A    D+   +          +QC   L      +         AL
Sbjct: 119 -CKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYAL 176

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 98.1 bits (245), Expect = 4e-23
 Identities = 39/186 (20%), Positives = 62/186 (33%), Gaps = 21/186 (11%)

Query: 123 TALLWCVFVKREDLLDALHQLGADLS-NDKYG--ALHLAAFNGSIKGCSWLMLHGHDINF 179
             LL        DL+  +     D S  +  G  ALH A   G  +   +L+  G ++N 
Sbjct: 39  ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 98

Query: 180 -TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE---------TIVHSAVSTNAVDCVQLL 229
              D +TPLH A   N V   KFL+++ A +                 +      C Q L
Sbjct: 99  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 158

Query: 230 LSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTK-ERRVTALHLAAEN 288
             +Q    ++N   +  L     +        +       + I  + +        A  N
Sbjct: 159 YGVQEKMGIMNKGVIYALWDYEPQN----DDELPMKEGDCMTIIHREDEDEIEWWWARLN 214

Query: 289 ---GYV 291
              GYV
Sbjct: 215 DKEGYV 220

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  151 bits (384), Expect = 3e-42
 Identities = 35/169 (20%), Positives = 66/169 (39%), Gaps = 3/169 (1%)

Query: 240 NNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLE 299
           + + +  +      G    ++  LD+   D++        + LH A   G    + +L+ 
Sbjct: 2   SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGF-SPLHWACREGRSAVVEMLIM 60

Query: 300 NHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSV 359
             A  N  N  +  PLHLAA     + ++ LL+  + +NA +     PLH +       V
Sbjct: 61  RGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQV 120

Query: 360 HPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSK 408
              E L+  GA V+  + +G  P+  A         +     G +++  
Sbjct: 121 --AEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRI 167

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  138 bits (350), Expect = 8e-38
 Identities = 38/208 (18%), Positives = 74/208 (35%), Gaps = 36/208 (17%)

Query: 180 TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVL 239
           + +    +            +  + N  +                          + N  
Sbjct: 2   SPEFMDDIFTQCREGNAVAVRLWLDNTEN--------------------------DLNQG 35

Query: 240 NNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLE 299
           ++ G SPLH A   G  + ++ ++  G A +++  +    T LHLAA +G+ + ++ LL+
Sbjct: 36  DDHGFSPLHWACREGRSAVVEMLIMRG-ARINVMNRGDD-TPLHLAASHGHRDIVQKLLQ 93

Query: 300 NHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSV 359
             A+ N  N    +PLH A      +  E L+  G+ V+  +     P+  + +     +
Sbjct: 94  YKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELL 153

Query: 360 HPLEILLKWGANVNARDIFGYSPIHIAA 387
              E   K G N+N        P     
Sbjct: 154 --RERAEKMGQNLNRI------PYKDTF 173

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  137 bits (347), Expect = 2e-37
 Identities = 39/181 (21%), Positives = 61/181 (33%), Gaps = 16/181 (8%)

Query: 148 SNDKYGALHLAAFNGSIKGCSWLMLHG-HDIN-FTKDSYTPLHFAVLGNYVDCAKFLIKN 205
           S +    +      G+       + +  +D+N      ++PLH+A         + LI  
Sbjct: 2   SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMR 61

Query: 206 KAHIHE------TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCL 259
            A I+       T +H A S    D VQ LL  + + N +N  G  PLH A   G     
Sbjct: 62  GARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVA 121

Query: 260 KAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAA 319
           + ++ +G A V I  K      +  A             +   N N       IP     
Sbjct: 122 EDLVANG-ALVSICNKYGE-MPVDKAKAPLRELLRERAEKMGQNLNR------IPYKDTF 173

Query: 320 K 320
            
Sbjct: 174 W 174

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  132 bits (335), Expect = 9e-36
 Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 3/140 (2%)

Query: 280 TALHLAAENGYVECLRILLENHANC-NERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVN 338
             +      G    +R+ L+N  N  N+ +     PLH A +      +EML+ +G+++N
Sbjct: 7   DDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARIN 66

Query: 339 ASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCL 398
             +  + TPLH + S     +  ++ LL++ A++NA +  G  P+H A      Q  + L
Sbjct: 67  VMNRGDDTPLHLAASHGHRDI--VQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDL 124

Query: 399 IMHGADISSKTPSGSSALSI 418
           + +GA +S     G   +  
Sbjct: 125 VANGALVSICNKYGEMPVDK 144

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 69.0 bits (170), Expect = 1e-13
 Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 4/82 (4%)

Query: 140 LHQLGADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHGHDINF-TKDSYTPLHFAVLGNY 195
           L Q  AD+ + +++G   LH A F G  +    L+ +G  ++   K    P+  A     
Sbjct: 91  LLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLR 150

Query: 196 VDCAKFLIKNKAHIHETIVHSA 217
               +   K   +++       
Sbjct: 151 ELLRERAEKMGQNLNRIPYKDT 172

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score =  134 bits (339), Expect = 1e-35
 Identities = 42/194 (21%), Positives = 75/194 (38%), Gaps = 25/194 (12%)

Query: 243 GVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHA 302
             SPL +AA    +  L  +L     +V  +      TALH+AA    +E   +L+E   
Sbjct: 3   WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGE-TALHIAALYDNLEAAMVLMEAAP 61

Query: 303 N-----CNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN------------- 344
                      ++ Q  LH+A   Q+V  +  LL +G+ V+A    +             
Sbjct: 62  ELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYG 121

Query: 345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSE----LSQCVDCLIM 400
             PL  +       +  + +L++ GA++ A+D  G + +HI  L        Q  + L+ 
Sbjct: 122 EHPLSFAACVGSEEI--VRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLS 179

Query: 401 HGADISSKTPSGSS 414
           +      K+     
Sbjct: 180 YDGGDHLKSLELVP 193

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score =  115 bits (290), Expect = 3e-29
 Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 23/157 (14%)

Query: 280 TALHLAAENGYVECLRILLENH-ANCNERNHKEQIPLHLAAKCQSVECMEMLLRKG---- 334
           + L LAA+   V+ L  LL+      ++R    +  LH+AA   ++E   +L+       
Sbjct: 5   SPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELV 64

Query: 335 -SQVNASDCDNRTPLH-ASLSKNILSVHPLEILLKWGANVNARDI-------------FG 379
              + +   + +T LH A +++N+  V     LL  GA+V+AR               +G
Sbjct: 65  FEPMTSELYEGQTALHIAVINQNVNLV---RALLARGASVSARATGSVFHYRPHNLIYYG 121

Query: 380 YSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSAL 416
             P+  AA     + V  LI HGADI ++   G++ L
Sbjct: 122 EHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVL 158

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  145 bits (368), Expect = 2e-40
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 30/198 (15%)

Query: 185 TPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGV 244
             +H       +D  K  ++                   + V          N  + +G 
Sbjct: 4   LSIHQLAAQGELDQLKEHLRKGD----------------NLV----------NKPDERGF 37

Query: 245 SPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANC 304
           +PL  A+  G I  ++ +L+ G AD  I  KER  +AL LA+  GY + + +LLE   + 
Sbjct: 38  TPLIWASAFGEIETVRFLLEWG-ADPHILAKERE-SALSLASTGGYTDIVGLLLERDVDI 95

Query: 305 NERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEI 364
           N  +     PL  A +   V+C+E LL +G+ +        TP+  +++     V   ++
Sbjct: 96  NIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKV--QQV 153

Query: 365 LLKWGANVNARDIFGYSP 382
           +      +   ++    P
Sbjct: 154 IENHILKLFQSNLVPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  142 bits (362), Expect = 2e-39
 Identities = 39/167 (23%), Positives = 70/167 (41%), Gaps = 3/167 (1%)

Query: 246 PLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCN 305
            +H  A +G +  LK  L  G   V+   +    T L  A+  G +E +R LLE  A+ +
Sbjct: 5   SIHQLAAQGELDQLKEHLRKGDNLVNKPDERGF-TPLIWASAFGEIETVRFLLEWGADPH 63

Query: 306 ERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEIL 365
               + +  L LA+     + + +LL +   +N  D +  TPL  ++  N +    +E L
Sbjct: 64  ILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKC--VEAL 121

Query: 366 LKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSG 412
           L  GA++      GY+P+ +A      +    +  H   +       
Sbjct: 122 LARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVP 168

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  138 bits (351), Expect = 5e-38
 Identities = 34/196 (17%), Positives = 69/196 (35%), Gaps = 31/196 (15%)

Query: 154 ALHLAAFNGSIKGCSWLMLHGHDINFTKDSY--TPLHFAVLGNYVDCAKFLIKNKAHIHE 211
           ++H  A  G +      +  G ++    D    TPL +A     ++  +FL++  A    
Sbjct: 5   SIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGA---- 60

Query: 212 TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVD 271
                                  +P++L  +  S L +A+  G    +  +L+    D++
Sbjct: 61  -----------------------DPHILAKERESALSLASTGGYTDIVGLLLERD-VDIN 96

Query: 272 IKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLL 331
           I       T L  A    +V+C+  LL   A+          P+ LA      +  +++ 
Sbjct: 97  IYDWNGG-TPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIE 155

Query: 332 RKGSQVNASDCDNRTP 347
               ++  S+     P
Sbjct: 156 NHILKLFQSNLVPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  127 bits (322), Expect = 4e-34
 Identities = 30/140 (21%), Positives = 65/140 (46%), Gaps = 3/140 (2%)

Query: 280 TALHLAAENGYVECLRILLENHANC-NERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVN 338
            ++H  A  G ++ L+  L    N  N+ + +   PL  A+    +E +  LL  G+  +
Sbjct: 4   LSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH 63

Query: 339 ASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCL 398
               +  + L  + +     +  + +LL+   ++N  D  G +P+  A      +CV+ L
Sbjct: 64  ILAKERESALSLASTGGYTDI--VGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEAL 121

Query: 399 IMHGADISSKTPSGSSALSI 418
           +  GAD++++  SG + + +
Sbjct: 122 LARGADLTTEADSGYTPMDL 141

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  122 bits (309), Expect = 3e-32
 Identities = 39/197 (19%), Positives = 70/197 (35%), Gaps = 34/197 (17%)

Query: 123 TALLWCVFVKREDLLDALHQLGADLSN--DKYG--ALHLAAFNGSIKGCSWLMLHGHDIN 178
            ++         D L    + G +L N  D+ G   L  A+  G I+   +L+  G D +
Sbjct: 4   LSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH 63

Query: 179 F-TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPN 237
              K+  + L  A  G Y D    L++                              + N
Sbjct: 64  ILAKERESALSLASTGGYTDIVGLLLERDV---------------------------DIN 96

Query: 238 VLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRIL 297
           + +  G +PL  A     + C++A+L  G AD+  +      T + LA   GY +  +++
Sbjct: 97  IYDWNGGTPLLYAVRGNHVKCVEALLARG-ADLTTEADSGY-TPMDLAVALGYRKVQQVI 154

Query: 298 LENHANCNERNHKEQIP 314
             +     + N     P
Sbjct: 155 ENHILKLFQSNLVPADP 171

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  143 bits (363), Expect = 3e-39
 Identities = 40/228 (17%), Positives = 84/228 (36%), Gaps = 36/228 (15%)

Query: 180 TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVL 239
           T +    L  A   +     + L                                  + +
Sbjct: 3   TYEVGALLEAANQRDTKKVKEILQDTTY---------------------------QVDEV 35

Query: 240 NNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLE 299
           + +G +PL+IA     I   KA++D G AD++++      +    A   G  E L  +L+
Sbjct: 36  DTEGNTPLNIAVHNNDIEIAKALIDRG-ADINLQNSISD-SPYLYAGAQGRTEILAYMLK 93

Query: 300 NHA-NCNERNHKEQIPLHLAAKCQSVECMEMLLRKGS-QVNASDCDNRTPLH-ASLSKNI 356
           +   + N+ N      L  AA+   ++ +++LL  G   ++  +    T L  A   +  
Sbjct: 94  HATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREG 153

Query: 357 LSVHPLEI---LLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMH 401
             ++  +I   L++ GA+ + +D  G + +  A     ++    L  +
Sbjct: 154 NQLY-QDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQY 200

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  137 bits (349), Expect = 3e-37
 Identities = 40/186 (21%), Positives = 76/186 (40%), Gaps = 11/186 (5%)

Query: 240 NNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLE 299
             +  + L  A  R      + + D+    VD    E   T L++A  N  +E  + L++
Sbjct: 3   TYEVGALLEAANQRDTKKVKEILQDTT-YQVDEVDTEGN-TPLNIAVHNNDIEIAKALID 60

Query: 300 NHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQ-VNASDCDNRTPLHASLSKNILS 358
             A+ N +N     P   A      E +  +L+  +  +N  +      L  +  K  + 
Sbjct: 61  RGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHID 120

Query: 359 VHPLEILLKWG-ANVNARDIFGYSPIHIAALSELSQ-----CVDCLIMHGADISSKTPSG 412
              +++LL+ G  +++ ++ FGY+ +  A             V  L+ +GAD S K  SG
Sbjct: 121 N--VKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSG 178

Query: 413 SSALSI 418
            +A+  
Sbjct: 179 RTAMDY 184

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  113 bits (285), Expect = 1e-28
 Identities = 31/149 (20%), Positives = 63/149 (42%), Gaps = 5/149 (3%)

Query: 272 IKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLL 331
           +KT E     L  A +    +   IL +     +E + +   PL++A     +E  + L+
Sbjct: 1   MKTYEVG-ALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALI 59

Query: 332 RKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGA-NVNARDIFGYSPIHIAALSE 390
            +G+ +N  +  + +P   + ++    +  L  +LK    ++N  + +G + +  AA   
Sbjct: 60  DRGADINLQNSISDSPYLYAGAQGRTEI--LAYMLKHATPDLNKHNRYGGNALIPAAEKG 117

Query: 391 LSQCVDCLIMHG-ADISSKTPSGSSALSI 418
               V  L+  G  DI  +   G +AL  
Sbjct: 118 HIDNVKLLLEDGREDIDFQNDFGYTALIE 146

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  109 bits (276), Expect = 1e-27
 Identities = 43/200 (21%), Positives = 83/200 (41%), Gaps = 21/200 (10%)

Query: 120 EKTTALLWCVFVKREDLLDALHQLGADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHGHD 176
           E    L        + + + L      +   D  G   L++A  N  I+    L+  G D
Sbjct: 5   EVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD 64

Query: 177 INFTKDSY--TPLHFAVLGNYVDCAKFLIKNKAH-IHE------TIVHSAVSTNAVDCVQ 227
           IN  ++S   +P  +A      +   +++K+    +++        +  A     +D V+
Sbjct: 65  IN-LQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVK 123

Query: 228 LLLSL-QINPNVLNNKGVSPLHIAA-----DRGLISCLKAILDSGMADVDIKTKERRVTA 281
           LLL   + + +  N+ G + L  A      ++     +K ++++G AD  IK    R TA
Sbjct: 124 LLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENG-ADQSIKDNSGR-TA 181

Query: 282 LHLAAENGYVECLRILLENH 301
           +  A + GY E  +IL + +
Sbjct: 182 MDYANQKGYTEISKILAQYN 201

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  141 bits (359), Expect = 6e-39
 Identities = 34/176 (19%), Positives = 61/176 (34%), Gaps = 9/176 (5%)

Query: 234 INPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVEC 293
           I  +    +G     I    G             ADV  + +    T    AA     + 
Sbjct: 5   IIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIA-ADVVSEYE----TPWWTAARKADEQA 59

Query: 294 LRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDC-DNRTPLHASL 352
           L  LLE   + +  +   +  L   A   S +C+ +L   G+ ++  D     T LH + 
Sbjct: 60  LSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118

Query: 353 SKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSK 408
                 V  +E L++ GA++   D  G + + +A     +      +  G  I  +
Sbjct: 119 GYVRPEV--VEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLE 172

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  130 bits (330), Expect = 5e-35
 Identities = 34/198 (17%), Positives = 61/198 (30%), Gaps = 36/198 (18%)

Query: 181 KDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLN 240
            +            +           A +                               
Sbjct: 12  GEGAMEYLIEWKDGHSPSWVPSSYIAADV------------------------------V 41

Query: 241 NKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLEN 300
           ++  +P   AA +     L  +L     DVD   +  R TAL   A  G  +C+R+L E 
Sbjct: 42  SEYETPWWTAARKADEQALSQLL-ED-RDVDAVDENGR-TALLFVAGLGSDKCVRLLAEA 98

Query: 301 HANCNERNHKE-QIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSV 359
            A+ + R+ +     LH+AA     E +E L+  G+ +   D    T L  +        
Sbjct: 99  GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREIL--KT 156

Query: 360 HPLEILLKWGANVNARDI 377
            P    +++G  +    +
Sbjct: 157 TPKGNPMQFGRRIGLEKV 174

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  127 bits (321), Expect = 8e-34
 Identities = 31/199 (15%), Positives = 65/199 (32%), Gaps = 31/199 (15%)

Query: 143 LGADLSNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFL 202
           +G+  + +      +   +G     SW+       +   +  TP   A           L
Sbjct: 6   IGSRTAGEGAMEYLIEWKDGHSP--SWVPSSYIAADVVSEYETPWWTAARKADEQALSQL 63

Query: 203 IKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAI 262
           +                               + + ++  G + L   A  G   C++ +
Sbjct: 64  L-----------EDR-----------------DVDAVDENGRTALLFVAGLGSDKCVRLL 95

Query: 263 LDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQ 322
            ++G AD+D +     +TALH+AA     E +  L+E  A+    + +    L LA +  
Sbjct: 96  AEAG-ADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREIL 154

Query: 323 SVECMEMLLRKGSQVNASD 341
                   ++ G ++    
Sbjct: 155 KTTPKGNPMQFGRRIGLEK 173

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  123 bits (311), Expect = 2e-32
 Identities = 30/186 (16%), Positives = 57/186 (30%), Gaps = 32/186 (17%)

Query: 123 TALLWCVFVKREDLLDALHQLGADLSNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTKD 182
              L                + AD+ ++       AA     +     +L   D++   D
Sbjct: 16  MEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKAD-EQALSQLLEDRDVD-AVD 73

Query: 183 SY--TPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLN 240
               T L F        C + L +  A +           +  D                
Sbjct: 74  ENGRTALLFVAGLGSDKCVRLLAEAGADL-----------DHRD---------------M 107

Query: 241 NKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLEN 300
             G++ LH+AA       ++A+++ G AD++++ +    TAL LA E          ++ 
Sbjct: 108 RGGLTALHMAAGYVRPEVVEALVELG-ADIEVEDERGL-TALELAREILKTTPKGNPMQF 165

Query: 301 HANCNE 306
                 
Sbjct: 166 GRRIGL 171

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  119 bits (300), Expect = 5e-31
 Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 7/140 (5%)

Query: 280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNA 339
               +  ++G+           A+        + P   AA+    + +  LL +   V+A
Sbjct: 16  MEYLIEWKDGHSPSWVPSSYIAADVVSEY---ETPWWTAARKADEQALSQLL-EDRDVDA 71

Query: 340 SDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDI-FGYSPIHIAALSELSQCVDCL 398
            D + RT L             + +L + GA+++ RD+  G + +H+AA     + V+ L
Sbjct: 72  VDENGRTALLFVAGLGSDKC--VRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEAL 129

Query: 399 IMHGADISSKTPSGSSALSI 418
           +  GADI  +   G +AL +
Sbjct: 130 VELGADIEVEDERGLTALEL 149

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 85.2 bits (212), Expect = 3e-19
 Identities = 23/120 (19%), Positives = 41/120 (34%), Gaps = 7/120 (5%)

Query: 300 NHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSV 359
           N    +    +  +   +  K              + V +   +  TP   +  K     
Sbjct: 3   NKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVS---EYETPWWTAARKADEQA 59

Query: 360 HPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTP-SGSSALSI 418
             L  LL+   +V+A D  G + +   A     +CV  L   GAD+  +    G +AL +
Sbjct: 60  --LSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHM 116

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  140 bits (357), Expect = 6e-39
 Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 4/164 (2%)

Query: 240 NNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLE 299
           N++    L  AA  G +  +K +      +       +  T LH AA    V  +  LL+
Sbjct: 5   NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQS-TPLHFAAGYNRVSVVEYLLQ 63

Query: 300 NHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSV 359
           + A+ + ++    +PLH A      E  E+L++ G+ VN +D    TPLH + +K    +
Sbjct: 64  HGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEI 123

Query: 360 HPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGA 403
              ++LL+ GA+   ++  G +P+ +    +     D L    A
Sbjct: 124 --CKLLLQHGADPTKKNRDGNTPLDLVKDGDT-DIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  135 bits (344), Expect = 4e-37
 Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 268 ADVDIKTKERRVTALHLAAENGYVECLRILLENH-ANCNERNHKEQIPLHLAAKCQSVEC 326
           A  + +        L  AA+ G VE ++ L      NC +   ++  PLH AA    V  
Sbjct: 2   AMGNSEAD----RQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSV 57

Query: 327 MEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIA 386
           +E LL+ G+ V+A D     PLH + S     V   E+L+K GA VN  D++ ++P+H A
Sbjct: 58  VEYLLQHGADVHAKDKGGLVPLHNACSYGHYEV--AELLVKHGAVVNVADLWKFTPLHEA 115

Query: 387 ALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRN 422
           A     +    L+ HGAD + K   G++ L ++   
Sbjct: 116 AAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDG 151

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  118 bits (298), Expect = 5e-31
 Identities = 42/193 (21%), Positives = 73/193 (37%), Gaps = 32/193 (16%)

Query: 144 GADLSNDKYGALHLAAFNGSIKGCSWLM-LHGHDIN-FTKDSYTPLHFAVLGNYVDCAKF 201
           GA  +++    L  AA  G ++    L  +   +         TPLHFA   N V   ++
Sbjct: 1   GAMGNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEY 60

Query: 202 LIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKA 261
           L+++ A +H                             +  G+ PLH A   G     + 
Sbjct: 61  LLQHGADVHAK---------------------------DKGGLVPLHNACSYGHYEVAEL 93

Query: 262 ILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKC 321
           ++  G A V++    +  T LH AA  G  E  ++LL++ A+  ++N     PL L    
Sbjct: 94  LVKHG-AVVNVADLWKF-TPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD- 150

Query: 322 QSVECMEMLLRKG 334
              +  ++L    
Sbjct: 151 GDTDIQDLLRGDA 163

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 57.0 bits (139), Expect = 1e-09
 Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 5/68 (7%)

Query: 144 GADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHGHDINF-TKDSYTPLHFAVLGNYVDCA 199
           GA +   D +    LH AA  G  + C  L+ HG D     +D  TPL     G+  D  
Sbjct: 98  GAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDGD-TDIQ 156

Query: 200 KFLIKNKA 207
             L  + A
Sbjct: 157 DLLRGDAA 164

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  140 bits (357), Expect = 7e-39
 Identities = 36/167 (21%), Positives = 67/167 (40%), Gaps = 4/167 (2%)

Query: 243 GVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHA 302
               +H  A +G +  L   ++     ++   +E   T L  AA +G +  +  LL+N A
Sbjct: 3   NSLSVHQLAAQGEMLYLATRIEQE-NVINHTDEEGF-TPLMWAAAHGQIAVVEFLLQNGA 60

Query: 303 NCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPL 362
           +        +  L LA      + ++MLL  G  VN  D +  TPL  ++  N +    +
Sbjct: 61  DPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKC--V 118

Query: 363 EILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKT 409
           ++LL+ GA+       GY+ + +A           +  H   +    
Sbjct: 119 KMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQNI 165

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  139 bits (352), Expect = 3e-38
 Identities = 37/192 (19%), Positives = 70/192 (36%), Gaps = 31/192 (16%)

Query: 185 TPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGV 244
             +H       +      I+ +                              N  + +G 
Sbjct: 5   LSVHQLAAQGEMLYLATRIEQEN---------------------------VINHTDEEGF 37

Query: 245 SPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANC 304
           +PL  AA  G I+ ++ +L +G AD  +  K R  +AL LA   GY + +++LL+   + 
Sbjct: 38  TPLMWAAAHGQIAVVEFLLQNG-ADPQLLGKGRE-SALSLACSKGYTDIVKMLLDCGVDV 95

Query: 305 NERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEI 364
           NE +     PL  A     V+C++MLL  G+            +  +++    SV   ++
Sbjct: 96  NEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSV--QQV 153

Query: 365 LLKWGANVNARD 376
           +      +    
Sbjct: 154 IESHLLKLLQNI 165

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  135 bits (344), Expect = 5e-37
 Identities = 37/189 (19%), Positives = 72/189 (38%), Gaps = 30/189 (15%)

Query: 154 ALHLAAFNGSIKGCSWLMLHGHDINFT-KDSYTPLHFAVLGNYVDCAKFLIKNKAHIHET 212
           ++H  A  G +   +  +   + IN T ++ +TPL +A     +   +FL++N A     
Sbjct: 6   SVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGA----- 60

Query: 213 IVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDI 272
                                 +P +L     S L +A  +G    +K +LD G  DV+ 
Sbjct: 61  ----------------------DPQLLGKGRESALSLACSKGYTDIVKMLLDCG-VDVNE 97

Query: 273 KTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLR 332
                  T L  A    +V+C+++LLE+ A+           + LA         +++  
Sbjct: 98  YDWNGG-TPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIES 156

Query: 333 KGSQVNASD 341
              ++  + 
Sbjct: 157 HLLKLLQNI 165

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  132 bits (334), Expect = 9e-36
 Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 2/139 (1%)

Query: 280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNA 339
            ++H  A  G +  L   +E     N  + +   PL  AA    +  +E LL+ G+    
Sbjct: 5   LSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL 64

Query: 340 SDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLI 399
                 + L  + SK    +  +++LL  G +VN  D  G +P+  A      +CV  L+
Sbjct: 65  LGKGRESALSLACSKGYTDI--VKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLL 122

Query: 400 MHGADISSKTPSGSSALSI 418
             GAD + +T SG +++ +
Sbjct: 123 ESGADPTIETDSGYNSMDL 141

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 80.9 bits (201), Expect = 7e-18
 Identities = 38/158 (24%), Positives = 59/158 (37%), Gaps = 32/158 (20%)

Query: 123 TALLWCVFVKREDLLDALHQLGADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHGHDINF 179
           T L+W     +  +++ L Q GAD     K    AL LA   G       L+  G D+N 
Sbjct: 38  TPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNE 97

Query: 180 -TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNV 238
              +  TPL +AV GN+V C K L+++ A                           +P +
Sbjct: 98  YDWNGGTPLLYAVHGNHVKCVKMLLESGA---------------------------DPTI 130

Query: 239 LNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKE 276
             + G + + +A   G  S  + I       +    KE
Sbjct: 131 ETDSGYNSMDLAVALGYRSVQQVIESHL-LKLLQNIKE 167

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  138 bits (351), Expect = 2e-37
 Identities = 32/201 (15%), Positives = 62/201 (30%), Gaps = 17/201 (8%)

Query: 200 KFLIKNKAHIHE---------TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIA 250
           + +++      +          ++  A  T  ++ VQ  +    +P+  N +G++ LH A
Sbjct: 2   RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNA 61

Query: 251 ADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHK 310
                 S +  ++ +G A+V+        T LH AA          L+++ A        
Sbjct: 62  ICGANYSIVDFLITAG-ANVNSPDSHGW-TPLHCAASCNDTVICMALVQHGAAIFATTLS 119

Query: 311 E-QIPLHLAAKCQS--VECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLK 367
           +           +    +C   L      +   +      L    S        L     
Sbjct: 120 DGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDY-SAEFGDE--LSFREG 176

Query: 368 WGANVNARDIFGYSPIHIAAL 388
               V  RD    +    AAL
Sbjct: 177 ESVTVLRRDGPEETDWWWAAL 197

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  129 bits (326), Expect = 5e-34
 Identities = 30/197 (15%), Positives = 60/197 (30%), Gaps = 11/197 (5%)

Query: 226 VQLLLSLQINPNVLNNKGVSP---LHIAADRGLISCLKAILDSGMADVDIKTKERRVTAL 282
           ++ +L    +P       ++P   L  AA  G +  ++  +     D     +E   TAL
Sbjct: 1   MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEM-NDPSQPNEEGI-TAL 58

Query: 283 HLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASD- 341
           H A        +  L+   AN N  +     PLH AA C        L++ G+ + A+  
Sbjct: 59  HNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTL 118

Query: 342 CDNRTPLH--ASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLI 399
            D  T         +          L     ++   +      +   +     + +    
Sbjct: 119 SDGATAFEKCDPYREGYADC--ATYLADVEQSMGLMNSGAVYALWDYSAEFGDE-LSFRE 175

Query: 400 MHGADISSKTPSGSSAL 416
                +  +     +  
Sbjct: 176 GESVTVLRRDGPEETDW 192

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  127 bits (322), Expect = 2e-33
 Identities = 42/235 (17%), Positives = 66/235 (28%), Gaps = 46/235 (19%)

Query: 144 GADL-SNDKYG-----ALHLAAFNGSIKGCSWLMLHGHDINF-TKDSYTPLHFAVLGNYV 196
                   +        L  AA  G ++     +   +D +   ++  T LH A+ G   
Sbjct: 8   AGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANY 67

Query: 197 DCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLI 256
               FLI   A                           N N  ++ G +PLH AA     
Sbjct: 68  SIVDFLITAGA---------------------------NVNSPDSHGWTPLHCAASCNDT 100

Query: 257 SCLKAILDSGMADVDIKTKERRVTALHLAA--ENGYVECLRILLENHANCNERNHKEQIP 314
               A++  G A +   T     TA         GY +C   L +   +    N      
Sbjct: 101 VICMALVQHG-AAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYA 159

Query: 315 LHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLH-ASL-------SKNILSVHP 361
           L   +     E +     +   V   D    T    A+L        +N   + P
Sbjct: 160 LWDYSAEFGDE-LSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNYFGLFP 213

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  111 bits (279), Expect = 9e-28
 Identities = 36/189 (19%), Positives = 59/189 (31%), Gaps = 21/189 (11%)

Query: 144 GADLSN-DKYG--ALHLAAFNGSIKGCSWLMLHGHDINFT-KDSYTPLHFAVLGNYVDCA 199
             D S  ++ G  ALH A    +     +L+  G ++N      +TPLH A   N     
Sbjct: 44  MNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVIC 103

Query: 200 KFLIKNKAHIHE-------TIVHSAVST--NAVDCVQLLLSLQINPNVLNNKGVSPLHIA 250
             L+++ A I         T             DC   L  ++ +  ++N+  V  L   
Sbjct: 104 MALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDY 163

Query: 251 ADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENG---YVECLRILLENHANCNER 307
           +            +     V  +      T    AA +G   YV   R           +
Sbjct: 164 SAEFGDELS--FREGESVTVLRRDGPEE-TDWWWAALHGQEGYVP--RNYFGLFPRVKPQ 218

Query: 308 NHKEQIPLH 316
             K +   H
Sbjct: 219 RSKVKHHHH 227

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  135 bits (344), Expect = 1e-36
 Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 12/183 (6%)

Query: 237 NVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTK-ERRVTALHLAAENGYVECLR 295
           + ++  G     I  ++ +         +   D     +     T L +A   G    + 
Sbjct: 2   SHMDKNGEIVEKIKDEKSI---------NQNLDFLRNYRDSYNRTPLMVACMLGMENAID 52

Query: 296 ILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKN 355
            L+EN     +++ +    L  A K   +   E LL KGS VN  D   +TPL  S+   
Sbjct: 53  KLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFG 112

Query: 356 ILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSA 415
              +     LL+ GANVN R++ G +P+ +A+    S+ V  L+  GADIS++  +G +A
Sbjct: 113 YSEM--SYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTA 170

Query: 416 LSI 418
            + 
Sbjct: 171 EAS 173

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  134 bits (341), Expect = 2e-36
 Identities = 40/230 (17%), Positives = 80/230 (34%), Gaps = 39/230 (16%)

Query: 174 GHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQ 233
           G  ++  K+           +      FL                               
Sbjct: 1   GSHMD--KNGEIVEKIKDEKSINQNLDFLR------------------------------ 28

Query: 234 INPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVEC 293
              N  ++   +PL +A   G+ + +  ++++    ++ K  E   TAL  A +N  +  
Sbjct: 29  ---NYRDSYNRTPLMVACMLGMENAIDKLVENF-DKLEDKDIEGS-TALIWAVKNNRLGI 83

Query: 294 LRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLS 353
              LL   +N N ++   + PL  +      E    LL  G+ VN  + +  TPL  +  
Sbjct: 84  AEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASK 143

Query: 354 KNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGA 403
                +  ++ LL+ GA+++ARD+ G +    A +    + +        
Sbjct: 144 YGRSEI--VKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVRR 191

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  132 bits (335), Expect = 1e-35
 Identities = 43/214 (20%), Positives = 78/214 (36%), Gaps = 38/214 (17%)

Query: 144 GADLSNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSY--TPLHFAVLGNYVDCAKF 201
           G+ +  +      +       +   +L       N  +DSY  TPL  A +    +    
Sbjct: 1   GSHMDKNGEIVEKIKDEKSINQNLDFL------RN-YRDSYNRTPLMVACMLGMENAIDK 53

Query: 202 LIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKA 261
           L++N                                  + +G + L  A     +   + 
Sbjct: 54  LVENFD---------------------------KLEDKDIEGSTALIWAVKNNRLGIAEK 86

Query: 262 ILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKC 321
           +L  G ++V+ K    + T L  +   GY E    LLE+ AN N+RN + + PL +A+K 
Sbjct: 87  LLSKG-SNVNTKDFSGK-TPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKY 144

Query: 322 QSVECMEMLLRKGSQVNASDCDNRTPLHASLSKN 355
              E ++ LL  G+ ++A D    T   ++    
Sbjct: 145 GRSEIVKKLLELGADISARDLTGLTAEASARIFG 178

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 57.8 bits (141), Expect = 1e-09
 Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 6/69 (8%)

Query: 144 GADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHGHDINFTKDSY--TPLHFAVLGNYVDC 198
           GA++   +  G   L +A+  G  +    L+  G DI+  +D    T    A +    + 
Sbjct: 124 GANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADIS-ARDLTGLTAEASARIFGRQEV 182

Query: 199 AKFLIKNKA 207
            K   + + 
Sbjct: 183 IKIFTEVRR 191

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  132 bits (335), Expect = 4e-36
 Identities = 37/160 (23%), Positives = 72/160 (45%), Gaps = 5/160 (3%)

Query: 242 KGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENH 301
           +    L  AA RG +  ++ +L   +   D   +  + TAL +    G       LL+  
Sbjct: 1   RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGK-TALQVMM-FGSTAIALELLKQG 58

Query: 302 ANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHP 361
           A+ N ++     P+H AA+   ++ +++L+  G+ VN  D     P+H ++ +   +V  
Sbjct: 59  ASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAV-- 116

Query: 362 LEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMH 401
           +  L    ++++ RD  G +P+ +A        VD L  H
Sbjct: 117 VSFLAA-ESDLHRRDARGLTPLELALQRGAQDLVDILQGH 155

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  114 bits (287), Expect = 1e-29
 Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 15/159 (9%)

Query: 151 KYG-ALHLAAFNGSIKGCSWLML-HGHDINFTKDSY--TPLHFAVLGNYVDCAKFLIKNK 206
           + G  L  AA  G ++    L+       +   + +  T L   + G+    A  L+K  
Sbjct: 1   RAGDRLSGAAARGDVQEVRRLLHRELVHPD-ALNRFGKTALQVMMFGS-TAIALELLKQG 58

Query: 207 AHIHE------TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLK 260
           A  +       + VH A  T  +D +++L+    + NV +  G  P+H+A   G  + + 
Sbjct: 59  ASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVS 118

Query: 261 AILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLE 299
             L +  +D+  +      T L LA + G  + + IL  
Sbjct: 119 -FLAAE-SDLHRRDARGL-TPLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 84.0 bits (209), Expect = 4e-19
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 4/106 (3%)

Query: 314 PLHLAAKCQSVECMEMLL-RKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANV 372
            L  AA    V+ +  LL R+    +A +   +T L   +  +         LLK GA+ 
Sbjct: 5   RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIA---LELLKQGASP 61

Query: 373 NARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSI 418
           N +D  G SP+H AA +     +  L+ HGAD++    +G+  + +
Sbjct: 62  NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHL 107

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 67.8 bits (167), Expect = 2e-13
 Identities = 26/98 (26%), Positives = 38/98 (38%), Gaps = 11/98 (11%)

Query: 144 GADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHGHDINF-TKDSYTPLHFAVLGNYVDCA 199
           GA     D  G   +H AA  G +     L+ HG D+N        P+H AV   +    
Sbjct: 58  GASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVV 117

Query: 200 KFLIKNKAHIHE------TIVHSAVSTNAVDCVQLLLS 231
            FL   ++ +H       T +  A+   A D V +L  
Sbjct: 118 SFLAA-ESDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 58.2 bits (142), Expect = 4e-10
 Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 4/74 (5%)

Query: 346 TPLH-ASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD 404
             L  A+   ++  V    +L +   + +A + FG + + +            L+  GA 
Sbjct: 4   DRLSGAAARGDVQEVR--RLLHRELVHPDALNRFGKTALQVMMFGST-AIALELLKQGAS 60

Query: 405 ISSKTPSGSSALSI 418
            + +  SG+S +  
Sbjct: 61  PNVQDTSGTSPVHD 74

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 54.0 bits (131), Expect = 1e-08
 Identities = 21/86 (24%), Positives = 30/86 (34%), Gaps = 5/86 (5%)

Query: 123 TALLWCVFVKREDLLDALHQLGADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHGHDINF 179
           + +         D L  L + GAD+   D  G   +HLA   G     S+L     D++ 
Sbjct: 70  SPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL-AAESDLHR 128

Query: 180 -TKDSYTPLHFAVLGNYVDCAKFLIK 204
                 TPL  A+     D    L  
Sbjct: 129 RDARGLTPLELALQRGAQDLVDILQG 154

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  131 bits (333), Expect = 7e-36
 Identities = 38/150 (25%), Positives = 59/150 (39%), Gaps = 7/150 (4%)

Query: 268 ADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECM 327
           A   ++        L  AA  G VE +R LLE  AN N  N   + P+ +     S    
Sbjct: 5   AGSSMEPSA---DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMG-SARVA 60

Query: 328 EMLLRKGSQVNASDCDNRT-PLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIA 386
           E+LL  G++ N +D    T P+H +  +  L    L +L + GA ++ RD +G  P+ +A
Sbjct: 61  ELLLLHGAEPNCADPATLTRPVHDAAREGFLDT--LVVLHRAGARLDVRDAWGRLPVDLA 118

Query: 387 ALSELSQCVDCLIMHGADISSKTPSGSSAL 416
                      L            +   A 
Sbjct: 119 EELGHRDVARYLRAAAGGTRGSNHARIDAA 148

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  119 bits (301), Expect = 2e-31
 Identities = 28/177 (15%), Positives = 53/177 (29%), Gaps = 35/177 (19%)

Query: 173 HGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSL 232
                +  + S   L  A     V+  + L++  A                         
Sbjct: 3   PAAGSS-MEPSADWLATAAARGRVEEVRALLEAGA------------------------- 36

Query: 233 QINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVE 292
             NPN  N+ G  P+ +    G     + +L  G A+ +          +H AA  G+++
Sbjct: 37  --NPNAPNSYGRRPIQVMM-MGSARVAELLLLHG-AEPNCADPATLTRPVHDAAREGFLD 92

Query: 293 CLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLH 349
            L +L    A  + R+   ++P+ LA +    +    L                   
Sbjct: 93  TLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRG-----SNHAR 144

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  117 bits (297), Expect = 5e-31
 Identities = 34/180 (18%), Positives = 58/180 (32%), Gaps = 38/180 (21%)

Query: 144 GADLS-NDKYGALHLAAFNGSIKGCSWLMLHGHDIN-FTKDSYTPLHFAVLGNYVDCAKF 201
            A  S       L  AA  G ++    L+  G + N        P+   ++G+    A+ 
Sbjct: 4   AAGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGS-ARVAEL 62

Query: 202 LIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGV-SPLHIAADRGLISCLK 260
           L+ + A                            PN  +   +  P+H AA  G +  L 
Sbjct: 63  LLLHGA---------------------------EPNCADPATLTRPVHDAAREGFLDTLV 95

Query: 261 AILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAK 320
            +  +G A +D++    R   + LA E G+ +  R L          N        + A 
Sbjct: 96  VLHRAG-ARLDVRDAWGR-LPVDLAEELGHRDVARYLRAAAGGTRGSN-----HARIDAA 148

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 92.9 bits (232), Expect = 3e-22
 Identities = 30/122 (24%), Positives = 43/122 (35%), Gaps = 6/122 (4%)

Query: 298 LENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNIL 357
           +E  A  +         L  AA    VE +  LL  G+  NA +   R P+         
Sbjct: 1   MEPAAGSSMEP--SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVM-MMGSA 57

Query: 358 SVHPLEILLKWGANVNARDIFGY-SPIHIAALSELSQCVDCLIMHGADISSKTPSGSSAL 416
            V   E+LL  GA  N  D      P+H AA       +  L   GA +  +   G   +
Sbjct: 58  RV--AELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPV 115

Query: 417 SI 418
            +
Sbjct: 116 DL 117

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 73.7 bits (182), Expect = 2e-15
 Identities = 31/150 (20%), Positives = 52/150 (34%), Gaps = 17/150 (11%)

Query: 116 ASQAEKTTALLWCVFVKREDLLDALHQLGADL-SNDKYG--ALHLAAFNGSIKGCSWLML 172
           +S       L       R + + AL + GA+  + + YG   + +    GS +    L+L
Sbjct: 7   SSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLL 65

Query: 173 HGHDINFT-KDSYT-PLHFAVLGNYVDCAKFLIKNKAHIHE------TIVHSAVSTNAVD 224
           HG + N     + T P+H A    ++D    L +  A +          V  A      D
Sbjct: 66  HGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRD 125

Query: 225 CVQLLLSLQINPNVLNNKGVSPLHIAADRG 254
             + L +           G +   I A  G
Sbjct: 126 VARYLRAAAGGTR-----GSNHARIDAAEG 150

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 43.2 bits (103), Expect = 5e-05
 Identities = 9/57 (15%), Positives = 21/57 (36%), Gaps = 2/57 (3%)

Query: 366 LKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRN 422
           ++  A  +         +  AA     + V  L+  GA+ ++    G   + ++M  
Sbjct: 1   MEPAAGSSMEP--SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMG 55

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  131 bits (332), Expect = 2e-35
 Identities = 52/151 (34%), Positives = 83/151 (54%), Gaps = 2/151 (1%)

Query: 268 ADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECM 327
           +             L  AA  G  + +RIL+ N A+ N  +     PLHLAA    +E +
Sbjct: 4   SHHHHHHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIV 63

Query: 328 EMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAA 387
           E+LL+ G+ VNA D    TPL  +     L +  +E+LLK GA+VNA D+ G++P+H+AA
Sbjct: 64  EVLLKNGADVNAVDHAGMTPLRLAALFGHLEI--VEVLLKNGADVNANDMEGHTPLHLAA 121

Query: 388 LSELSQCVDCLIMHGADISSKTPSGSSALSI 418
           +    + V+ L+ +GAD++++   G +A  I
Sbjct: 122 MFGHLEIVEVLLKNGADVNAQDKFGKTAFDI 152

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  129 bits (326), Expect = 1e-34
 Identities = 57/168 (33%), Positives = 91/168 (54%), Gaps = 7/168 (4%)

Query: 237 NVLNNKGV---SPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVEC 293
           +  ++ G      L  AA  G    ++ ++ +G ADV+ +      T LHLAA NG++E 
Sbjct: 5   HHHHHHGSDLGKKLLEAARAGRDDEVRILMANG-ADVNAEDASGW-TPLHLAAFNGHLEI 62

Query: 294 LRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLS 353
           + +LL+N A+ N  +H    PL LAA    +E +E+LL+ G+ VNA+D +  TPLH +  
Sbjct: 63  VEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAM 122

Query: 354 KNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMH 401
              L +  +E+LLK GA+VNA+D FG +   I+  +      + L   
Sbjct: 123 FGHLEI--VEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  127 bits (322), Expect = 4e-34
 Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 37/204 (18%)

Query: 164 IKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAV 223
           ++G      HG D+         L  A      D  + L+ N A                
Sbjct: 1   MRGSHHHHHHGSDLG------KKLLEAARAGRDDEVRILMANGA---------------- 38

Query: 224 DCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALH 283
                      + N  +  G +PLH+AA  G +  ++ +L +G ADV+        T L 
Sbjct: 39  -----------DVNAEDASGWTPLHLAAFNGHLEIVEVLLKNG-ADVNAVDHAGM-TPLR 85

Query: 284 LAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCD 343
           LAA  G++E + +LL+N A+ N  + +   PLHLAA    +E +E+LL+ G+ VNA D  
Sbjct: 86  LAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKF 145

Query: 344 NRTPLHASLSKNILSVHPLEILLK 367
            +T    S+      +   EIL K
Sbjct: 146 GKTAFDISIDNGNEDL--AEILQK 167

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  120 bits (305), Expect = 7e-32
 Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 36/196 (18%)

Query: 144 GADL----SNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSY--TPLHFAVLGNYVD 197
           G+       +D    L  AA  G       LM +G D+N  +D+   TPLH A    +++
Sbjct: 3   GSHHHHHHGSDLGKKLLEAARAGRDDEVRILMANGADVN-AEDASGWTPLHLAAFNGHLE 61

Query: 198 CAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLIS 257
             + L+KN A                           + N +++ G++PL +AA  G + 
Sbjct: 62  IVEVLLKNGA---------------------------DVNAVDHAGMTPLRLAALFGHLE 94

Query: 258 CLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHL 317
            ++ +L +G ADV+    E   T LHLAA  G++E + +LL+N A+ N ++   +    +
Sbjct: 95  IVEVLLKNG-ADVNANDMEGH-TPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDI 152

Query: 318 AAKCQSVECMEMLLRK 333
           +    + +  E+L + 
Sbjct: 153 SIDNGNEDLAEILQKL 168

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  130 bits (329), Expect = 3e-35
 Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 6/166 (3%)

Query: 239 LNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILL 298
           +     + L  AA RG +  L ++L +   +V+ +    R TAL +    G  E  R LL
Sbjct: 1   MAEPWGNELASAAARGDLEQLTSLLQNN-VNVNAQNGFGR-TALQVMK-LGNPEIARRLL 57

Query: 299 ENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILS 358
              AN + ++      +H AA+   ++ ++ LL   + VN  D +   PLH +  +  L 
Sbjct: 58  LRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLR 117

Query: 359 VHPLEILLKWGA-NVNARDIFGYSPIHIAALSELSQCVDCLIMHGA 403
           V  +E L+K  A NV  R+  G +   +A L   ++ V  +  +GA
Sbjct: 118 V--VEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  120 bits (304), Expect = 8e-32
 Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 12/163 (7%)

Query: 149 NDKYG-ALHLAAFNGSIKGCSWLMLHGHDINFTKDSY--TPLHFAVLGNYVDCAKFLIKN 205
            + +G  L  AA  G ++  + L+ +  ++N  ++ +  T L    LGN  + A+ L+  
Sbjct: 2   AEPWGNELASAAARGDLEQLTSLLQNNVNVN-AQNGFGRTALQVMKLGN-PEIARRLLLR 59

Query: 206 KAHIHE------TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCL 259
            A+          ++H A     +D +Q LL  Q + N+ +N+G  PLH+AA  G +  +
Sbjct: 60  GANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVV 119

Query: 260 KAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHA 302
           + ++    ++V  +  +   TA  LA   G  E + ++  N A
Sbjct: 120 EFLVKHTASNVGHRNHKGD-TACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 92.4 bits (231), Expect = 5e-22
 Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 3/103 (2%)

Query: 314 PLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVN 373
            L  AA    +E +  LL+    VNA +   RT L      N         LL  GAN +
Sbjct: 8   ELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIA---RRLLLRGANPD 64

Query: 374 ARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSAL 416
            +D  G++ IH AA +     +  L+   AD++ +   G+  L
Sbjct: 65  LKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPL 107

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 65.9 bits (162), Expect = 9e-13
 Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 3/74 (4%)

Query: 343 DNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHG 402
                L ++ ++  L    L  LL+   NVNA++ FG + + +  L    +    L++ G
Sbjct: 4   PWGNELASAAARGDLEQ--LTSLLQNNVNVNAQNGFGRTALQVMKLGNP-EIARRLLLRG 60

Query: 403 ADISSKTPSGSSAL 416
           A+   K  +G + +
Sbjct: 61  ANPDLKDRTGFAVI 74

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  128 bits (325), Expect = 5e-35
 Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 2/138 (1%)

Query: 270 VDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEM 329
           +D  T  R  T LH+A+  G +  +  LL+N ++ N ++H    PLH A     ++ +E+
Sbjct: 2   IDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVEL 61

Query: 330 LLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALS 389
           LL+  + VN +   N +PLH +     + +  +++LL +GA+ NA +IFG  P+      
Sbjct: 62  LLQHKALVNTTGYQNDSPLHDAAKNGHVDI--VKLLLSYGASRNAVNIFGLRPVDYTDDE 119

Query: 390 ELSQCVDCLIMHGADISS 407
            +   +     + +  +S
Sbjct: 120 SMKSLLLLPEKNESSSAS 137

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  112 bits (284), Expect = 2e-29
 Identities = 37/167 (22%), Positives = 66/167 (39%), Gaps = 30/167 (17%)

Query: 174 GHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQ 233
           G D        T LH A +   +   ++L++N +                          
Sbjct: 1   GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGS-------------------------- 34

Query: 234 INPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVEC 293
            +PNV ++ G +PLH A + G +  ++ +L    A V+    +   + LH AA+NG+V+ 
Sbjct: 35  -DPNVKDHAGWTPLHEACNHGHLKVVELLLQHK-ALVNTTGYQND-SPLHDAAKNGHVDI 91

Query: 294 LRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNAS 340
           +++LL   A+ N  N     P+           +  L  K    +AS
Sbjct: 92  VKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLL-LPEKNESSSAS 137

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  108 bits (272), Expect = 8e-28
 Identities = 34/163 (20%), Positives = 58/163 (35%), Gaps = 32/163 (19%)

Query: 144 GADLSNDKYG--ALHLAAFNGSIKGCSWLMLHGHDINF-TKDSYTPLHFAVLGNYVDCAK 200
           G D   +  G   LH+A+  G I    +L+ +G D N      +TPLH A    ++   +
Sbjct: 1   GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE 60

Query: 201 FLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLK 260
            L+++KA                             N    +  SPLH AA  G +  +K
Sbjct: 61  LLLQHKA---------------------------LVNTTGYQNDSPLHDAAKNGHVDIVK 93

Query: 261 AILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHAN 303
            +L  G A  +          +    +      L +  +N ++
Sbjct: 94  LLLSYG-ASRNAVNIFGL-RPVDYTDDESMKSLLLLPEKNESS 134

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  127 bits (322), Expect = 1e-34
 Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 5/138 (3%)

Query: 268 ADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECM 327
             + +         L  AA  G VE +R LLE  A+ N  N   + P+ +     S +  
Sbjct: 3   PGIHMLGGSSD-AGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVA 60

Query: 328 EMLLRKGSQVNASDCDNRT-PLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIA 386
           E+LL  G++ N +D    T P+H +  +  L    L +L + GA ++  D +G  P+ +A
Sbjct: 61  ELLLLHGAEPNCADPATLTRPVHDAAREGFLDT--LVVLHRAGARLDVCDAWGRLPVDLA 118

Query: 387 ALSELSQCVDCLIMHGAD 404
                      L     D
Sbjct: 119 EEQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  117 bits (296), Expect = 5e-31
 Identities = 28/162 (17%), Positives = 52/162 (32%), Gaps = 30/162 (18%)

Query: 174 GHDINFT-KDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSL 232
              I+     S   L  A     V+  + L++  A                         
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGA------------------------- 36

Query: 233 QINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVE 292
             +PN LN  G  P+ +    G     + +L  G A+ +          +H AA  G+++
Sbjct: 37  --DPNALNRFGRRPIQVMM-MGSAQVAELLLLHG-AEPNCADPATLTRPVHDAAREGFLD 92

Query: 293 CLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKG 334
            L +L    A  +  +   ++P+ LA +    +    L    
Sbjct: 93  TLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAAT 134

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  107 bits (269), Expect = 2e-27
 Identities = 31/164 (18%), Positives = 53/164 (32%), Gaps = 33/164 (20%)

Query: 144 GADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHGHDIN-FTKDSYTPLHFAVLGNYVDCA 199
              +          L  AA  G ++    L+  G D N   +    P+   ++G+    A
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMMGS-AQVA 60

Query: 200 KFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCL 259
           + L+ + A             N  D                     P+H AA  G +  L
Sbjct: 61  ELLLLHGAEP-----------NCAD---------------PATLTRPVHDAAREGFLDTL 94

Query: 260 KAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHAN 303
             +  +G A +D+     R   + LA E G+ +  R L     +
Sbjct: 95  VVLHRAG-ARLDVCDAWGR-LPVDLAEEQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 97.5 bits (244), Expect = 5e-24
 Identities = 28/118 (23%), Positives = 39/118 (33%), Gaps = 4/118 (3%)

Query: 302 ANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHP 361
              +         L  AA    VE +  LL  G+  NA +   R P+          V  
Sbjct: 3   PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVM-MMGSAQV-- 59

Query: 362 LEILLKWGANVNARDIFGY-SPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSI 418
            E+LL  GA  N  D      P+H AA       +  L   GA +      G   + +
Sbjct: 60  AELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDL 117

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 69.8 bits (172), Expect = 2e-14
 Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 3/80 (3%)

Query: 334 GSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQ 393
              ++     +   L  + ++  +    +  LL+ GA+ NA + FG  PI +  +    Q
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVET--VRQLLEAGADPNALNRFGRRPIQVMMMGSA-Q 58

Query: 394 CVDCLIMHGADISSKTPSGS 413
             + L++HGA+ +   P+  
Sbjct: 59  VAELLLLHGAEPNCADPATL 78

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 50.9 bits (123), Expect = 1e-07
 Identities = 9/54 (16%), Positives = 20/54 (37%)

Query: 369 GANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRN 422
              ++       + +  AA     + V  L+  GAD ++    G   + ++M  
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMMG 55

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  126 bits (318), Expect = 2e-33
 Identities = 18/177 (10%), Positives = 53/177 (29%), Gaps = 14/177 (7%)

Query: 245 SPLHIAADRGLISCLKAILDSGMADVDIKTKERRV--TALHLAAENGYVECLRILLENHA 302
             +  AA  G       + + G  +      +  +    L    +    +    L+   A
Sbjct: 8   RTVSAAAMLGTYEDFLELFEKG-YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGA 66

Query: 303 NCNERNHKEQIPLHLAAKC------QSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNI 356
           +   R  +         +        + E  ++ L KG+ + A     +  +  ++    
Sbjct: 67  DIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYF 126

Query: 357 LSVHPLE-----ILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSK 408
           +  + +      I  + G  +  +D +G + +      +    +  +  +    + K
Sbjct: 127 VDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLK 183

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  117 bits (294), Expect = 3e-30
 Identities = 24/205 (11%), Positives = 55/205 (26%), Gaps = 38/205 (18%)

Query: 150 DKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHI 209
            +Y  +  AA  G+ +    L   G++   +      L+  +                  
Sbjct: 5   SEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVL------------------ 46

Query: 210 HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRG------LISCLKAIL 263
                 +            L++   +      +G +        G           K  L
Sbjct: 47  -----RNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFL 101

Query: 264 DSGMADVDIKTKERRVTALHLAAENGYVECLR-------ILLENHANCNERNHKEQIPLH 316
           + G AD+    K  +   +     N +V+          I  ++      ++      L 
Sbjct: 102 EKG-ADITALYKPYK-IVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALE 159

Query: 317 LAAKCQSVECMEMLLRKGSQVNASD 341
              +CQ    ++M+     + N  +
Sbjct: 160 FVKRCQKPIALKMMEDYIKKYNLKE 184

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  110 bits (278), Expect = 4e-28
 Identities = 30/181 (16%), Positives = 51/181 (28%), Gaps = 20/181 (11%)

Query: 212 TIVHSAVSTNAVDCVQLLLSLQINPNVLNNK---GVSPLHIAADRGLISCLKAILDSGMA 268
             V +A      +    L            K       L    D         +++ G A
Sbjct: 8   RTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKG-A 66

Query: 269 DVDIKTKERRVTALHLAAENGY------VECLRILLENHANCNERNHKEQIPLHLAAKCQ 322
           D+  +TKE   T      + G        E  +I LE  A+        +I +       
Sbjct: 67  DIKSRTKEGT-TLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNY 125

Query: 323 SVECMEM-------LLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNAR 375
            V+  EM         + G Q+   D    T L             L+++  +    N +
Sbjct: 126 FVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIA--LKMMEDYIKKYNLK 183

Query: 376 D 376
           +
Sbjct: 184 E 184

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  107 bits (270), Expect = 5e-27
 Identities = 24/153 (15%), Positives = 42/153 (27%), Gaps = 14/153 (9%)

Query: 280 TALHLAAENGYVECLRILLENHANCNERNHKE---QIPLHLAAKCQSVECMEMLLRKGSQ 336
             +  AA  G  E    L E      E   K       L         +    L+ KG+ 
Sbjct: 8   RTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGAD 67

Query: 337 VNASDCDNRTPLHASLSKN----ILSVHPLEILLKWGANVNARDIFGYSPIHIAALS--- 389
           + +   +  T               +    +I L+ GA++ A        +     +   
Sbjct: 68  IKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFV 127

Query: 390 ---ELSQCVDCLIMH-GADISSKTPSGSSALSI 418
              E+      +    G  +  K   G +AL  
Sbjct: 128 DENEMIPLYKLIFSQSGLQLLIKDKWGLTALEF 160

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  104 bits (261), Expect = 8e-26
 Identities = 26/202 (12%), Positives = 47/202 (23%), Gaps = 35/202 (17%)

Query: 120 EKTTALLWCVFVKREDLLDALHQLGADLSNDKYG------ALHLAAFNGSIKGCSWLMLH 173
            +   +     +   +    L + G +              L         K   +L+  
Sbjct: 5   SEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINK 64

Query: 174 GHDINF-TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSL 232
           G DI   TK+  T       G   D                          +  ++ L  
Sbjct: 65  GADIKSRTKEGTTLFFPLFQGGGNDITG---------------------TTELCKIFLEK 103

Query: 233 QINPNVLNNKGVSPLHIAADRG------LISCLKAILDSGMADVDIKTKERRVTALHLAA 286
             +   L       +             +I   K I       + IK K    TAL    
Sbjct: 104 GADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGL-TALEFVK 162

Query: 287 ENGYVECLRILLENHANCNERN 308
                  L+++ +     N + 
Sbjct: 163 RCQKPIALKMMEDYIKKYNLKE 184

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 77.0 bits (190), Expect = 2e-16
 Identities = 20/117 (17%), Positives = 38/117 (32%), Gaps = 9/117 (7%)

Query: 314 PLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPL--EILLKWGAN 371
            +  AA   + E    L  KG +   S       L+  L  N           L+  GA+
Sbjct: 9   TVSAAAMLGTYEDFLELFEKGYEDKESV-LKSNILYDVLRNNNDEARYKISMFLINKGAD 67

Query: 372 VNARDIFGYSPIHIAA------LSELSQCVDCLIMHGADISSKTPSGSSALSIIMRN 422
           + +R   G +            ++  ++     +  GADI++        +   + N
Sbjct: 68  IKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFN 124

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 60.1 bits (146), Expect = 2e-10
 Identities = 20/142 (14%), Positives = 38/142 (26%), Gaps = 23/142 (16%)

Query: 123 TALLWCVFVKREDLLDALHQLGADL-SNDKYG--ALHLAAFNG------SIKGCSWLMLH 173
             L       R  +   L   GAD+ S  K G          G      + + C   +  
Sbjct: 44  DVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEK 103

Query: 174 GHDINFT-KDSYTPLHFAVLGNYVDCAK-------FLIKNKAHIH------ETIVHSAVS 219
           G DI    K     +   +   +VD  +          ++   +        T +     
Sbjct: 104 GADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKR 163

Query: 220 TNAVDCVQLLLSLQINPNVLNN 241
                 ++++       N+  N
Sbjct: 164 CQKPIALKMMEDYIKKYNLKEN 185

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 50.4 bits (121), Expect = 4e-07
 Identities = 13/88 (14%), Positives = 27/88 (30%), Gaps = 7/88 (7%)

Query: 339 ASDCDNRTPLH-ASLSKNILSVHPLEILLKWGANV---NARDIFGYSPIHIAALSELSQC 394
           ++       +  A++            L + G        +    Y  +         + 
Sbjct: 1   SNAMSEYRTVSAAAMLGTYEDF---LELFEKGYEDKESVLKSNILYDVLRNNNDEARYKI 57

Query: 395 VDCLIMHGADISSKTPSGSSALSIIMRN 422
              LI  GADI S+T  G++    + + 
Sbjct: 58  SMFLINKGADIKSRTKEGTTLFFPLFQG 85

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  124 bits (315), Expect = 2e-33
 Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 3/139 (2%)

Query: 280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNA 339
             L  AA  G  + +RIL+ N A     +     PLHLAA+       E+LLR G   +A
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTT-DWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA 62

Query: 340 SDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLI 399
               +RTPLH + S+   ++  +E+LLK GA+VNA+D+   + +H A      + V+ LI
Sbjct: 63  RTKVDRTPLHMAASEGHANI--VEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLI 120

Query: 400 MHGADISSKTPSGSSALSI 418
            +GAD+ +++    +A  I
Sbjct: 121 KYGADVHTQSKFCKTAFDI 139

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  124 bits (314), Expect = 3e-33
 Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 5/142 (3%)

Query: 246 PLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCN 305
            L  AA  G    ++ ++ +G       T     + LHLAA+ G+     +LL    + +
Sbjct: 5   KLLEAARAGQDDEVRILMANG---APFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD 61

Query: 306 ERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEIL 365
            R   ++ PLH+AA       +E+LL+ G+ VNA D    T LH +   N   V  +E+L
Sbjct: 62  ARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEV--VELL 119

Query: 366 LKWGANVNARDIFGYSPIHIAA 387
           +K+GA+V+ +  F  +   I+ 
Sbjct: 120 IKYGADVHTQSKFCKTAFDISI 141

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  124 bits (314), Expect = 3e-33
 Identities = 35/177 (19%), Positives = 67/177 (37%), Gaps = 29/177 (16%)

Query: 154 ALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETI 213
            L  AA  G       LM +G          +PLH A    +    + L++         
Sbjct: 5   KLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGV------ 58

Query: 214 VHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIK 273
                                + +       +PLH+AA  G  + ++ +L  G ADV+ K
Sbjct: 59  ---------------------SRDARTKVDRTPLHMAASEGHANIVEVLLKHG-ADVNAK 96

Query: 274 TKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEML 330
              +  TALH A E+ + E + +L++  A+ + ++   +    ++    + +  E+L
Sbjct: 97  DMLKM-TALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  122 bits (309), Expect = 1e-32
 Identities = 42/174 (24%), Positives = 69/174 (39%), Gaps = 30/174 (17%)

Query: 182 DSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNN 241
           D    L  A      D  + L+ N A                                + 
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPF-----------TT-----------------DW 32

Query: 242 KGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENH 301
            G SPLH+AA  G  S  + +L +G    D +TK  R T LH+AA  G+   + +LL++ 
Sbjct: 33  LGTSPLHLAAQYGHFSTTEVLLRAG-VSRDARTKVDR-TPLHMAASEGHANIVEVLLKHG 90

Query: 302 ANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKN 355
           A+ N ++  +   LH A +    E +E+L++ G+ V+      +T    S+   
Sbjct: 91  ADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNG 144

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  105 bits (266), Expect = 9e-27
 Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 32/178 (17%)

Query: 123 TALLWCVFVKREDLLDALHQLGADLSNDKYG--ALHLAAFNGSIKGCSWLMLHGHDINF- 179
             LL      ++D +  L   GA  + D  G   LHLAA  G       L+  G   +  
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63

Query: 180 TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVL 239
           TK   TPLH A    + +  + L+K+ A                           + N  
Sbjct: 64  TKVDRTPLHMAASEGHANIVEVLLKHGA---------------------------DVNAK 96

Query: 240 NNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRIL 297
           +   ++ LH A +      ++ ++  G ADV  ++K  + TA  ++ +NG  +   IL
Sbjct: 97  DMLKMTALHWATEHNHQEVVELLIKYG-ADVHTQSKFCK-TAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 61.6 bits (151), Expect = 2e-11
 Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 3/74 (4%)

Query: 343 DNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHG 402
           D    L  +          + IL+  GA     D  G SP+H+AA        + L+  G
Sbjct: 1   DLGKKLLEAARAGQDDE--VRILMANGAPFTT-DWLGTSPLHLAAQYGHFSTTEVLLRAG 57

Query: 403 ADISSKTPSGSSAL 416
               ++T    + L
Sbjct: 58  VSRDARTKVDRTPL 71

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  116 bits (294), Expect = 8e-31
 Identities = 52/124 (41%), Positives = 81/124 (65%), Gaps = 2/124 (1%)

Query: 280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNA 339
           T LHLAA NG++E +++LLE  A+ N ++   + PLHLAA+   +E +++LL  G+ VNA
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63

Query: 340 SDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLI 399
            D + RTPLH +     L V  +++LL+ GA+VNA+D  G +P+H+AA +   + V  L+
Sbjct: 64  KDKNGRTPLHLAARNGHLEV--VKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121

Query: 400 MHGA 403
             GA
Sbjct: 122 EAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  102 bits (256), Expect = 1e-25
 Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 29/153 (18%)

Query: 182 DSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNN 241
           +  TPLH A    +++  K L++  A                           + N  + 
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGA---------------------------DVNAKDK 33

Query: 242 KGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENH 301
            G +PLH+AA  G +  +K +L++G ADV+ K K  R T LHLAA NG++E +++LLE  
Sbjct: 34  NGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGR-TPLHLAARNGHLEVVKLLLEAG 91

Query: 302 ANCNERNHKEQIPLHLAAKCQSVECMEMLLRKG 334
           A+ N ++   + PLHLAA+   +E +++LL  G
Sbjct: 92  ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 124

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 93.6 bits (234), Expect = 9e-23
 Identities = 42/105 (40%), Positives = 68/105 (64%), Gaps = 2/105 (1%)

Query: 314 PLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVN 373
           PLHLAA+   +E +++LL  G+ VNA D + RTPLH +     L V  +++LL+ GA+VN
Sbjct: 5   PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEV--VKLLLEAGADVN 62

Query: 374 ARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSI 418
           A+D  G +P+H+AA +   + V  L+  GAD+++K  +G + L +
Sbjct: 63  AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHL 107

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 86.2 bits (215), Expect = 3e-20
 Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 14/118 (11%)

Query: 154 ALHLAAFNGSIKGCSWLMLHGHDINF-TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE- 211
            LHLAA NG ++    L+  G D+N   K+  TPLH A    +++  K L++  A ++  
Sbjct: 5   PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAK 64

Query: 212 -----TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRG-------LIS 257
                T +H A     ++ V+LLL    + N  +  G +PLH+AA  G       L+ 
Sbjct: 65  DKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 122

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 62.0 bits (152), Expect = 1e-11
 Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 144 GADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHGHDINF-TKDSYTPLHFAVLGNYVDCA 199
           GAD+ + DK G   LHLAA NG ++    L+  G D+N   K+  TPLH A    +++  
Sbjct: 58  GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVV 117

Query: 200 KFLIKNKAH 208
           K L++  A+
Sbjct: 118 KLLLEAGAY 126

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score =  122 bits (307), Expect = 1e-30
 Identities = 48/327 (14%), Positives = 109/327 (33%), Gaps = 65/327 (19%)

Query: 87  KMSSGDVNVLYAIENSLYEPDEMATLFSKASQAEKTTALLWCVFVKREDLLDALHQLGAD 146
              S  + ++ A+ + +   +E         + +    L   +F + +++  +L+   ++
Sbjct: 37  DFLSSPLKIMKALPSPVVNDNE--------QKMKLEAFLQRLLFPEIQEMPTSLNNDSSN 88

Query: 147 LSNDKY----GALHLAAFNGSIKGCSWLMLHGHDINFTKDSY--TPLHFAVLGNYVDCAK 200
            +++         H++  +   +          ++N   D +  TPLH+      ++  K
Sbjct: 89  RNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVK 148

Query: 201 FLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRG---LIS 257
            L+K+ +                           N    +N G S L  A          
Sbjct: 149 HLVKHGS---------------------------NRLYGDNMGESCLVKAVKSVNNYDSG 181

Query: 258 CLKAILDSGMADVDIKTKERRVTALHLAAE-----------NGYVEC-LRILLENHANCN 305
             +A+LD     + ++    R T LH                 Y++  +  +++      
Sbjct: 182 TFEALLDYLYPCLILEDSMNR-TILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPI 240

Query: 306 ERNHKEQIPLHLAAKCQSVECMEMLL----RKGSQVNASDCDNRTPLH-ASLSKNILSVH 360
           +    E+         +  + +   L       + +NA D +  T L+ A+   NI  V 
Sbjct: 241 QSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIV- 299

Query: 361 PLEILLKWGANVNARDIFGYSPIHIAA 387
             + LL +GA+    +  G  P+   A
Sbjct: 300 --DALLDYGADPFIANKSGLRPVDFGA 324

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score =  111 bits (279), Expect = 7e-27
 Identities = 35/231 (15%), Positives = 71/231 (30%), Gaps = 18/231 (7%)

Query: 210 HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMAD 269
            E  +   +     +    L +   N N             +   L+  +     +   +
Sbjct: 63  LEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLN 122

Query: 270 VDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAK---CQSVEC 326
           ++I   E   T LH       +E ++ L+++ +N    ++  +  L  A K         
Sbjct: 123 LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGT 182

Query: 327 MEMLLRK-GSQVNASDCDNRTPLH------ASLSKNILSVHPLEILLKW----GANVNAR 375
            E LL      +   D  NRT LH           +  + + L+IL+ W           
Sbjct: 183 FEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQS 242

Query: 376 DIFGYSPIHIAALSELSQC----VDCLIMHGADISSKTPSGSSALSIIMRN 422
                         E        +D   +    ++++  +G + L+I  R 
Sbjct: 243 GTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARL 293

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  117 bits (295), Expect = 2e-29
 Identities = 45/299 (15%), Positives = 85/299 (28%), Gaps = 69/299 (23%)

Query: 143 LGADLSN-DKYG--ALHLAAFNGSIKGCS-------WLMLHGHDINFTKDSY--TPLHFA 190
           + A       Y   ++  A    + +                 D  F       T L  A
Sbjct: 2   VSAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKA 61

Query: 191 VL---GNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPL 247
           +L       D    L+                    D ++  ++   +      KG + L
Sbjct: 62  MLNLHNGQNDTIALLLDVARKT--------------DSLKQFVN--ASYTDSYYKGQTAL 105

Query: 248 HIAADRGLISCLKAILDSGMADVDIKTKERRV-------------TALHLAAENGYVECL 294
           HIA +R  ++ +  ++++G ADV                        L LAA    +  +
Sbjct: 106 HIAIERRNMTLVTLLVENG-ADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIV 164

Query: 295 RILLEN---HANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHAS 351
           + LL+N    A+ + R+      LH   +                  A +  + T    S
Sbjct: 165 KFLLQNSWQPADISARDSVGNTVLHALVE-----------------VADNTVDNTKFVTS 207

Query: 352 LSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTP 410
           +   IL +     L          +  G +P+ +AA S     +  ++           
Sbjct: 208 MYNEILILGAK--LHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIH--EPEC 262

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  111 bits (278), Expect = 3e-27
 Identities = 36/222 (16%), Positives = 76/222 (34%), Gaps = 44/222 (19%)

Query: 231 SLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGM------ADVDIKTKERRVTALHL 284
           S+              +  A  +     L+++L           D + K  E   T L  
Sbjct: 1   SVSAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLK 60

Query: 285 AAEN---GYVECLRILLEN-----------HANCNERNHKEQIPLHLAAKCQSVECMEML 330
           A  N   G  + + +LL+            +A+  +  +K Q  LH+A + +++  + +L
Sbjct: 61  AMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLL 120

Query: 331 LRKGSQVNASDCDNRTPLHASLSKNILSVHPL------------EILLKWG---ANVNAR 375
           +  G+ V A+   +                PL            + LL+     A+++AR
Sbjct: 121 VENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISAR 180

Query: 376 DIFGYSPIHIAALSE---------LSQCVDCLIMHGADISSK 408
           D  G + +H               ++   + +++ GA +   
Sbjct: 181 DSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPT 222

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  110 bits (276), Expect = 6e-27
 Identities = 46/262 (17%), Positives = 78/262 (29%), Gaps = 72/262 (27%)

Query: 123 TALLWCVFVKR----EDLLDALHQLGA-----DLSNDKYG--ALHLAAFN---GSIKGCS 168
            ++   V        E LL  L +        +  + + G   L  A  N   G     +
Sbjct: 15  RSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIA 74

Query: 169 WLMLHGHDINFTKDS------------YTPLHFAVLGNYVDCAKFLIKNKAHIH------ 210
            L+      +  K               T LH A+    +     L++N A +       
Sbjct: 75  LLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGD 134

Query: 211 --------------ETIVHSAVSTNAVDCVQLLLS---LQINPNVLNNKGVSPLHIAADR 253
                         E  +  A  TN +  V+ LL       + +  ++ G + LH   + 
Sbjct: 135 FFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEV 194

Query: 254 G---------------LISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILL 298
                            I  L A L   +   +I  ++   T L LAA +G +  L  +L
Sbjct: 195 ADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGL-TPLALAASSGKIGVLAYIL 253

Query: 299 ENHANCNERNHKEQIPLHLAAK 320
           +   +  E         H AA 
Sbjct: 254 QREIHEPE-------CRHAAAH 268

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 83.3 bits (206), Expect = 9e-18
 Identities = 42/225 (18%), Positives = 65/225 (28%), Gaps = 66/225 (29%)

Query: 123 TALLWCVFVKREDLLDA---LHQLGADL------------SNDKYG--ALHLAAFNGSIK 165
           T LL  +        D    L  +                 +   G  ALH+A    ++ 
Sbjct: 56  TCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMT 115

Query: 166 GCSWLMLHGHDIN---------------FTKDSYTPLHFAVLGNYVDCAKFLIKN---KA 207
             + L+ +G D+                       PL  A   N +   KFL++N    A
Sbjct: 116 LVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPA 175

Query: 208 HIHE------TIVHSAVS----------------TNAVDCVQLLLSLQINPNVLNNKGVS 245
            I        T++H+ V                    +     L        + N KG++
Sbjct: 176 DISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLT 235

Query: 246 PLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGY 290
           PL +AA  G I  L  IL                   H AA + +
Sbjct: 236 PLALAASSGKIGVLAYILQRE-IHEP--------ECRHAAAHHHH 271

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 65.6 bits (160), Expect = 9e-12
 Identities = 21/131 (16%), Positives = 42/131 (32%), Gaps = 20/131 (15%)

Query: 302 ANCNERNHKEQIPLHLAAKCQSVECMEMLLR-------KGSQVNASDCDN-RTPLH-ASL 352
           A        ++  +  A    + + +E LL        + +     D +  +T L  A L
Sbjct: 4   AGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAML 63

Query: 353 SKNILSVHPLEILLKWGA-----------NVNARDIFGYSPIHIAALSELSQCVDCLIMH 401
           + +      + +LL               +       G + +HIA        V  L+ +
Sbjct: 64  NLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVEN 123

Query: 402 GADISSKTPSG 412
           GAD+ +     
Sbjct: 124 GADVQAAANGD 134

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  111 bits (280), Expect = 4e-29
 Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 2/108 (1%)

Query: 280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNA 339
                A +NG ++ ++  +    + N      + PLH AA C  +E +E LL KG+ +NA
Sbjct: 9   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 68

Query: 340 SDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAA 387
            D  + TPL +++ +  +S   +++LL  GA+   +   G +      
Sbjct: 69  PDKHHITPLLSAVYEGHVSC--VKLLLSKGADKTVKGPDGLTAFEATD 114

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  104 bits (262), Expect = 1e-26
 Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 2/121 (1%)

Query: 239 LNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILL 298
           L +        A   G +  +K  +  G  DV+   +  R   LH AA+ G +E L  LL
Sbjct: 3   LGSMCDKEFMWALKNGDLDEVKDYVAKG-EDVNRTLEGGR-KPLHYAADCGQLEILEFLL 60

Query: 299 ENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILS 358
              A+ N  +     PL  A     V C+++LL KG+       D  T   A+ ++ I +
Sbjct: 61  LKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKA 120

Query: 359 V 359
           +
Sbjct: 121 L 121

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 95.5 bits (239), Expect = 2e-23
 Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 2/105 (1%)

Query: 314 PLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVN 373
               A K   ++ ++  + KG  VN +    R PLH +     L +  LE LL  GA++N
Sbjct: 10  EFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEI--LEFLLLKGADIN 67

Query: 374 ARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSI 418
           A D    +P+  A       CV  L+  GAD + K P G +A   
Sbjct: 68  APDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEA 112

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 94.8 bits (237), Expect = 3e-23
 Identities = 27/140 (19%), Positives = 43/140 (30%), Gaps = 29/140 (20%)

Query: 181 KDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLN 240
                   +A+    +D  K  +                               + N   
Sbjct: 5   SMCDKEFMWALKNGDLDEVKDYVAKGE---------------------------DVNRTL 37

Query: 241 NKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLEN 300
             G  PLH AAD G +  L+ +L  G AD++   K    T L  A   G+V C+++LL  
Sbjct: 38  EGGRKPLHYAADCGQLEILEFLLLKG-ADINAPDKHHI-TPLLSAVYEGHVSCVKLLLSK 95

Query: 301 HANCNERNHKEQIPLHLAAK 320
            A+   +             
Sbjct: 96  GADKTVKGPDGLTAFEATDN 115

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 82.8 bits (206), Expect = 5e-19
 Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 7/115 (6%)

Query: 147 LSNDKYGALHLAAFNGSIKGCSWLMLHGHDINFT-KDSYTPLHFAVLGNYVDCAKFLIKN 205
           L +        A  NG +      +  G D+N T +    PLH+A     ++  +FL+  
Sbjct: 3   LGSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLK 62

Query: 206 KAHIHE------TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRG 254
            A I+       T + SAV    V CV+LLLS   +  V    G++      ++ 
Sbjct: 63  GADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQA 117

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  110 bits (279), Expect = 9e-29
 Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 2/122 (1%)

Query: 280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNA 339
             L  AA  G  + +RIL+ N A+ N ++     PL+LA     +E +E+LL+ G+ VNA
Sbjct: 16  KKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNA 75

Query: 340 SDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLI 399
            D    TPLH +     L +   E+LLK GA+VNA+D FG +   I+  +      + L 
Sbjct: 76  VDAIGFTPLHLAAFIGHLEI--AEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQ 133

Query: 400 MH 401
             
Sbjct: 134 KL 135

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 99.0 bits (248), Expect = 1e-24
 Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 14/144 (9%)

Query: 164 IKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE------TIVHSA 217
           ++G      HG D+         L  A      D  + L+ N A ++       T ++ A
Sbjct: 1   MRGSHHHHHHGSDLG------KKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLA 54

Query: 218 VSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKER 277
            +   ++ V++LL    + N ++  G +PLH+AA  G +   + +L  G ADV+ + K  
Sbjct: 55  TAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHG-ADVNAQDKFG 113

Query: 278 RVTALHLAAENGYVECLRILLENH 301
           + TA  ++  NG  +   IL + +
Sbjct: 114 K-TAFDISIGNGNEDLAEILQKLN 136

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 95.5 bits (239), Expect = 2e-23
 Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 9/123 (7%)

Query: 296 ILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKN 355
               + ++  +        L  AA+    + + +L+  G+ VNA D    TPL+ + +  
Sbjct: 6   HHHHHGSDLGK-------KLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHG 58

Query: 356 ILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSA 415
            L +  +E+LLK GA+VNA D  G++P+H+AA     +  + L+ HGAD++++   G +A
Sbjct: 59  HLEI--VEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTA 116

Query: 416 LSI 418
             I
Sbjct: 117 FDI 119

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 89.0 bits (222), Expect = 5e-21
 Identities = 32/134 (23%), Positives = 55/134 (41%), Gaps = 22/134 (16%)

Query: 144 GADLSNDKYGA-----LHLAAFNGSIKGCSWLMLHGHDINFTKDSY--TPLHFAVLGNYV 196
           G+   +  +G+     L  AA  G       LM +G D+N  KD Y  TPL+ A    ++
Sbjct: 3   GSHH-HHHHGSDLGKKLLEAARAGQDDEVRILMANGADVN-AKDEYGLTPLYLATAHGHL 60

Query: 197 DCAKFLIKNKAHIHE------TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIA 250
           +  + L+KN A ++       T +H A     ++  ++LL    + N  +  G +   I+
Sbjct: 61  EIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDIS 120

Query: 251 ADRG-------LIS 257
              G       L  
Sbjct: 121 IGNGNEDLAEILQK 134

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  106 bits (268), Expect = 2e-27
 Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 3/114 (2%)

Query: 271 DIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEML 330
              +K+   T LH AA+NG+ E ++ LL   A+ N R+     PLHLAAK    E +++L
Sbjct: 3   MWGSKDGN-TPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLL 61

Query: 331 LRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIH 384
           L KG+ VNA   D  TP H +       +  +++L   GA+VNAR        H
Sbjct: 62  LAKGADVNARSKDGNTPEHLAKKNGHHEI--VKLLDAKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  100 bits (253), Expect = 1e-25
 Identities = 39/143 (27%), Positives = 60/143 (41%), Gaps = 30/143 (20%)

Query: 174 GHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQ 233
           GH    +KD  TPLH A    + +  K L+   A                          
Sbjct: 1   GHMWG-SKDGNTPLHNAAKNGHAEEVKKLLSKGA-------------------------- 33

Query: 234 INPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVEC 293
            + N  +  G +PLH+AA  G    +K +L  G ADV+ ++K+   T  HLA +NG+ E 
Sbjct: 34  -DVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG-ADVNARSKDGN-TPEHLAKKNGHHEI 90

Query: 294 LRILLENHANCNERNHKEQIPLH 316
           +++L    A+ N R+       H
Sbjct: 91  VKLLDAKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 95.5 bits (239), Expect = 1e-23
 Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 2/103 (1%)

Query: 314 PLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVN 373
           PLH AAK    E ++ LL KG+ VNA   D  TPLH +       +  +++LL  GA+VN
Sbjct: 12  PLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEI--VKLLLAKGADVN 69

Query: 374 ARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSAL 416
           AR   G +P H+A  +   + V  L   GAD+++++   S   
Sbjct: 70  ARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 87.8 bits (219), Expect = 6e-21
 Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 10/114 (8%)

Query: 144 GADLSNDKYG--ALHLAAFNGSIKGCSWLMLHGHDINF-TKDSYTPLHFAVLGNYVDCAK 200
           G      K G   LH AA NG  +    L+  G D+N  +KD  TPLH A    + +  K
Sbjct: 1   GHMW-GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVK 59

Query: 201 FLIKNKAHIHE------TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLH 248
            L+   A ++       T  H A      + V+LL +   + N  +       H
Sbjct: 60  LLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHH 113

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score =  111 bits (279), Expect = 2e-27
 Identities = 40/246 (16%), Positives = 73/246 (29%), Gaps = 51/246 (20%)

Query: 211 ETIVHSAVSTNAV----DCVQLLLSLQINPNVLNNK----GVSPLHIAADRG-------- 254
             I+   VS  +       +  LL+ +        +    G + L  A            
Sbjct: 6   RPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTI 65

Query: 255 --LISCLKAILDSG-MADVDIKTKERR-VTALHLAAENGYVECLRILLENHANCNERNHK 310
             L+   +   +     +   +    R  TALH+A E      + +L+E  A+ + +   
Sbjct: 66  PILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARG 125

Query: 311 E--------------QIPLHLAAKCQSVECMEMLLRKGSQ---VNASDCDNRTPLHA--- 350
                          ++PL LAA       +  L   G +   +   D    T LHA   
Sbjct: 126 RFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVA 185

Query: 351 ----SLSKNILSVHPLEILLKWGANVNA-------RDIFGYSPIHIAALSELSQCVDCLI 399
               +           ++LL   A +          +  G SP+ +AA +        +I
Sbjct: 186 IADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHII 245

Query: 400 MHGADI 405
                 
Sbjct: 246 RREIAD 251

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score =  102 bits (257), Expect = 1e-24
 Identities = 42/257 (16%), Positives = 71/257 (27%), Gaps = 60/257 (23%)

Query: 134 EDLLDALHQLGADLSNDK------YG--ALHLAAFN---GSIKGCSWLMLHGHDINFTKD 182
           E LL  L      L  D+       G   L  A  N   G       L+         ++
Sbjct: 22  EGLLSFLLTHKKRL-TDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMRE 80

Query: 183 S------------YTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLL 230
                         T LH A+        + L++  A +H                +   
Sbjct: 81  FINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQ-------------ARGRF 127

Query: 231 SLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSG--MADVDIKTKERRVTALHLAAEN 288
               +       G  PL +AA       +  + ++G   AD+  +      T LH     
Sbjct: 128 FQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGN-TVLHALVAI 186

Query: 289 G---------YVECLRILLENHANCNERNHKEQI-------PLHLAAKCQSVECMEMLLR 332
                       +   +LL   A      + E +       PL +AAK   +   + ++R
Sbjct: 187 ADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIR 246

Query: 333 KGSQVNASDCDNRTPLH 349
           +     A+        H
Sbjct: 247 REIADAAA----HHHHH 259

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 97.9 bits (244), Expect = 9e-23
 Identities = 36/211 (17%), Positives = 72/211 (34%), Gaps = 48/211 (22%)

Query: 246 PLHIAADRGLISCLKAILD---SGMADVDIKTKERRV---TALHLAAEN---GYVECLRI 296
            L     RG    L+ +L    +    +  +         T L  A  N   G  + + I
Sbjct: 8   ILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPI 67

Query: 297 LLEN-----------HANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN- 344
           LL+            ++   +  ++ Q  LH+A + +    +E+L+ KG+ V+A      
Sbjct: 68  LLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRF 127

Query: 345 -------------RTPLHASLSKNILSVHPLEILLKWG---ANVNARDIFGYSPIHIAAL 388
                          PL  +   N   +  +  L + G   A++  +D  G + +H    
Sbjct: 128 FQPKDEGGYFYFGELPLSLAACTNQPHI--VHYLTENGHKQADLRRQDSRGNTVLHALVA 185

Query: 389 SE---------LSQCVDCLIMHGADISSKTP 410
                      +++  D L++  A +   T 
Sbjct: 186 IADNTRENTKFVTKMYDLLLIKCAKLFPDTN 216

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 86.4 bits (214), Expect = 8e-19
 Identities = 31/234 (13%), Positives = 57/234 (24%), Gaps = 72/234 (30%)

Query: 123 TALLWCVFVKREDLLDA---LHQLGADLSN------------DKYG--ALHLAAFNGSIK 165
           T L   +        D    L  +     N               G  ALH+A       
Sbjct: 48  TCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKH 107

Query: 166 GCSWLMLHGHDIN---------------FTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIH 210
               L+  G D++               +      PL  A   N      +L +N     
Sbjct: 108 YVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHK-- 165

Query: 211 ETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRG---------LISCLKA 261
                                 Q +    +++G + LH               +      
Sbjct: 166 ----------------------QADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDL 203

Query: 262 ILDSGMADVDIKTKERRV------TALHLAAENGYVECLRILLENHANCNERNH 309
           +L    A +   T    +      + L +AA+ G +   + ++         +H
Sbjct: 204 LLIKC-AKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADAAAHH 256

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 78.7 bits (194), Expect = 3e-16
 Identities = 35/184 (19%), Positives = 62/184 (33%), Gaps = 43/184 (23%)

Query: 272 IKTKERRVTALHLAAENGYVECL----RILLENHANCNERNHKEQI----PLHLAAKCQS 323
           +K   R    L      G  + L      LL +     +   +E       L  A    S
Sbjct: 1   MKVFNR--PILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLS 58

Query: 324 ---VECMEMLLRKG-----------SQVNASDCDNRTPLHASLSKNILSVHPLEILLKWG 369
               + + +LL              S         +T LH ++ +       +E+L++ G
Sbjct: 59  AGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHY--VELLVEKG 116

Query: 370 ANVNARDI--------------FGYSPIHIAALSELSQCVDCLIMHG---ADISSKTPSG 412
           A+V+A+                FG  P+ +AA +     V  L  +G   AD+  +   G
Sbjct: 117 ADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRG 176

Query: 413 SSAL 416
           ++ L
Sbjct: 177 NTVL 180

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  107 bits (270), Expect = 2e-26
 Identities = 53/277 (19%), Positives = 89/277 (32%), Gaps = 71/277 (25%)

Query: 79  RASLLEAMKMSSGDVNVL-----YAIENSLYEPDEMATLFSKASQAEKTTALLWCVFVKR 133
           R  L   +  S G    L     Y   NS Y  D     +++ S  +  T L+  V   +
Sbjct: 3   RDRLFSVV--SRGVPEELTGLLEYLRWNSKYLTDS---AYTEGSTGK--TCLMKAVLNLQ 55

Query: 134 EDLLDALHQL---GADLSN------------DKYG--ALHLAAFNGSIKGCSWLMLHGHD 176
           + +   +  L     D  N               G  ALH+A    S++    L+ +G D
Sbjct: 56  DGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGAD 115

Query: 177 IN--------------FTKDSYTPLHFAVLGNYVDCAKFLIKN---KAHIHE------TI 213
           ++                     PL  A      D   +L++N    A +        T+
Sbjct: 116 VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTV 175

Query: 214 VHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIK 273
           +H+ V                     N+   S L I    GL+     +  +     +I 
Sbjct: 176 LHALVMIAD-----------------NSPENSALVIHMYDGLLQMGARLCPTV-QLEEIS 217

Query: 274 TKERRVTALHLAAENGYVECLRILLENHANCNERNHK 310
             +   T L LAA+ G +E  R +L+   +    +H 
Sbjct: 218 NHQGL-TPLKLAAKEGKIEIFRHILQREFSGAAAHHH 253

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 98.3 bits (245), Expect = 5e-23
 Identities = 38/224 (16%), Positives = 70/224 (31%), Gaps = 56/224 (25%)

Query: 246 PLHIAADRG-------LISCLKAILDSGMADVDIKTKERRVTALHLAA---ENGYVECLR 295
            L     RG       L+  L+            +    + T L  A    ++G   C+ 
Sbjct: 5   RLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGK-TCLMKAVLNLQDGVNACIM 63

Query: 296 ILLE-----------NHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN 344
            LL+            +A C +  ++    LH+A + +S++C+++L+  G+ V+   C  
Sbjct: 64  PLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGR 123

Query: 345 -------------RTPLHASLSKNILSVHPLEILLKWG---ANVNARDIFGYSPIHIAAL 388
                          PL  +       V  +  LL+     A++ A D  G + +H   +
Sbjct: 124 FFQKHQGTCFYFGELPLSLAACTKQWDV--VTYLLENPHQPASLEATDSLGNTVLHALVM 181

Query: 389 SE----------------LSQCVDCLIMHGADISSKTPSGSSAL 416
                             L Q    L             G + L
Sbjct: 182 IADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPL 225

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 52.5 bits (126), Expect = 2e-07
 Identities = 15/124 (12%), Positives = 33/124 (26%), Gaps = 28/124 (22%)

Query: 148 SNDKYG--ALHLAAFNGSIKGCSWLMLHGH---DINF-TKDSYTPLHFAVLG-------- 193
           +   +G   L LAA        ++L+ + H    +        T LH  V+         
Sbjct: 131 TCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENS 190

Query: 194 --------NYVDCAKFLIKNKAHIHE------TIVHSAVSTNAVDCVQLLLSLQINPNVL 239
                     +     L               T +  A     ++  + +L  + +    
Sbjct: 191 ALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGAAA 250

Query: 240 NNKG 243
           ++  
Sbjct: 251 HHHH 254

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  102 bits (255), Expect = 2e-23
 Identities = 42/384 (10%), Positives = 90/384 (23%), Gaps = 64/384 (16%)

Query: 53  VDNMRTDSLEETISDELSYKVCKESIRASLLEAMKMSSGDVNVLYAIENSLYEPDEMATL 112
           ++N   D     I   L   + +  I A+ L  M +S  +                +   
Sbjct: 9   IENYENDPQLRLIPWILWENLFQHFISANELSLMTLSYKEA---------------IHIF 53

Query: 113 FSKASQAEKTTALLWCVFVKREDLLDALHQLGADLSNDKYGALHLAAFNGSIKG---CSW 169
                  E+   LL   +         L                +AA  G          
Sbjct: 54  LPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCL 113

Query: 170 LMLHGHDIN-FTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQL 228
           L+     +     ++Y     A    ++     L +                        
Sbjct: 114 LLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAP--------------------- 152

Query: 229 LLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAA-E 287
                    ++  +      +AA+ G +  L  + +    +     +     A   AA  
Sbjct: 153 ----TEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVG 208

Query: 288 NGYVECLRILLENHANCNERNHKEQIPLH------LAAKCQSVECMEMLLRKGSQ----- 336
            G+   +  LL+           E           +A     ++ M    +  +      
Sbjct: 209 RGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFD 268

Query: 337 -VNASDC-DNRTPLHASLSKN------ILSVHPLEILLKWGANVNARDIFGYSPIHIAAL 388
            V  S+C      L   + +N       +        +K  A            + +A  
Sbjct: 269 LVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALR 328

Query: 389 SELSQCVDCLIMHGADISSKTPSG 412
                    L+   + ++    + 
Sbjct: 329 LGNQGACALLLSIPSVLALTKANN 352

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 90.4 bits (224), Expect = 2e-19
 Identities = 34/254 (13%), Positives = 75/254 (29%), Gaps = 24/254 (9%)

Query: 188 HFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPL 247
           H+      +         K+ +   +      ++A+D + LLL+      V+  +     
Sbjct: 73  HYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAF 132

Query: 248 HIAADRGLISCLKAILDSGMADVDIKTKERR-VTALHLAAENGYVECLRILLENHANCNE 306
            +AA+ G +  L  + +       +   +     A  LAAENG++  L  L E       
Sbjct: 133 RLAAENGHLHVLNRLCELA-PTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEAT 191

Query: 307 RNHKEQ--IPLHLAAKCQS-VECMEMLLRKGSQVNASDCDNRTPLHASLSKNILS----V 359
              + +       AA  +     +  LL     +  ++          ++  I      +
Sbjct: 192 AMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRL 251

Query: 360 HPLEILLKWGANVNARDI-------FGYSPIHIAALSELSQCVDCL--------IMHGAD 404
             +    K        D+        G+  +           +D +        I   A 
Sbjct: 252 KEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAP 311

Query: 405 ISSKTPSGSSALSI 418
            ++     +  L +
Sbjct: 312 TATIPGDANELLRL 325

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 63.4 bits (154), Expect = 1e-10
 Identities = 26/203 (12%), Positives = 63/203 (31%), Gaps = 24/203 (11%)

Query: 110 ATLFSKASQAEKTTALLWCVFVK-REDLLDALHQLGADLSNDKYGALHLAAFNGSIKGCS 168
            T  +   QAE   A  W    +   ++++ L      L+     A       G      
Sbjct: 187 PTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAY----AEIHEFEYGEKYVNP 242

Query: 169 WLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNA---VDC 225
           ++  H + +    + +     +      D      K++      ++ + +  N    +D 
Sbjct: 243 FIARHVNRLK---EMHDAFKLSNPDGVFDLVT---KSECLQGFYMLRNLIRRNDEVLLDD 296

Query: 226 VQLLLSLQ-----INPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVT 280
           ++ LLS+           +       L +A   G       +L    + + +        
Sbjct: 297 IRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIP-SVLALTKA----N 351

Query: 281 ALHLAAENGYVECLRILLENHAN 303
             ++    G ++   + LE+H +
Sbjct: 352 NYYINETGGRLDLRAVALEHHHH 374

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 85.5 bits (213), Expect = 2e-20
 Identities = 39/91 (42%), Positives = 60/91 (65%), Gaps = 2/91 (2%)

Query: 280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNA 339
           T LHLAA NG++E +++LLE  A+ N ++   + PLHLAA+   +E +++LL  G+ VNA
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63

Query: 340 SDCDNRTPLHASLSKNILSVHPLEILLKWGA 370
            D + RTPLH +     L V  +++LL+ GA
Sbjct: 64  KDKNGRTPLHLAARNGHLEV--VKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 81.6 bits (203), Expect = 5e-19
 Identities = 38/90 (42%), Positives = 58/90 (64%), Gaps = 2/90 (2%)

Query: 314 PLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVN 373
           PLHLAA+   +E +++LL  G+ VNA D + RTPLH +     L V  +++LL+ GA+VN
Sbjct: 5   PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEV--VKLLLEAGADVN 62

Query: 374 ARDIFGYSPIHIAALSELSQCVDCLIMHGA 403
           A+D  G +P+H+AA +   + V  L+  GA
Sbjct: 63  AKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 78.6 bits (195), Expect = 5e-18
 Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 29/121 (23%)

Query: 182 DSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNN 241
           +  TPLH A    +++  K L++  A                           + N  + 
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGA---------------------------DVNAKDK 33

Query: 242 KGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENH 301
            G +PLH+AA  G +  +K +L++G ADV+ K K  R T LHLAA NG++E +++LLE  
Sbjct: 34  NGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGR-TPLHLAARNGHLEVVKLLLEAG 91

Query: 302 A 302
           A
Sbjct: 92  A 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 62.4 bits (153), Expect = 3e-12
 Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 2/76 (2%)

Query: 343 DNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHG 402
           + RTPLH +     L V  +++LL+ GA+VNA+D  G +P+H+AA +   + V  L+  G
Sbjct: 1   NGRTPLHLAARNGHLEV--VKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 58

Query: 403 ADISSKTPSGSSALSI 418
           AD+++K  +G + L +
Sbjct: 59  ADVNAKDKNGRTPLHL 74

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 62.0 bits (152), Expect = 4e-12
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 7/85 (8%)

Query: 154 ALHLAAFNGSIKGCSWLMLHGHDIN-FTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE- 211
            LHLAA NG ++    L+  G D+N   K+  TPLH A    +++  K L++  A ++  
Sbjct: 5   PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAK 64

Query: 212 -----TIVHSAVSTNAVDCVQLLLS 231
                T +H A     ++ V+LLL 
Sbjct: 65  DKNGRTPLHLAARNGHLEVVKLLLE 89

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 60.8 bits (149), Expect = 1e-11
 Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 144 GADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHGHDINF-TKDSYTPLHFAVLGNYVDCA 199
           GAD+ + DK G   LHLAA NG ++    L+  G D+N   K+  TPLH A    +++  
Sbjct: 25  GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVV 84

Query: 200 KFLIKNKAH 208
           K L++  A+
Sbjct: 85  KLLLEAGAY 93

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 80.3 bits (199), Expect = 3e-18
 Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 5/114 (4%)

Query: 217 AVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKE 276
             S +       L+    +   + +     L  AA  G    ++ ++ +G ADV  K K 
Sbjct: 1   GSSHHHHHHSSGLVPRGSH---MGSDLGKKLLEAARAGQDDEVRILMANG-ADVAAKDKN 56

Query: 277 RRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEML 330
              T LHLAA NG++E +++LLE  A+   ++   +    ++    + +  E+L
Sbjct: 57  GS-TPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 78.8 bits (195), Expect = 7e-18
 Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 5/115 (4%)

Query: 318 AAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDI 377
            +          L+ +GS + +   D    L  +          + IL+  GA+V A+D 
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGS---DLGKKLLEAARAGQDDE--VRILMANGADVAAKDK 55

Query: 378 FGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRK 432
            G +P+H+AA +   + V  L+  GAD+ ++   G +A  I + N    ++ + +
Sbjct: 56  NGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEILQ 110

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 78.8 bits (195), Expect = 8e-18
 Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 5/110 (4%)

Query: 250 AADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNH 309
            +          ++  G + +           L  AA  G  + +RIL+ N A+   ++ 
Sbjct: 1   GSSHHHHHHSSGLVPRG-SHMGSDLG----KKLLEAARAGQDDEVRILMANGADVAAKDK 55

Query: 310 KEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSV 359
               PLHLAA+   +E +++LL  G+ V A D   +T    S+      +
Sbjct: 56  NGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDL 105

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 73.4 bits (181), Expect = 6e-16
 Identities = 30/140 (21%), Positives = 51/140 (36%), Gaps = 31/140 (22%)

Query: 158 AAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSA 217
            + +      S L+  G  +    D    L  A      D  + L+ N A          
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMG--SDLGKKLLEAARAGQDDEVRILMANGA---------- 48

Query: 218 VSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKER 277
                            +    +  G +PLH+AA  G +  +K +L++G ADV  + K  
Sbjct: 49  -----------------DVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG-ADVXAQDKFG 90

Query: 278 RVTALHLAAENGYVECLRIL 297
           + TA  ++ +NG  +   IL
Sbjct: 91  K-TAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 68.0 bits (167), Expect = 5e-14
 Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 7/93 (7%)

Query: 144 GADLSNDKYGALHLAAFNGSIKGCSWLMLHGHDINFT-KDSYTPLHFAVLGNYVDCAKFL 202
           G+ + +D    L  AA  G       LM +G D+    K+  TPLH A    +++  K L
Sbjct: 17  GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLL 76

Query: 203 IKNKAHIHE------TIVHSAVSTNAVDCVQLL 229
           ++  A +        T    ++     D  ++L
Sbjct: 77  LEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 80.7 bits (198), Expect = 1e-15
 Identities = 107/684 (15%), Positives = 196/684 (28%), Gaps = 208/684 (30%)

Query: 2   ELDVKKNTLDRSRSFNNDTRFP-LALMRSKTSKSYSTKKAMFNQLNDEKPTMVDNMRTDS 60
             D K +  D  +S  +      + + +   S +      +F  L  ++  MV     + 
Sbjct: 32  NFDCK-DVQDMPKSILSKEEIDHIIMSKDAVSGTL----RLFWTLLSKQEEMVQKFVEEV 86

Query: 61  LEETISDELSYKVCKESIRASLLEAMKMSSGDVNVLYAIENSLYEPDEMATLFSKASQAE 120
           L        +YK     I+       +  S    +     + LY  ++   +F+K     
Sbjct: 87  LRI------NYKFLMSPIK----TEQRQPSMMTRMYIEQRDRLYNDNQ---VFAK----- 128

Query: 121 KTTALLWCVFVKREDLLDALHQLGADLSNDKYGALHLAAFNGSIKGC--SWLMLHGHDIN 178
                     V R      L Q   +L   K   +      G + G   +W+ L      
Sbjct: 129 --------YNVSRLQPYLKLRQALLELRPAKNVLID-----G-VLGSGKTWVAL------ 168

Query: 179 FTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNV 238
                       V  +Y    K   K    I    + +  S   V  +   L  QI+PN 
Sbjct: 169 -----------DVCLSY----KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW 213

Query: 239 LNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILL 298
            +       H +  +  I               I+ + RR     L     Y  CL +L 
Sbjct: 214 TSR----SDHSSNIKLRIH-------------SIQAELRR-----LLKSKPYENCLLVL- 250

Query: 299 ENHANCNERNHKEQIPLHLAAKCQSVECMEMLL--RKGSQVNASDCDNRTPLHASLSKNI 356
               N                 C+      +LL  R     +       T  H SL  + 
Sbjct: 251 ---LNVQNAKAWN----AFNLSCK------ILLTTRFKQVTDFLSAATTT--HISLDHHS 295

Query: 357 LSVHP---LEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGS 413
           +++ P     +LLK+  +   +D+    P  +   +                        
Sbjct: 296 MTLTPDEVKSLLLKY-LDCRPQDL----PREVLTTNPR---------------------- 328

Query: 414 SALSII---MRNTPS--------SISSVRKKLDSSISLQDPEASTKDIELKLNFKY--IL 460
             LSII   +R+  +        +   +   ++SS+++ +P       E +  F    + 
Sbjct: 329 -RLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA------EYRKMFDRLSVF 381

Query: 461 QNGPDGEIGMLKIFQNDGQKEILE---HPLCEAFLYVKWEKMKKFYLFRLVLSSIFVLVL 517
                    +L +   D  K  +    + L +  L  K  K     +  + L     L +
Sbjct: 382 PPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLE----LKV 437

Query: 518 SVYVLTTLAQ---DCYNASKNITLFTPTFCTKNSE-------IGH-------------F- 553
            +     L +   D YN  K    F                 IGH             F 
Sbjct: 438 KLENEYALHRSIVDHYNIPKT---FDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFR 494

Query: 554 -LLRNPDFME-------TVWYVLA-LLATIELIRKIFGLVEYASFREYCSHVTNLFEWYM 604
            +  +  F+E       T W     +L T++ ++          ++ Y       +E  +
Sbjct: 495 MVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKF---------YKPYICDNDPKYERLV 545

Query: 605 I-ISVFLISC----VYTKRTYIWQ 623
             I  FL       + +K T + +
Sbjct: 546 NAILDFLPKIEENLICSKYTDLLR 569

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 72.1 bits (176), Expect = 2e-13
 Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 4/138 (2%)

Query: 295 RILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDC--DNRTPLHASL 352
           R   E  +      H   +    +    S+  M   L  G+ VN  +   DN TPL  + 
Sbjct: 184 RSKPEPPSEDLGSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQAT 243

Query: 353 SKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSG 412
           + N  S+   E LL+ GANVN  D  G  P+H A +   +      +  GAD+ ++   G
Sbjct: 244 AAN--SLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEG 301

Query: 413 SSALSIIMRNTPSSISSV 430
              L+I M    + I ++
Sbjct: 302 RDPLTIAMETANADIVTL 319

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 62.1 bits (150), Expect = 2e-10
 Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 1/106 (0%)

Query: 245 SPLHIAADRGLISCLKAILDSGMADVD-IKTKERRVTALHLAAENGYVECLRILLENHAN 303
           + L  A+         A   +  ADV+ +   +   T L  A     +     LL+N AN
Sbjct: 201 ALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN 260

Query: 304 CNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLH 349
            N+ +   + PLH A          + L++G+ + A D + R PL 
Sbjct: 261 VNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLT 306

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 61.3 bits (148), Expect = 5e-10
 Identities = 35/137 (25%), Positives = 53/137 (38%), Gaps = 4/137 (2%)

Query: 303 NCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPL 362
           N          PL  A    S+   E LL+ G+ VN +D   R PLH +           
Sbjct: 227 NWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILG--HTGLA 284

Query: 363 EILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIM--HGADISSKTPSGSSALSIIM 420
            + LK GA++ ARD  G  P+ IA  +  +  V  L +       +++  +G      I 
Sbjct: 285 CLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIF 344

Query: 421 RNTPSSISSVRKKLDSS 437
           R+     S   +KL   
Sbjct: 345 RDFSLMASDDPEKLSRR 361

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 59.0 bits (142), Expect = 3e-09
 Identities = 24/142 (16%), Positives = 50/142 (35%), Gaps = 5/142 (3%)

Query: 205 NKAHIHETIVHSAVSTNAVDCVQLLLSL--QINPNVLNNKGVSPLHIAADRGLISCLKAI 262
              H    +  ++    ++  +   L+    +N         +PL  A     +   + +
Sbjct: 195 GSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFL 254

Query: 263 LDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQ 322
           L +G A+V+          LH A   G+     + L+  A+   R+ + + PL +A +  
Sbjct: 255 LQNG-ANVNQAD-SAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETA 312

Query: 323 SVECMEMLLRKGSQVNASDCDN 344
           + +    LLR      A     
Sbjct: 313 NADI-VTLLRLAKMREAEAAQG 333

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 57.1 bits (137), Expect = 1e-08
 Identities = 31/148 (20%), Positives = 49/148 (33%), Gaps = 4/148 (2%)

Query: 167 CSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCV 226
                LH   + F    + P    +       A     N    + T +  A + N++   
Sbjct: 192 EDLGSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLAC 251

Query: 227 QLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAA 286
           + LL    N N  ++ G  PLH A   G        L  G AD+  +  E R   L +A 
Sbjct: 252 EFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRG-ADLGARDSEGR-DPLTIAM 309

Query: 287 ENGYVECLRILLENHANCNERNHKEQIP 314
           E    + + +L    A   E    +   
Sbjct: 310 ETANADIVTLLR--LAKMREAEAAQGQA 335

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 70.4 bits (172), Expect = 2e-13
 Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 4/119 (3%)

Query: 253 RGLISCLKAILDSGMADVDIKTKERRVTALHLAAENG---YVECLRILLENHANCNERNH 309
            GL+      +D           E   TALHLA  +     +  +  L++N  N +++  
Sbjct: 144 FGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTG 203

Query: 310 KEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLH-ASLSKNILSVHPLEILLK 367
           K    LH      + EC+++LLR  + +  ++    TPL  A   K+      L   L 
Sbjct: 204 KGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALS 262

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 66.2 bits (161), Expect = 6e-12
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 318 AAKCQSVECMEMLLRKGSQVNA------SDCDNRTPLH-ASLSKNILSVHPLEILLKWGA 370
           A K + +  +      G  +            + T LH A  S +  S+H ++ L++   
Sbjct: 137 AVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSG 196

Query: 371 NVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRN 422
           N++ +   G + +H   L++ ++C+  L+   A I     SG + L I  R 
Sbjct: 197 NLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRL 248

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 65.0 bits (158), Expect = 1e-11
 Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 7/91 (7%)

Query: 314 PLHLAAKC---QSVECMEMLLRKGSQVNASDCDNRTPLH-ASLSKNILSVHPLEILLKWG 369
            LHLA +     S+  ++ L++    ++       T LH   L+ N   +   ++LL+  
Sbjct: 172 ALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECL---KLLLRGK 228

Query: 370 ANVNARDIFGYSPIHIAALSELSQCVDCLIM 400
           A++   +  G +P+ IA   +   C + L  
Sbjct: 229 ASIEIANESGETPLDIAKRLKHEHCEELLTQ 259

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 62.3 bits (151), Expect = 1e-10
 Identities = 35/189 (18%), Positives = 59/189 (31%), Gaps = 35/189 (18%)

Query: 127 WCVFVKRE--DLLDALHQLGADLSNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSY 184
              + +++  D    LH L   +       L  A  +G        + +GH+        
Sbjct: 116 ERRYARKKHADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHE-----PDE 170

Query: 185 TPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGV 244
           T LH AV                         +V   ++  V  L+    N +    KG 
Sbjct: 171 TALHLAVR------------------------SVDRTSLHIVDFLVQNSGNLDKQTGKGS 206

Query: 245 SPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANC 304
           + LH         CLK +L    A ++I  +    T L +A    +  C  +L +  A  
Sbjct: 207 TALHYCCLTDNAECLKLLLRGK-ASIEIANESGE-TPLDIAKRLKHEHCEELLTQ--ALS 262

Query: 305 NERNHKEQI 313
              N    +
Sbjct: 263 GRFNSHVHV 271

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 70.0 bits (171), Expect = 4e-13
 Identities = 21/113 (18%), Positives = 40/113 (35%), Gaps = 4/113 (3%)

Query: 255 LISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRI---LLENHANCNERNHKE 311
           ++       D G        +      LHLA +      L +   +++N  + + +    
Sbjct: 167 VLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADG 226

Query: 312 QIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLH-ASLSKNILSVHPLE 363
              LH AA     +C+++LL+  + V   +    T L  A    +      LE
Sbjct: 227 NTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLE 279

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 68.1 bits (166), Expect = 2e-12
 Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 7/129 (5%)

Query: 306 ERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNAS------DCDNRTPLH-ASLSKNILS 358
            R   E   L  A   + +  +      G                   LH A    N  S
Sbjct: 146 RRCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQAS 205

Query: 359 VHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSI 418
           +  ++ +++ G +++A+   G + +H AAL     C+  L+   A + +   +G +AL I
Sbjct: 206 LPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDI 265

Query: 419 IMRNTPSSI 427
             +      
Sbjct: 266 ARKKHHKEC 274

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 64.2 bits (156), Expect = 3e-11
 Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 7/91 (7%)

Query: 314 PLHLA---AKCQSVECMEMLLRKGSQVNASDCDNRTPLH-ASLSKNILSVHPLEILLKWG 369
            LHLA   A   S+  ++ +++ G  ++A   D  T LH A+L      +   ++LLK  
Sbjct: 193 VLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCL---KLLLKGR 249

Query: 370 ANVNARDIFGYSPIHIAALSELSQCVDCLIM 400
           A V   +  G + + IA      +C + L  
Sbjct: 250 ALVGTVNEAGETALDIARKKHHKECEELLEQ 280

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 57.7 bits (139), Expect = 4e-09
 Identities = 27/119 (22%), Positives = 41/119 (34%), Gaps = 31/119 (26%)

Query: 144 GADLSNDKYGALHLAAFNG---SIKGCSWLMLHGHDINF-TKDSYTPLHFAVLGNYVDCA 199
           G D    +   LHLA       S+    +++ +G  ++    D  T LH+A L N  DC 
Sbjct: 183 GPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCL 242

Query: 200 KFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISC 258
           K L+K +A                               +N  G + L IA  +    C
Sbjct: 243 KLLLKGRA---------------------------LVGTVNEAGETALDIARKKHHKEC 274

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 56.2 bits (135), Expect = 2e-08
 Identities = 29/165 (17%), Positives = 46/165 (27%), Gaps = 35/165 (21%)

Query: 156 HLAAFNGSIKGCSWLMLHGHDINFTK-------DSYTPLHFAVLGNYVDCAKFLIKNKAH 208
             A  N  +        +G D                 LH AV     + A   +     
Sbjct: 156 WTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVK--VANQASLPL----- 208

Query: 209 IHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMA 268
                            V  ++    + +     G + LH AA      CLK +L    A
Sbjct: 209 -----------------VDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR-A 250

Query: 269 DVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQI 313
            V    +    TAL +A +  + EC  +L +  A          +
Sbjct: 251 LVGTVNEAGE-TALDIARKKHHKECEELLEQ--AQAGTFAFPLHV 292

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 65.3 bits (159), Expect = 4e-11
 Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 1/84 (1%)

Query: 340 SDCDNRTPLH-ASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCL 398
           +       LH A    N  S+  ++ +++ G +++A+   G + +H AAL     C+  L
Sbjct: 167 AQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLL 226

Query: 399 IMHGADISSKTPSGSSALSIIMRN 422
           +   A + +   +G +AL I  + 
Sbjct: 227 LKGRALVGTVNEAGETALDIARKK 250

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 53.4 bits (128), Expect = 2e-07
 Identities = 28/124 (22%), Positives = 43/124 (34%), Gaps = 16/124 (12%)

Query: 155 LHLAAFNGSIKGCSWLMLHGHDINFT-------KDSYTPLHFAVL---GNYVDCAKFLIK 204
           L  A  N  +        +G D                 LH AV       +    F+I+
Sbjct: 136 LWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQ 195

Query: 205 NKAHIH------ETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISC 258
           N  H+        T +H A   N  DC++LLL  +     +N  G + L IA  +    C
Sbjct: 196 NGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKEC 255

Query: 259 LKAI 262
            + +
Sbjct: 256 EELL 259

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	854
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	100.0
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	100.0
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	100.0
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	100.0
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	100.0
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	100.0
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	100.0
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	100.0
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	100.0
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	100.0
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	100.0
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	100.0
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	100.0
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	100.0
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	100.0
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	100.0
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	100.0
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	100.0
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	100.0
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	100.0
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	100.0
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	100.0
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	100.0
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	100.0
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	100.0
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	100.0
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	100.0
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	100.0
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	100.0
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	100.0
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	100.0
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	100.0
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	100.0
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	100.0
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	100.0
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	100.0
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	100.0
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	100.0
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	100.0
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	100.0
2rfa_A	232	Transient receptor potential cation channel subfa	100.0
2rfa_A	232	Transient receptor potential cation channel subfa	99.97
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.97
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.97
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.97
2etb_A	256	Transient receptor potential cation channel subfam	99.97
4gpm_A	169	Engineered protein OR264; de novo protein, structu	99.97
2pnn_A	273	Transient receptor potential cation channel subfa	99.97
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.97
4gpm_A	169	Engineered protein OR264; de novo protein, structu	99.97
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.97
2pnn_A	273	Transient receptor potential cation channel subfa	99.96
2etb_A	256	Transient receptor potential cation channel subfam	99.96
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.96
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.96
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.95
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.95
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.95
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.95
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.94
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.94
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.94
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.94
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.94
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.94
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.94
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.94
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.94
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.93
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.93
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.93
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.93
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.93
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.93
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.93
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.93
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.93
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.92
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.92
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.92
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.91
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.9
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.9
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.88
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.88
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.88
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.88
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.88
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.86
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.86
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.84
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.84
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.84
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.84
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.83
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.83
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.83
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.82
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.82
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.81
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.81
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.81
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.8
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.79
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.78
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.78
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.77
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.77
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.75
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.75
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.74
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.72
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.59
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.55
4dxw_A	229	Navrh, ION transport protein; tetrameric, voltage-	99.4
3rvy_A	285	ION transport protein; tetrameric ION channel, vol	99.37
2r9r_B	514	Paddle chimera voltage gated potassium channel KV;	98.74
4f4l_A	112	ION transport protein; alpha helical membrane prot	98.68
3beh_A	355	MLL3241 protein; transmembrane protein, membrane p	98.18
1orq_C	223	Potassium channel; voltage-dependent, KVAP, FAB co	97.6
3vou_A	148	ION transport 2 domain protein, voltage-gated SOD	92.85
2a9h_A	155	Voltage-gated potassium channel; potassium channel	92.26
2ih3_C	122	Voltage-gated potassium channel; ION channel D-ami	90.85
1ors_C	132	Potassium channel; voltage-dependent, voltage sens	84.17
3eff_K	139	Voltage-gated potassium channel; FULL length KCSA,	84.09

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=4.6e-51  Score=460.49  Aligned_cols=319  Identities=28%  Similarity=0.347  Sum_probs=239.4

Q ss_pred             cccccCCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHH
Q psy817          116 ASQAEKTTALLWCVFVKREDLLDALHQLGADLSN---DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAV  191 (854)
Q Consensus       116 ~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~---~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~  191 (854)
                      ..+..|.||||+|+..|+.+++++|+++|+++|.   +|.||||+|+..|+.+++++|+++|++++..+ .|.||||+|+
T Consensus        42 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~  121 (437)
T 1n11_A           42 VSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAA  121 (437)
T ss_dssp             CSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHH
T ss_pred             CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Confidence            3455677777777777777777777777777654   67777777777777777777777777777654 4777777777


Q ss_pred             hCCCHHHHHHHHhCCCCC------CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy817          192 LGNYVDCAKFLIKNKAHI------HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDS  265 (854)
Q Consensus       192 ~~~~~~iv~~Ll~~~~~~------~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~  265 (854)
                      ..|+.+++++|++++++.      |.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++
T Consensus       122 ~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~  201 (437)
T 1n11_A          122 REGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPR  201 (437)
T ss_dssp             HHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGG
T ss_pred             HcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence            777777777777777654      56777777777777777777777777777777777777777777777777777777


Q ss_pred             CCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCC
Q psy817          266 GMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNR  345 (854)
Q Consensus       266 ~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~  345 (854)
                      + ++++..+ ..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.
T Consensus       202 g-~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~  279 (437)
T 1n11_A          202 G-GSPHSPA-WNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGL  279 (437)
T ss_dssp             T-CCSCCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCC
T ss_pred             C-CCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCC
Confidence            5 5555543 3455777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             cHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCc
Q psy817          346 TPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPS  425 (854)
Q Consensus       346 t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~  425 (854)
                      ||||.|+..+  +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..++.
T Consensus       280 t~L~~A~~~~--~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~  357 (437)
T 1n11_A          280 TPLHLVAQEG--HVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHT  357 (437)
T ss_dssp             CHHHHHHHHT--CHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred             CHHHHHHHcC--CHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChH
Confidence            7777777777  66777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             chHHhhhhcCCcc
Q psy817          426 SISSVRKKLDSSI  438 (854)
Q Consensus       426 ~~~~~~~~~~~~~  438 (854)
                      +++.++...+...
T Consensus       358 ~iv~~Ll~~ga~~  370 (437)
T 1n11_A          358 DIVTLLLKNGASP  370 (437)
T ss_dssp             HHHHHHHHTTCCS
T ss_pred             HHHHHHHHCcCCC
Confidence            7777666655443

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=4.9e-51  Score=460.28  Aligned_cols=367  Identities=27%  Similarity=0.360  Sum_probs=323.3

Q ss_pred             hhhcchhhhhccccchhhchhhhHHHHHHHHHhcCCChHHHHHHHcCCCChhHHHHHhhhcccccCCcHHHHHHHcCCHH
Q psy817           56 MRTDSLEETISDELSYKVCKESIRASLLEAMKMSSGDVNVLYAIENSLYEPDEMATLFSKASQAEKTTALLWCVFVKRED  135 (854)
Q Consensus        56 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~  135 (854)
                      +..+.++.++..+.+.+..+.....+|+.++  ..|+..+++.+.....+        .+..+..|.||||+|+..|+.+
T Consensus        25 g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~--~~g~~~~v~~Ll~~g~~--------~~~~~~~g~t~L~~A~~~g~~~   94 (437)
T 1n11_A           25 GHLPIVKNLLQRGASPNVSNVKVETPLHMAA--RAGHTEVAKYLLQNKAK--------VNAKAKDDQTPLHCAARIGHTN   94 (437)
T ss_dssp             TCHHHHHHHHHTTCCSCCSSSCCCCHHHHHH--HHTCHHHHHHHHHHTCC--------SSCCCTTSCCHHHHHHHHTCHH
T ss_pred             CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHhCCCC--------CCCCCCCCCCHHHHHHHCCCHH
Confidence            4445555666655555544444444555444  23444444443222111        1345678999999999999999


Q ss_pred             HHHHHHHcCCCCCC---CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHhCCCHHHHHHHHhCCCCC--
Q psy817          136 LLDALHQLGADLSN---DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGNYVDCAKFLIKNKAHI--  209 (854)
Q Consensus       136 iv~~Ll~~g~~~~~---~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~~~~~iv~~Ll~~~~~~--  209 (854)
                      ++++|+++|++++.   .|.||||+|+..|+.+++++|+++|++.+..+ .|.||||+|+..|+.+++++|+++|+++  
T Consensus        95 ~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~  174 (437)
T 1n11_A           95 MVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNA  174 (437)
T ss_dssp             HHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred             HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC
Confidence            99999999999865   89999999999999999999999999988655 5999999999999999999999999876  


Q ss_pred             ----CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHH
Q psy817          210 ----HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLA  285 (854)
Q Consensus       210 ----~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A  285 (854)
                          |.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.+ ++++..+ ..|.||||+|
T Consensus       175 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~-~~g~t~L~~A  252 (437)
T 1n11_A          175 AGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYG-GSANAES-VQGVTPLHLA  252 (437)
T ss_dssp             CCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCC-TTCCCHHHHH
T ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCC-CCCCCHHHHH
Confidence                789999999999999999999999999999999999999999999999999999987 7888765 4567999999


Q ss_pred             HHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHH
Q psy817          286 AENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEIL  365 (854)
Q Consensus       286 ~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~L  365 (854)
                      +..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||.|+..|  +.+++++|
T Consensus       253 ~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g--~~~~v~~L  330 (437)
T 1n11_A          253 AQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYG--NIKLVKFL  330 (437)
T ss_dssp             HHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSS--CSHHHHHH
T ss_pred             HHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcC--cHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999  78889999


Q ss_pred             HhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHHhhhhcCC
Q psy817          366 LKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDS  436 (854)
Q Consensus       366 l~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~  436 (854)
                      +++|+++|.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|.+.+..+++.++.....
T Consensus       331 l~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~  401 (437)
T 1n11_A          331 LQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTD  401 (437)
T ss_dssp             HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHCC
T ss_pred             HhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhccc
Confidence            99999999999999999999999999999999999999999999999999999999999988888776543

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=100.00  E-value=4.3e-44  Score=388.69  Aligned_cols=283  Identities=25%  Similarity=0.279  Sum_probs=258.1

Q ss_pred             cccCCcHHHHHHHcCCHHHHHHHHHcCCCCCC----CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHh
Q psy817          118 QAEKTTALLWCVFVKREDLLDALHQLGADLSN----DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVL  192 (854)
Q Consensus       118 ~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~----~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~  192 (854)
                      +.+|+|+||.|+.+|+.++|++|+++|+++|.    .|+||||+||..|+.++|++|+++|++++..+ .+.+|++.++.
T Consensus        22 ~~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~  101 (337)
T 4g8k_A           22 AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAI  101 (337)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred             CCCCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHh
Confidence            44578999999999999999999999999975    48999999999999999999999999999776 58999999999


Q ss_pred             CCCHHHHHHHHhCCCCC------CchHHHHHHHcCCHHHHHHHHHCCCCCCCC----------CCCCCcHHHHHHHcCCH
Q psy817          193 GNYVDCAKFLIKNKAHI------HETIVHSAVSTNAVDCVQLLLSLQINPNVL----------NNKGVSPLHIAADRGLI  256 (854)
Q Consensus       193 ~~~~~iv~~Ll~~~~~~------~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----------d~~g~t~L~~A~~~g~~  256 (854)
                      .++.+++..+++.++++      |.||+|.|+..|+.+++++|+++|++++..          +..|.||||+|+..|+.
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~  181 (337)
T 4g8k_A          102 AGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV  181 (337)
T ss_dssp             HTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCH
T ss_pred             cccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCH
Confidence            99999999999999876      789999999999999999999999998754          45689999999999999


Q ss_pred             HHHHHHHHcCCCCccccccCCcCcHHHHHHHcCC----HHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHh
Q psy817          257 SCLKAILDSGMADVDIKTKERRVTALHLAAENGY----VECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLR  332 (854)
Q Consensus       257 ~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~----~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~  332 (854)
                      +++++|+++.+++++.++. .|.|+++.++..++    .+++++|+++|++++.+|..|.||||+|+..|+.++++.|++
T Consensus       182 ~~v~~LL~~~gad~n~~d~-~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~  260 (337)
T 4g8k_A          182 EVLKILLDEMGADVNACDN-MGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLE  260 (337)
T ss_dssp             HHHHHHHHHSCCCTTCCCT-TSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHT
T ss_pred             HHHHHHHhccCCCcCccCC-CCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHH
Confidence            9999999877799998764 56699998876543    458899999999999999999999999999999999999998


Q ss_pred             C-CCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc
Q psy817          333 K-GSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSK  408 (854)
Q Consensus       333 ~-g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~  408 (854)
                      . |+++|.+|.+|+||||+|+..|  +.+++++|+++|+|+|.+     +|||+|+.+|+.++|++|+++||+++..
T Consensus       261 ~~~~~vn~~d~~G~TpL~~A~~~g--~~~iv~~Ll~~GAd~n~~-----~~L~~A~~~~~~~iv~~Ll~~GA~~d~~  330 (337)
T 4g8k_A          261 QEHIEINDTDSDGKTALLLAVELK--LKKIAELLCKRGASTDCG-----DLVMTARRNYDHSLVKVLLSHGAKEDFH  330 (337)
T ss_dssp             STTCCTTCBCTTSCBHHHHHHHTT--CHHHHHHHHTTSCSSTTC-----CHHHHHHHTTCHHHHHHHHHTTCCC---
T ss_pred             hcCCcccCcCCCCCCHHHHHHHcC--CHHHHHHHHHCCCCCCCC-----CHHHHHHHcCCHHHHHHHHHCcCCCCCC
Confidence            5 8999999999999999999999  889999999999999765     5999999999999999999999999864

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=100.00  E-value=3.4e-42  Score=373.72  Aligned_cols=286  Identities=26%  Similarity=0.297  Sum_probs=259.6

Q ss_pred             CCccHHHHHHHcCCHHHHHHHHhCCCCccccC--CCccHHHHHHhCCCHHHHHHHHhCCCCC------CchHHHHHHHcC
Q psy817          150 DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK--DSYTPLHFAVLGNYVDCAKFLIKNKAHI------HETIVHSAVSTN  221 (854)
Q Consensus       150 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~--~g~t~L~~A~~~~~~~iv~~Ll~~~~~~------~~t~L~~A~~~~  221 (854)
                      +|.||||.|+++|++++|++|+++|+|+|..+  .|.||||+|+..|+.+++++|+++|+++      +.++++.++..+
T Consensus        24 ~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~  103 (337)
T 4g8k_A           24 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAG  103 (337)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcc
Confidence            68899999999999999999999999999765  3899999999999999999999999987      689999999999


Q ss_pred             CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccccc---------CCcCcHHHHHHHcCCHH
Q psy817          222 AVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTK---------ERRVTALHLAAENGYVE  292 (854)
Q Consensus       222 ~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~---------~~~~t~L~~A~~~g~~~  292 (854)
                      ..+++..+++.+++++..|..|.||||+|+..|+.+++++|++++ ++++....         ..|.||||+|+..|+.+
T Consensus       104 ~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~g-a~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~  182 (337)
T 4g8k_A          104 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRG-ANVNLRRKTKEDQERLRKGGATALMDAAEKGHVE  182 (337)
T ss_dssp             CHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTT-CCTTCCCCCC-----CTTCSCCHHHHHHHHTCHH
T ss_pred             cchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcC-CCcchhhccccccccccCCCCcHHHHHHHCCCHH
Confidence            999999999999999999999999999999999999999999987 77765432         35789999999999999


Q ss_pred             HHHHHHh-cCCCcCCCCCCCCCHHHHHHhcCC----HHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHh
Q psy817          293 CLRILLE-NHANCNERNHKEQIPLHLAAKCQS----VECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLK  367 (854)
Q Consensus       293 ~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~  367 (854)
                      +|++|++ .|++++.+|..|.|+++.++..++    .+++++|+++|+++|.+|..|+||||.|+..+  ..++++.|++
T Consensus       183 ~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~--~~~~v~~Ll~  260 (337)
T 4g8k_A          183 VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKK--HLGLVQRLLE  260 (337)
T ss_dssp             HHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTT--CHHHHHHHHT
T ss_pred             HHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhh--hhHHHHHHHH
Confidence            9999996 599999999999999998875543    46889999999999999999999999999999  8888999998


Q ss_pred             C-CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHHhhhhcCCcccccCC
Q psy817          368 W-GANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQDP  443 (854)
Q Consensus       368 ~-g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~  443 (854)
                      . |+++|.+|..|+||||+|+..|+.++|++|+++|+|++.+     +||+.|+++++.++++++...++.++...+
T Consensus       261 ~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~~L~~A~~~~~~~iv~~Ll~~GA~~d~~~p  332 (337)
T 4g8k_A          261 QEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----DLVMTARRNYDHSLVKVLLSHGAKEDFHPP  332 (337)
T ss_dssp             STTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----CHHHHHHHTTCHHHHHHHHHTTCCC-----
T ss_pred             hcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CHHHHHHHcCCHHHHHHHHHCcCCCCCCCC
Confidence            5 8999999999999999999999999999999999998764     599999999999999999888877665444

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=1.6e-41  Score=358.91  Aligned_cols=261  Identities=26%  Similarity=0.319  Sum_probs=214.7

Q ss_pred             cCCcHHHHHHHcCCHHHHHHHHHcCCCCCC----CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHhCC
Q psy817          120 EKTTALLWCVFVKREDLLDALHQLGADLSN----DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGN  194 (854)
Q Consensus       120 ~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~----~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~~  194 (854)
                      +|.|+|+.|+..|+.+++++|+++|++++.    .|.||||+|+..|+.+++++|+++|++++..+ +|.||||+|+.. 
T Consensus         4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-   82 (285)
T 1wdy_A            4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIA-   82 (285)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH-
T ss_pred             ccchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc-
Confidence            466777777777777777777777776643    56777777777777777777777777766543 355555555554 


Q ss_pred             CHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q psy817          195 YVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKT  274 (854)
Q Consensus       195 ~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~  274 (854)
                                                |+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++++ ++++...
T Consensus        83 --------------------------~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~  135 (285)
T 1wdy_A           83 --------------------------GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRG-ANVNLRR  135 (285)
T ss_dssp             --------------------------TCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTT-CCTTCCC
T ss_pred             --------------------------CCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhC-CCccccc
Confidence                                      5555556666666677788888888888888888888888888876 6666552


Q ss_pred             ---------cCCcCcHHHHHHHcCCHHHHHHHHhc-CCCcCCCCCCCCCHHHHHHhcCC----HHHHHHHHhCCCCCCCc
Q psy817          275 ---------KERRVTALHLAAENGYVECLRILLEN-HANCNERNHKEQIPLHLAAKCQS----VECMEMLLRKGSQVNAS  340 (854)
Q Consensus       275 ---------~~~~~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~g~~~~~~  340 (854)
                               +..|.||||.|+..|+.+++++|+++ |++++..+..|.||||.|+..++    .+++++|+++|++++..
T Consensus       136 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~  215 (285)
T 1wdy_A          136 KTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVR  215 (285)
T ss_dssp             CCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCC
T ss_pred             ccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCc
Confidence                     34577999999999999999999987 99999999999999999999999    89999999999999999


Q ss_pred             cCCCCcHHHHHHhcCCCChHHHHHHHh-CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Q psy817          341 DCDNRTPLHASLSKNILSVHPLEILLK-WGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTP  410 (854)
Q Consensus       341 ~~~g~t~L~~a~~~~~~~~~~v~~Ll~-~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~  410 (854)
                      |..|.||||.|+..+  +.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|.
T Consensus       216 ~~~g~t~L~~A~~~~--~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d~  284 (285)
T 1wdy_A          216 GERGKTPLILAVEKK--HLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL  284 (285)
T ss_dssp             CTTSCCHHHHHHHTT--CHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred             CCCCCcHHHHHHHcC--CHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccc
Confidence            999999999999999  7888999999 8999999999999999999999999999999999999998773

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=100.00  E-value=2.9e-41  Score=368.55  Aligned_cols=288  Identities=28%  Similarity=0.318  Sum_probs=265.2

Q ss_pred             ccccCCcHHHHHHHcCCHHHHHHHHHc-CCCCCC---CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHH
Q psy817          117 SQAEKTTALLWCVFVKREDLLDALHQL-GADLSN---DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAV  191 (854)
Q Consensus       117 ~~~~~~t~L~~Aa~~g~~~iv~~Ll~~-g~~~~~---~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~  191 (854)
                      .+..+.++|+.||..|+.+.++.|+.. |.+++.   .|.||||+|+..|+.+++++|+++|++++..+ +|.||||+|+
T Consensus        20 ~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~   99 (351)
T 3utm_A           20 TGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNAC   99 (351)
T ss_dssp             HHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred             eccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHH
Confidence            345678999999999999999888865 777654   89999999999999999999999999999776 5999999999


Q ss_pred             hCCCHHHHHHHHhCCCCC------CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy817          192 LGNYVDCAKFLIKNKAHI------HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDS  265 (854)
Q Consensus       192 ~~~~~~iv~~Ll~~~~~~------~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~  265 (854)
                      ..|+.+++++|+++|+++      |.||||.|+..|+.+++++|+++|++++..+..|.||++.|+..+..+.+++....
T Consensus       100 ~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~  179 (351)
T 3utm_A          100 SYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKG  179 (351)
T ss_dssp             HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHH
T ss_pred             HCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcc
Confidence            999999999999999877      68999999999999999999999999999999999999999998888888876642


Q ss_pred             CCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhc---CCHHHHHHHHhCCCCCCCccC
Q psy817          266 GMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKC---QSVECMEMLLRKGSQVNASDC  342 (854)
Q Consensus       266 ~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~  342 (854)
                                    +++..++..++.+.++.++..+......+..|.||||+|+..   +..+++++|+++|++++..|.
T Consensus       180 --------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~  245 (351)
T 3utm_A          180 --------------HSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNK  245 (351)
T ss_dssp             --------------HHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCT
T ss_pred             --------------cHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCC
Confidence                          678889999999999999988777777888999999999999   558999999999999999999


Q ss_pred             CCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Q psy817          343 DNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIM  420 (854)
Q Consensus       343 ~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~  420 (854)
                      .|.||||.|+..|  +.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|.
T Consensus       246 ~g~t~L~~A~~~g--~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a~  321 (351)
T 3utm_A          246 DFMTPLHVAAERA--HNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGN  321 (351)
T ss_dssp             TCCCHHHHHHHTT--CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHSC
T ss_pred             CCCCHHHHHHHcC--CHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhhh
Confidence            9999999999999  788999999999999999999999999999999999999999999999999999999999983

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=1.3e-40  Score=351.78  Aligned_cols=265  Identities=26%  Similarity=0.308  Sum_probs=188.4

Q ss_pred             CCChHHHHHHHcCCCChhHHHHHhhhc-----c-cccCCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCccHHHHHHH
Q psy817           90 SGDVNVLYAIENSLYEPDEMATLFSKA-----S-QAEKTTALLWCVFVKREDLLDALHQLGADLSN---DKYGALHLAAF  160 (854)
Q Consensus        90 ~g~~~l~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~---~g~t~L~~A~~  160 (854)
                      .|.+.+..++..|+.  +.+..++...     . +..|.||||+|+..|+.+++++|+++|++++.   +|.||||+|+.
T Consensus         4 ~g~~~L~~A~~~g~~--~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~   81 (285)
T 1wdy_A            4 EDNHLLIKAVQNEDV--DLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAI   81 (285)
T ss_dssp             HHHHHHHHHHHTTCH--HHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred             ccchHHHHHHHcCCH--HHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence            467889999999986  4455555422     2 56688999999999999999999999999864   89999999999


Q ss_pred             cCCHHHHHHHHhCCCCccccC-CCccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCC
Q psy817          161 NGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVL  239 (854)
Q Consensus       161 ~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~  239 (854)
                      .|+.+++++|+++|++++..+ .|.||||+|+..|+.+++++|+++|+++....       ...+          +.+..
T Consensus        82 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-------~~~~----------~~~~~  144 (285)
T 1wdy_A           82 AGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRR-------KTKE----------DQERL  144 (285)
T ss_dssp             HTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCC-------CCCH----------HHHHT
T ss_pred             cCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCccccc-------ccHH----------HHHhh
Confidence            999999999999999998765 58899999988888888888887776541000       0000          00011


Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCC----HHHHHHHHhcCCCcCCCCCCCCCHH
Q psy817          240 NNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGY----VECLRILLENHANCNERNHKEQIPL  315 (854)
Q Consensus       240 d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~----~~~v~~Ll~~~~~~~~~~~~g~t~L  315 (854)
                      +..|.||||.|+..|+.+++++|+++.+++++..+ ..|.||||+|+..|+    .+++++|+++|++++.++..|.|||
T Consensus       145 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L  223 (285)
T 1wdy_A          145 RKGGATALMDAAEKGHVEVLKILLDEMGADVNACD-NMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPL  223 (285)
T ss_dssp             TCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCC-TTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHH
T ss_pred             ccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccC-CCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHH
Confidence            45566666666666666666666665446666554 334566666666666    6666666666666666666666666


Q ss_pred             HHHHhcCCHHHHHHHHh-CCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCC
Q psy817          316 HLAAKCQSVECMEMLLR-KGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARD  376 (854)
Q Consensus       316 ~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d  376 (854)
                      |+|+..|+.+++++|++ .|++++..|..|.||||.|+..+  +.+++++|+++|++++.+|
T Consensus       224 ~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~--~~~i~~~Ll~~Ga~~~~~d  283 (285)
T 1wdy_A          224 ILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELK--LKKIAELLCKRGASTDCGD  283 (285)
T ss_dssp             HHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTT--CHHHHHHHHHHSSCSCCSS
T ss_pred             HHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcC--cHHHHHHHHHcCCCCCccc
Confidence            66666666666666666 56666666666666666666666  5566666666666666655

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=100.00  E-value=1.1e-38  Score=348.08  Aligned_cols=326  Identities=24%  Similarity=0.280  Sum_probs=264.1

Q ss_pred             hccccchhhchhhhHHHHHHHHHhcCCChHHHHHHHcC-CCChhHHHHHhhhcccccCCcHHHHHHHcCCHHHHHHHHHc
Q psy817           65 ISDELSYKVCKESIRASLLEAMKMSSGDVNVLYAIENS-LYEPDEMATLFSKASQAEKTTALLWCVFVKREDLLDALHQL  143 (854)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~  143 (854)
                      ..+.......+.....+|+.+++  .|+...+..+... ..+        .+..+..|.||||+|+..|+.+++++|+++
T Consensus        11 ~~~~~~~~~~~~~~~~~L~~A~~--~g~~~~v~~ll~~~~~~--------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~   80 (351)
T 3utm_A           11 ADPSAKAVLTGEYKKDELLEAAR--SGNEEKLMALLTPLNVN--------CHASDGRKSTPLHLAAGYNRVRIVQLLLQH   80 (351)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHH--HTCHHHHHHHCCTTTTT--------CCCSSTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             cCCceeeeeeccccchhHHHHHH--cCCHHHHHHHHHhcCCC--------cccCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence            33444445555666667776663  4555544443321 221        134677899999999999999999999999


Q ss_pred             CCCCCC---CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHhCCCHHHHHHHHhCCCCC------CchH
Q psy817          144 GADLSN---DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGNYVDCAKFLIKNKAHI------HETI  213 (854)
Q Consensus       144 g~~~~~---~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~~~~~iv~~Ll~~~~~~------~~t~  213 (854)
                      |++++.   +|.||||+|+..|+.+++++|+++|++++..+ .|.||||+|+..|+.+++++|+++|+++      |.++
T Consensus        81 g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~  160 (351)
T 3utm_A           81 GADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSA  160 (351)
T ss_dssp             TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred             CCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcc
Confidence            999865   89999999999999999999999999999766 5999999999999999999999999887      7899


Q ss_pred             HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHc---CC
Q psy817          214 VHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAEN---GY  290 (854)
Q Consensus       214 L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~---g~  290 (854)
                      ++.|+..+..+.+++...            .+++..++..++.+.++.++....  .+......|.||||+|+..   ++
T Consensus       161 l~~a~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~t~L~~A~~~~~~~~  226 (351)
T 3utm_A          161 VDMAPTPELRERLTYEFK------------GHSLLQAAREADLAKVKKTLALEI--INFKQPQSHETALHCAVASLHPKR  226 (351)
T ss_dssp             HHHCSSHHHHHHHHHHHH------------HHHHHHHHHTTCHHHHHHHTTTCC--TTCCCTTTCCCHHHHHHHCCSTTH
T ss_pred             hHHHhhhhhHHHHHhhhc------------ccHHHHHHHhccHHHHHHHHHhhc--ccccCCCCCCCHHHHHHHHhCccH
Confidence            999999999988888764            357889999999999999998763  3333456678999999999   55


Q ss_pred             HHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCC
Q psy817          291 VECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGA  370 (854)
Q Consensus       291 ~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~  370 (854)
                      .+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..+  +.+++++|+++|+
T Consensus       227 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~--~~~~v~~Ll~~ga  304 (351)
T 3utm_A          227 KQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAG--HLQTCRLLLSYGS  304 (351)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT--CHHHHHHHHHTTC
T ss_pred             HHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC--cHHHHHHHHHcCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999  8899999999999


Q ss_pred             CCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcC
Q psy817          371 NVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNT  423 (854)
Q Consensus       371 d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~  423 (854)
                      +++.+|..|.||+++|    +.+++++|.+.+..   ....+.+++..|++++
T Consensus       305 d~~~~~~~g~tal~~a----~~~~~~~l~~~~~~---~~~~~~~~l~~A~~~g  350 (351)
T 3utm_A          305 DPSIISLQGFTAAQMG----NEAVQQILSESTPM---RTSDVDYRLLEASKAG  350 (351)
T ss_dssp             CTTCCCTTSCCHHHHS----CHHHHHHHHHC----------------------
T ss_pred             CCCCcCCCCCChhhhh----hHHHHHHHHhcccc---ccCcceeehhhhhccC
Confidence            9999999999999998    67899999987654   2345667887777654

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=100.00  E-value=1.1e-39  Score=358.38  Aligned_cols=275  Identities=20%  Similarity=0.197  Sum_probs=155.4

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHcCCCCCCCCccHHHHHHHcCCHHHHHHHHhCCCCccccC--CCccHHHHHHhCCCHHHH
Q psy817          122 TTALLWCVFVKREDLLDALHQLGADLSNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTK--DSYTPLHFAVLGNYVDCA  199 (854)
Q Consensus       122 ~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~--~g~t~L~~A~~~~~~~iv  199 (854)
                      .+++.-+...|+.+++++++....  +..|.||||.|+..|+ +++++|++.  ++|..+  .|.||||+|+..|+.+++
T Consensus        67 ~~~~~~~~~~g~~~~~~~~~~~~~--~~~g~t~L~~Aa~~~~-~~~~~L~~~--~~n~~d~~~g~t~Lh~Aa~~g~~~~v  141 (373)
T 2fo1_E           67 QGYGNGNDFLGDFNHTNLQIPTEP--EPESPIKLHTEAAGSY-AITEPITRE--SVNIIDPRHNRTVLHWIASNSSAEKS  141 (373)
T ss_dssp             -----------------------------CCCHHHHHHHSSS-CCCSCCSTT--TTTTCCCSSCCCHHHHHHCTTCCSCC
T ss_pred             cccCCCCCccccccccccccccCC--CCCCccHHHHHhcCCc-hHHHHhccc--cccccCCcCCCCHHHHHHHCCCHHHH
Confidence            345666788889999888876543  4578999999998554 788888654  454444  589999999999998888


Q ss_pred             HHHH--------hCCCCC------CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy817          200 KFLI--------KNKAHI------HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDS  265 (854)
Q Consensus       200 ~~Ll--------~~~~~~------~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~  265 (854)
                      ++|+        ++|+++      |.||||+|+..|+.++|++|+++|++++..|..|.||||+|+..|+.+++++|+++
T Consensus       142 ~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~  221 (373)
T 2fo1_E          142 EDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNS  221 (373)
T ss_dssp             TTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhc
Confidence            8776        444443      45566666666666666666666666666666666666666666666666666654


Q ss_pred             CC--CCccccccCCcCcHHHHHHHcC---CHHHHHHHHhcCCCcCC--------CCCCCCCHHHHHHhcCCHHHHHHHHh
Q psy817          266 GM--ADVDIKTKERRVTALHLAAENG---YVECLRILLENHANCNE--------RNHKEQIPLHLAAKCQSVECMEMLLR  332 (854)
Q Consensus       266 ~~--~~~~~~~~~~~~t~L~~A~~~g---~~~~v~~Ll~~~~~~~~--------~~~~g~t~L~~A~~~~~~~~v~~Ll~  332 (854)
                      +.  ++++..+ ..|.||||+|+..|   +.+++++|+++|++++.        .|..|.||||+|+..|+.+++++|++
T Consensus       222 ~~~~~~~~~~d-~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~  300 (373)
T 2fo1_E          222 TKLKGDIEELD-RNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVG  300 (373)
T ss_dssp             HHHHHTTSCCC-TTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHH
T ss_pred             CccccChhhcC-CCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHH
Confidence            31  3444333 33446666666655   56666666666665543        34456666666666666666666665


Q ss_pred             CC-CCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy817          333 KG-SQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD  404 (854)
Q Consensus       333 ~g-~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~  404 (854)
                      ++ ++++..|..|.||||+|+..|  +.+++++|+++|++++.+|..|.||||+|+.+|+.+++++|+++|++
T Consensus       301 ~~~~~~n~~d~~g~TpL~~A~~~g--~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~  371 (373)
T 2fo1_E          301 EKGSNKDKQDEDGKTPIMLAAQEG--RIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE  371 (373)
T ss_dssp             HSCCCTTCCCTTCCCHHHHHHHHT--CHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred             hcCCCccCcCCCCCCHHHHHHHcC--CHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence            53 566666666666666666666  55556666666666666666666666666666666666666666554

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.4e-38  Score=335.90  Aligned_cols=256  Identities=25%  Similarity=0.390  Sum_probs=187.7

Q ss_pred             ccccCCcHHHHHHHcCCHHHHHHHHHcCCC--------------CCCCCccHHHHHHHcCCHHHHHHHHhCCCCccccC-
Q psy817          117 SQAEKTTALLWCVFVKREDLLDALHQLGAD--------------LSNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-  181 (854)
Q Consensus       117 ~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~--------------~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-  181 (854)
                      ....|.|+||+|+..|+.+.+..++..+.+              .+.+|+||||+|+..|+.+++++|+++|++++..+ 
T Consensus        11 ~~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~   90 (285)
T 3d9h_A           11 SSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITA   90 (285)
T ss_dssp             -------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECT
T ss_pred             cchHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence            345688899999998886666655443321              13378888888888888888888888888887655 


Q ss_pred             CCccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHH
Q psy817          182 DSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKA  261 (854)
Q Consensus       182 ~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~  261 (854)
                      +|.||||+|+..|+                           .+++++|+++|++++..|..|.||||+|+..|+.+++++
T Consensus        91 ~g~t~L~~A~~~g~---------------------------~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~  143 (285)
T 3d9h_A           91 DHVSPLHEACLGGH---------------------------LSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNL  143 (285)
T ss_dssp             TCCCHHHHHHHTTC---------------------------HHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred             CCCCHHHHHHHCCc---------------------------HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHH
Confidence            46666666666554                           555555555667788889999999999999999999999


Q ss_pred             HHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCcc
Q psy817          262 ILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASD  341 (854)
Q Consensus       262 Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~  341 (854)
                      |++++ ++++...  .|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++. +
T Consensus       144 Ll~~g-~~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~  219 (285)
T 3d9h_A          144 LLQHG-ASVQPES--DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-G  219 (285)
T ss_dssp             HHHTT-CCSSCSC--TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-C
T ss_pred             HHHCC-CCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-C
Confidence            99986 6666543  477999999999999999999999999999999999999999999999999999999999985 8


Q ss_pred             CCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccc
Q psy817          342 CDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMH-GADISS  407 (854)
Q Consensus       342 ~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~  407 (854)
                      ..|.||||.|+..+  +.+++++|+++|++++.+|..|.||||+|+  ++.+++++|+++ |+++..
T Consensus       220 ~~g~t~L~~A~~~~--~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~l~~  282 (285)
T 3d9h_A          220 KGQDSPLHAVVRTA--SEELACLLMDFGADTQAKNAEGKRPVELVP--PESPLAQLFLEREGASLPK  282 (285)
T ss_dssp             BTTBCHHHHHHHTT--CHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC------
T ss_pred             CCCCCHHHHHHHcC--CHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhccCCCC
Confidence            88999999999999  788899999999999999999999999998  456899999998 777654

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=100.00  E-value=2.4e-39  Score=355.76  Aligned_cols=304  Identities=19%  Similarity=0.222  Sum_probs=228.3

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHcCCCCCCCCccHHHHHHHcCCHHHHHHHHhCCCCccccCCCccHHHHHHhCCCHHHHHH
Q psy817          122 TTALLWCVFVKREDLLDALHQLGADLSNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKF  201 (854)
Q Consensus       122 ~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~iv~~  201 (854)
                      ..+|+.|+..|+.+.++.++++....+ ...+++.-+...|+.+++++++....    ...|.||||.|+.+++ +++++
T Consensus        38 ~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~g~t~L~~Aa~~~~-~~~~~  111 (373)
T 2fo1_E           38 QHSLLEASYDGYIKRQRNELQHYSLYP-NPQGYGNGNDFLGDFNHTNLQIPTEP----EPESPIKLHTEAAGSY-AITEP  111 (373)
T ss_dssp             -------------------------------------------------------------CCCHHHHHHHSSS-CCCSC
T ss_pred             ccccccccCCccccchhhhhhhhcccc-CccccCCCCCccccccccccccccCC----CCCCccHHHHHhcCCc-hHHHH
Confidence            356777778899999998888776654 23456788889999999999977644    2358999999999665 78888


Q ss_pred             HHhCCCC-----CCchHHHHHHHcCCHHHHHHHH--------HCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy817          202 LIKNKAH-----IHETIVHSAVSTNAVDCVQLLL--------SLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMA  268 (854)
Q Consensus       202 Ll~~~~~-----~~~t~L~~A~~~~~~~~v~~Ll--------~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~  268 (854)
                      |++...+     .|.||||+|+..|+.+++++|+        ++|+++|..|..|.||||+|+..|+.+++++|++++ +
T Consensus       112 L~~~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g-a  190 (373)
T 2fo1_E          112 ITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAG-A  190 (373)
T ss_dssp             CSTTTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-C
T ss_pred             hccccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCC-C
Confidence            8765432     3889999999999998888776        889999999999999999999999999999999986 8


Q ss_pred             CccccccCCcCcHHHHHHHcCCHHHHHHHHhcC---CCcCCCCCCCCCHHHHHHhcC---CHHHHHHHHhCCCCCCC---
Q psy817          269 DVDIKTKERRVTALHLAAENGYVECLRILLENH---ANCNERNHKEQIPLHLAAKCQ---SVECMEMLLRKGSQVNA---  339 (854)
Q Consensus       269 ~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~---~~~~~~~~~g~t~L~~A~~~~---~~~~v~~Ll~~g~~~~~---  339 (854)
                      +++..+ ..|.||||+|+..|+.+++++|++++   ++++..|..|.||||+|+..+   +.+++++|+++|++++.   
T Consensus       191 ~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~  269 (373)
T 2fo1_E          191 DPTIYN-KSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGA  269 (373)
T ss_dssp             CSCCCC-TTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSG
T ss_pred             CCcccC-CCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccc
Confidence            898776 46779999999999999999999998   799999999999999999998   89999999999999886   


Q ss_pred             -----ccCCCCcHHHHHHhcCCCChHHHHHHHhCC-CCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCC
Q psy817          340 -----SDCDNRTPLHASLSKNILSVHPLEILLKWG-ANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGS  413 (854)
Q Consensus       340 -----~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g-~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~  413 (854)
                           .|..|.||||.|+..|  +.+++++|+++| +++|.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.
T Consensus       270 ~~~~~~d~~g~t~Lh~A~~~g--~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~  347 (373)
T 2fo1_E          270 ARKDSEKYKGRTALHYAAQVS--NMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDH  347 (373)
T ss_dssp             GGTSSSSCCCCCTHHHHHSSC--CHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSC
T ss_pred             cccCcccccCCCHHHHHHHhC--CHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCC
Confidence                 5678999999999999  889999999876 99999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHhcCCcchHHhhhhcC
Q psy817          414 SALSIIMRNTPSSISSVRKKLD  435 (854)
Q Consensus       414 t~l~~a~~~~~~~~~~~~~~~~  435 (854)
                      |||++|+.+++.+++.++....
T Consensus       348 t~l~~A~~~g~~~iv~~Ll~~~  369 (373)
T 2fo1_E          348 TARQLAQANNHHNIVDIFDRCR  369 (373)
T ss_dssp             CHHHHHHHTTCHHHHHHHHTTC
T ss_pred             CHHHHHHHcCCHHHHHHHHhcC
Confidence            9999999999999988876654

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=100.00  E-value=1.4e-39  Score=357.17  Aligned_cols=286  Identities=21%  Similarity=0.176  Sum_probs=200.9

Q ss_pred             HhhhcccccCCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCccHHHHHHHcCCHHHHHHHHhCCCCccccCCCccHHH
Q psy817          112 LFSKASQAEKTTALLWCVFVKREDLLDALHQLGADLSN---DKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLH  188 (854)
Q Consensus       112 ~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~---~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~g~t~L~  188 (854)
                      +..+..|..|.||||+||..|+.++|++|+++|+++|.   .|.||||+|+..|+.++|++|+++|++++. .+|.||||
T Consensus        11 ~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~g~t~L~   89 (364)
T 3ljn_A           11 LNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL-WHGQKPIH   89 (364)
T ss_dssp             -----CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC-BTTBCHHH
T ss_pred             CCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc-cCCCCHHH
Confidence            33456678899999999999999999999999999865   899999999999999999999999997763 36899999


Q ss_pred             HHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHHcC
Q psy817          189 FAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRG--LISCLKAILDSG  266 (854)
Q Consensus       189 ~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g--~~~iv~~Ll~~~  266 (854)
                      +|+..|+.+++++|++++++.|..+-..........      ....+++..|..|.||||+|+..|  +.+++++|++++
T Consensus        90 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~g  163 (364)
T 3ljn_A           90 LAVMANKTDLVVALVEGAKERGQMPESLLNECDERE------VNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLG  163 (364)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCC------EEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHT
T ss_pred             HHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHh------hhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcC
Confidence            999999999999999984332221111000000000      001223335556666666666666  666666666664


Q ss_pred             CCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCC-----cCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCcc
Q psy817          267 MADVDIKTKERRVTALHLAAENGYVECLRILLENHAN-----CNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASD  341 (854)
Q Consensus       267 ~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~  341 (854)
                       ++++.++ ..|.||||+|+..|+.+++++|+++|++     ++..|..|.||||+|+..|+.+++++|+++|++++..|
T Consensus       164 -a~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d  241 (364)
T 3ljn_A          164 -ASPTAKD-KADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMED  241 (364)
T ss_dssp             -CCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCC
T ss_pred             -CCCcccC-CCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence             6666554 3445677777766777777777766666     66666667777777777777777777777777777667


Q ss_pred             CCCCcHHHHHHhcCCCChHHHHHHHhCCCCCcc------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc
Q psy817          342 CDNRTPLHASLSKNILSVHPLEILLKWGANVNA------------RDIFGYSPIHIAALSELSQCVDCLIMHGADISSK  408 (854)
Q Consensus       342 ~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~------------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~  408 (854)
                      ..|.||||+|+..|  +.+++++|+++|++++.            .+..++||+++|+..|+.+.+..|+..+++....
T Consensus       242 ~~g~tpL~~A~~~g--~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v~~ll~~~~~~~~~  318 (364)
T 3ljn_A          242 NEHTVPLYLSVRAA--MVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDEVVR  318 (364)
T ss_dssp             TTSCCHHHHHHHTC--CHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCHHHHHHHhC--hHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccCHHHHHHHHHHHHHHHhh
Confidence            77777777777766  56667777766654422            4567889999999999888888888877665443

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=100.00  E-value=6.2e-37  Score=323.34  Aligned_cols=216  Identities=26%  Similarity=0.343  Sum_probs=196.9

Q ss_pred             CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcC
Q psy817          210 HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENG  289 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g  289 (854)
                      |.||||.|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|++++ ++++.++ ..|.||||+|+..|
T Consensus        59 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~-~~g~t~L~~A~~~~  136 (285)
T 3d9h_A           59 DWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHG-AQVNGVT-ADWHTPLFNACVSG  136 (285)
T ss_dssp             SCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTT-CCSSCCC-TTCCCHHHHHHHHT
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCC-CCCCCCC-CCCCCHHHHHHHcC
Confidence            677777788888888888888889999999999999999999999999999999986 8888776 45679999999999


Q ss_pred             CHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCC
Q psy817          290 YVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWG  369 (854)
Q Consensus       290 ~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g  369 (854)
                      +.+++++|+++|++++..+ .|.||||+|+..|+.+++++|+++|++++..|..|.||||.|+..+  +.+++++|+++|
T Consensus       137 ~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~--~~~~v~~Ll~~g  213 (285)
T 3d9h_A          137 SWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQ--QRACVKKLLESG  213 (285)
T ss_dssp             CHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTT--CHHHHHHHHHTT
T ss_pred             HHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC--cHHHHHHHHHCC
Confidence            9999999999999987654 5999999999999999999999999999999999999999999999  889999999999


Q ss_pred             CCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHHhhhh
Q psy817          370 ANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKK  433 (854)
Q Consensus       370 ~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~  433 (854)
                      ++++. |..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|+.+  .++..++..
T Consensus       214 a~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~--~~~~~~Ll~  274 (285)
T 3d9h_A          214 ADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPE--SPLAQLFLE  274 (285)
T ss_dssp             CCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT--SHHHHHHHH
T ss_pred             CCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhcCc--cHHHHHHHH
Confidence            99995 88999999999999999999999999999999999999999999843  344444433

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=100.00  E-value=7.1e-37  Score=317.20  Aligned_cols=190  Identities=25%  Similarity=0.317  Sum_probs=146.8

Q ss_pred             CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcC
Q psy817          210 HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENG  289 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g  289 (854)
                      |.||||.|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++++..+++..+ ..|.||||+|+..|
T Consensus        57 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~~  135 (253)
T 1yyh_A           57 GETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARM-HDGTTPLILAARLA  135 (253)
T ss_dssp             SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCC-TTCCCHHHHHHHHT
T ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccC-CCCCcHHHHHHHcC
Confidence            34444445555555566666666677777888888888888888888888888887755666654 34568888888888


Q ss_pred             CHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCC
Q psy817          290 YVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWG  369 (854)
Q Consensus       290 ~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g  369 (854)
                      +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||.|+..+  +.+++++|+++|
T Consensus       136 ~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~--~~~~v~~Ll~~g  213 (253)
T 1yyh_A          136 VEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREG--SYETAKVLLDHF  213 (253)
T ss_dssp             CSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT--CHHHHHHHHHTT
T ss_pred             hHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCC--CHHHHHHHHHcC
Confidence            888888888888888888888888888888888888888888888888888888888888888887  677788888888


Q ss_pred             CCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q psy817          370 ANVNARDIFGYSPIHIAALSELSQCVDCLIMHG  402 (854)
Q Consensus       370 ~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g  402 (854)
                      ++++.+|..|.||+++|+..|+.+++++|.+..
T Consensus       214 a~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~  246 (253)
T 1yyh_A          214 ANRDITDHMDRLPRDIAQERMHHDIVRLLDLEH  246 (253)
T ss_dssp             CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC--
T ss_pred             CCccccccCCCCHHHHHHHcCCHHHHHHHHHHh
Confidence            888888888888888888888888888887654

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=100.00  E-value=4.6e-37  Score=324.31  Aligned_cols=238  Identities=24%  Similarity=0.232  Sum_probs=152.5

Q ss_pred             cccccCCcHHHHHHHcCCHHHHHHHHHcCCC---CC---CCCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHH
Q psy817          116 ASQAEKTTALLWCVFVKREDLLDALHQLGAD---LS---NDKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLH  188 (854)
Q Consensus       116 ~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~---~~---~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~  188 (854)
                      ..+..|.||||+|+..|+.++|++|+++|++   ++   ..|.||||+|+..|+.+++++|+++|++++..+ .|.||||
T Consensus         4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~   83 (282)
T 1oy3_D            4 YVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALH   83 (282)
T ss_dssp             CCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHH
T ss_pred             ccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence            4678899999999999999999999999987   43   389999999999999999999999999999776 5999999


Q ss_pred             HHHhCCCHHHHHHHHhCCCCC-------------------CchHHHHHHHcCCHH-HHHHHHHCCCCCCCCCCCCCcHHH
Q psy817          189 FAVLGNYVDCAKFLIKNKAHI-------------------HETIVHSAVSTNAVD-CVQLLLSLQINPNVLNNKGVSPLH  248 (854)
Q Consensus       189 ~A~~~~~~~iv~~Ll~~~~~~-------------------~~t~L~~A~~~~~~~-~v~~Ll~~g~~~~~~d~~g~t~L~  248 (854)
                      +|+..|+.+++++|+++|++.                   +.++++.++..+... ....+...+++++..|..|.||||
T Consensus        84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~  163 (282)
T 1oy3_D           84 LACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLH  163 (282)
T ss_dssp             HHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHH
T ss_pred             HHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHH
Confidence            999999999999999998764                   223333333332222 222222335555555666666666


Q ss_pred             HHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHH
Q psy817          249 IAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECME  328 (854)
Q Consensus       249 ~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~  328 (854)
                      +|+..|+.+++++|++++ ++++..+...|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.++++
T Consensus       164 ~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~  242 (282)
T 1oy3_D          164 VAVIHKDAEMVRLLRDAG-ADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILAR  242 (282)
T ss_dssp             HHHHTTCHHHHHHHHHHT-CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHH
T ss_pred             HHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHH
Confidence            666666666666666554 5555554444556666666666666666666666666666666666666666666666666


Q ss_pred             HHHhCCCCCCCccCCCCcHHHHHHhc
Q psy817          329 MLLRKGSQVNASDCDNRTPLHASLSK  354 (854)
Q Consensus       329 ~Ll~~g~~~~~~~~~g~t~L~~a~~~  354 (854)
                      +|+++|++++..+..|.||++.|...
T Consensus       243 ~Ll~~ga~~~~~~~~g~tpl~~a~~~  268 (282)
T 1oy3_D          243 LLRAHGAPEPEDGGDKLSPCSSSGSD  268 (282)
T ss_dssp             HHHHTTCCCCCCC-------------
T ss_pred             HHHHcCCCcCcCCCcccccccccCCc
Confidence            66666666666666666666655544

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=100.00  E-value=5.7e-37  Score=336.39  Aligned_cols=246  Identities=18%  Similarity=0.210  Sum_probs=204.5

Q ss_pred             CCCCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHH
Q psy817          148 SNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCV  226 (854)
Q Consensus       148 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v  226 (854)
                      |.+|.||||+||..|+.++|++|+++|++++..+ +|.||||+|+..|+.+++++|+++|++.                 
T Consensus        17 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-----------------   79 (364)
T 3ljn_A           17 DDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVH-----------------   79 (364)
T ss_dssp             CHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC-----------------
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc-----------------
Confidence            3378999999999999999999999999998766 5888888888888777777777776643                 


Q ss_pred             HHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcC---CCCccc-----------------cccCCcCcHHHHHH
Q psy817          227 QLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSG---MADVDI-----------------KTKERRVTALHLAA  286 (854)
Q Consensus       227 ~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~---~~~~~~-----------------~~~~~~~t~L~~A~  286 (854)
                                +  +.+|.||||+|+..|+.+++++|++++   +.+++.                 .+ ..|.||||+|+
T Consensus        80 ----------~--~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~L~~A~  146 (364)
T 3ljn_A           80 ----------S--LWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKH-CKGQTALHWCV  146 (364)
T ss_dssp             ----------C--CBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEE-ESCCCHHHHHH
T ss_pred             ----------c--ccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCC-CCCCCHHHHHH
Confidence                      1  224556666666666666666666551   133332                 33 45779999999


Q ss_pred             HcC--CHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCC-----CCCccCCCCcHHHHHHhcCCCCh
Q psy817          287 ENG--YVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQ-----VNASDCDNRTPLHASLSKNILSV  359 (854)
Q Consensus       287 ~~g--~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~a~~~~~~~~  359 (854)
                      ..|  +.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++     ++..|..|+||||+|+..|  +.
T Consensus       147 ~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g--~~  224 (364)
T 3ljn_A          147 GLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILIN--WE  224 (364)
T ss_dssp             HSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTT--CH
T ss_pred             HcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcC--CH
Confidence            999  99999999999999999999999999999999999999999999998     9999999999999999999  88


Q ss_pred             HHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc------------cCCCCCCHHHHHHhcCCc
Q psy817          360 HPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISS------------KTPSGSSALSIIMRNTPS  425 (854)
Q Consensus       360 ~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------------~~~~g~t~l~~a~~~~~~  425 (854)
                      +++++|+++|+|+|.+|..|.||||+|+..|+.+++++|+++|++++.            .+..+.+|+..|+..+..
T Consensus       225 ~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~  302 (364)
T 3ljn_A          225 DVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSK  302 (364)
T ss_dssp             HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHH
T ss_pred             HHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccCH
Confidence            999999999999999999999999999999999999999999987643            345667777776665533

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=100.00  E-value=2.9e-36  Score=312.65  Aligned_cols=217  Identities=25%  Similarity=0.314  Sum_probs=122.3

Q ss_pred             hcccccCCcHHHHHHHcC-------------CHHHHHHHHHcCCCCC----CCCccHHHHHHHcCCHHHHHHHHhCCCCc
Q psy817          115 KASQAEKTTALLWCVFVK-------------REDLLDALHQLGADLS----NDKYGALHLAAFNGSIKGCSWLMLHGHDI  177 (854)
Q Consensus       115 ~~~~~~~~t~L~~Aa~~g-------------~~~iv~~Ll~~g~~~~----~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~  177 (854)
                      +.+|.+|.||||+|+..|             +.+++++|+++|++++    ..|.||||+|+..|+.+++++|+++|+++
T Consensus         4 n~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~   83 (253)
T 1yyh_A            4 NVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA   83 (253)
T ss_dssp             ------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred             CCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            356778999999999987             7888888888888763    37888888888888888888888888888


Q ss_pred             cccC-CCccHHHHHHhCCCHHHHHHHHhCCC-CC------CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Q psy817          178 NFTK-DSYTPLHFAVLGNYVDCAKFLIKNKA-HI------HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHI  249 (854)
Q Consensus       178 ~~~~-~g~t~L~~A~~~~~~~iv~~Ll~~~~-~~------~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~  249 (854)
                      +..+ .|.||||+|+..|+.+++++|+++|+ ++      |.||||.|+..|+.+++++|+++|++++..|..|.||||+
T Consensus        84 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~  163 (253)
T 1yyh_A           84 NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHW  163 (253)
T ss_dssp             TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHH
T ss_pred             CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence            7665 47888888888887777777777765 22      5566666666666666666666666666666666666666


Q ss_pred             HHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHH
Q psy817          250 AADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEM  329 (854)
Q Consensus       250 A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~  329 (854)
                      |+..|+.+++++|+++| ++++.++ ..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|+.+|+.+++++
T Consensus       164 A~~~~~~~~v~~Ll~~g-a~~~~~~-~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~  241 (253)
T 1yyh_A          164 AAAVNNVDAAVVLLKNG-ANKDMQN-NREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRL  241 (253)
T ss_dssp             HHHHTCHHHHHHHHHTT-CCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred             HHHcCCHHHHHHHHHcC-CCCCCcC-CCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHH
Confidence            66666666666666654 5555543 334466666666666666666666666666666666666666666666666666


Q ss_pred             HHhC
Q psy817          330 LLRK  333 (854)
Q Consensus       330 Ll~~  333 (854)
                      |.+.
T Consensus       242 l~~~  245 (253)
T 1yyh_A          242 LDLE  245 (253)
T ss_dssp             HHC-
T ss_pred             HHHH
Confidence            6544

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=100.00  E-value=5.7e-36  Score=308.05  Aligned_cols=226  Identities=22%  Similarity=0.267  Sum_probs=130.4

Q ss_pred             cccccCCcHHHHHHHcCCHHHHHHHHH----cCCCCCC---CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHH
Q psy817          116 ASQAEKTTALLWCVFVKREDLLDALHQ----LGADLSN---DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPL  187 (854)
Q Consensus       116 ~~~~~~~t~L~~Aa~~g~~~iv~~Ll~----~g~~~~~---~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L  187 (854)
                      ..|.+|.||||+|+..|+.+++++|++    .|++++.   .|.||||+|+..|+.+++++|+++|++++..+ +|.|||
T Consensus         4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l   83 (241)
T 1k1a_A            4 RADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAA   83 (241)
T ss_dssp             ---CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred             ccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHH
Confidence            456677788888888888888777776    5666644   67777777777777777777777777777654 467777


Q ss_pred             HHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q psy817          188 HFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGM  267 (854)
Q Consensus       188 ~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~  267 (854)
                      |+|+..|+.+++++|+++++..                       +.+++..|..|.||||+|+..|+.+++++|++++ 
T Consensus        84 ~~A~~~~~~~~~~~Ll~~~~~~-----------------------~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-  139 (241)
T 1k1a_A           84 HLACEHRSPTCLRALLDSAAPG-----------------------TLDLEARNYDGLTALHVAVNTECQETVQLLLERG-  139 (241)
T ss_dssp             HHHHHTTCHHHHHHHHHHSCTT-----------------------SCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-
T ss_pred             HHHHHcCCHHHHHHHHHcCCCc-----------------------cccccccCcCCCcHHHHHHHcCCHHHHHHHHHcC-
Confidence            7777777777666666665521                       2244555555555555555555555555555543 


Q ss_pred             CCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcH
Q psy817          268 ADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTP  347 (854)
Q Consensus       268 ~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~  347 (854)
                      ++++..+...|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||
T Consensus       140 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tp  219 (241)
T 1k1a_A          140 ADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTP  219 (241)
T ss_dssp             CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCT
T ss_pred             CCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCH
Confidence            44444433334455555555555555555555555555555555555555555555555555555555544444444444


Q ss_pred             HHHHHhcCCCChHHHHHHHh
Q psy817          348 LHASLSKNILSVHPLEILLK  367 (854)
Q Consensus       348 L~~a~~~~~~~~~~v~~Ll~  367 (854)
                      +|+|+..+  ..++++.|.+
T Consensus       220 l~~A~~~~--~~~i~~~l~~  237 (241)
T 1k1a_A          220 LMVARSRR--VIDILRGKAT  237 (241)
T ss_dssp             TTTCSSHH--HHHHHTC---
T ss_pred             HHHHHhcC--cHHHHhhhcc
Confidence            44444444  3334444433

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=100.00  E-value=4.2e-35  Score=300.79  Aligned_cols=220  Identities=26%  Similarity=0.366  Sum_probs=161.2

Q ss_pred             CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHH
Q psy817          150 DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQL  228 (854)
Q Consensus       150 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~  228 (854)
                      +|.||||+|+..|+.+++++|+++|++++..+ +|.||||+|+..|+                           .+++++
T Consensus        10 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---------------------------~~~v~~   62 (237)
T 3b7b_A           10 NKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNH---------------------------LEAVKY   62 (237)
T ss_dssp             CSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC---------------------------HHHHHH
T ss_pred             CCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCC---------------------------HHHHHH
Confidence            67777777777777777777777777776543 35555555555544                           444444


Q ss_pred             HHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCC
Q psy817          229 LLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERN  308 (854)
Q Consensus       229 Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~  308 (854)
                      |+++|++++..+..|.||||+|+..|+.+++++|++++..+++..+ ..|.||||+|+..|+.+++++|+++|++++.++
T Consensus        63 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~  141 (237)
T 3b7b_A           63 LIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQD-DGGWTPMIWATEYKHVDLVKLLLSKGSDINIRD  141 (237)
T ss_dssp             HHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred             HHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccC
Confidence            4555566677777788888888888888888888877666666554 345688888888888888888888888887778


Q ss_pred             CCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHH
Q psy817          309 HKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAAL  388 (854)
Q Consensus       309 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~  388 (854)
                      ..|.||||+|+..|+.+++++|+++|++++..|..|.||||.|+..+  +.+++++|+++|++++.+|..|.||||+|+.
T Consensus       142 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~  219 (237)
T 3b7b_A          142 NEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAAREN--RYDCVVLFLSRDSDVTLKNKEGETPLQCASL  219 (237)
T ss_dssp             TTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTT--CHHHHHHHHTTTCCTTCCCTTSCCHHHHSCT
T ss_pred             CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhC--CHhHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence            88888888888888888888888888888777777888888888777  6677888888888888778788888888887


Q ss_pred             cCCHHHHHHHH
Q psy817          389 SELSQCVDCLI  399 (854)
Q Consensus       389 ~~~~~~v~~Ll  399 (854)
                      +++.+.+..++
T Consensus       220 ~~~~~~~~~l~  230 (237)
T 3b7b_A          220 NSQVWSALQMS  230 (237)
T ss_dssp             TCHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            77765554444

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=100.00  E-value=8e-36  Score=314.76  Aligned_cols=247  Identities=22%  Similarity=0.226  Sum_probs=170.9

Q ss_pred             CCCCccHHHHHHHcCCHHHHHHHHhCCCC---ccccC-CCccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCH
Q psy817          148 SNDKYGALHLAAFNGSIKGCSWLMLHGHD---INFTK-DSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAV  223 (854)
Q Consensus       148 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~---~~~~~-~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~  223 (854)
                      |.+|+||||+|+..|+.++|++|+++|++   ++..+ .|.||||+|+..|+.++                         
T Consensus         6 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~-------------------------   60 (282)
T 1oy3_D            6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEAST-------------------------   60 (282)
T ss_dssp             CTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHH-------------------------
T ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHH-------------------------
Confidence            45788888888888888888888888877   44433 36666666665555555                         


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccc------------ccCCcCcHHHHHHHcCC-
Q psy817          224 DCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIK------------TKERRVTALHLAAENGY-  290 (854)
Q Consensus       224 ~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~------------~~~~~~t~L~~A~~~g~-  290 (854)
                        +++|+++|++++..|..|.||||+|+..|+.+++++|++++ ++....            ....+.++++.++..+. 
T Consensus        61 --v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (282)
T 1oy3_D           61 --VEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPR-PSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPE  137 (282)
T ss_dssp             --HHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSC-CSSCCCC-----------------------------
T ss_pred             --HHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccC-CCCchhhHHHHhhcccccCcchhcchhhhccccccc
Confidence              45555555566666777777777777777777777777655 221110            11233466776666554 


Q ss_pred             HHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCC-CCcHHHHHHhcCCCChHHHHHHHhCC
Q psy817          291 VECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCD-NRTPLHASLSKNILSVHPLEILLKWG  369 (854)
Q Consensus       291 ~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~a~~~~~~~~~~v~~Ll~~g  369 (854)
                      ......+...+.+++..+..|.||||+|+..|+.+++++|+++|++++..+.. |.||||.|+..+  +.+++++|+++|
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~--~~~~v~~Ll~~g  215 (282)
T 1oy3_D          138 NEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQ--AASVLELLLKAG  215 (282)
T ss_dssp             ------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT--CHHHHHHHHHTT
T ss_pred             hhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcC--CHHHHHHHHHcC
Confidence            34455666778899999999999999999999999999999999999998865 999999999999  889999999999


Q ss_pred             CCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCC
Q psy817          370 ANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTP  424 (854)
Q Consensus       370 ~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~  424 (854)
                      ++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||++.|.....
T Consensus       216 ad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~  270 (282)
T 1oy3_D          216 ADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSD  270 (282)
T ss_dssp             CCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC---------------
T ss_pred             CCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCccc
Confidence            9999999999999999999999999999999999999999999999999976543

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=100.00  E-value=4.1e-35  Score=299.52  Aligned_cols=226  Identities=26%  Similarity=0.290  Sum_probs=181.5

Q ss_pred             CCccHHHHHHHcCCHHHHHHHHhCCCC-ccccCCCccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHH
Q psy817          150 DKYGALHLAAFNGSIKGCSWLMLHGHD-INFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQL  228 (854)
Q Consensus       150 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~-~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~  228 (854)
                      .+.||||.|+..|+.+++++|++++.+ ++..+                          ..|.||||.|+..|+.+++++
T Consensus         5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~--------------------------~~g~t~L~~A~~~g~~~~v~~   58 (231)
T 3aji_A            5 VSNIMICNLAYSGKLDELKERILADKSLATRTD--------------------------QDSRTALHWACSAGHTEIVEF   58 (231)
T ss_dssp             CSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCC--------------------------TTSCCHHHHHHHHTCHHHHHH
T ss_pred             cccchHHHHHHhCCHHHHHHHHHhchhhhhcCC--------------------------CCCCCHHHHHHHcCcHHHHHH
Confidence            355667777777777777666665433 22222                          114455555555556666666


Q ss_pred             HHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCC
Q psy817          229 LLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERN  308 (854)
Q Consensus       229 Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~  308 (854)
                      |+++|++++..|..|.||||+|+..|+.+++++|++++ ++++.++ ..|.||||+|+..|+.+++++|+++|++++..+
T Consensus        59 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~  136 (231)
T 3aji_A           59 LLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKG-AHVNAVN-QNGCTPLHYAASKNRHEIAVMLLEGGANPDAKD  136 (231)
T ss_dssp             HHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred             HHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcC-CCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence            66677778888888999999999999999999999876 7777665 456699999999999999999999999999899


Q ss_pred             CCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHH
Q psy817          309 HKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAAL  388 (854)
Q Consensus       309 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~  388 (854)
                      ..|.||||+|+..|+.+++++|+++|++++..|..|.||||.|+..+  +.+++++|+++|++++.+|..|.||+++|+.
T Consensus       137 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~  214 (231)
T 3aji_A          137 HYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEE--RVEEAKFLVTQGASIYIENKEEKTPLQVAKG  214 (231)
T ss_dssp             TTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTT--CHHHHHHHHHTTCCSCCCCTTSCCHHHHSCH
T ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCC--CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHh
Confidence            99999999999999999999999999999999999999999999988  7888999999999999999999999999999


Q ss_pred             cCCHHHHHHHHHcCCCc
Q psy817          389 SELSQCVDCLIMHGADI  405 (854)
Q Consensus       389 ~~~~~~v~~Ll~~ga~~  405 (854)
                      .++.+++++|.++|+++
T Consensus       215 ~~~~~i~~lL~~~~a~i  231 (231)
T 3aji_A          215 GLGLILKRLAEGEEASM  231 (231)
T ss_dssp             HHHHHHHHHHHHHHHCC
T ss_pred             hHHHHHHHHHccccccC
Confidence            99999999999888763

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=100.00  E-value=3.1e-35  Score=302.49  Aligned_cols=226  Identities=25%  Similarity=0.411  Sum_probs=182.9

Q ss_pred             CCCCccHHHHHHHcCCHHHHHHHHh----CCCCccccC-CCccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCC
Q psy817          148 SNDKYGALHLAAFNGSIKGCSWLML----HGHDINFTK-DSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNA  222 (854)
Q Consensus       148 ~~~g~t~L~~A~~~g~~~iv~~Ll~----~g~~~~~~~-~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~  222 (854)
                      |.+|.||||+|+..|+.+++++|++    .|++++..+ +|.||||+|+..|                           +
T Consensus         6 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~---------------------------~   58 (241)
T 1k1a_A            6 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITT---------------------------L   58 (241)
T ss_dssp             -CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTT---------------------------C
T ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcC---------------------------C
Confidence            4578888888888888888888876    677777554 3566666655554                           4


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCC---CCccccccCCcCcHHHHHHHcCCHHHHHHHHh
Q psy817          223 VDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGM---ADVDIKTKERRVTALHLAAENGYVECLRILLE  299 (854)
Q Consensus       223 ~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~---~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~  299 (854)
                      .+++++|+++|++++..|..|.||||+|+..|+.+++++|++++.   .+++..+ ..|.||||+|+..|+.+++++|++
T Consensus        59 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~  137 (241)
T 1k1a_A           59 PSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARN-YDGLTALHVAVNTECQETVQLLLE  137 (241)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccC-cCCCcHHHHHHHcCCHHHHHHHHH
Confidence            555555556667778888899999999999999999999998873   1556554 456799999999999999999999


Q ss_pred             cCCCcCCCC-CCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCC
Q psy817          300 NHANCNERN-HKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIF  378 (854)
Q Consensus       300 ~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~  378 (854)
                      +|++++..+ ..|.||||+|+..|+.+++++|+++|++++..|..|.||||.|+..+  +.+++++|+++|++++.+|..
T Consensus       138 ~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~ga~~~~~~~~  215 (241)
T 1k1a_A          138 RGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRG--LLPLVRTLVRSGADSSLKNCH  215 (241)
T ss_dssp             TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHT--CHHHHHHHHHTTCCTTCCCTT
T ss_pred             cCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC--CHHHHHHHHhcCCCCCCcCCC
Confidence            999998888 78999999999999999999999999999999999999999999998  788899999999999999999


Q ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCC
Q psy817          379 GYSPIHIAALSELSQCVDCLIMHGA  403 (854)
Q Consensus       379 g~t~L~~A~~~~~~~~v~~Ll~~ga  403 (854)
                      |.||||+|+..|+.++++.|.++++
T Consensus       216 g~tpl~~A~~~~~~~i~~~l~~~~a  240 (241)
T 1k1a_A          216 NDTPLMVARSRRVIDILRGKATRPA  240 (241)
T ss_dssp             SCCTTTTCSSHHHHHHHTC------
T ss_pred             CCCHHHHHHhcCcHHHHhhhccCCC
Confidence            9999999999999999999888765

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=100.00  E-value=1.5e-34  Score=296.53  Aligned_cols=213  Identities=29%  Similarity=0.398  Sum_probs=198.8

Q ss_pred             CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcC
Q psy817          210 HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENG  289 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g  289 (854)
                      |.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++++ ++++.++ ..|.||||+|+..|
T Consensus        11 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~-~~g~t~L~~A~~~~   88 (237)
T 3b7b_A           11 KRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAG-ALVDPKD-AEGSTCLHLAAKKG   88 (237)
T ss_dssp             SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT-CCCCCCC-TTSCCHHHHHHHTT
T ss_pred             CCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCC-CCCCCCC-CCCCcHHHHHHHcC
Confidence            567777777777788888888888899999999999999999999999999999986 7888765 45679999999999


Q ss_pred             CHHHHHHHHhcC-CCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhC
Q psy817          290 YVECLRILLENH-ANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKW  368 (854)
Q Consensus       290 ~~~~v~~Ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~  368 (854)
                      +.+++++|+++| .+++..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||.|+..+  +.+++++|+++
T Consensus        89 ~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~~~~Ll~~  166 (237)
T 3b7b_A           89 HYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSG--CVDIAEILLAA  166 (237)
T ss_dssp             CHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHC--CHHHHHHHHTT
T ss_pred             CHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCC--CHHHHHHHHHc
Confidence            999999999998 889999999999999999999999999999999999999999999999999999  88999999999


Q ss_pred             CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcc
Q psy817          369 GANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSS  426 (854)
Q Consensus       369 g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~  426 (854)
                      |++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|+.++...
T Consensus       167 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~  224 (237)
T 3b7b_A          167 KCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVW  224 (237)
T ss_dssp             TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHH
T ss_pred             CCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999887653

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=100.00  E-value=1.6e-35  Score=312.44  Aligned_cols=239  Identities=18%  Similarity=0.175  Sum_probs=176.0

Q ss_pred             CCHHHHHHHHHcCCCC-CCCCccHHHHHHHcCCHHHHHHHHhCCCCccccCCCccHHHHHHhCCCHHHHHHHHhCCCCCC
Q psy817          132 KREDLLDALHQLGADL-SNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIH  210 (854)
Q Consensus       132 g~~~iv~~Ll~~g~~~-~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~  210 (854)
                      +..++.++|.+.+.+. |.+|.||||+|+..|+.+++++|+++|++++.. +|.||||+|+..|                
T Consensus        11 ~~~~v~~lL~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-~g~t~L~~A~~~g----------------   73 (285)
T 3kea_A           11 KSKQLKSFLSSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL-ENEFPLHQAATLE----------------   73 (285)
T ss_dssp             CHHHHHHHHHSTTTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC-TTCCHHHHHTTSS----------------
T ss_pred             CHHHHHHHHHhCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC-CCCCHHHHHHHcC----------------
Confidence            3445555555554433 337777777777777777777777777777644 3556665555555                


Q ss_pred             chHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCC
Q psy817          211 ETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGY  290 (854)
Q Consensus       211 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~  290 (854)
                                 +.+++++|+++|++++..|..|.||||+|+..|+.+++++|++++ ++++.++..++.||||+|+..|+
T Consensus        74 -----------~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~g~~t~L~~A~~~~~  141 (285)
T 3kea_A           74 -----------DTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKN-WRLMFYGKTGWKTSFYHAVMLND  141 (285)
T ss_dssp             -----------SCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHC-GGGGGCSSSGGGSHHHHHHHTTC
T ss_pred             -----------CHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcC-CCCCccCCCCCCCHHHHHHHcCC
Confidence                       555555566666677778888888888888888888888888875 77777665443688888888888


Q ss_pred             HHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcH-HHHHHhcCCCChHHHHHHHhCC
Q psy817          291 VECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTP-LHASLSKNILSVHPLEILLKWG  369 (854)
Q Consensus       291 ~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~-L~~a~~~~~~~~~~v~~Ll~~g  369 (854)
                      .+++++|+++|++.... ..|.||||+|+..|+.+++++|+++|++++..|..|.|| ||.|+..+  +.+++++|+++|
T Consensus       142 ~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~--~~~~v~~Ll~~g  218 (285)
T 3kea_A          142 VSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNK--DIEMLQALFKYD  218 (285)
T ss_dssp             HHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHT--CHHHHHHHTTSC
T ss_pred             HHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcC--CHHHHHHHHHcC
Confidence            88888888888765322 277888888888888888888888888888888888886 88888888  677788888888


Q ss_pred             CCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccC
Q psy817          370 ANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKT  409 (854)
Q Consensus       370 ~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~  409 (854)
                      ++++..|.       .|+..|+.+++++|+++|+++....
T Consensus       219 ad~~~~~~-------~a~~~~~~~iv~~Ll~~g~~~~~~~  251 (285)
T 3kea_A          219 INIYSANL-------ENVLLDDAEIAKMIIEKHVEYKSDS  251 (285)
T ss_dssp             BCSTTTTG-------GGGTTTCHHHHHHHHHHHHHHTTCT
T ss_pred             CCCCCCCh-------hhhhcCCHHHHHHHHHcCCCCCCcc
Confidence            88887773       4567888999999999988876544

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=100.00  E-value=1.1e-35  Score=313.77  Aligned_cols=224  Identities=17%  Similarity=0.182  Sum_probs=174.0

Q ss_pred             hcccccCCcHHHHHHHcCCHHHHHHHHHcCCCCCC-CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHh
Q psy817          115 KASQAEKTTALLWCVFVKREDLLDALHQLGADLSN-DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVL  192 (854)
Q Consensus       115 ~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~-~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~  192 (854)
                      +..|..|.||||+|+..|+.+++++|+++|++++. +|.||||+|+..|+.+++++|+++|++++..+ .|.||||+|+.
T Consensus        25 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~  104 (285)
T 3kea_A           25 FKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVD  104 (285)
T ss_dssp             TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCTTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHH
Confidence            56778899999999999999999999999999986 89999999999999999999999999998765 47888888877


Q ss_pred             CCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC-CcHHHHHHHcCCHHHHHHHHHcCCCCcc
Q psy817          193 GNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKG-VSPLHIAADRGLISCLKAILDSGMADVD  271 (854)
Q Consensus       193 ~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g-~t~L~~A~~~g~~~iv~~Ll~~~~~~~~  271 (854)
                      .|+.+++++|+++                           |++++..|..| .||||+|+..|+.+++++|++++ ++..
T Consensus       105 ~g~~~~v~~Ll~~---------------------------ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g-~~~~  156 (285)
T 3kea_A          105 SGNMQTVKLFVKK---------------------------NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEI-PSTF  156 (285)
T ss_dssp             TTCHHHHHHHHHH---------------------------CGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTS-CTTC
T ss_pred             cCCHHHHHHHHhc---------------------------CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCC-Cccc
Confidence            7766666666655                           44556667777 67777777777777777777776 3331


Q ss_pred             ccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCH-HHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHH
Q psy817          272 IKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIP-LHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHA  350 (854)
Q Consensus       272 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~  350 (854)
                        +...|.||||+|+..|+.+++++|+++|++++.+|..|.|| ||+|+..|+.+++++|+++|++++..|.       .
T Consensus       157 --~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~  227 (285)
T 3kea_A          157 --DLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------E  227 (285)
T ss_dssp             --CCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------G
T ss_pred             --cccCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------h
Confidence              12256677777777777777787777777777777777776 7777777778888888877777776662       3


Q ss_pred             HHhcCCCChHHHHHHHhCCCCCccCCC
Q psy817          351 SLSKNILSVHPLEILLKWGANVNARDI  377 (854)
Q Consensus       351 a~~~~~~~~~~v~~Ll~~g~d~n~~d~  377 (854)
                      |+..+  +.+++++|+++|++++..+.
T Consensus       228 a~~~~--~~~iv~~Ll~~g~~~~~~~~  252 (285)
T 3kea_A          228 NVLLD--DAEIAKMIIEKHVEYKSDSY  252 (285)
T ss_dssp             GGTTT--CHHHHHHHHHHHHHHTTCTT
T ss_pred             hhhcC--CHHHHHHHHHcCCCCCCccc
Confidence            44455  67777888877777665443

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=100.00  E-value=3.6e-35  Score=312.74  Aligned_cols=251  Identities=26%  Similarity=0.320  Sum_probs=187.5

Q ss_pred             HHHHcCCHHHHHHHHHcCCCCCC------------CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHhC
Q psy817          127 WCVFVKREDLLDALHQLGADLSN------------DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLG  193 (854)
Q Consensus       127 ~Aa~~g~~~iv~~Ll~~g~~~~~------------~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~  193 (854)
                      .+|..|+.+.++.++..+.+++.            +|.||||.||..|+.++|++|+++|+++|..+ +|.||||+|+..
T Consensus         4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~   83 (299)
T 1s70_B            4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACID   83 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence            46677777777777766554321            67789999999999999999999999998765 588999999999


Q ss_pred             CCHHHHHHHHhCCCCC------CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q psy817          194 NYVDCAKFLIKNKAHI------HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGM  267 (854)
Q Consensus       194 ~~~~iv~~Ll~~~~~~------~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~  267 (854)
                      |+.+++++|+++|+++      |.||||.|+..|+.+++++|+++|++++..|..|.||||+|+..|+.++++.++...+
T Consensus        84 g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~  163 (299)
T 1s70_B           84 DNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQG  163 (299)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcC
Confidence            9999999888888776      6788888888888888888888888888888889999999988888888888887765


Q ss_pred             CCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCC-CcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCc
Q psy817          268 ADVDIKTKERRVTALHLAAENGYVECLRILLENHA-NCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRT  346 (854)
Q Consensus       268 ~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t  346 (854)
                      .+++....... ++++        ..++.++..+. .....+..|.||||+|+..|+.+++++|+++|++++..|..|.|
T Consensus       164 ~~~~~~~~~~~-~~~~--------~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~t  234 (299)
T 1s70_B          164 VDIEAARKEEE-RIML--------RDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWT  234 (299)
T ss_dssp             CCHHHHHHHHH-HHHH--------HHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCC
T ss_pred             CCchhhhhhhh-hHHH--------HHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCc
Confidence            65554332211 2222        22333444433 33445667777777777777777777777777777777777777


Q ss_pred             HHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHH
Q psy817          347 PLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAAL  388 (854)
Q Consensus       347 ~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~  388 (854)
                      |||+|+..|  +.+++++|+++|++++.+|..|.||||+|+.
T Consensus       235 pL~~A~~~~--~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~  274 (299)
T 1s70_B          235 PLHAAAHWG--KEEACRILVENLCDMEAVNKVGQTAFDVADE  274 (299)
T ss_dssp             HHHHHHHTT--CHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS
T ss_pred             HHHHHHhcC--CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence            777777776  6666777777777777777777777777754

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.4e-35  Score=309.05  Aligned_cols=233  Identities=21%  Similarity=0.277  Sum_probs=137.9

Q ss_pred             CCccHHHHHHHcCCHHHHHHHHhCCCCccccCCCccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCH-HHHHH
Q psy817          150 DKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAV-DCVQL  228 (854)
Q Consensus       150 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~-~~v~~  228 (854)
                      .+.+||+.||.+|+.++|++|+++|++.......                  .+......+.|||+.|+..++. .+++.
T Consensus        10 ~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~------------------~~~~~~~~~~t~L~~a~~~~~~~~~v~~   71 (269)
T 4b93_B           10 REVEKLLRAVADGDLEMVRYLLEWTEEDLEDAED------------------TVSAADPEFCHPLCQCPKCAPAQKRLAK   71 (269)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHTCC-------------------------------------------------------
T ss_pred             cchhHHHHHHHcCCHHHHHHHHHCCCcccccccc------------------cccccCccCCCHHHHHHHhCCHHHHHHH
Confidence            4566777777777777777777776653211000                  0000111144556655555443 36677


Q ss_pred             HHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCC
Q psy817          229 LLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERN  308 (854)
Q Consensus       229 Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~  308 (854)
                      |++.|+++|..|.+|.||||+|+..|+.+++++|++.+ ++++..+ ..|.||++.|+..++.+++++|+++|++++.+|
T Consensus        72 Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~-a~~~~~~-~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d  149 (269)
T 4b93_B           72 VPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHG-ANAGARN-ADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKD  149 (269)
T ss_dssp             ---CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTT-CCTTCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC
T ss_pred             HHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcC-CCcCccC-CCCCCccccccccChHHHHHHHHHCCCCCCCCC
Confidence            77777777777777777777777777777777777765 6666654 345577777777777777777777777777777


Q ss_pred             CCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHH
Q psy817          309 HKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAAL  388 (854)
Q Consensus       309 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~  388 (854)
                      ..|.||||+|+..|+.+++++|+++|+++|..+..|.||||+|+..|  +.+++++|+++|+|+|.+|..|.||||+|++
T Consensus       150 ~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g--~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~  227 (269)
T 4b93_B          150 LSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEK--HVFVVELLLLHGASVQVLNKRQRTAVDCAEQ  227 (269)
T ss_dssp             TTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTT--CHHHHHHHHHTTCCSCCCCTTSCCSGGGSCT
T ss_pred             CCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcC--CHHHHHHHHHCCCCCCCcCCCCCCHHHHHHh
Confidence            77777777777777777777777777777777777777777777777  6677777777777777777777777777776


Q ss_pred             cCC-HHHHHHHHHcCCC
Q psy817          389 SEL-SQCVDCLIMHGAD  404 (854)
Q Consensus       389 ~~~-~~~v~~Ll~~ga~  404 (854)
                      +++ .++++.+...+++
T Consensus       228 ~~~i~~lL~~l~~~~~~  244 (269)
T 4b93_B          228 NSKIMELLQVVPSCVAS  244 (269)
T ss_dssp             TCHHHHHTTC-------
T ss_pred             CCcHHHHHHHHHHhchh
Confidence            654 2344444444433

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=100.00  E-value=4.6e-34  Score=293.38  Aligned_cols=219  Identities=23%  Similarity=0.252  Sum_probs=149.3

Q ss_pred             ccccCCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCccHHHHHHHcCCHHHHHHHHhCCCCccccC--CCccHHHHHH
Q psy817          117 SQAEKTTALLWCVFVKREDLLDALHQLGADLSN---DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK--DSYTPLHFAV  191 (854)
Q Consensus       117 ~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~---~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~--~g~t~L~~A~  191 (854)
                      .|..+.|+|++|+..|+.+++++|++.|++++.   .|.||||+|+..|+.+++++|+++|++++...  .|.||||+|+
T Consensus         5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~   84 (240)
T 3eu9_A            5 IDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWAT   84 (240)
T ss_dssp             CSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHH
T ss_pred             cccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHH
Confidence            456677888888888888888888888887754   77888888888888888888888888776433  2677777777


Q ss_pred             hCCCHHHHHHHHhCCCCC------CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC-HHHHHHHHH
Q psy817          192 LGNYVDCAKFLIKNKAHI------HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGL-ISCLKAILD  264 (854)
Q Consensus       192 ~~~~~~iv~~Ll~~~~~~------~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~-~~iv~~Ll~  264 (854)
                      ..|+.+++++|+++|+++      |.||||.|+..|+.+++++|+++|++++..+..|.||||.|+..++ .+++++|++
T Consensus        85 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~  164 (240)
T 3eu9_A           85 RQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLT  164 (240)
T ss_dssp             HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHH
T ss_pred             HcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHh
Confidence            777777777777766554      4566666666666666666666666666666666666666664444 566666666


Q ss_pred             cCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCC
Q psy817          265 SGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQ  336 (854)
Q Consensus       265 ~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~  336 (854)
                      .+ ++++..+...|.||||+|+..|+.+++++|+++|++++.++..|.|||++|+..|+.+++++|++++++
T Consensus       165 ~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~  235 (240)
T 3eu9_A          165 FN-VSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQA  235 (240)
T ss_dssp             TT-CCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC--
T ss_pred             cC-CCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhc
Confidence            54 556555544555666666666666666666666666666666666666666666666666666666554

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=100.00  E-value=3.8e-34  Score=292.41  Aligned_cols=222  Identities=23%  Similarity=0.304  Sum_probs=205.2

Q ss_pred             CchHHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHc
Q psy817          210 HETIVHSAVSTNAVDCVQLLLSLQI-NPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAEN  288 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~  288 (854)
                      +.+|||.|+..|+.+.+++|++.+. ..+..|..|.||||+|+..|+.+++++|++++ ++++.++ ..|.||||+|+..
T Consensus         6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~-~~g~t~L~~A~~~   83 (231)
T 3aji_A            6 SNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLG-VPVNDKD-DAGWSPLHIAASA   83 (231)
T ss_dssp             SSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCC-TTSCCHHHHHHHH
T ss_pred             ccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhC-CCCCCcC-CCCCCHHHHHHHc
Confidence            5678888888888888888887653 46778999999999999999999999999986 8888765 4567999999999


Q ss_pred             CCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhC
Q psy817          289 GYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKW  368 (854)
Q Consensus       289 g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~  368 (854)
                      |+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||.|+..+  +.+++++|+++
T Consensus        84 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~  161 (231)
T 3aji_A           84 GXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKG--NLKMVHILLFY  161 (231)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT--CHHHHHHHHHT
T ss_pred             CHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC--CHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999  88999999999


Q ss_pred             CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHHhhhhcC
Q psy817          369 GANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLD  435 (854)
Q Consensus       369 g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~  435 (854)
                      |++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|.+.+..++..++...+
T Consensus       162 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~  228 (231)
T 3aji_A          162 KASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEE  228 (231)
T ss_dssp             TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHH
T ss_pred             CCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccc
Confidence            9999999999999999999999999999999999999999999999999999888888877776544

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.2e-34  Score=302.21  Aligned_cols=230  Identities=23%  Similarity=0.324  Sum_probs=170.4

Q ss_pred             CccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCH-HHHHH
Q psy817          183 SYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLI-SCLKA  261 (854)
Q Consensus       183 g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~-~iv~~  261 (854)
                      +.+||+.|+..|+.++|++|++.|++...                   .....++..+..|.|||+.|+..++. .+++.
T Consensus        11 ~~~~L~~A~~~G~~~~v~~LL~~~~~~~~-------------------~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~   71 (269)
T 4b93_B           11 EVEKLLRAVADGDLEMVRYLLEWTEEDLE-------------------DAEDTVSAADPEFCHPLCQCPKCAPAQKRLAK   71 (269)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHTCC--------------------------------------------------------
T ss_pred             chhHHHHHHHcCCHHHHHHHHHCCCcccc-------------------cccccccccCccCCCHHHHHHHhCCHHHHHHH
Confidence            56677777777777777777776654311                   01123466788899999999988876 47888


Q ss_pred             HHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCcc
Q psy817          262 ILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASD  341 (854)
Q Consensus       262 Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~  341 (854)
                      |++.| +++|.++ ..|.||||+|+..|+.+++++|+++|++++..+..|.||++.|+..++.+++++|+++|+++|..|
T Consensus        72 Ll~~G-advn~~d-~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d  149 (269)
T 4b93_B           72 VPASG-LGVNVTS-QDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKD  149 (269)
T ss_dssp             ---CC-CCTTCCC-TTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC
T ss_pred             HHHCC-CCCCCcC-CCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCC
Confidence            99876 9999876 467799999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHh
Q psy817          342 CDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMR  421 (854)
Q Consensus       342 ~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~  421 (854)
                      ..|+||||+|+..|  +.+++++|+++|+|+|.+|..|.||||+|+..|+.++|++|+++|+|++.+|..|.|||++|++
T Consensus       150 ~~g~TpL~~A~~~g--~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~  227 (269)
T 4b93_B          150 LSGNTPLIYACSGG--HHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQ  227 (269)
T ss_dssp             TTCCCHHHHHHHTT--CGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCT
T ss_pred             CCCCCHHHHHHHCC--CHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHh
Confidence            99999999999999  7788999999999999999999999999999999999999999999999999999999999987


Q ss_pred             cCCcchHHhhhhcCCc
Q psy817          422 NTPSSISSVRKKLDSS  437 (854)
Q Consensus       422 ~~~~~~~~~~~~~~~~  437 (854)
                      ++  .+..+++.+...
T Consensus       228 ~~--~i~~lL~~l~~~  241 (269)
T 4b93_B          228 NS--KIMELLQVVPSC  241 (269)
T ss_dssp             TC--HHHHHTTC----
T ss_pred             CC--cHHHHHHHHHHh
Confidence            55  355555554443

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=100.00  E-value=5.5e-34  Score=290.48  Aligned_cols=211  Identities=23%  Similarity=0.278  Sum_probs=189.2

Q ss_pred             CchHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCccccccCCcCcHHHHHHH
Q psy817          210 HETIVHSAVSTNAVDCVQLLLSLQINPNV-LNNKGVSPLHIAADRGLISCLKAILDSG-MADVDIKTKERRVTALHLAAE  287 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~~g~~~iv~~Ll~~~-~~~~~~~~~~~~~t~L~~A~~  287 (854)
                      |+||||.|+..|+.+++++|++.|.+... .|..|.||||+|+..|+.+++++|++++ ..+++...+..|.||||+|+.
T Consensus         2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~   81 (228)
T 2dzn_A            2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS   81 (228)
T ss_dssp             -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred             CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence            57888888888888888888888777554 8899999999999999999999999986 234444234677899999999


Q ss_pred             cCCHHHHHHHHhcC--CCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHH
Q psy817          288 NGYVECLRILLENH--ANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEIL  365 (854)
Q Consensus       288 ~g~~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~L  365 (854)
                      .|+.+++++|+++|  ++++..+..|.||||+|+..|+.+++++|+++|++++..|..|.||||.|+..+  +.+++++|
T Consensus        82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~v~~L  159 (228)
T 2dzn_A           82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVG--SLKLIELL  159 (228)
T ss_dssp             HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTT--CHHHHHHH
T ss_pred             cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcC--CHHHHHHH
Confidence            99999999999998  888999999999999999999999999999999999999999999999999999  88899999


Q ss_pred             HhCC-CCCccCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCccccCCCCCCHHHHHHhc
Q psy817          366 LKWG-ANVNARDIFGYSPIHIAALSELSQCVDCLI-MHGADISSKTPSGSSALSIIMRN  422 (854)
Q Consensus       366 l~~g-~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~~~~g~t~l~~a~~~  422 (854)
                      +++| ++++.+|..|.||||+|+..|+.+++++|+ ++|++++.+|..|.||+++|.+.
T Consensus       160 l~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~  218 (228)
T 2dzn_A          160 CGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE  218 (228)
T ss_dssp             HTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST
T ss_pred             HhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH
Confidence            9999 999999999999999999999999999999 89999999999999999999654

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=100.00  E-value=5.5e-34  Score=289.44  Aligned_cols=216  Identities=24%  Similarity=0.273  Sum_probs=186.7

Q ss_pred             cCCHHHHHHHHhCCCCcccc--CCCccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCC
Q psy817          161 NGSIKGCSWLMLHGHDINFT--KDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNV  238 (854)
Q Consensus       161 ~g~~~iv~~Ll~~g~~~~~~--~~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~  238 (854)
                      .|+.+++++|+++|++++..  .+|.||||+|+..|                           +.+++++|+++|++++.
T Consensus         1 gg~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g---------------------------~~~~v~~Ll~~g~~~~~   53 (223)
T 2f8y_A            1 GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYS---------------------------RSDAAKRLLEASADANI   53 (223)
T ss_dssp             ----CCEETTEETTCCTTCCCTTTCCCHHHHHHHTT---------------------------CHHHHHHHHHTTCCTTC
T ss_pred             CCcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcC---------------------------CHHHHHHHHHcCCCCCC
Confidence            36777888888888877643  24666666666555                           45555555666777888


Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHH
Q psy817          239 LNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLA  318 (854)
Q Consensus       239 ~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A  318 (854)
                      .|..|.||||+|+..|+.+++++|++++..+++..+ ..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|
T Consensus        54 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A  132 (223)
T 2f8y_A           54 QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARM-HDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWA  132 (223)
T ss_dssp             CCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHH
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHH
Confidence            999999999999999999999999999866777665 4567999999999999999999999999999999999999999


Q ss_pred             HhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHH
Q psy817          319 AKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCL  398 (854)
Q Consensus       319 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~L  398 (854)
                      +..|+.+++++|+++|++++..|..|.||||.|+..+  +.+++++|+++|++++.+|..|.||+++|+..++.+++++|
T Consensus       133 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L  210 (223)
T 2f8y_A          133 AAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREG--SYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL  210 (223)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT--CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred             HHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcC--CHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHH
Confidence            9999999999999999999999999999999999999  88999999999999999999999999999999999999999


Q ss_pred             HHcCCCcc
Q psy817          399 IMHGADIS  406 (854)
Q Consensus       399 l~~ga~~~  406 (854)
                      +++|+...
T Consensus       211 ~~~g~~~~  218 (223)
T 2f8y_A          211 DEYNLVRS  218 (223)
T ss_dssp             HHTTCSSC
T ss_pred             HHcCCCcc
Confidence            99998754

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=100.00  E-value=4.9e-36  Score=322.89  Aligned_cols=266  Identities=14%  Similarity=0.092  Sum_probs=204.9

Q ss_pred             cCCHHHHHHHHHcCCCCCC---CCccHHHHHHHcCCHHHHHHHHhCCCCccccCCCccHHHHHHhCCCHHHHHHHHhCCC
Q psy817          131 VKREDLLDALHQLGADLSN---DKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKA  207 (854)
Q Consensus       131 ~g~~~iv~~Ll~~g~~~~~---~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~~~  207 (854)
                      ....++|++|+++|++++.   .|.|+++     |+.++|+.|+++|++++     .++++.|+......-    -..+.
T Consensus        29 ~~~~dlv~~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~-----~~~~~~a~~~~~~~~----~~~~~   94 (327)
T 1sw6_A           29 TFTHDLTSDFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPE-----IQEMPTSLNNDSSNR----NSEGG   94 (327)
T ss_dssp             ECCTTCCCSTTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------
T ss_pred             hhcCchHHHHhhCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCc-----cccchHhhhcccccc----ccccc
Confidence            4666889999999998854   7888877     89999999999998854     356777765421000    00011


Q ss_pred             CCCchHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHH
Q psy817          208 HIHETIVHSAVSTNAVDCVQLLLSLQINPNV-LNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAA  286 (854)
Q Consensus       208 ~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~  286 (854)
                      ....+..|.|+..+..++++.|++.|+++|. .|..|.||||+|+..|+.+++++|+++| ++++.++ ..|.||||+|+
T Consensus        95 ~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~G-ad~n~~d-~~g~TpLh~A~  172 (327)
T 1sw6_A           95 SSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHG-SNRLYGD-NMGESCLVKAV  172 (327)
T ss_dssp             ---------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTBCC-TTCCCHHHHHH
T ss_pred             CCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcC-CCCCCHHHHHH
Confidence            1123456888888999999999999999999 8999999999999999999999999997 9999776 46779999999


Q ss_pred             HcCC---HHHHHHHHhcC-CCcCCCCCCCCCHHHHHHh----cCCHHHHHHHHhC--------------------CCCCC
Q psy817          287 ENGY---VECLRILLENH-ANCNERNHKEQIPLHLAAK----CQSVECMEMLLRK--------------------GSQVN  338 (854)
Q Consensus       287 ~~g~---~~~v~~Ll~~~-~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~--------------------g~~~~  338 (854)
                      ..|+   .++++.|++.+ ++++.+|..|.||||+|+.    .|+.+++++|++.                    |++++
T Consensus       173 ~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~  252 (327)
T 1sw6_A          173 KSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPN  252 (327)
T ss_dssp             HSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC---------
T ss_pred             HhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcc
Confidence            9998   78889999887 7799999999999999999    8999999999987                    89999


Q ss_pred             CccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHH
Q psy817          339 ASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSI  418 (854)
Q Consensus       339 ~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~  418 (854)
                      ..+..|.||||.|+.        +++|+++  ++|.+|..|+||||+|+..|+.+++++|+++|+|++.+|..|.|||++
T Consensus       253 ~~~~~g~t~L~~a~~--------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~  322 (327)
T 1sw6_A          253 DKNGERKDSILENLD--------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDF  322 (327)
T ss_dssp             -------CHHHHHCS--------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGG
T ss_pred             cccccCCChhHHHHH--------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence            999999999999984        8889988  689999999999999999999999999999999999999999999999


Q ss_pred             HHhc
Q psy817          419 IMRN  422 (854)
Q Consensus       419 a~~~  422 (854)
                      |+++
T Consensus       323 A~~~  326 (327)
T 1sw6_A          323 GAGL  326 (327)
T ss_dssp             TCC-
T ss_pred             HHhc
Confidence            9765

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=100.00  E-value=3.7e-33  Score=286.58  Aligned_cols=224  Identities=22%  Similarity=0.253  Sum_probs=149.8

Q ss_pred             CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcC
Q psy817          210 HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENG  289 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g  289 (854)
                      |.++|+.|+..|+.+++++|++.|++++..+..|.||||.|+..|+.+++++|++++ ++++......|.||||+|+..|
T Consensus         9 ~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~~~t~L~~A~~~~   87 (240)
T 3eu9_A            9 STWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKG-AIVDQLGGDLNSTPLHWATRQG   87 (240)
T ss_dssp             GGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCBTTTTBCHHHHHHHHT
T ss_pred             cchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcC-CcchhhcCCcCCChhHHHHHcC
Confidence            455566666666666666666666666666666777777777777777777777665 5555444444567777777777


Q ss_pred             CHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCC
Q psy817          290 YVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWG  369 (854)
Q Consensus       290 ~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g  369 (854)
                      +.+++++|+++|++++..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||.|+..+. ..+++++|++.|
T Consensus        88 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~-~~~~~~~L~~~~  166 (240)
T 3eu9_A           88 HLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTH-SVDPTRLLLTFN  166 (240)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCC-SSTTHHHHHHTT
T ss_pred             CHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCC-hHHHHHHHHhcC
Confidence            7777777777777766666677777777777777777777777777776666677777777765553 245566677777


Q ss_pred             CCCccCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHHhhhhcC
Q psy817          370 ANVNARDI-FGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLD  435 (854)
Q Consensus       370 ~d~n~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~  435 (854)
                      ++++..+. .|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|++.+..+++..+....
T Consensus       167 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~  233 (240)
T 3eu9_A          167 VSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEAR  233 (240)
T ss_dssp             CCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC
T ss_pred             CCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhh
Confidence            77766665 6667777777777777777777777777777777777777777766666666554443

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=100.00  E-value=1.6e-33  Score=287.00  Aligned_cols=215  Identities=20%  Similarity=0.236  Sum_probs=150.1

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCC----CCCCccHHHHHHHcCCHHHHHHHHhCCCCc--cc-cC-CCccHHHHHHh
Q psy817          121 KTTALLWCVFVKREDLLDALHQLGADL----SNDKYGALHLAAFNGSIKGCSWLMLHGHDI--NF-TK-DSYTPLHFAVL  192 (854)
Q Consensus       121 ~~t~L~~Aa~~g~~~iv~~Ll~~g~~~----~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~--~~-~~-~g~t~L~~A~~  192 (854)
                      |+||||+|+..|+.+++++|++.|++.    +..|.||||+|+..|+.+++++|+++|+++  +. .+ .|.||||+|+.
T Consensus         2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~   81 (228)
T 2dzn_A            2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS   81 (228)
T ss_dssp             -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred             CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence            578888888888888888888877654    337788888888888888888888888443  32 22 36666666666


Q ss_pred             CCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccc
Q psy817          193 GNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDI  272 (854)
Q Consensus       193 ~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~  272 (854)
                      .|+.+++++|+++|.                         +++++..|..|.||||.|+..|+.+++++|++++ ++++.
T Consensus        82 ~~~~~~~~~Ll~~g~-------------------------~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~  135 (228)
T 2dzn_A           82 VGNLEVVKSLYDRPL-------------------------KPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENG-ASVRI  135 (228)
T ss_dssp             HCCHHHHHHHHSSSS-------------------------CCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCSCC
T ss_pred             cCCHHHHHHHHhCCC-------------------------CcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcC-CCccc
Confidence            665555555555542                         1566666777777777777777777777777764 66666


Q ss_pred             cccCCcCcHHHHHHHcCCHHHHHHHHhcC-CCcCCCCCCCCCHHHHHHhcCCHHHHHHHH-hCCCCCCCccCCCCcHHHH
Q psy817          273 KTKERRVTALHLAAENGYVECLRILLENH-ANCNERNHKEQIPLHLAAKCQSVECMEMLL-RKGSQVNASDCDNRTPLHA  350 (854)
Q Consensus       273 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~  350 (854)
                      ++. .|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+ ++|++++..|..|.||+|.
T Consensus       136 ~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~  214 (228)
T 2dzn_A          136 KDK-FNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDV  214 (228)
T ss_dssp             CCT-TSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGG
T ss_pred             cCC-CCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHH
Confidence            543 4557777777777777777777777 777777777777777777777777777777 6777777777777777777


Q ss_pred             HHhcCCCChHHHHHHHh
Q psy817          351 SLSKNILSVHPLEILLK  367 (854)
Q Consensus       351 a~~~~~~~~~~v~~Ll~  367 (854)
                      |+..     ++.++|++
T Consensus       215 A~~~-----~~~~~l~~  226 (228)
T 2dzn_A          215 ALNE-----QVKKFFLN  226 (228)
T ss_dssp             CSST-----THHHHHHT
T ss_pred             HHHH-----HHHHHHHh
Confidence            7543     23555554

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=100.00  E-value=3.4e-34  Score=305.18  Aligned_cols=262  Identities=20%  Similarity=0.210  Sum_probs=195.5

Q ss_pred             HHHHcCCHHHHHHHHhCCCCcccc----------CCCccHHHHHHhCCCHHHHHHHHhCCCCC------CchHHHHHHHc
Q psy817          157 LAAFNGSIKGCSWLMLHGHDINFT----------KDSYTPLHFAVLGNYVDCAKFLIKNKAHI------HETIVHSAVST  220 (854)
Q Consensus       157 ~A~~~g~~~iv~~Ll~~g~~~~~~----------~~g~t~L~~A~~~~~~~iv~~Ll~~~~~~------~~t~L~~A~~~  220 (854)
                      .++..|+.+.++.++..+.++...          .+|.|||+.|+..|+.+++++|+++|+++      |.||||.|+..
T Consensus         4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~   83 (299)
T 1s70_B            4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACID   83 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence            567778888888888776554321          13567888888888888888887777665      56777777777


Q ss_pred             CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhc
Q psy817          221 NAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLEN  300 (854)
Q Consensus       221 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~  300 (854)
                      |+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++++ ++++..+ ..|.||||+|+..|+.++++.++..
T Consensus        84 g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g-~~~~~~~-~~g~t~l~~A~~~~~~~~~~~ll~~  161 (299)
T 1s70_B           84 DNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQG-AHVGAVN-SEGDTPLDIAEEEAMEELLQNEVNR  161 (299)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCC-TTSCCHHHHCCSHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCCCCcC-CCCCCHHHHHHhcchHHHHHHHHhh
Confidence            7777777777777777777777777777777777777777777765 6666654 3455777777777777777766643


Q ss_pred             -CCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhC-CCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCC
Q psy817          301 -HANCNERNHKEQIPLHLAAKCQSVECMEMLLRK-GSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIF  378 (854)
Q Consensus       301 -~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~  378 (854)
                       +.+++..+..+.++++        ..+..++.. +......+..|.||||.|+..|  +.+++++|+++|+++|.+|..
T Consensus       162 ~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g--~~~~v~~Ll~~g~d~~~~d~~  231 (299)
T 1s70_B          162 QGVDIEAARKEEERIML--------RDARQWLNSGHINDVRHAKSGGTALHVAAAKG--YTEVLKLLIQARYDVNIKDYD  231 (299)
T ss_dssp             HTCCHHHHHHHHHHHHH--------HHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHT--CHHHHHHHHTTTCCTTCCCTT
T ss_pred             cCCCchhhhhhhhhHHH--------HHHHHHHhccCcchhhhcCCCCCHHHHHHHCC--cHHHHHHHHHcCCCCCCcCCC
Confidence             4444433332222222        223333433 3344456788999999999999  889999999999999999999


Q ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHHh
Q psy817          379 GYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSV  430 (854)
Q Consensus       379 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~  430 (854)
                      |.||||+|+..|+.+++++|+++|++++.+|..|.||+++|.+.....+..+
T Consensus       232 g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~l~~l  283 (299)
T 1s70_B          232 GWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEEL  283 (299)
T ss_dssp             CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSGGGHHHHHH
T ss_pred             CCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999976444433333

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=100.00  E-value=1.7e-32  Score=278.44  Aligned_cols=214  Identities=23%  Similarity=0.263  Sum_probs=198.8

Q ss_pred             cCCHHHHHHHHHCCCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHH
Q psy817          220 TNAVDCVQLLLSLQINPNVL-NNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILL  298 (854)
Q Consensus       220 ~~~~~~v~~Ll~~g~~~~~~-d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll  298 (854)
                      +|+.+++++|+++|++++.. |..|.||||+|+..|+.+++++|++++ ++++..+ ..|.||||+|+..|+.+++++|+
T Consensus         1 gg~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll   78 (223)
T 2f8y_A            1 GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEAS-ADANIQD-NMGRTPLHAAVSADAQGVFQILI   78 (223)
T ss_dssp             ----CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCC-TTSCCHHHHHHHTTCHHHHHHHH
T ss_pred             CCcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcC-CCCCCcC-CCCCCHHHHHHHcCCHHHHHHHH
Confidence            36788899999999998876 899999999999999999999999986 8888765 45679999999999999999999


Q ss_pred             hcCC-CcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCC
Q psy817          299 ENHA-NCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDI  377 (854)
Q Consensus       299 ~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~  377 (854)
                      ++++ +++..+..|.||||+|+..|+.+++++|+++|++++..|..|.||||.|+..+  +.+++++|+++|++++.+|.
T Consensus        79 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~g~~~~~~~~  156 (223)
T 2f8y_A           79 RNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVN--NVDAAVVLLKNGANKDMQNN  156 (223)
T ss_dssp             HBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTT--CHHHHHHHHHTTCCTTCCCT
T ss_pred             HcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCCCcCC
Confidence            9987 88999999999999999999999999999999999999999999999999999  88999999999999999999


Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHHhhhhcCCc
Q psy817          378 FGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSS  437 (854)
Q Consensus       378 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~  437 (854)
                      .|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|++.++.++..++......
T Consensus       157 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~  216 (223)
T 2f8y_A          157 REETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV  216 (223)
T ss_dssp             TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred             CCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence            999999999999999999999999999999999999999999999999999888776654

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=100.00  E-value=1.8e-34  Score=310.65  Aligned_cols=229  Identities=18%  Similarity=0.136  Sum_probs=159.0

Q ss_pred             cccccCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCccHH-----------------------HHHHHcCCHHHHHHHHh
Q psy817          116 ASQAEKTTALLWCVFVKREDLLDALHQLGADLSNDKYGAL-----------------------HLAAFNGSIKGCSWLML  172 (854)
Q Consensus       116 ~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~g~t~L-----------------------~~A~~~g~~~iv~~Ll~  172 (854)
                      ..+..|.|+++     |+.++|+.|+++|++++.   +++                       |.|+..+..+++++|++
T Consensus        47 ~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~  118 (327)
T 1sw6_A           47 KALPSPVVNDN-----EQKMKLEAFLQRLLFPEI---QEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPN  118 (327)
T ss_dssp             ECBCCCCCCCH-----HHHHHHHHHHHHHHC----------------------------------CHHHHHHHHHHHCTT
T ss_pred             cCCCCCCcccC-----chhHHHHHHHHhccCCcc---ccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHh
Confidence            45667888877     999999999999988653   244                       44444445555555555


Q ss_pred             CCCCccc-cC-CCccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q psy817          173 HGHDINF-TK-DSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIA  250 (854)
Q Consensus       173 ~g~~~~~-~~-~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A  250 (854)
                      +|+++|. .+ +|.||||                           +|+..|+.++|++|+++|++++.+|..|.||||+|
T Consensus       119 ~g~dvn~~~d~~g~TpLh---------------------------~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A  171 (327)
T 1sw6_A          119 TQLNLNIPVDEHGNTPLH---------------------------WLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKA  171 (327)
T ss_dssp             SCCCSCSCCSTTCCCHHH---------------------------HHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHH
T ss_pred             cCCCcccccCCCCCcHHH---------------------------HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence            5555554 22 3455555                           55555555666666666777777788888888888


Q ss_pred             HHcCC---HHHHHHHHHcCCCCccccccCCcCcHHHHHHH----cCCHHHHHHHHhc--------------------CCC
Q psy817          251 ADRGL---ISCLKAILDSGMADVDIKTKERRVTALHLAAE----NGYVECLRILLEN--------------------HAN  303 (854)
Q Consensus       251 ~~~g~---~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~----~g~~~~v~~Ll~~--------------------~~~  303 (854)
                      +..|+   .++++.|++.+.++++.++ ..|.||||+|+.    .|+.+++++|++.                    |++
T Consensus       172 ~~~g~~~~~~~~~~ll~~~~~~~~~~d-~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~  250 (327)
T 1sw6_A          172 VKSVNNYDSGTFEALLDYLYPCLILED-SMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESK  250 (327)
T ss_dssp             HHSSHHHHTTCHHHHHHHHGGGGGEEC-TTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-------
T ss_pred             HHhcccccHHHHHHHHHhhhccccCCC-CCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCC
Confidence            88777   6677777776656666654 455688888887    7788888888776                    889


Q ss_pred             cCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHH
Q psy817          304 CNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPI  383 (854)
Q Consensus       304 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L  383 (854)
                      ++.++..|.||||.|+.      +++|+++  ++|.+|..|+||||+|+..|  +.+++++|+++|+|++.+|..|.|||
T Consensus       251 ~~~~~~~g~t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g--~~~~v~~Ll~~Gad~~~~d~~G~TpL  320 (327)
T 1sw6_A          251 PNDKNGERKDSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLG--NISIVDALLDYGADPFIANKSGLRPV  320 (327)
T ss_dssp             ---------CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHC--CHHHHHHHHHTTCCTTCCCTTSCCGG
T ss_pred             cccccccCCChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcC--CHHHHHHHHHcCCCCcccCCCCCCHH
Confidence            99999999999999986      8999988  68888999999999999999  78899999999999999999999999


Q ss_pred             HHHHHcC
Q psy817          384 HIAALSE  390 (854)
Q Consensus       384 ~~A~~~~  390 (854)
                      |+|+.+|
T Consensus       321 ~~A~~~g  327 (327)
T 1sw6_A          321 DFGAGLE  327 (327)
T ss_dssp             GGTCC--
T ss_pred             HHHHhcC
Confidence            9998764

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=99.97  E-value=8.8e-31  Score=267.56  Aligned_cols=199  Identities=22%  Similarity=0.273  Sum_probs=90.2

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHc-CCCCCC---CCccHHHHHHHcCCHHHHHHHHhCCCCcc-----ccC-CCccHHHHH
Q psy817          121 KTTALLWCVFVKREDLLDALHQL-GADLSN---DKYGALHLAAFNGSIKGCSWLMLHGHDIN-----FTK-DSYTPLHFA  190 (854)
Q Consensus       121 ~~t~L~~Aa~~g~~~iv~~Ll~~-g~~~~~---~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~-----~~~-~g~t~L~~A  190 (854)
                      |.||||+|+..|+.+++++|++. |++++.   +|+||||+|+..|+.+++++|+++|+++.     ..+ +|.||||+|
T Consensus         3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A   82 (232)
T 2rfa_A            3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIA   82 (232)
T ss_dssp             TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHH
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHH
Confidence            45555555555555555555554 544432   45555555555555555555555554431     111 244444444


Q ss_pred             HhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc
Q psy817          191 VLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADV  270 (854)
Q Consensus       191 ~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~  270 (854)
                      +..|+.+++++|+++|+++....      .+.        ......+..|..|.||||+|+..|+.+++++|+++| +++
T Consensus        83 ~~~~~~~~v~~Ll~~g~~~~~~~------~~~--------~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~  147 (232)
T 2rfa_A           83 VINQNVNLVRALLARGASVSARA------TGS--------VFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHG-ADI  147 (232)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTCCC------CSG--------GGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTT-CCT
T ss_pred             HHcCCHHHHHHHHhCCCCCCccc------CCc--------ceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCC-CCC
Confidence            44444444444444433321000      000        000011222234555555555555555555555543 444


Q ss_pred             cccccCCcCcHHHHHHHcCCHHHH----HHHHhcCCCc------CCCCCCCCCHHHHHHhcCCHHHHHHHHhCCC
Q psy817          271 DIKTKERRVTALHLAAENGYVECL----RILLENHANC------NERNHKEQIPLHLAAKCQSVECMEMLLRKGS  335 (854)
Q Consensus       271 ~~~~~~~~~t~L~~A~~~g~~~~v----~~Ll~~~~~~------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~  335 (854)
                      +.++ ..|.||||+|+..|+.+++    ++|+++|++.      +.+|..|.||||+|+..|+.+++++|+++|.
T Consensus       148 ~~~d-~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~  221 (232)
T 2rfa_A          148 RAQD-SLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRK  221 (232)
T ss_dssp             TCCC-TTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred             CCCC-CCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCc
Confidence            4443 2334555555555555444    5555555544      2444555555555555555555555555444

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.97  E-value=7.4e-32  Score=276.34  Aligned_cols=214  Identities=19%  Similarity=0.186  Sum_probs=148.3

Q ss_pred             cccccCCcHHHHHHHcCCHHHHHHHHHcCC----CCCC---CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHH
Q psy817          116 ASQAEKTTALLWCVFVKREDLLDALHQLGA----DLSN---DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPL  187 (854)
Q Consensus       116 ~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~----~~~~---~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L  187 (854)
                      ..|.+|.||||+|+..|+.+++++|++.+.    ++|.   .|.||||+|+..|+.+++++|+++|++++..+ .|.|||
T Consensus         3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L   82 (236)
T 1ikn_D            3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPL   82 (236)
T ss_dssp             ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHH
T ss_pred             cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence            356677788888888888887777776654    3433   67778888888888888888887777777654 477777


Q ss_pred             HHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q psy817          188 HFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGM  267 (854)
Q Consensus       188 ~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~  267 (854)
                      |+|+..|+.+++++|+++|++...                     +..++..+..|.||||+|+..|+.+++++|++++ 
T Consensus        83 ~~A~~~~~~~~v~~Ll~~~~~~~~---------------------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-  140 (236)
T 1ikn_D           83 HLACEQGCLASVGVLTQSCTTPHL---------------------HSILKATNYNGHTCLHLASIHGYLGIVELLVSLG-  140 (236)
T ss_dssp             HHHHHHTCHHHHHHHHHSTTTTSS---------------------SCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHT-
T ss_pred             HHHHHcCCHHHHHHHHhcccchhH---------------------HHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC-
Confidence            777777777777777666654210                     1123556667777777777777777777777775 


Q ss_pred             CCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCC--CccCCCC
Q psy817          268 ADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVN--ASDCDNR  345 (854)
Q Consensus       268 ~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~  345 (854)
                      ++++.++...|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+.+++++|+++|++..  ..+..|.
T Consensus       141 ~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~  220 (236)
T 1ikn_D          141 ADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDE  220 (236)
T ss_dssp             CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTT
T ss_pred             CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchH
Confidence            77776665456678888877777788888887777777777777888888877778888888877777554  4556666


Q ss_pred             cHHHHH
Q psy817          346 TPLHAS  351 (854)
Q Consensus       346 t~L~~a  351 (854)
                      |+.+.+
T Consensus       221 ~~~~~~  226 (236)
T 1ikn_D          221 ESYDTE  226 (236)
T ss_dssp             TCCCCC
T ss_pred             HHHhhh
Confidence            665443

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.97  E-value=3.8e-30  Score=256.46  Aligned_cols=191  Identities=19%  Similarity=0.249  Sum_probs=167.6

Q ss_pred             CchHHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHc
Q psy817          210 HETIVHSAVSTNAVDCVQLLLSLQI-NPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAEN  288 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~  288 (854)
                      +.||||.|+..|+.+.++.|++.+. +++..|..|.||||+|+..|+.+++++|++++ ++++..+ ..|.||||+|+..
T Consensus         5 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~-~~g~t~l~~A~~~   82 (201)
T 3hra_A            5 EVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRG-ADINLQN-SISDSPYLYAGAQ   82 (201)
T ss_dssp             CTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCC-TTSCCHHHHHHHT
T ss_pred             cccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCC-CCCCCHHHHHHHc
Confidence            5677888888888888888887755 88889999999999999999999999999986 8888765 4566999999999


Q ss_pred             CCHHHHHHHH-hcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCC-CCCCCccCCCCcHHHHHHhcCCCC---hHHHH
Q psy817          289 GYVECLRILL-ENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKG-SQVNASDCDNRTPLHASLSKNILS---VHPLE  363 (854)
Q Consensus       289 g~~~~v~~Ll-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~a~~~~~~~---~~~v~  363 (854)
                      |+.+++++|+ ..+++++..+..|.||||.|+..|+.+++++|+++| ++++..|..|.||||.|+..+...   .++++
T Consensus        83 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~  162 (201)
T 3hra_A           83 GRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVK  162 (201)
T ss_dssp             TCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHH
T ss_pred             CCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHH
Confidence            9999999999 556688899999999999999999999999999998 899999999999999999887311   78899


Q ss_pred             HHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q psy817          364 ILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHG  402 (854)
Q Consensus       364 ~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g  402 (854)
                      +|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus       163 ~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G  201 (201)
T 3hra_A          163 LLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN  201 (201)
T ss_dssp             HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred             HHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence            999999999999999999999999999999999999887

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.97  E-value=7.6e-32  Score=276.22  Aligned_cols=211  Identities=25%  Similarity=0.286  Sum_probs=167.0

Q ss_pred             CCccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHH
Q psy817          182 DSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKA  261 (854)
Q Consensus       182 ~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~  261 (854)
                      +|.||||+|+..|+.+++++|++.+..                       .|++++..|..|.||||+|+..|+.+++++
T Consensus         7 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~-----------------------~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~   63 (236)
T 1ikn_D            7 DGDSFLHLAIIHEEKALTMEVIRQVKG-----------------------DLAFLNFQNNLQQTPLHLAVITNQPEIAEA   63 (236)
T ss_dssp             CCCCTTHHHHHTTCSSSSSCCCC----------------------------CCCCCCCCTTCCCHHHHHHHTTCHHHHHC
T ss_pred             CCCchhHHHHHcCChhHHHHHHHHhhc-----------------------cHHHhhccCCCCCCHHHHHHHcCCHHHHHH
Confidence            466666666666666666666655442                       144677788888888888888888888888


Q ss_pred             HHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCC------cCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCC
Q psy817          262 ILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHAN------CNERNHKEQIPLHLAAKCQSVECMEMLLRKGS  335 (854)
Q Consensus       262 Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~  335 (854)
                      |+++| ++++.++ ..|.||||+|+..|+.+++++|+++|++      ++..+..|.||||+|+..|+.+++++|+++|+
T Consensus        64 Ll~~g-~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~  141 (236)
T 1ikn_D           64 LLGAG-CDPELRD-FRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGA  141 (236)
T ss_dssp             CCSCC-CCSCCCC-TTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred             HHHcC-CCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            88775 7777665 3566888888888888888888887765      46677888999999999999999999999999


Q ss_pred             CCCCccC-CCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc--ccCCCC
Q psy817          336 QVNASDC-DNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADIS--SKTPSG  412 (854)
Q Consensus       336 ~~~~~~~-~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~~~~g  412 (854)
                      +++..+. .|.||||+|+..+  +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++..  .++..|
T Consensus       142 ~~~~~~~~~g~tpL~~A~~~~--~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~  219 (236)
T 1ikn_D          142 DVNAQEPCNGRTALHLAVDLQ--NPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESED  219 (236)
T ss_dssp             CTTCCCTTTCCCHHHHHHHTT--CHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCT
T ss_pred             CCCCCCCCCCCCHHHHHHHcC--CHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccch
Confidence            9988887 8999999999988  7788999999999999999999999999999999999999999999876  667777


Q ss_pred             CCHHHHH
Q psy817          413 SSALSII  419 (854)
Q Consensus       413 ~t~l~~a  419 (854)
                      .|+.+.+
T Consensus       220 ~~~~~~~  226 (236)
T 1ikn_D          220 EESYDTE  226 (236)
T ss_dssp             TTCCCCC
T ss_pred             HHHHhhh
Confidence            7776544

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.97  E-value=1.6e-31  Score=277.43  Aligned_cols=196  Identities=22%  Similarity=0.262  Sum_probs=176.5

Q ss_pred             CchHHHHHHHcCCHH----HHHHHHHCCCCCCC----CCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCccccc----
Q psy817          210 HETIVHSAVSTNAVD----CVQLLLSLQINPNV----LNNKGVSPLHIAADR---GLISCLKAILDSGMADVDIKT----  274 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~----~v~~Ll~~g~~~~~----~d~~g~t~L~~A~~~---g~~~iv~~Ll~~~~~~~~~~~----  274 (854)
                      |+||||.|+..|+.+    ++++|+++|++++.    .|..|.||||+|+..   |+.+++++|++++ ++++...    
T Consensus         2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g-~~~~~~~~~~~   80 (256)
T 2etb_A            2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQID-KDSGNPKPLVN   80 (256)
T ss_dssp             CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHH-HHTTCSSCGGG
T ss_pred             CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcC-Ccccchhhhcc
Confidence            678888888888886    56777778999998    899999999999999   9999999999986 4444221    


Q ss_pred             ------cCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCC-------------CCCHHHHHHhcCCHHHHHHHHh---
Q psy817          275 ------KERRVTALHLAAENGYVECLRILLENHANCNERNHK-------------EQIPLHLAAKCQSVECMEMLLR---  332 (854)
Q Consensus       275 ------~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-------------g~t~L~~A~~~~~~~~v~~Ll~---  332 (854)
                            +..|.||||+|+..|+.+++++|+++|++++.++..             |.||||+|+..|+.+++++|++   
T Consensus        81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~  160 (256)
T 2etb_A           81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH  160 (256)
T ss_dssp             CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred             cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence                  245789999999999999999999999999999886             9999999999999999999999   


Q ss_pred             CCCCCCCccCCCCcHHHHHHhcCCCChH-------HHHHHHhCCCCC-------ccCCCCCCCHHHHHHHcCCHHHHHHH
Q psy817          333 KGSQVNASDCDNRTPLHASLSKNILSVH-------PLEILLKWGANV-------NARDIFGYSPIHIAALSELSQCVDCL  398 (854)
Q Consensus       333 ~g~~~~~~~~~g~t~L~~a~~~~~~~~~-------~v~~Ll~~g~d~-------n~~d~~g~t~L~~A~~~~~~~~v~~L  398 (854)
                      +|++++..|..|+||||+|+..+..+.+       ++++|+++|+++       +.+|..|.||||+|+..|+.+++++|
T Consensus       161 ~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~L  240 (256)
T 2etb_A          161 QPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHI  240 (256)
T ss_dssp             CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             cCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHH
Confidence            9999999999999999999995555777       999999999999       99999999999999999999999999


Q ss_pred             HHcCCCcc
Q psy817          399 IMHGADIS  406 (854)
Q Consensus       399 l~~ga~~~  406 (854)
                      +++|++..
T Consensus       241 l~~g~~~~  248 (256)
T 2etb_A          241 LQREFSGA  248 (256)
T ss_dssp             HHHHHHHH
T ss_pred             HhCCCCCC
Confidence            99997654

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=99.97  E-value=8.9e-30  Score=244.54  Aligned_cols=158  Identities=33%  Similarity=0.485  Sum_probs=89.8

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHH
Q psy817          246 PLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVE  325 (854)
Q Consensus       246 ~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~  325 (854)
                      +|+.|+++|+.++|+.|+++| +++|.++ ..|.||||+|+..|+.++++.|+++|++++.+|..|.||||+|+..|+.+
T Consensus         7 ~L~~Aa~~G~~~~v~~Ll~~G-advn~~d-~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~   84 (169)
T 4gpm_A            7 RLIEAAENGNKDRVKDLIENG-ADVNASD-SDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKE   84 (169)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTT-CCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred             HHHHHHHcCCHHHHHHHHHCC-CCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHH
Confidence            344444444444444444443 4444433 23335555555555555555555555555556666666666666666666


Q ss_pred             HHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Q psy817          326 CMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADI  405 (854)
Q Consensus       326 ~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~  405 (854)
                      ++++|+++|+++|.+|.+|+||||+|+..|  +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++||++
T Consensus        85 ~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g--~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~i  162 (169)
T 4gpm_A           85 VVKLLISKGADVNAKDSDGRTPLHHAAENG--HKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWL  162 (169)
T ss_dssp             HHHHHHHTTCCTTCCCTTSCCHHHHHHHTT--CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred             HHHHHHHCcCCCCCCCCCCCCHHHHHHHcC--CHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence            666666666666666666666666666666  555666666666666666667777777777777777777777777766


Q ss_pred             cc
Q psy817          406 SS  407 (854)
Q Consensus       406 ~~  407 (854)
                      +.
T Consensus       163 e~  164 (169)
T 4gpm_A          163 EH  164 (169)
T ss_dssp             --
T ss_pred             CC
Confidence            53

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.97  E-value=9.8e-31  Score=274.36  Aligned_cols=210  Identities=20%  Similarity=0.205  Sum_probs=161.5

Q ss_pred             CCccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCCCC----CCCCCCCcHHHHHHHc---C
Q psy817          182 DSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPN----VLNNKGVSPLHIAADR---G  254 (854)
Q Consensus       182 ~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~----~~d~~g~t~L~~A~~~---g  254 (854)
                      .|.||||.|+..|+.++++.|++.+.                       +.+++++    ..|..|.||||+|+..   |
T Consensus        12 ~g~t~L~~A~~~g~~~~v~~Ll~~~~-----------------------~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g   68 (273)
T 2pnn_A           12 YDRRSIFDAVAQSNCQELESLLPFLQ-----------------------RSKKRLTDSEFKDPETGKTCLLKAMLNLHNG   68 (273)
T ss_dssp             CCHHHHHHHHHTTCSSTTTTHHHHHH-----------------------HSCCCTTSGGGSCTTTCCCHHHHHHHSCBTT
T ss_pred             ccchHHHHHHHcCCHHHHHHHHHHHh-----------------------hcccccCCcccccCcCCCCHHHHHHHHHhcC
Confidence            35666666666666666555554321                       2455554    3577888888888876   8


Q ss_pred             CHHHHHHHHHcCCCC-------cccc---ccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCC--------------C
Q psy817          255 LISCLKAILDSGMAD-------VDIK---TKERRVTALHLAAENGYVECLRILLENHANCNERNH--------------K  310 (854)
Q Consensus       255 ~~~iv~~Ll~~~~~~-------~~~~---~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~--------------~  310 (854)
                      +.+++++|++++ ++       ++..   .+..|.||||+|+..|+.+++++|+++|++++..+.              .
T Consensus        69 ~~~~v~~Ll~~g-a~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~  147 (273)
T 2pnn_A           69 QNDTIALLLDVA-RKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYF  147 (273)
T ss_dssp             BCHHHHHHHHHH-HHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCS
T ss_pred             ChHHHHHHHHhh-ccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccC
Confidence            888888888875 32       2221   124677999999999999999999999999988887              7


Q ss_pred             CCCHHHHHHhcCCHHHHHHHHh---CCCCCCCccCCCCcHHHHHHhcCCCC-------hHHHHHHHhCCCCCc-------
Q psy817          311 EQIPLHLAAKCQSVECMEMLLR---KGSQVNASDCDNRTPLHASLSKNILS-------VHPLEILLKWGANVN-------  373 (854)
Q Consensus       311 g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~a~~~~~~~-------~~~v~~Ll~~g~d~n-------  373 (854)
                      |.||||+|+..|+.+++++|++   +|++++..|..|+||||+|+..++..       .+++++|+++|+++|       
T Consensus       148 g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~  227 (273)
T 2pnn_A          148 GELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEE  227 (273)
T ss_dssp             CBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGG
T ss_pred             CCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhccccccccc
Confidence            9999999999999999999999   99999999999999999999988432       688999999999997       


Q ss_pred             cCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CccccCCCCCCH
Q psy817          374 ARDIFGYSPIHIAALSELSQCVDCLIMHGA-DISSKTPSGSSA  415 (854)
Q Consensus       374 ~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~g~t~  415 (854)
                      .+|..|.||||+|+..|+.+++++|+++|+ |+......+.+|
T Consensus       228 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~  270 (273)
T 2pnn_A          228 ITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHH  270 (273)
T ss_dssp             CCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC------------
T ss_pred             ccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhc
Confidence            489999999999999999999999999999 777766666554

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.97  E-value=2.9e-29  Score=250.09  Aligned_cols=191  Identities=22%  Similarity=0.273  Sum_probs=141.4

Q ss_pred             CCCccHHHHHHHcCCHHHHHHHHhCCC-CccccC-CCccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHH
Q psy817          149 NDKYGALHLAAFNGSIKGCSWLMLHGH-DINFTK-DSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCV  226 (854)
Q Consensus       149 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~-~~~~~~-~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v  226 (854)
                      ..+.||||.|+..|+.+.++.|++++. +++..+ +|.||||+|+..|+.                           +++
T Consensus         3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~---------------------------~~v   55 (201)
T 3hra_A            3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDI---------------------------EIA   55 (201)
T ss_dssp             CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCH---------------------------HHH
T ss_pred             cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCH---------------------------HHH
Confidence            357788888888888888888888765 776554 466666666655554                           555


Q ss_pred             HHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcC-CCcC
Q psy817          227 QLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENH-ANCN  305 (854)
Q Consensus       227 ~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~-~~~~  305 (854)
                      ++|+++|++++..|..|.||||+|+..|+.+++++|+++++.+++..+. .|.||||+|+..|+.+++++|+++| ++++
T Consensus        56 ~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~  134 (201)
T 3hra_A           56 KALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNR-YGGNALIPAAEKGHIDNVKLLLEDGREDID  134 (201)
T ss_dssp             HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCT-TSCCSHHHHHHTTCHHHHHHHHHHCCCCTT
T ss_pred             HHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCcC
Confidence            5555556667777777778888888888888888887666667776553 4557888888888888888888777 7777


Q ss_pred             CCCCCCCCHHHHHHhcCC-----HHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCC
Q psy817          306 ERNHKEQIPLHLAAKCQS-----VECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWG  369 (854)
Q Consensus       306 ~~~~~g~t~L~~A~~~~~-----~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g  369 (854)
                      .+|..|.||||+|+..++     .+++++|+++|++++..|..|.||||.|+..+  +.+++++|+++|
T Consensus       135 ~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~--~~~~~~~Ll~~G  201 (201)
T 3hra_A          135 FQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKG--YTEISKILAQYN  201 (201)
T ss_dssp             CCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT--CHHHHHHHHTCC
T ss_pred             CCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcC--CHhHHHHHHhcC
Confidence            777778888888877776     77888888888887777777888888888777  667777777765

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=99.97  E-value=1.7e-29  Score=242.54  Aligned_cols=159  Identities=32%  Similarity=0.465  Sum_probs=143.9

Q ss_pred             hHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCH
Q psy817          212 TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYV  291 (854)
Q Consensus       212 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~  291 (854)
                      ++|+.|++.|+.++|+.|+++|+|+|.+|..|.||||+|+..|+.++++.|++++ ++++.++ ..|.||||+|+..|+.
T Consensus         6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~g-ad~~~~d-~~g~TpLh~A~~~g~~   83 (169)
T 4gpm_A            6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKG-ADVNAKD-SDGRTPLHHAAENGHK   83 (169)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCC-TTSCCHHHHHHHTTCH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcc-cchhhhc-cCCCCHHHHHHHcCCH
Confidence            4688899999999999999999999999999999999999999999999999986 8898876 4567999999999999


Q ss_pred             HHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCC
Q psy817          292 ECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGAN  371 (854)
Q Consensus       292 ~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d  371 (854)
                      +++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|  +.+++++|+++|++
T Consensus        84 ~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g--~~~iv~~Ll~~GA~  161 (169)
T 4gpm_A           84 EVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHG--NEEVVKLLEKQGGW  161 (169)
T ss_dssp             HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT--CHHHHHHHHTC---
T ss_pred             HHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcC--CHHHHHHHHHCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999  78899999999998


Q ss_pred             Ccc
Q psy817          372 VNA  374 (854)
Q Consensus       372 ~n~  374 (854)
                      ++.
T Consensus       162 ie~  164 (169)
T 4gpm_A          162 LEH  164 (169)
T ss_dssp             ---
T ss_pred             cCC
Confidence            865

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.97  E-value=1.7e-32  Score=297.65  Aligned_cols=267  Identities=13%  Similarity=0.092  Sum_probs=201.2

Q ss_pred             CCcHHHHHHH-cCCHHHHHHHHHcCCCCCCCCccHHHHHHHcCCHHHHHHHHhCCCCccc----cCCCccHHHHHHhCCC
Q psy817          121 KTTALLWCVF-VKREDLLDALHQLGADLSNDKYGALHLAAFNGSIKGCSWLMLHGHDINF----TKDSYTPLHFAVLGNY  195 (854)
Q Consensus       121 ~~t~L~~Aa~-~g~~~iv~~Ll~~g~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~----~~~g~t~L~~A~~~~~  195 (854)
                      +.+++++|+. .++.+++++++++|++    +.||||+||..|+.++|++|+++|+....    +..|.||||+|+.+|+
T Consensus        65 ~ll~~~~a~~~~~~~~~~~~l~~~g~~----~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~  140 (376)
T 2aja_A           65 QLLCLYYAHYNRNAKQLWSDAHKKGIK----SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGH  140 (376)
T ss_dssp             HHHHHHHHHTTTTCTTHHHHHHHHTCC----HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhcCCCHHHHHHHHHcCCC----cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCC
Confidence            3467888877 4788999999999874    57999999999999999999999983321    2247899999999999


Q ss_pred             HHHHHHHHhCCCCC--------CchHHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCCCcHHHHHH-HcCCHHHHHHHHH
Q psy817          196 VDCAKFLIKNKAHI--------HETIVHSAVSTNAVDCVQLLLSLQINPNV--LNNKGVSPLHIAA-DRGLISCLKAILD  264 (854)
Q Consensus       196 ~~iv~~Ll~~~~~~--------~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~d~~g~t~L~~A~-~~g~~~iv~~Ll~  264 (854)
                      .+++++|+++|++.        +.||||.|+..|+.++|++|+++|++++.  .|..|.||||+|+ .+|+.+++++|++
T Consensus       141 ~eiv~~Ll~~gad~~~~~i~~~~~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~  220 (376)
T 2aja_A          141 LHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLD  220 (376)
T ss_dssp             HHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTT
T ss_pred             HHHHHHHHhCCCCccccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHh
Confidence            99999999999752        47899999999999999999999999887  8888999999999 9999999999998


Q ss_pred             cCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHH------------HHHHHh
Q psy817          265 SGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVEC------------MEMLLR  332 (854)
Q Consensus       265 ~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~------------v~~Ll~  332 (854)
                      ++ +        .|.||||.|+.+|+.+++++|+++|++++..+    ++++.|+..|+.++            ++.|+.
T Consensus       221 ~g-a--------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~----~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~  287 (376)
T 2aja_A          221 CP-V--------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMH----DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIR  287 (376)
T ss_dssp             SH-H--------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHH----TTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHH
T ss_pred             CC-C--------ccchHHHHHHHCCCHHHHHHHHhcCccccccc----HHHHHHHHCCChhhhcHHhhhhhHHHHHHHHH
Confidence            65 1        25699999999999999999999999887655    37788888888774            345555


Q ss_pred             CCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHh---------CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Q psy817          333 KGSQVNASDCDNRTPLHASLSKNILSVHPLEILLK---------WGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGA  403 (854)
Q Consensus       333 ~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~---------~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga  403 (854)
                      ++..         +           ..+.+++|++         .|+++|    .+.||||+|+..|+.+++++|+++| 
T Consensus       288 ~~~~---------~-----------~~~~~~~Ll~~~~vk~l~~~g~~~n----~~~~~L~~A~~~g~~e~v~lLl~~~-  342 (376)
T 2aja_A          288 RNDE---------V-----------LLDDIRFLLSIPGIKALAPTATIPG----DANELLRLALRLGNQGACALLLSIP-  342 (376)
T ss_dssp             HCCG---------G-----------GHHHHHHHHTSTTTGGGSSCCSSTT----CCCHHHHHHHHHTCTTHHHHHTTSH-
T ss_pred             cchh---------h-----------HHHHHHHHHhChhhhhhhccCCCCC----CccHHHHHHHHcCcHHHHHHHHcCh-
Confidence            4311         1           2344555555         444444    4668999999999999999999876 


Q ss_pred             CccccCCCCCCHHHHHHhcCCcchHHhh
Q psy817          404 DISSKTPSGSSALSIIMRNTPSSISSVR  431 (854)
Q Consensus       404 ~~~~~~~~g~t~l~~a~~~~~~~~~~~~  431 (854)
                        ..++..+.|++..|..++..++..+.
T Consensus       343 --~v~~~~~~~~~~~~~~~~~~~~~~~~  368 (376)
T 2aja_A          343 --SVLALTKANNYYINETGGRLDLRAVA  368 (376)
T ss_dssp             --HHHHSCC-------------------
T ss_pred             --HHHHHHHHhccccccccccccHHHHH
Confidence              56677899999999988887775543

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.96  E-value=2.7e-30  Score=270.99  Aligned_cols=103  Identities=18%  Similarity=0.232  Sum_probs=47.7

Q ss_pred             cCcHHHHHHHcCCHHHHHHHHh---cCCCcCCCCCCCCCHHHHHHhcCC---------HHHHHHHHhCCCCCC-------
Q psy817          278 RVTALHLAAENGYVECLRILLE---NHANCNERNHKEQIPLHLAAKCQS---------VECMEMLLRKGSQVN-------  338 (854)
Q Consensus       278 ~~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~~~~~g~t~L~~A~~~~~---------~~~v~~Ll~~g~~~~-------  338 (854)
                      |.||||+|+..|+.+++++|++   +|++++.+|..|.||||+|+..|+         .+++++|+++|++++       
T Consensus       148 g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~  227 (273)
T 2pnn_A          148 GELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEE  227 (273)
T ss_dssp             CBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGG
T ss_pred             CCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhccccccccc
Confidence            4455555555555555555555   555555555555555555555544         455555555555443       


Q ss_pred             CccCCCCcHHHHHHhcCCCChHHHHHHHhCCC-CCccCCCCCCCH
Q psy817          339 ASDCDNRTPLHASLSKNILSVHPLEILLKWGA-NVNARDIFGYSP  382 (854)
Q Consensus       339 ~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~-d~n~~d~~g~t~  382 (854)
                      ..|..|.||||+|+..|  +.+++++|+++|+ |+......+.+|
T Consensus       228 ~~d~~g~TpL~~A~~~g--~~~iv~~Ll~~ga~dp~~~~~~~~~~  270 (273)
T 2pnn_A          228 ITNRKGLTPLALAASSG--KIGVLAYILQREIHEPECRHAAAHHH  270 (273)
T ss_dssp             CCCTTSCCHHHHHHHTT--CHHHHHHHHHHHTC------------
T ss_pred             ccCCCCCCHHHHHHHhC--hHHHHHHHHHCCCCCchhhhhhhhhc
Confidence            24555555555555555  4455555555555 444444444433

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.96  E-value=3.9e-30  Score=267.07  Aligned_cols=184  Identities=22%  Similarity=0.227  Sum_probs=98.0

Q ss_pred             CccHHHHHHHcCCHH----HHHHHHhCCCCccc----c-CCCccHHHHHHhC---CCHHHHHHHHhCCCCC---------
Q psy817          151 KYGALHLAAFNGSIK----GCSWLMLHGHDINF----T-KDSYTPLHFAVLG---NYVDCAKFLIKNKAHI---------  209 (854)
Q Consensus       151 g~t~L~~A~~~g~~~----iv~~Ll~~g~~~~~----~-~~g~t~L~~A~~~---~~~~iv~~Ll~~~~~~---------  209 (854)
                      |+||||.|+..|+.+    ++++|+++|++++.    . .+|.||||+|+..   |+.+++++|+++|++.         
T Consensus         2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~   81 (256)
T 2etb_A            2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA   81 (256)
T ss_dssp             CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred             CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence            445555555555543    33444444555543    2 2345555555554   5555555555444322         


Q ss_pred             --------CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-------------CCcHHHHHHHcCCHHHHHHHHHc--C
Q psy817          210 --------HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNK-------------GVSPLHIAADRGLISCLKAILDS--G  266 (854)
Q Consensus       210 --------~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~-------------g~t~L~~A~~~g~~~iv~~Ll~~--~  266 (854)
                              |.||||.|+..|+.+++++|+++|++++..|..             |.||||+|+..|+.+++++|+++  .
T Consensus        82 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~  161 (256)
T 2etb_A           82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ  161 (256)
T ss_dssp             CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred             ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence                    444555555555555555555555555555544             56666666666666666666652  2


Q ss_pred             CCCccccccCCcCcHHHHHHH--cCCHH-------HHHHHHhcCCCc-------CCCCCCCCCHHHHHHhcCCHHHHHHH
Q psy817          267 MADVDIKTKERRVTALHLAAE--NGYVE-------CLRILLENHANC-------NERNHKEQIPLHLAAKCQSVECMEML  330 (854)
Q Consensus       267 ~~~~~~~~~~~~~t~L~~A~~--~g~~~-------~v~~Ll~~~~~~-------~~~~~~g~t~L~~A~~~~~~~~v~~L  330 (854)
                      +++++.++ ..|.||||+|+.  .++.+       ++++|+++|+++       +.+|..|.||||+|+..|+.+++++|
T Consensus       162 ga~~n~~d-~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~L  240 (256)
T 2etb_A          162 PASLEATD-SLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHI  240 (256)
T ss_dssp             CCCTTCCC-TTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             CCCcCccC-CCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHH
Confidence            25555544 234466666665  55555       666666666655       55566666666666666666666666


Q ss_pred             HhCCC
Q psy817          331 LRKGS  335 (854)
Q Consensus       331 l~~g~  335 (854)
                      +++|.
T Consensus       241 l~~g~  245 (256)
T 2etb_A          241 LQREF  245 (256)
T ss_dssp             HHHHH
T ss_pred             HhCCC
Confidence            65554

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.96  E-value=1.4e-29  Score=263.44  Aligned_cols=196  Identities=22%  Similarity=0.221  Sum_probs=169.3

Q ss_pred             CchHHHHHHHcCCHHHHH----HHHHCCCCCCCCC----CCCCcHHHHHH---HcCCHHHHHHHHHcCCCC---------
Q psy817          210 HETIVHSAVSTNAVDCVQ----LLLSLQINPNVLN----NKGVSPLHIAA---DRGLISCLKAILDSGMAD---------  269 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~----~Ll~~g~~~~~~d----~~g~t~L~~A~---~~g~~~iv~~Ll~~~~~~---------  269 (854)
                      ++++||.|+..|+.+.++    +|++.|++++..+    ..|.||||+|+   ..|+.+++++|++.+ ++         
T Consensus         5 ~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g-~~~~~~~~~~~   83 (260)
T 3jxi_A            5 NRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIA-EKTGNMREFIN   83 (260)
T ss_dssp             CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHH-HHTTCHHHHHT
T ss_pred             hHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhc-ccccchHhhhc
Confidence            567777777777777444    4445888888665    77999999999   779999999999976 22         


Q ss_pred             --ccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCC--------------CCCCCHHHHHHhcCCHHHHHHHHh-
Q psy817          270 --VDIKTKERRVTALHLAAENGYVECLRILLENHANCNERN--------------HKEQIPLHLAAKCQSVECMEMLLR-  332 (854)
Q Consensus       270 --~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~--------------~~g~t~L~~A~~~~~~~~v~~Ll~-  332 (854)
                        ++.. +..|.||||+|+..|+.++|++|+++|++++..+              ..|.||||+|+..|+.+++++|++ 
T Consensus        84 ~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~  162 (260)
T 3jxi_A           84 SPFRDV-YYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTEN  162 (260)
T ss_dssp             CCBCCS-SEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred             cccccc-ccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence              1211 1367799999999999999999999999999998              689999999999999999999999 


Q ss_pred             --CCCCCCCccCCCCcHHHHHHhcCCCC-------hHHHHHHHhCCCCC-------ccCCCCCCCHHHHHHHcCCHHHHH
Q psy817          333 --KGSQVNASDCDNRTPLHASLSKNILS-------VHPLEILLKWGANV-------NARDIFGYSPIHIAALSELSQCVD  396 (854)
Q Consensus       333 --~g~~~~~~~~~g~t~L~~a~~~~~~~-------~~~v~~Ll~~g~d~-------n~~d~~g~t~L~~A~~~~~~~~v~  396 (854)
                        +|++++..|..|+||||+|+..++..       .+++++|+++|+++       +.+|..|.||||+|+..|+.++++
T Consensus       163 ~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~  242 (260)
T 3jxi_A          163 GHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQ  242 (260)
T ss_dssp             SSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred             cccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHH
Confidence              99999999999999999999887433       58899999999998       779999999999999999999999


Q ss_pred             HHHHcCCCccc
Q psy817          397 CLIMHGADISS  407 (854)
Q Consensus       397 ~Ll~~ga~~~~  407 (854)
                      +|+++|++...
T Consensus       243 ~Ll~~g~~~~~  253 (260)
T 3jxi_A          243 HIIRREIADAA  253 (260)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHhCCCccc
Confidence            99999977544

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.96  E-value=5e-29  Score=259.31  Aligned_cols=185  Identities=21%  Similarity=0.197  Sum_probs=93.6

Q ss_pred             CCccHHHHHHHcCCHHHH----HHHHhCCCCcccc-----CCCccHHHHHH---hCCCHHHHHHHHhCCCCC--------
Q psy817          150 DKYGALHLAAFNGSIKGC----SWLMLHGHDINFT-----KDSYTPLHFAV---LGNYVDCAKFLIKNKAHI--------  209 (854)
Q Consensus       150 ~g~t~L~~A~~~g~~~iv----~~Ll~~g~~~~~~-----~~g~t~L~~A~---~~~~~~iv~~Ll~~~~~~--------  209 (854)
                      .|+||||.|+..|+.+.+    ++|+++|++++..     .+|.||||+|+   ..|+.+++++|++.|++.        
T Consensus         4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~   83 (260)
T 3jxi_A            4 FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFIN   83 (260)
T ss_dssp             CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHT
T ss_pred             chHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhc
Confidence            345555555555555532    2233355555432     22555555555   445555555555554432        


Q ss_pred             ---------CchHHHHHHHcCCHHHHHHHHHCCCCCCCCC--------------CCCCcHHHHHHHcCCHHHHHHHHHc-
Q psy817          210 ---------HETIVHSAVSTNAVDCVQLLLSLQINPNVLN--------------NKGVSPLHIAADRGLISCLKAILDS-  265 (854)
Q Consensus       210 ---------~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d--------------~~g~t~L~~A~~~g~~~iv~~Ll~~-  265 (854)
                               |.||||.|+..|+.++|++|+++|++++..+              ..|.||||+|+..|+.+++++|++. 
T Consensus        84 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~  163 (260)
T 3jxi_A           84 SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENG  163 (260)
T ss_dssp             CCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred             ccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence                     3444444444444555555555555555554              3455555555555555555555552 


Q ss_pred             -CCCCccccccCCcCcHHHHHHHcCC---------HHHHHHHHhcCCCc-------CCCCCCCCCHHHHHHhcCCHHHHH
Q psy817          266 -GMADVDIKTKERRVTALHLAAENGY---------VECLRILLENHANC-------NERNHKEQIPLHLAAKCQSVECME  328 (854)
Q Consensus       266 -~~~~~~~~~~~~~~t~L~~A~~~g~---------~~~v~~Ll~~~~~~-------~~~~~~g~t~L~~A~~~~~~~~v~  328 (854)
                       .+++++.++ ..|.||||+|+..|+         .+++++|+++|+++       +.+|..|.||||+|+..|+.++++
T Consensus       164 ~~ga~~~~~d-~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~  242 (260)
T 3jxi_A          164 HKQADLRRQD-SRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQ  242 (260)
T ss_dssp             SCCCCTTCCC-TTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred             ccCCCCcccC-CCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHH
Confidence             125555443 233455555555444         45555555555554       345555555555555555555555


Q ss_pred             HHHhCCC
Q psy817          329 MLLRKGS  335 (854)
Q Consensus       329 ~Ll~~g~  335 (854)
                      +|+++|.
T Consensus       243 ~Ll~~g~  249 (260)
T 3jxi_A          243 HIIRREI  249 (260)
T ss_dssp             HHHHHHH
T ss_pred             HHHHhCC
Confidence            5555544

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.95  E-value=1.8e-30  Score=281.69  Aligned_cols=242  Identities=14%  Similarity=0.079  Sum_probs=179.4

Q ss_pred             ccCCcHHHHHHHcCCHHHHHHHHHcCC------CCCCCCccHHHHHHHcCCHHHHHHHHhCCCCc---cccCCCccHHHH
Q psy817          119 AEKTTALLWCVFVKREDLLDALHQLGA------DLSNDKYGALHLAAFNGSIKGCSWLMLHGHDI---NFTKDSYTPLHF  189 (854)
Q Consensus       119 ~~~~t~L~~Aa~~g~~~iv~~Ll~~g~------~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~---~~~~~g~t~L~~  189 (854)
                      .++.||||+||..|+.++|++|+++|+      ++|..|.||||+||.+|+.++|++|+++|+|+   +....+.||||+
T Consensus        90 ~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~TpLh~  169 (376)
T 2aja_A           90 IKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRL  169 (376)
T ss_dssp             CCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHH
T ss_pred             CCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCHHHH
Confidence            345699999999999999999999998      55668899999999999999999999999863   333323999999


Q ss_pred             HHhCCCHHHHHHHHhCCCCC--------CchHHHHHH-HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHH
Q psy817          190 AVLGNYVDCAKFLIKNKAHI--------HETIVHSAV-STNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLK  260 (854)
Q Consensus       190 A~~~~~~~iv~~Ll~~~~~~--------~~t~L~~A~-~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~  260 (854)
                      |+.+|+.+++++|+++|+++        |.||||.|+ .+|+.++|++|+++|++       |.||||.|+.+|+.++++
T Consensus       170 Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~Aa~~g~~evv~  242 (376)
T 2aja_A          170 AAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEFEYGEKYVNP  242 (376)
T ss_dssp             HHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH-------HHHHHHCTTTTTTTTHHH
T ss_pred             HHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc-------cchHHHHHHHCCCHHHHH
Confidence            99999999999999999983        689999999 99999999999998743       889999999999999999


Q ss_pred             HHHHcCCCCccccccCCcCcHHHHHHHcCCHHHH------------HHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHH
Q psy817          261 AILDSGMADVDIKTKERRVTALHLAAENGYVECL------------RILLENHANCNERNHKEQIPLHLAAKCQSVECME  328 (854)
Q Consensus       261 ~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v------------~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~  328 (854)
                      +|++++ ++++..+     ++++.|+.+|+.+++            +.|+.++.                  .+..+.++
T Consensus       243 lL~~~g-a~~~~~~-----~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~------------------~~~~~~~~  298 (376)
T 2aja_A          243 FIARHV-NRLKEMH-----DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRND------------------EVLLDDIR  298 (376)
T ss_dssp             HHHHHH-HHHHHHH-----TTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCC------------------GGGHHHHH
T ss_pred             HHHhcC-ccccccc-----HHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcch------------------hhHHHHHH
Confidence            999987 5555433     578899999988743            44555431                  23356677


Q ss_pred             HHHhC---------CCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHH
Q psy817          329 MLLRK---------GSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLI  399 (854)
Q Consensus       329 ~Ll~~---------g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll  399 (854)
                      +|++.         |+++    ..+.||||.|+..|  +.+++++|++.|   ..++..+.|++.+|-.+|+.++++.-+
T Consensus       299 ~Ll~~~~vk~l~~~g~~~----n~~~~~L~~A~~~g--~~e~v~lLl~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~  369 (376)
T 2aja_A          299 FLLSIPGIKALAPTATIP----GDANELLRLALRLG--NQGACALLLSIP---SVLALTKANNYYINETGGRLDLRAVAL  369 (376)
T ss_dssp             HHHTSTTTGGGSSCCSST----TCCCHHHHHHHHHT--CTTHHHHHTTSH---HHHHSCC--------------------
T ss_pred             HHHhChhhhhhhccCCCC----CCccHHHHHHHHcC--cHHHHHHHHcCh---HHHHHHHHhccccccccccccHHHHHH
Confidence            77763         4443    34668999999999  667799999875   667778999999999999999887655


Q ss_pred             H
Q psy817          400 M  400 (854)
Q Consensus       400 ~  400 (854)
                      .
T Consensus       370 ~  370 (376)
T 2aja_A          370 E  370 (376)
T ss_dssp             -
T ss_pred             H
Confidence            4

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.95  E-value=4.6e-28  Score=253.86  Aligned_cols=189  Identities=19%  Similarity=0.228  Sum_probs=168.6

Q ss_pred             chHHHHHHHcCCHHHHHHHHHCCCC--CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHH--
Q psy817          211 ETIVHSAVSTNAVDCVQLLLSLQIN--PNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAA--  286 (854)
Q Consensus       211 ~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~--  286 (854)
                      .+++|.|+..|+.+.++.+++.+.+  +|..|.+|.||||+|+..|+.+++++|++.+..+++..+ ..|.||||+|+  
T Consensus        77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~-~~g~tpL~~a~~~  155 (276)
T 4hbd_A           77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQN-RAGYSPIMLTALA  155 (276)
T ss_dssp             STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCC-TTSCCHHHHGGGC
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCC-CCCCCHHHHHHHH
Confidence            3456666677777777777666544  788899999999999999999999999999855888765 45679999999  


Q ss_pred             ---HcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHH
Q psy817          287 ---ENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLE  363 (854)
Q Consensus       287 ---~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~  363 (854)
                         ..++.++++.|++.|.+.+..+..|.||||+|+..|+.+++++|+++|+++|..|..|+||||+|+..|  +.++++
T Consensus       156 ~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g--~~~iv~  233 (276)
T 4hbd_A          156 TLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHG--HKEIAG  233 (276)
T ss_dssp             CCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT--CHHHHH
T ss_pred             HhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCC--CHHHHH
Confidence               668899999999999999999999999999999999999999999999999999999999999999999  788999


Q ss_pred             HHHh-CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q psy817          364 ILLK-WGANVNARDIFGYSPIHIAALSELSQCVDCLIMHG  402 (854)
Q Consensus       364 ~Ll~-~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g  402 (854)
                      +|++ .|++++.+|..|.||||+|+..|+.+++++|++++
T Consensus       234 ~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~  273 (276)
T 4hbd_A          234 LLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM  273 (276)
T ss_dssp             HHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred             HHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence            9999 89999999999999999999999999999999875

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.95  E-value=1.9e-27  Score=230.50  Aligned_cols=170  Identities=25%  Similarity=0.295  Sum_probs=145.8

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcC
Q psy817          243 GVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQ  322 (854)
Q Consensus       243 g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~  322 (854)
                      +.||||.|+..|+.++++.|++.+...++.++ ..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   80 (172)
T 3v30_A            2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPD-ERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGG   80 (172)
T ss_dssp             --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCC-TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTT
T ss_pred             chhhHHHHHHcCCHHHHHHHHHcCcccccCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCC
Confidence            46789999999999999999988754466554 56679999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q psy817          323 SVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHG  402 (854)
Q Consensus       323 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g  402 (854)
                      +.+++++|+++|++++..|..|.||||.|+..+  +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus        81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~  158 (172)
T 3v30_A           81 YTDIVGLLLERDVDINIYDWNGGTPLLYAVRGN--HVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHI  158 (172)
T ss_dssp             CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTT--CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC--CHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHH
Confidence            999999999999999999999999999999998  788899999999999999999999999999999999999999999


Q ss_pred             CCccccCCCCCCH
Q psy817          403 ADISSKTPSGSSA  415 (854)
Q Consensus       403 a~~~~~~~~g~t~  415 (854)
                      +++..++..|.||
T Consensus       159 ~~~~~~~~~~~~p  171 (172)
T 3v30_A          159 LKLFQSNLVPADP  171 (172)
T ss_dssp             HHHSCC-------
T ss_pred             HHHhcccCCCCCC
Confidence            9998888888776

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.95  E-value=7.5e-27  Score=230.69  Aligned_cols=163  Identities=21%  Similarity=0.274  Sum_probs=145.2

Q ss_pred             CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHH
Q psy817          236 PNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPL  315 (854)
Q Consensus       236 ~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L  315 (854)
                      +|.+|..|.||||+|+..|+.+++++|++++ ++++..+ ..|.||||+|+..|+.+++++|+++|++++..|..|.|||
T Consensus        28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L  105 (192)
T 2rfm_A           28 RNYRDSYNRTPLMVACMLGMENAIDKLVENF-DKLEDKD-IEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPL  105 (192)
T ss_dssp             HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHH-CCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHH
T ss_pred             HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhc-ccccccc-ccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Confidence            4667888999999999999999999999886 7777665 3567999999999999999999999999999999999999


Q ss_pred             HHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHH
Q psy817          316 HLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCV  395 (854)
Q Consensus       316 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v  395 (854)
                      |+|+..|+.+++++|+++|++++..|..|.||||.|+..+  +.+++++|+++|++++.+|..|.||||+|+..|+.+++
T Consensus       106 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v  183 (192)
T 2rfm_A          106 MWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYG--RSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVI  183 (192)
T ss_dssp             HHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHT--CHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHH
T ss_pred             HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC--CHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHH
Confidence            9999999999999999999999999999999999999998  77889999999999999999999999999999999999


Q ss_pred             HHHHHcC
Q psy817          396 DCLIMHG  402 (854)
Q Consensus       396 ~~Ll~~g  402 (854)
                      ++|+++|
T Consensus       184 ~~Ll~~~  190 (192)
T 2rfm_A          184 KIFTEVR  190 (192)
T ss_dssp             HHHHHHH
T ss_pred             HHHHhcc
Confidence            9998875

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.94  E-value=1.2e-26  Score=224.82  Aligned_cols=168  Identities=24%  Similarity=0.361  Sum_probs=132.0

Q ss_pred             chHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcC
Q psy817          211 ETIVHSAVSTNAVDCVQLLLSLQIN-PNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENG  289 (854)
Q Consensus       211 ~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g  289 (854)
                      .+|||.|+..|+.+++++|++.|.+ ++..|..|.||||+|+..|+.+++++|++++ ++++..+. .|.||||+|+..|
T Consensus         3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~-~g~t~L~~A~~~~   80 (172)
T 3v30_A            3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWG-ADPHILAK-ERESALSLASTGG   80 (172)
T ss_dssp             -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCT-TCCCHHHHHHHTT
T ss_pred             hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCchhhcc-cCCCHHHHHHHCC
Confidence            4677777777777777777777666 6777888888888888888888888888876 77776654 4568888888888


Q ss_pred             CHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCC
Q psy817          290 YVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWG  369 (854)
Q Consensus       290 ~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g  369 (854)
                      +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||.|+..+  +.+++++|+++|
T Consensus        81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~--~~~~~~~L~~~~  158 (172)
T 3v30_A           81 YTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALG--YRKVQQVIENHI  158 (172)
T ss_dssp             CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT--CHHHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhC--cHHHHHHHHHHH
Confidence            888888888888888888888888888888888888888888888888888888888888888888  777888888888


Q ss_pred             CCCccCCCCCCCH
Q psy817          370 ANVNARDIFGYSP  382 (854)
Q Consensus       370 ~d~n~~d~~g~t~  382 (854)
                      +++...+..|.||
T Consensus       159 ~~~~~~~~~~~~p  171 (172)
T 3v30_A          159 LKLFQSNLVPADP  171 (172)
T ss_dssp             HHHSCC-------
T ss_pred             HHHhcccCCCCCC
Confidence            8888777777776

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.94  E-value=2.4e-26  Score=221.50  Aligned_cols=161  Identities=23%  Similarity=0.284  Sum_probs=126.7

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhc
Q psy817          242 KGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKC  321 (854)
Q Consensus       242 ~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~  321 (854)
                      .|.||||.|+..|+.+++++|++.+ ++++.++ ..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..
T Consensus         2 ~~~t~L~~A~~~g~~~~v~~ll~~~-~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~   79 (167)
T 3v31_A            2 ANSLSVHQLAAQGEMLYLATRIEQE-NVINHTD-EEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSK   79 (167)
T ss_dssp             TTCCCHHHHHHTTCHHHHHHHHHHS-SCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred             CCcchHHHHHHCCCHHHHHHHHHcC-CCcCCCC-CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHc
Confidence            4667777777777777777777775 6666554 3455778888877888888888888877777788888888888888


Q ss_pred             CCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q psy817          322 QSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMH  401 (854)
Q Consensus       322 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~  401 (854)
                      |+.+++++|+++|++++..|..|.||||.|+..+  +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++
T Consensus        80 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~  157 (167)
T 3v31_A           80 GYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGN--HVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESH  157 (167)
T ss_dssp             TCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTT--CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcC--CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHH
Confidence            8888888888888888888888888888888877  67778888888888888888888888888888888888888887


Q ss_pred             CCCcc
Q psy817          402 GADIS  406 (854)
Q Consensus       402 ga~~~  406 (854)
                      +++..
T Consensus       158 ~~~~~  162 (167)
T 3v31_A          158 LLKLL  162 (167)
T ss_dssp             HHHHC
T ss_pred             HHHHH
Confidence            76543

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.94  E-value=2e-26  Score=224.81  Aligned_cols=169  Identities=20%  Similarity=0.234  Sum_probs=144.6

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHh
Q psy817          241 NKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAK  320 (854)
Q Consensus       241 ~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~  320 (854)
                      .++.++|+.|+..|+.++++.|++.++.+++..+ ..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+.
T Consensus         3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~   81 (179)
T 3f6q_A            3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGD-DHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAAS   81 (179)
T ss_dssp             ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence            4567888888888888888888888767777665 456689999999999999999999999998888999999999999


Q ss_pred             cCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q psy817          321 CQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIM  400 (854)
Q Consensus       321 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~  400 (854)
                      .|+.+++++|+++|++++..|..|.||||.|+..+  +.+++++|+++|++++.+|..|.|||++|+..++.+++++|++
T Consensus        82 ~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~--~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~  159 (179)
T 3f6q_A           82 HGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWG--QDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEK  159 (179)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT--CHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC--CHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999988  7788999999999999999999999999999999999999999


Q ss_pred             cCCCccccCCCC
Q psy817          401 HGADISSKTPSG  412 (854)
Q Consensus       401 ~ga~~~~~~~~g  412 (854)
                      +|++++..+..+
T Consensus       160 ~g~~~~~~~~~~  171 (179)
T 3f6q_A          160 MGQNLNRIPYKD  171 (179)
T ss_dssp             TTCCCSCBCCCC
T ss_pred             hhcCcccCCccc
Confidence            999988766544

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.94  E-value=4.8e-26  Score=219.79  Aligned_cols=156  Identities=35%  Similarity=0.453  Sum_probs=93.4

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcC
Q psy817          243 GVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQ  322 (854)
Q Consensus       243 g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~  322 (854)
                      +.++|+.|+..|+.+++++|++++ ++++.++ ..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|
T Consensus        14 ~~~~l~~A~~~g~~~~v~~Ll~~g-~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   91 (169)
T 2y1l_E           14 LGKKLLEAARAGRDDEVRILMANG-ADVNAED-ASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFG   91 (169)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHTT-CCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             ccchHHHHHHcCCHHHHHHHHHCC-CCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence            344555555555555555555543 4444433 23345555555555555555555555555566666666666666666


Q ss_pred             CHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q psy817          323 SVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHG  402 (854)
Q Consensus       323 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g  402 (854)
                      +.+++++|+++|++++..|..|.||||.|+..+  +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus        92 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G  169 (169)
T 2y1l_E           92 HLEIVEVLLKNGADVNANDMEGHTPLHLAAMFG--HLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN  169 (169)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT--CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred             CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC--CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence            666666666666666666666666666666666  555666666666666666666667777777777777777776654

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.94  E-value=2.3e-26  Score=220.39  Aligned_cols=156  Identities=26%  Similarity=0.315  Sum_probs=96.6

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCC
Q psy817          244 VSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQS  323 (854)
Q Consensus       244 ~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~  323 (854)
                      .||||.|+..|+.+++++|++++ ++++..+ ..|.||||+|+. |+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus         6 ~~~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~-~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~   82 (162)
T 1ihb_A            6 GNELASAAARGDLEQLTSLLQNN-VNVNAQN-GFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGF   82 (162)
T ss_dssp             HHHHHHHHHHTCHHHHHHHTTSC-CCTTCCC-TTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred             hhHHHHHHHcCCHHHHHHHHhCC-CCccccC-ccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence            34555555555555555555443 4444433 234455555555 55556666666666666666666666666666666


Q ss_pred             HHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCC-CccCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q psy817          324 VECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGAN-VNARDIFGYSPIHIAALSELSQCVDCLIMHG  402 (854)
Q Consensus       324 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g  402 (854)
                      .+++++|+++|++++..|..|.||||.|+..+  +.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|
T Consensus        83 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G  160 (162)
T 1ihb_A           83 LDTLQTLLEFQADVNIEDNEGNLPLHLAAKEG--HLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG  160 (162)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT--CHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred             HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC--CHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Confidence            66666666666666666666666666666666  55666666666665 4677777778888888888888888888887


Q ss_pred             CC
Q psy817          403 AD  404 (854)
Q Consensus       403 a~  404 (854)
                      ||
T Consensus       161 Ad  162 (162)
T 1ihb_A          161 AG  162 (162)
T ss_dssp             --
T ss_pred             CC
Confidence            75

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.94  E-value=3.5e-29  Score=254.17  Aligned_cols=179  Identities=18%  Similarity=0.137  Sum_probs=125.0

Q ss_pred             hHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCH
Q psy817          212 TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYV  291 (854)
Q Consensus       212 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~  291 (854)
                      ||||.|+..|+.+++++|+++|+++|..|..|.||||+|+..|+.+++++|++++ ++++.++. .|.||||+|+..|+.
T Consensus        23 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-a~~n~~d~-~g~tpLh~A~~~g~~  100 (229)
T 2vge_A           23 VLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAG-ANVNSPDS-HGWTPLHCAASCNDT  100 (229)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCT-TCCCHHHHHHHTTCH
T ss_pred             HHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCC-CCCCHHHHHHHcCCH
Confidence            4455555555556666666666677777777777777777777777777777765 77776653 556777777777777


Q ss_pred             HHHHHHHhcCCCcCCCC-CCCCCHHHHH--HhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhC
Q psy817          292 ECLRILLENHANCNERN-HKEQIPLHLA--AKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKW  368 (854)
Q Consensus       292 ~~v~~Ll~~~~~~~~~~-~~g~t~L~~A--~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~  368 (854)
                      +++++|+++|++++..+ ..|.||||+|  +..|+.+++++|+++|++++..|..|.|+++.++..+.     .++|++.
T Consensus       101 ~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~-----~~~ll~~  175 (229)
T 2vge_A          101 VICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFG-----DELSFRE  175 (229)
T ss_dssp             HHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSST-----TBCCBCT
T ss_pred             HHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccc-----cccCccc
Confidence            77777777777777765 5777777777  77777777777777777777777777777775444331     2455666


Q ss_pred             CCC--CccCCCCCCCHHHHHHHcCCHHHHHH
Q psy817          369 GAN--VNARDIFGYSPIHIAALSELSQCVDC  397 (854)
Q Consensus       369 g~d--~n~~d~~g~t~L~~A~~~~~~~~v~~  397 (854)
                      |++  ++.+|..|+||||+|+..|+.++|+.
T Consensus       176 ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~  206 (229)
T 2vge_A          176 GESVTVLRRDGPEETDWWWAALHGQEGYVPR  206 (229)
T ss_dssp             TCEEEEEESSCTTCSSEEEEEETTEEEEEEG
T ss_pred             cccccccccCCCcccHHHHHHHcCCcceeeh
Confidence            766  56667777777777777777666654

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.94  E-value=9.4e-26  Score=217.71  Aligned_cols=156  Identities=32%  Similarity=0.436  Sum_probs=136.8

Q ss_pred             CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcC
Q psy817          210 HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENG  289 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g  289 (854)
                      +.++++.|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++++ ++++..+ ..|.||||+|+..|
T Consensus        14 ~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~-~~g~t~L~~A~~~~   91 (169)
T 2y1l_E           14 LGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNG-ADVNAVD-HAGMTPLRLAALFG   91 (169)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCC-TTSCCHHHHHHHTT
T ss_pred             ccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccC-CCCCCHHHHHHHcC
Confidence            467888888888888888888889899989999999999999999999999999886 7787765 45669999999999


Q ss_pred             CHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCC
Q psy817          290 YVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWG  369 (854)
Q Consensus       290 ~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g  369 (854)
                      +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||+|.|+..+  +.+++++|++.|
T Consensus        92 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~--~~~~~~~L~~~G  169 (169)
T 2y1l_E           92 HLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNG--NEDLAEILQKLN  169 (169)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT--CHHHHHHHHTC-
T ss_pred             CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhC--CHHHHHHHHHcC
Confidence            999999999999999999999999999999999999999999999999989999999999999988  778899988875

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.94  E-value=5.3e-26  Score=224.58  Aligned_cols=167  Identities=22%  Similarity=0.235  Sum_probs=138.0

Q ss_pred             HHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCc
Q psy817          199 AKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERR  278 (854)
Q Consensus       199 v~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~  278 (854)
                      .+++++.....|.||||.|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++++ ++++..+ ..|
T Consensus        24 ~~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~-~~g  101 (192)
T 2rfm_A           24 LDFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKG-SNVNTKD-FSG  101 (192)
T ss_dssp             HHHHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCC-TTS
T ss_pred             hHHHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCC-CCCCCCC-CCC
Confidence            34455555556778888888888888888888888888888888888888888888888888888886 7777665 356


Q ss_pred             CcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCC
Q psy817          279 VTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILS  358 (854)
Q Consensus       279 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~  358 (854)
                      .||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||+|.|+..+  +
T Consensus       102 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~--~  179 (192)
T 2rfm_A          102 KTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFG--R  179 (192)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTT--C
T ss_pred             CcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhC--c
Confidence            68888888888888888888888888888888888888888888888888888888888888888888888888888  7


Q ss_pred             hHHHHHHHhCC
Q psy817          359 VHPLEILLKWG  369 (854)
Q Consensus       359 ~~~v~~Ll~~g  369 (854)
                      .+++++|+++|
T Consensus       180 ~~~v~~Ll~~~  190 (192)
T 2rfm_A          180 QEVIKIFTEVR  190 (192)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHhcc
Confidence            78888888764

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.94  E-value=6.7e-26  Score=217.10  Aligned_cols=157  Identities=24%  Similarity=0.334  Sum_probs=127.4

Q ss_pred             CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcC
Q psy817          210 HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENG  289 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g  289 (854)
                      ..||||.|+..|+.+++++|+++|++++..|..|.||||+|+. |+.+++++|++++ ++++.++ ..|.||||+|+..|
T Consensus         5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g-~~~~~~~-~~g~t~L~~A~~~~   81 (162)
T 1ihb_A            5 WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRG-ANPDLKD-RTGFAVIHDAARAG   81 (162)
T ss_dssp             CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTT-CCTTCCC-TTSCCHHHHHHHHT
T ss_pred             HhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcC-CCCCCCC-CCCCCHHHHHHHcC
Confidence            4577888888888888888888888888888888888888888 8888888888875 7777665 35568888888888


Q ss_pred             CHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCC-CCCccCCCCcHHHHHHhcCCCChHHHHHHHhC
Q psy817          290 YVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQ-VNASDCDNRTPLHASLSKNILSVHPLEILLKW  368 (854)
Q Consensus       290 ~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~  368 (854)
                      +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++ ++..+..|.||||.|+..+  +.+++++|+++
T Consensus        82 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~--~~~~~~~Ll~~  159 (162)
T 1ihb_A           82 FLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYG--RNEVVSLMQAN  159 (162)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTT--CHHHHHHHHHT
T ss_pred             CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcC--CHHHHHHHHHh
Confidence            88888888888888888888888888888888888888888888887 5788888888888888888  77788888888


Q ss_pred             CCC
Q psy817          369 GAN  371 (854)
Q Consensus       369 g~d  371 (854)
                      |+|
T Consensus       160 GAd  162 (162)
T 1ihb_A          160 GAG  162 (162)
T ss_dssp             C--
T ss_pred             CCC
Confidence            875

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.93  E-value=1.2e-25  Score=213.11  Aligned_cols=150  Identities=28%  Similarity=0.377  Sum_probs=102.6

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCC
Q psy817          244 VSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQS  323 (854)
Q Consensus       244 ~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~  323 (854)
                      .|||+.|+..|+.+++++|++++ ++++  .+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus         3 ~~~L~~A~~~g~~~~v~~Ll~~g-~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~   79 (153)
T 1awc_B            3 GKKLLEAARAGQDDEVRILMANG-APFT--TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGH   79 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHT-CCCC--CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred             cHHHHHHHHcCCHHHHHHHHHcC-CCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCh
Confidence            35666666666666666666665 3433  23445567777777777777777777777777777777777777777777


Q ss_pred             HHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHH
Q psy817          324 VECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCL  398 (854)
Q Consensus       324 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~L  398 (854)
                      .+++++|+++|++++..|..|.||||.|+..+  +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|
T Consensus        80 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L  152 (153)
T 1awc_B           80 ANIVEVLLKHGADVNAKDMLKMTALHWATEHN--HQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTT--CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC--CHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence            77777777777777777777777777777766  56667777777777777777777777777777777777665

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.93  E-value=7.1e-26  Score=237.16  Aligned_cols=188  Identities=20%  Similarity=0.228  Sum_probs=125.6

Q ss_pred             CccHHHHHHHcCCHHHHHHHHhCCCC--ccccC-CCccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHH
Q psy817          151 KYGALHLAAFNGSIKGCSWLMLHGHD--INFTK-DSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQ  227 (854)
Q Consensus       151 g~t~L~~A~~~g~~~iv~~Ll~~g~~--~~~~~-~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~  227 (854)
                      +.+++|.|+..|+.+.++.+++.+.+  +|..+ +|.||||+|+..|+.+++++|++                       
T Consensus        76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~-----------------------  132 (276)
T 4hbd_A           76 CRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLD-----------------------  132 (276)
T ss_dssp             HSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHH-----------------------
T ss_pred             hccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHH-----------------------
Confidence            34567777777888877777766554  44433 35666666666555555555554                       


Q ss_pred             HHHHCCC-CCCCCCCCCCcHHHHHH-----HcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcC
Q psy817          228 LLLSLQI-NPNVLNNKGVSPLHIAA-----DRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENH  301 (854)
Q Consensus       228 ~Ll~~g~-~~~~~d~~g~t~L~~A~-----~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~  301 (854)
                          +|+ +++..|..|.||||+|+     ..++.++++.|++.+ .+.+.. +..|.||||+|+..|+.+++++|+++|
T Consensus       133 ----~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g-~~~~~~-~~~g~tpLh~A~~~g~~~~v~~Ll~~g  206 (276)
T 4hbd_A          133 ----SGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLG-NINAKA-SQAGQTALMLAVSHGRVDVVKALLACE  206 (276)
T ss_dssp             ----TSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHS-CTTCCC-TTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred             ----CCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcC-CCcccc-CCCCCCHHHHHHHcCCHHHHHHHHhCC
Confidence                454 56666777777777777     556677777777765 444433 244557777777777777777777777


Q ss_pred             CCcCCCCCCCCCHHHHHHhcCCHHHHHHHHh-CCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCC
Q psy817          302 ANCNERNHKEQIPLHLAAKCQSVECMEMLLR-KGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWG  369 (854)
Q Consensus       302 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g  369 (854)
                      ++++.+|..|.||||+|+..|+.+++++|++ .|++++..|..|.||||+|+..|  +.+++++|++++
T Consensus       207 ad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g--~~~iv~~Ll~~~  273 (276)
T 4hbd_A          207 ADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAG--QSEIASMLYSRM  273 (276)
T ss_dssp             CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHT--CHHHHHHHHHHC
T ss_pred             CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcC--CHHHHHHHHhcc
Confidence            7777777777777777777777777777777 67777777777777777777777  666677777653

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.93  E-value=3.9e-26  Score=219.47  Aligned_cols=161  Identities=25%  Similarity=0.316  Sum_probs=131.0

Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHH
Q psy817          239 LNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLA  318 (854)
Q Consensus       239 ~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A  318 (854)
                      .|.+|.||||.|+..|+.++++.|++.++.+++..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|
T Consensus         4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A   82 (165)
T 3twr_A            4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIE-GRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNA   82 (165)
T ss_dssp             --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTT-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccc-cCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHH
Confidence            355677888888888888888888876655555443 3456888888888888888888888888888888888888888


Q ss_pred             HhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHH
Q psy817          319 AKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCL  398 (854)
Q Consensus       319 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~L  398 (854)
                      +..|+.+++++|+++|++++..|..|.||||.|+..+  +.+++++|+++|++++.+|..|.||||+|+. |+.+++++|
T Consensus        83 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L  159 (165)
T 3twr_A           83 CSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKG--KYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLL  159 (165)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT--CHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHH
T ss_pred             HHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcC--CHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHH
Confidence            8888888888888888888888888888888888888  7788888888888888888888888888766 888888888


Q ss_pred             HHcCC
Q psy817          399 IMHGA  403 (854)
Q Consensus       399 l~~ga  403 (854)
                      +++|+
T Consensus       160 ~~~gA  164 (165)
T 3twr_A          160 RGDAA  164 (165)
T ss_dssp             HTC--
T ss_pred             hhccc
Confidence            88875

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.93  E-value=2.2e-25  Score=214.63  Aligned_cols=156  Identities=24%  Similarity=0.308  Sum_probs=149.6

Q ss_pred             CcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCC
Q psy817          277 RRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNI  356 (854)
Q Consensus       277 ~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~  356 (854)
                      .|.||||.|+..|+.++++.|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||||.|+..+ 
T Consensus         2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-   80 (167)
T 3v31_A            2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKG-   80 (167)
T ss_dssp             TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT-
T ss_pred             CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC-
Confidence            3569999999999999999999999999999999999999999999999999999999999999999999999999999 


Q ss_pred             CChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHHhhhhc
Q psy817          357 LSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKL  434 (854)
Q Consensus       357 ~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~  434 (854)
                       +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|+..+..++...+...
T Consensus        81 -~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~  157 (167)
T 3v31_A           81 -YTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESH  157 (167)
T ss_dssp             -CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred             -CHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHH
Confidence             88999999999999999999999999999999999999999999999999999999999999999998887766544

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.93  E-value=1.1e-26  Score=238.04  Aligned_cols=156  Identities=24%  Similarity=0.247  Sum_probs=56.9

Q ss_pred             CCccHHHHHHHcCCHHHHHHHHhCCCCccccCCCccHHHHHHhCCCHHHHHHHHhCCCCC------CchHHHHHHHcCCH
Q psy817          150 DKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHI------HETIVHSAVSTNAV  223 (854)
Q Consensus       150 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~~~~~------~~t~L~~A~~~~~~  223 (854)
                      .|.||||.|+..|+.++++.|+++|++++.+..|.||||.|+..|+.+++++|+++|+++      |.||||.|+..|+.
T Consensus         4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~   83 (239)
T 1ycs_B            4 TGQVSLPPGKRTNLRKTGSERIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHT   83 (239)
T ss_dssp             ---------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCH
T ss_pred             cccccCchhhhhhhHHHHHHHhccCCCcccCchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCH
Confidence            455666666666666666666666665554444445555444444444444444333322      22333333333333


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHH--HHcCCHHHHHHHHhcC
Q psy817          224 DCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLA--AENGYVECLRILLENH  301 (854)
Q Consensus       224 ~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A--~~~g~~~~v~~Ll~~~  301 (854)
                      +++++|+++|+++|.+|..|.||||+|+..|+.+++++|++++ ++++..+...+.||||+|  +..|+.+++++|+++|
T Consensus        84 ~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~  162 (239)
T 1ycs_B           84 EIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESG-AAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQ  162 (239)
T ss_dssp             HHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhh
Confidence            3444444444445555555555555555555555555555543 455544443334555555  4445555555555555


Q ss_pred             CCcCC
Q psy817          302 ANCNE  306 (854)
Q Consensus       302 ~~~~~  306 (854)
                      ++++.
T Consensus       163 a~~~~  167 (239)
T 1ycs_B          163 EKMGI  167 (239)
T ss_dssp             HHTTT
T ss_pred             hcccc
Confidence            44443

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.93  E-value=2e-25  Score=217.66  Aligned_cols=166  Identities=23%  Similarity=0.283  Sum_probs=137.5

Q ss_pred             CchHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHc
Q psy817          210 HETIVHSAVSTNAVDCVQLLLSL-QINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAEN  288 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~  288 (854)
                      +.++|+.|+..|+.+++++|++. +.+++..|..|.||||+|+..|+.+++++|++++ ++++..+. .|.||||+|+..
T Consensus         5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~-~g~t~L~~A~~~   82 (179)
T 3f6q_A            5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRG-ARINVMNR-GDDTPLHLAASH   82 (179)
T ss_dssp             --CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCT-TCCCHHHHHHHT
T ss_pred             HHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCCcCC-CCCCHHHHHHHc
Confidence            45778888888888888888877 6678888888888888888888888888888876 77877653 566888888888


Q ss_pred             CCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhC
Q psy817          289 GYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKW  368 (854)
Q Consensus       289 g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~  368 (854)
                      |+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||+|.|+..+  +.+++++|+++
T Consensus        83 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~--~~~~~~~L~~~  160 (179)
T 3f6q_A           83 GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPL--RELLRERAEKM  160 (179)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHH--HHHHHHHHHHT
T ss_pred             CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHH--HHHHHHHHHHh
Confidence            8888888888888888888888888888888888888888888888888888888888888888877  67778888888


Q ss_pred             CCCCccCCCCC
Q psy817          369 GANVNARDIFG  379 (854)
Q Consensus       369 g~d~n~~d~~g  379 (854)
                      |++++..+..+
T Consensus       161 g~~~~~~~~~~  171 (179)
T 3f6q_A          161 GQNLNRIPYKD  171 (179)
T ss_dssp             TCCCSCBCCCC
T ss_pred             hcCcccCCccc
Confidence            88888766543

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.93  E-value=4.9e-25  Score=208.86  Aligned_cols=149  Identities=32%  Similarity=0.448  Sum_probs=143.7

Q ss_pred             cHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCCh
Q psy817          280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSV  359 (854)
Q Consensus       280 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~  359 (854)
                      |+|+.|+..|+.+++++|+++|++++ .+..|.||||+|+..|+.+++++|+++|++++..+..|.||||.|+..+  +.
T Consensus         4 ~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~   80 (153)
T 1awc_B            4 KKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEG--HA   80 (153)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHT--CH
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC--hH
Confidence            89999999999999999999999886 5889999999999999999999999999999999999999999999999  88


Q ss_pred             HHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHHhh
Q psy817          360 HPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVR  431 (854)
Q Consensus       360 ~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~  431 (854)
                      +++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|+..++.++..++
T Consensus        81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L  152 (153)
T 1awc_B           81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999999999999999998887664

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.93  E-value=4.4e-25  Score=209.93  Aligned_cols=154  Identities=23%  Similarity=0.304  Sum_probs=118.2

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcC
Q psy817          243 GVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQ  322 (854)
Q Consensus       243 g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~  322 (854)
                      |.||||.|+..|+.++++.|++..+.+++..+ ..|.||||+ +..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   79 (156)
T 1bd8_A            2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALN-RFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTG   79 (156)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCC-TTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             cchHHHHHHHhCCHHHHHHHHHhhCcCccccC-CCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC
Confidence            34677777777777777777776445666554 345577777 7777777777777777777777778888888888888


Q ss_pred             CHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q psy817          323 SVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMH  401 (854)
Q Consensus       323 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~  401 (854)
                      +.+++++|+++|++++..|..|.||||.|+..+  +.+++++|+++ ++++.+|..|.||||+|+..|+.+++++|+++
T Consensus        80 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  155 (156)
T 1bd8_A           80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEG--HTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHT--CHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhC--hHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence            888888888888888777778888888888877  67778888877 78888888888888888888888888888764

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.93  E-value=1.3e-27  Score=242.57  Aligned_cols=196  Identities=15%  Similarity=0.112  Sum_probs=167.8

Q ss_pred             HHHHHHCCCCCCCCC---CCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCC
Q psy817          226 VQLLLSLQINPNVLN---NKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHA  302 (854)
Q Consensus       226 v~~Ll~~g~~~~~~d---~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~  302 (854)
                      ++.|+++|++++..+   ..|.||||.|+..|+.+++++|++.+ ++++.++ ..|.||||+|+..|+.+++++|+++|+
T Consensus         1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~d-~~g~tpLh~A~~~g~~~~v~~Ll~~ga   78 (229)
T 2vge_A            1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEM-NDPSQPN-EEGITALHNAICGANYSIVDFLITAGA   78 (229)
T ss_dssp             ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHS-SCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcC-CCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence            467888888887655   45667899999999999999999987 8888875 457799999999999999999999999


Q ss_pred             CcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCcc-CCCCcHHHHH--HhcCCCChHHHHHHHhCCCCCccCCCCC
Q psy817          303 NCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASD-CDNRTPLHAS--LSKNILSVHPLEILLKWGANVNARDIFG  379 (854)
Q Consensus       303 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~a--~~~~~~~~~~v~~Ll~~g~d~n~~d~~g  379 (854)
                      +++.+|..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||.|  +..+  +.+++++|+++|++++..|..|
T Consensus        79 ~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~--~~~~v~~Ll~~ga~~~~~~~~~  156 (229)
T 2vge_A           79 NVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREG--YADCATYLADVEQSMGLMNSGA  156 (229)
T ss_dssp             CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTT--HHHHHHHHHHHHHHTTTSGGGE
T ss_pred             CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcC--hHHHHHHHHHcCCCcccccCCc
Confidence            999999999999999999999999999999999999986 6999999999  7777  8899999999999999999999


Q ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCC--ccccCCCCCCHHHHHHhcCCcchH
Q psy817          380 YSPIHIAALSELSQCVDCLIMHGAD--ISSKTPSGSSALSIIMRNTPSSIS  428 (854)
Q Consensus       380 ~t~L~~A~~~~~~~~v~~Ll~~ga~--~~~~~~~g~t~l~~a~~~~~~~~~  428 (854)
                      .||++.++..+.   .++|+++|++  ++.+|..|.|||++|+..++.+++
T Consensus       157 ~~~l~~~~~~~~---~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v  204 (229)
T 2vge_A          157 VYALWDYSAEFG---DELSFREGESVTVLRRDGPEETDWWWAALHGQEGYV  204 (229)
T ss_dssp             EEESSCBCCSST---TBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEE
T ss_pred             hHHHHHHhhccc---cccCccccccccccccCCCcccHHHHHHHcCCccee
Confidence            999986555443   3678899998  678899999999999999887764

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.92  E-value=2.5e-26  Score=235.38  Aligned_cols=179  Identities=20%  Similarity=0.186  Sum_probs=122.9

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHh
Q psy817          241 NKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAK  320 (854)
Q Consensus       241 ~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~  320 (854)
                      ..|.||||.|+..|+.++++.|+++| ++++..  ..|.||||.|+..|+.++++.|+++|++++.+|..|.||||+|+.
T Consensus         3 ~~g~t~L~~a~~~~~~~~~~~ll~~g-~~~~~~--~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~   79 (239)
T 1ycs_B            3 ITGQVSLPPGKRTNLRKTGSERIAHG-MRVKFN--PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVC   79 (239)
T ss_dssp             -------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHH
T ss_pred             ccccccCchhhhhhhHHHHHHHhccC-CCcccC--chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence            35788888888888888888888876 677653  456689999999999999999999998988889999999999999


Q ss_pred             cCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCC-CHHHHH--HHcCCHHHHHH
Q psy817          321 CQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGY-SPIHIA--ALSELSQCVDC  397 (854)
Q Consensus       321 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~-t~L~~A--~~~~~~~~v~~  397 (854)
                      .|+.+++++|+++|++++..|..|+||||.|+..+  +.+++++|+++|++++..+..|. ||||+|  +..|+.+++++
T Consensus        80 ~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~--~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~  157 (239)
T 1ycs_B           80 AGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCN--NVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQF  157 (239)
T ss_dssp             HTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTT--CHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHH
T ss_pred             cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC--CHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHH
Confidence            99999999999999999988999999999999888  77889999999999998888777 999988  77888999999


Q ss_pred             HHHcCCCcccc---------CCCCCCHHHHHHhcCC
Q psy817          398 LIMHGADISSK---------TPSGSSALSIIMRNTP  424 (854)
Q Consensus       398 Ll~~ga~~~~~---------~~~g~t~l~~a~~~~~  424 (854)
                      |+++|++++..         +..+.++.+++.+.+.
T Consensus       158 Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~  193 (239)
T 1ycs_B          158 LYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD  193 (239)
T ss_dssp             HHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred             HHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence            99999887766         4445666665555443

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.92  E-value=1.8e-24  Score=207.86  Aligned_cols=156  Identities=26%  Similarity=0.336  Sum_probs=101.1

Q ss_pred             CchHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHc
Q psy817          210 HETIVHSAVSTNAVDCVQLLLSL-QINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAEN  288 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~  288 (854)
                      +.|+|+.|+..|+.++++.|++. +.+++..+..|.||||+|+..|+.+++++|++++ ++++.++. .|.||||+|+..
T Consensus         8 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~-~g~t~L~~A~~~   85 (165)
T 3twr_A            8 ADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHG-ADVHAKDK-GGLVPLHNACSY   85 (165)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCT-TSCCHHHHHHHT
T ss_pred             hhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcC-CCCCccCC-CCCCHHHHHHHc
Confidence            34555666666666666666553 4455666666667777777777777777777664 66665543 455777777777


Q ss_pred             CCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhC
Q psy817          289 GYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKW  368 (854)
Q Consensus       289 g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~  368 (854)
                      |+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||+|.|+. +  +.+++++|+++
T Consensus        86 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~--~~~i~~~L~~~  162 (165)
T 3twr_A           86 GHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-G--DTDIQDLLRGD  162 (165)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-T--CHHHHHHHHTC
T ss_pred             CcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-C--ChHHHHHHhhc
Confidence            77777777777777777677777777777777777777777777777777777777777776554 4  45667777666


Q ss_pred             CC
Q psy817          369 GA  370 (854)
Q Consensus       369 g~  370 (854)
                      |+
T Consensus       163 gA  164 (165)
T 3twr_A          163 AA  164 (165)
T ss_dssp             --
T ss_pred             cc
Confidence            53

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.92  E-value=5e-24  Score=202.62  Aligned_cols=152  Identities=24%  Similarity=0.389  Sum_probs=125.3

Q ss_pred             chHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcC
Q psy817          211 ETIVHSAVSTNAVDCVQLLLSL-QINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENG  289 (854)
Q Consensus       211 ~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g  289 (854)
                      .|+||.|+..|+.+++++|++. +.+++..|..|.||||+ +..|+.+++++|++++ ++++.++ ..|.||||+|+..|
T Consensus         3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g-~~~~~~~-~~g~t~L~~A~~~~   79 (156)
T 1bd8_A            3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQG-ASPNVQD-TSGTSPVHDAARTG   79 (156)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTT-CCTTCCC-TTSCCHHHHHHHTT
T ss_pred             chHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCC-CCCCCcC-CCCCCHHHHHHHcC
Confidence            5778888888888888888877 45788888888888888 8888888888888875 7777765 45668888888888


Q ss_pred             CHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhC
Q psy817          290 YVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKW  368 (854)
Q Consensus       290 ~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~  368 (854)
                      +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++ ++++..|..|.||||.|+..+  +.+++++|+++
T Consensus        80 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~--~~~~v~~Ll~~  155 (156)
T 1bd8_A           80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRG--AQDLVDILQGH  155 (156)
T ss_dssp             CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSC--CHHHHHHHHTT
T ss_pred             cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcC--cHHHHHHHHhh
Confidence            88888888888888888888888888888888888888888888 888888888888888888888  77778888764

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.91  E-value=7.2e-25  Score=214.04  Aligned_cols=164  Identities=12%  Similarity=0.110  Sum_probs=142.0

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCH----HHHHHHHhcCCCcCCCCCCCCCHHHHH
Q psy817          243 GVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYV----ECLRILLENHANCNERNHKEQIPLHLA  318 (854)
Q Consensus       243 g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~----~~v~~Ll~~~~~~~~~~~~g~t~L~~A  318 (854)
                      +.++|+.|+..|+.+.++.++..+   ++..++..|.||||+|+.+|+.    +++++|+++|++++.+|..|+||||+|
T Consensus         6 ~~~~l~~Aa~~g~~~~~~~l~~~~---~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a   82 (186)
T 3t8k_A            6 EYRTVSAAAMLGTYEDFLELFEKG---YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPL   82 (186)
T ss_dssp             HCSSHHHHHHHSCHHHHHHHHHHS---SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHH
T ss_pred             cccHHHHHHHcCCHHHHHHHHhcC---cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence            457899999999999999998865   4444445678999999999975    489999999999999999999999999


Q ss_pred             HhcCC------HHHHHHHHhCCCCCCCccCCCC-cHHHHHHhcCCC---ChHHHHHHHh-CCCCCccCCCCCCCHHHHHH
Q psy817          319 AKCQS------VECMEMLLRKGSQVNASDCDNR-TPLHASLSKNIL---SVHPLEILLK-WGANVNARDIFGYSPIHIAA  387 (854)
Q Consensus       319 ~~~~~------~~~v~~Ll~~g~~~~~~~~~g~-t~L~~a~~~~~~---~~~~v~~Ll~-~g~d~n~~d~~g~t~L~~A~  387 (854)
                      +..|+      .+++++|+++|+++|.+|..|+ ||||+|+..+..   ..+++++|++ +|+|++.+|..|.||||+|+
T Consensus        83 ~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~  162 (186)
T 3t8k_A           83 FQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVK  162 (186)
T ss_dssp             HHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHH
T ss_pred             HHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHH
Confidence            99887      6889999999999999999999 999999985532   2468999999 99999999999999999999


Q ss_pred             HcCCHHHHHHHHHcCCCccccC
Q psy817          388 LSELSQCVDCLIMHGADISSKT  409 (854)
Q Consensus       388 ~~~~~~~v~~Ll~~ga~~~~~~  409 (854)
                      ..|+.+++++|.++..+.+.++
T Consensus       163 ~~~~~~~v~~L~~~~~~~~~~~  184 (186)
T 3t8k_A          163 RCQKPIALKMMEDYIKKYNLKE  184 (186)
T ss_dssp             TTTCHHHHHHHHHHHHHHTCCC
T ss_pred             HcCCHHHHHHHHHHHHHHhccc
Confidence            9999999999998776655554

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.90  E-value=9e-24  Score=195.65  Aligned_cols=134  Identities=25%  Similarity=0.321  Sum_probs=116.8

Q ss_pred             CCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCC-CC
Q psy817          267 MADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCD-NR  345 (854)
Q Consensus       267 ~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~  345 (854)
                      +++++..+. .|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+. |+.+++++|+++|++++..|.. |.
T Consensus         2 ~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~   79 (136)
T 1d9s_A            2 SPGIHMLGG-SSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLT   79 (136)
T ss_dssp             CCCCSCCCC-CCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTB
T ss_pred             CCCccCCCC-CCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCC
Confidence            456666653 55688888888888888888888888888888889999999998 9999999999999999888888 89


Q ss_pred             cHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy817          346 TPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD  404 (854)
Q Consensus       346 t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~  404 (854)
                      ||||+|+..+  +.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|+|
T Consensus        80 t~L~~A~~~~--~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad  136 (136)
T 1d9s_A           80 RPVHDAAREG--FLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD  136 (136)
T ss_dssp             CHHHHHHHHT--CHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred             CHHHHHHHcC--CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            9999999988  77889999999999999999999999999999999999999999886

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.90  E-value=4.8e-24  Score=202.68  Aligned_cols=141  Identities=26%  Similarity=0.306  Sum_probs=115.9

Q ss_pred             CCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCc-HHHHHHhc
Q psy817          276 ERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRT-PLHASLSK  354 (854)
Q Consensus       276 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-~L~~a~~~  354 (854)
                      ..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+ .|+.+++++|+++|++++..|..|.| |||.|+..
T Consensus        10 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~   88 (156)
T 1bi7_B           10 EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAARE   88 (156)
T ss_dssp             CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHH
T ss_pred             ccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHC
Confidence            45679999999999999999999999999999999999999985 89999999999999999999999999 99999999


Q ss_pred             CCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHH
Q psy817          355 NILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSII  419 (854)
Q Consensus       355 ~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a  419 (854)
                      +  +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.||.+.+
T Consensus        89 ~--~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~  151 (156)
T 1bi7_B           89 G--FLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP  151 (156)
T ss_dssp             T--CHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred             C--CHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence            9  78889999999999999999999999999999999999999999999999999999887643

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.88  E-value=3.9e-23  Score=196.32  Aligned_cols=137  Identities=21%  Similarity=0.299  Sum_probs=81.2

Q ss_pred             CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCc-HHHHHHHc
Q psy817          210 HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVT-ALHLAAEN  288 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t-~L~~A~~~  288 (854)
                      |.||||.|+..|+.+++++|+++|++++..|..|.||||+|+ .|+.+++++|++++ ++++.++.. |.| |||+|+..
T Consensus        12 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g-~~~~~~d~~-g~ttpL~~A~~~   88 (156)
T 1bi7_B           12 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHG-AEPNCADPA-TLTRPVHDAARE   88 (156)
T ss_dssp             STTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTT-CCCCCCCTT-TCCCHHHHHHHH
T ss_pred             chHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcC-CCCCCcCCC-CCcHHHHHHHHC
Confidence            556666666666666666666666666666666777776664 66677777776664 666655533 335 77777777


Q ss_pred             CCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHH
Q psy817          289 GYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLH  349 (854)
Q Consensus       289 g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~  349 (854)
                      |+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||.+
T Consensus        89 ~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~  149 (156)
T 1bi7_B           89 GFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE  149 (156)
T ss_dssp             TCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred             CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence            7777777777666666666666677777777667777777776666666666666666655

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.88  E-value=9.3e-23  Score=188.78  Aligned_cols=134  Identities=19%  Similarity=0.244  Sum_probs=108.4

Q ss_pred             CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCC-C
Q psy817          233 QINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHK-E  311 (854)
Q Consensus       233 g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-g  311 (854)
                      +++++..|..|.||||.|+..|+.+++++|++++ ++++.++ ..|.||||+|+. |+.+++++|+++|++++.+|.. |
T Consensus         2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~-~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g   78 (136)
T 1d9s_A            2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAG-ADPNALN-RFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATL   78 (136)
T ss_dssp             CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTT-CCTTCCC-TTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTT
T ss_pred             CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcC-CCcCCcC-CCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCC
Confidence            4677778888888888888888888888888875 7777665 456688888888 8888888888888888888888 8


Q ss_pred             CCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCC
Q psy817          312 QIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGAN  371 (854)
Q Consensus       312 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d  371 (854)
                      .||||+|+..|+.+++++|+++|++++..|..|.||||.|+..+  +.+++++|+++|+|
T Consensus        79 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~--~~~~~~~Ll~~Gad  136 (136)
T 1d9s_A           79 TRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQG--HRDIARYLHAATGD  136 (136)
T ss_dssp             BCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHT--CHHHHHHHHHHHCC
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC--CHHHHHHHHHcCCC
Confidence            88888888888888888888888888888888888888888887  67778888887765

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.88  E-value=2.9e-23  Score=202.59  Aligned_cols=159  Identities=13%  Similarity=0.097  Sum_probs=101.0

Q ss_pred             CccHHHHHHHcCCHHHHHHHHhCCCCccccCCCccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHH
Q psy817          151 KYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLL  230 (854)
Q Consensus       151 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll  230 (854)
                      +.++|+.|++.|+.+.++.+++.+.+...+..|.||||+|+.+|+.+.                       +.+++++|+
T Consensus         6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~~~~~~g~T~Lh~A~~~~~~~~-----------------------~~~iv~~Ll   62 (186)
T 3t8k_A            6 EYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEA-----------------------RYKISMFLI   62 (186)
T ss_dssp             HCSSHHHHHHHSCHHHHHHHHHHSSSCHHHHHTTTHHHHHTTCSCHHH-----------------------HHHHHHHHH
T ss_pred             cccHHHHHHHcCCHHHHHHHHhcCcccccccCCCCHHHHHHHcCCcch-----------------------HHHHHHHHH
Confidence            456677777777777777766665432211235556655555543220                       235677777


Q ss_pred             HCCCCCCCCCCCCCcHHHHHHHcCC------HHHHHHHHHcCCCCccccccCCcC-cHHHHHHHcCC-----HHHHHHHH
Q psy817          231 SLQINPNVLNNKGVSPLHIAADRGL------ISCLKAILDSGMADVDIKTKERRV-TALHLAAENGY-----VECLRILL  298 (854)
Q Consensus       231 ~~g~~~~~~d~~g~t~L~~A~~~g~------~~iv~~Ll~~~~~~~~~~~~~~~~-t~L~~A~~~g~-----~~~v~~Ll  298 (854)
                      ++|+|+|.+|..|+||||+|+..|+      .+++++|+++| +++|.++. .|. ||||+|+..+.     .+++++|+
T Consensus        63 ~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~G-adin~~d~-~g~ttpLh~A~~~~~~~~~~~~iv~~Ll  140 (186)
T 3t8k_A           63 NKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKG-ADITALYK-PYKIVVFKNIFNYFVDENEMIPLYKLIF  140 (186)
T ss_dssp             HTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTT-CCSSSCBG-GGTBCTTGGGGGCCSCHHHHHHHHHHHH
T ss_pred             HCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCC-CCCCccCC-CcCchHHHHHHHcCCChhhHHHHHHHHH
Confidence            7788888888888888888888776      45666666664 66666553 334 66666666332     34666666


Q ss_pred             h-cCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCC
Q psy817          299 E-NHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKG  334 (854)
Q Consensus       299 ~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g  334 (854)
                      + +|++++.+|..|.||||+|+..|+.+++++|.+..
T Consensus       141 ~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~  177 (186)
T 3t8k_A          141 SQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYI  177 (186)
T ss_dssp             TSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHH
T ss_pred             HhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHH
Confidence            6 66666666666666666666666666666666543

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.88  E-value=4.1e-22  Score=181.56  Aligned_cols=125  Identities=40%  Similarity=0.614  Sum_probs=116.6

Q ss_pred             cCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCC
Q psy817          278 RVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNIL  357 (854)
Q Consensus       278 ~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~  357 (854)
                      |.||||.|+..|+.+++++|+++|++++..+..|.||||.|+..|+.+++++|+++|++++..|..|.||||.|+..+  
T Consensus         2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~--   79 (126)
T 1n0r_A            2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG--   79 (126)
T ss_dssp             CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT--
T ss_pred             CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC--
Confidence            569999999999999999999999999999999999999999999999999999999999999999999999999998  


Q ss_pred             ChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy817          358 SVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD  404 (854)
Q Consensus       358 ~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~  404 (854)
                      +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+|
T Consensus        80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad  126 (126)
T 1n0r_A           80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY  126 (126)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred             hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence            78889999999999999999999999999999999999999999986

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.88  E-value=2.9e-22  Score=185.41  Aligned_cols=125  Identities=33%  Similarity=0.393  Sum_probs=117.9

Q ss_pred             CCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcC
Q psy817          276 ERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKN  355 (854)
Q Consensus       276 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~  355 (854)
                      ..+.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||.|+..+
T Consensus        12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~   91 (136)
T 2jab_A           12 SDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIG   91 (136)
T ss_dssp             CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred             ccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence            44669999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q psy817          356 ILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHG  402 (854)
Q Consensus       356 ~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g  402 (854)
                        +.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|
T Consensus        92 --~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G  136 (136)
T 2jab_A           92 --HLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN  136 (136)
T ss_dssp             --CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred             --CHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence              788999999999999999999999999999999999999999986

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.86  E-value=2.1e-21  Score=179.68  Aligned_cols=123  Identities=24%  Similarity=0.335  Sum_probs=104.2

Q ss_pred             CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcC
Q psy817          210 HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENG  289 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g  289 (854)
                      +.||||.|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++++ ++++.++. .|.||||+|+..|
T Consensus        14 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~-~g~t~L~~A~~~~   91 (136)
T 2jab_A           14 LGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNG-ADVNAVDA-IGFTPLHLAAFIG   91 (136)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCT-TCCCHHHHHHHHT
T ss_pred             ccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCC-CCCCHHHHHHHcC
Confidence            567888888888888888888888888888888889999998888888888888875 77877654 5668888888888


Q ss_pred             CHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCC
Q psy817          290 YVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKG  334 (854)
Q Consensus       290 ~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g  334 (854)
                      +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus        92 ~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G  136 (136)
T 2jab_A           92 HLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN  136 (136)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred             CHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence            888888888888888888888888888888888888888888875

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.86  E-value=4e-21  Score=174.94  Aligned_cols=125  Identities=37%  Similarity=0.598  Sum_probs=96.3

Q ss_pred             CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcC
Q psy817          210 HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENG  289 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g  289 (854)
                      |.||||.|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++++ ++++.++ ..|.||||+|+..|
T Consensus         2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~-~~g~t~l~~A~~~~   79 (126)
T 1n0r_A            2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKD-KNGRTPLHLAARNG   79 (126)
T ss_dssp             CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCC-TTSCCHHHHHHHTT
T ss_pred             CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcC-CCCcccC-CCCCcHHHHHHHcC
Confidence            567777777777777777777777777777778888888888888888888888765 6666654 34567888888888


Q ss_pred             CHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCC
Q psy817          290 YVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQ  336 (854)
Q Consensus       290 ~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~  336 (854)
                      +.+++++|+++|++++.+|..|.|||++|+..|+.+++++|+++|+|
T Consensus        80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad  126 (126)
T 1n0r_A           80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY  126 (126)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred             hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence            88888888888888777777788888888888888888888877764

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.84  E-value=2e-22  Score=197.09  Aligned_cols=140  Identities=24%  Similarity=0.268  Sum_probs=110.1

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCC-CCCCCHHHHH
Q psy817          240 NNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERN-HKEQIPLHLA  318 (854)
Q Consensus       240 d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~A  318 (854)
                      +..|.||||.|+..|+.++++.|++  +++++.++ ..|.||||+|+..|+.+++++|+++|++++.++ ..|.||||+|
T Consensus        41 ~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A  117 (183)
T 3deo_A           41 VSEYETPWWTAARKADEQALSQLLE--DRDVDAVD-ENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMA  117 (183)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHTT--TSCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHH
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHh--cCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHH
Confidence            3467778888888888888888887  36777665 356688888888888888888888888887777 7788888888


Q ss_pred             HhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHH
Q psy817          319 AKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCL  398 (854)
Q Consensus       319 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~L  398 (854)
                      +..|+.+++++|+++|++++..|..|.||||+|+..++.                   ..+.+||++|+..|+.+++++|
T Consensus       118 ~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-------------------~~~~~~l~~a~~~~~~~i~~~L  178 (183)
T 3deo_A          118 AGYVRPEVVEALVELGADIEVEDERGLTALELAREILKT-------------------TPKGNPMQFGRRIGLEKVINVL  178 (183)
T ss_dssp             HHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-------------------CCCCSHHHHHHHHHHHHHHHHH
T ss_pred             HhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-------------------cccccHHHHHHHcCHHHHHHHH
Confidence            888888888888888888888888888888888776521                   3467899999999999999988


Q ss_pred             HHc
Q psy817          399 IMH  401 (854)
Q Consensus       399 l~~  401 (854)
                      .++
T Consensus       179 ~~~  181 (183)
T 3deo_A          179 EGQ  181 (183)
T ss_dssp             HTC
T ss_pred             HHh
Confidence            765

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.84  E-value=1.6e-21  Score=180.70  Aligned_cols=121  Identities=28%  Similarity=0.440  Sum_probs=55.7

Q ss_pred             cCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCC
Q psy817          278 RVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNIL  357 (854)
Q Consensus       278 ~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~  357 (854)
                      |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||.|+..+  
T Consensus        10 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--   87 (137)
T 3c5r_A           10 GETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNG--   87 (137)
T ss_dssp             CCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTT--
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcC--
Confidence            334444444444444444444444444444444444444444444444444444444444444444444444444444  


Q ss_pred             ChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q psy817          358 SVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIM  400 (854)
Q Consensus       358 ~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~  400 (854)
                      +.+++++|+++|++++.+|..|.||||+|+..+..+++++|.+
T Consensus        88 ~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~  130 (137)
T 3c5r_A           88 HVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEK  130 (137)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred             CHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccc
Confidence            3444444444444444444444444444444444444444433

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.84  E-value=1.9e-22  Score=206.96  Aligned_cols=141  Identities=24%  Similarity=0.258  Sum_probs=84.3

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCC-CCCCCHHHHHHhc
Q psy817          243 GVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERN-HKEQIPLHLAAKC  321 (854)
Q Consensus       243 g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~A~~~  321 (854)
                      |.||||.|+..|+.++++.|++  +++++.++ ..|.||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+..
T Consensus        45 g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~  121 (244)
T 3ui2_A           45 YETPWWTAARKADEQALSQLLE--DRDVDAVD-ENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY  121 (244)
T ss_dssp             HHHHHHHHHTTTCHHHHHHTTT--TCCTTCBC-TTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred             CCCHHHHHHHcCCHHHHHHHHc--CCCCCCcC-CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence            4444444444444444444444  23444433 233455555555555555555555555555555 4566666666666


Q ss_pred             CCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q psy817          322 QSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMH  401 (854)
Q Consensus       322 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~  401 (854)
                      |+.+++++|+++|++++..|..|.||||+|+..+..                   ..+.||||+|+..|+.+++++|+++
T Consensus       122 g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~-------------------~~~~~~l~~a~~~g~~~iv~~L~~~  182 (244)
T 3ui2_A          122 VRPEVVEALVELGADIEVEDERGLTALELAREILKT-------------------TPKGNPMQFGRRIGLEKVINVLEGQ  182 (244)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTT-------------------CCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhc-------------------cCCCCHHHHHHHcChHHHHHHHHHh
Confidence            666666666666666666666666666666554321                   2467999999999999999999998


Q ss_pred             CCCc
Q psy817          402 GADI  405 (854)
Q Consensus       402 ga~~  405 (854)
                      +.+.
T Consensus       183 ~~~~  186 (244)
T 3ui2_A          183 VFEY  186 (244)
T ss_dssp             HEEE
T ss_pred             cccc
Confidence            6654

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.84  E-value=3.8e-21  Score=178.18  Aligned_cols=126  Identities=26%  Similarity=0.295  Sum_probs=115.9

Q ss_pred             CCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCC
Q psy817          301 HANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGY  380 (854)
Q Consensus       301 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~  380 (854)
                      |+|+ .+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||.|+..+  +.+++++|+++|++++.+|..|.
T Consensus         1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~~~~Ll~~g~~~~~~~~~g~   77 (137)
T 3c5r_A            1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHG--HLKVVELLLQHKALVNTTGYQND   77 (137)
T ss_dssp             ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTT--CHHHHHHHHHTTCCTTCCCGGGC
T ss_pred             CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC--CHHHHHHHHHcCCcccCcCCCCC
Confidence            5677 78899999999999999999999999999999999999999999999999  88999999999999999999999


Q ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHH
Q psy817          381 SPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISS  429 (854)
Q Consensus       381 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~  429 (854)
                      ||||+|+..|+.+++++|+++|++++.+|..|.||+++|...+..++..
T Consensus        78 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~  126 (137)
T 3c5r_A           78 SPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLL  126 (137)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHS
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHh
Confidence            9999999999999999999999999999999999999997665554433

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.83  E-value=3.7e-20  Score=195.54  Aligned_cols=137  Identities=23%  Similarity=0.241  Sum_probs=100.7

Q ss_pred             cHHHHHHHcCCHHHHHHHHhcCCCcCC------CCCCCCCHHHHHHhc---CCHHHHHHHHhCCCCCCCccCCCCcHHHH
Q psy817          280 TALHLAAENGYVECLRILLENHANCNE------RNHKEQIPLHLAAKC---QSVECMEMLLRKGSQVNASDCDNRTPLHA  350 (854)
Q Consensus       280 t~L~~A~~~g~~~~v~~Ll~~~~~~~~------~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~  350 (854)
                      ++|+.|+..|+.+.++.|++.|++++.      .+..|.||||+|+..   |+.+++++|+++|+++|..|..|+||||+
T Consensus       153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~  232 (301)
T 2b0o_E          153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY  232 (301)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHH
T ss_pred             HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHH
Confidence            567777777777777777777777766      577777788877775   77778888887777777777777888888


Q ss_pred             HHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCC
Q psy817          351 SLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTP  424 (854)
Q Consensus       351 a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~  424 (854)
                      |+..|  +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++      .|.|||++|+..+.
T Consensus       233 A~~~g--~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~  298 (301)
T 2b0o_E          233 AALYN--QPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVI  298 (301)
T ss_dssp             HHHTT--CHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC-------
T ss_pred             HHHcC--CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCC
Confidence            87777  66777888888888888887888888888888888888888877765      46778877776554

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.83  E-value=2.1e-20  Score=182.61  Aligned_cols=138  Identities=21%  Similarity=0.263  Sum_probs=117.9

Q ss_pred             CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcC
Q psy817          210 HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENG  289 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g  289 (854)
                      |.||||.|+..|+.++++.|++ |+++|..|..|.||||+|+..|+.+++++|++++ ++++.+++..|.||||+|+..|
T Consensus        44 g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~~g~tpL~~A~~~~  121 (183)
T 3deo_A           44 YETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAG-ADLDHRDMRGGLTALHMAAGYV  121 (183)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCSSSSCCHHHHHHHTT
T ss_pred             CCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCCHHHHHHhcC
Confidence            5678888888888888888888 8889999999999999999999999999999986 8888887677889999999999


Q ss_pred             CHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhC
Q psy817          290 YVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKW  368 (854)
Q Consensus       290 ~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~  368 (854)
                      +.+++++|+++|++++.+|..|.||||+|+..++.                 ..+.++|++|+..|  ..+++++|.++
T Consensus       122 ~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~--~~~i~~~L~~~  181 (183)
T 3deo_A          122 RPEVVEALVELGADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIG--LEKVINVLEGQ  181 (183)
T ss_dssp             CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHH--HHHHHHHHHTC
T ss_pred             cHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcC--HHHHHHHHHHh
Confidence            99999999999999999999999999999874322                 34578999999988  67778888764

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.83  E-value=1.2e-20  Score=193.43  Aligned_cols=139  Identities=21%  Similarity=0.253  Sum_probs=78.7

Q ss_pred             CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcC
Q psy817          210 HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENG  289 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g  289 (854)
                      |.||||.|+..|+.++++.|++ |+++|..|..|.||||+|+..|+.+++++|++++ ++++.+++..|.||||+|+..|
T Consensus        45 g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~g~t~L~~A~~~g  122 (244)
T 3ui2_A           45 YETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAG-ADLDHRDMRGGLTALHMAAGYV  122 (244)
T ss_dssp             HHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT-CCTTCCCSSSCCCHHHHHHHTT
T ss_pred             CCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCcCCCCCCCCHHHHHHHcC
Confidence            4556666666666666666655 5555555555666666666666666666666554 5555554444556666666666


Q ss_pred             CHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCC
Q psy817          290 YVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWG  369 (854)
Q Consensus       290 ~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g  369 (854)
                      +.+++++|+++|++++.+|..|.||||+|+..++                 ...+.||||+|+..|  ..+++++|.+++
T Consensus       123 ~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g--~~~iv~~L~~~~  183 (244)
T 3ui2_A          123 RPEVVEALVELGADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIG--LEKVINVLEGQV  183 (244)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHH--HHHHHHHHHHHH
T ss_pred             CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcC--hHHHHHHHHHhc
Confidence            6666666666666665556666666665553111                 133455666665555  444555555543

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.82  E-value=8.6e-21  Score=191.80  Aligned_cols=135  Identities=22%  Similarity=0.208  Sum_probs=111.6

Q ss_pred             CCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhC-CCCCCCccCCCCcHHHHHHhc
Q psy817          276 ERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRK-GSQVNASDCDNRTPLHASLSK  354 (854)
Q Consensus       276 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~a~~~  354 (854)
                      ..|.||||+|+..|+.++++.|+++|++++.+|..|.||||+|+..|+.+++++|+++ |++++..|..|+||||+|+..
T Consensus        71 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~  150 (222)
T 3ehr_A           71 ESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWK  150 (222)
T ss_dssp             EEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHH
T ss_pred             cccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHc
Confidence            3466999999999999999999999999999999999999999999999999999998 999999999999999999999


Q ss_pred             CCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCC
Q psy817          355 NILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSG  412 (854)
Q Consensus       355 ~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g  412 (854)
                      |  +.+++++|+++|++++.+|..|.||||+|+..++.++++.|+++|++...++..|
T Consensus       151 ~--~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~  206 (222)
T 3ehr_A          151 G--YADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAED  206 (222)
T ss_dssp             T--CHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------------
T ss_pred             C--CHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhh
Confidence            9  7888999999999999999999999999999999999999999999887776554

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.82  E-value=2.1e-20  Score=169.49  Aligned_cols=107  Identities=26%  Similarity=0.392  Sum_probs=71.6

Q ss_pred             cCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCC
Q psy817          278 RVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNIL  357 (854)
Q Consensus       278 ~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~  357 (854)
                      |.||||.|+..|+.++++.|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|+||||.|+..+  
T Consensus         7 ~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~--   84 (123)
T 3aaa_C            7 CDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEG--   84 (123)
T ss_dssp             CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHT--
T ss_pred             cchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC--
Confidence            346666666666666666666666666666666666666666666666666666666666666666666666666666  


Q ss_pred             ChHHHHHHHhCCCCCccCCCCCCCHHHHH
Q psy817          358 SVHPLEILLKWGANVNARDIFGYSPIHIA  386 (854)
Q Consensus       358 ~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A  386 (854)
                      +.+++++|+++|++++.+|..|.||||+|
T Consensus        85 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A  113 (123)
T 3aaa_C           85 HVSCVKLLLSKGADKTVKGPDGLTAFEAT  113 (123)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHC
T ss_pred             CHHHHHHHHHcCCCCCCcCCCCCCHHHHh
Confidence            55666666666666666666666666666

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.81  E-value=4.2e-20  Score=195.11  Aligned_cols=137  Identities=23%  Similarity=0.271  Sum_probs=89.5

Q ss_pred             chHHHHHHHcCCHHHHHHHHHCCCCCCC------CCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCccccccCCcCcH
Q psy817          211 ETIVHSAVSTNAVDCVQLLLSLQINPNV------LNNKGVSPLHIAADR---GLISCLKAILDSGMADVDIKTKERRVTA  281 (854)
Q Consensus       211 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~d~~g~t~L~~A~~~---g~~~iv~~Ll~~~~~~~~~~~~~~~~t~  281 (854)
                      .++|+.|+..|+.+.++.|++.|++++.      .+..|.||||+|+..   |+.+++++|++++ ++++.++ ..|.||
T Consensus       152 ~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g-advn~~d-~~G~Tp  229 (301)
T 2b0o_E          152 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDAKA-ADGNTA  229 (301)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHS-SCTTCCC-TTCCCH
T ss_pred             HHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcC-CCCCCCC-CCCCCH
Confidence            4567777777777777777777777776      466677777777765   6677777777664 6666654 445577


Q ss_pred             HHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcC
Q psy817          282 LHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKN  355 (854)
Q Consensus       282 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~  355 (854)
                      ||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+.+++++|+++|++      .|.||||+|+..|
T Consensus       230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g  297 (301)
T 2b0o_E          230 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWV  297 (301)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC------
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcC
Confidence            7777777777777777777777766677777777777777777777777666554      3566666666655

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.81  E-value=4.5e-20  Score=186.50  Aligned_cols=135  Identities=18%  Similarity=0.268  Sum_probs=108.5

Q ss_pred             CCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHc
Q psy817          209 IHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAEN  288 (854)
Q Consensus       209 ~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~  288 (854)
                      .|.||||.|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++++++++.++ ..|.||||+|+..
T Consensus        72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d-~~g~tpL~~A~~~  150 (222)
T 3ehr_A           72 SIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQN-KLGDTALHAAAWK  150 (222)
T ss_dssp             EESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCC-TTSCCHHHHHHHH
T ss_pred             ccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccC-CCCCCHHHHHHHc
Confidence            368899999999999999999999999999999999999999999999999999998568888876 4566999999999


Q ss_pred             CCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCC
Q psy817          289 GYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN  344 (854)
Q Consensus       289 g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g  344 (854)
                      |+.+++++|+++|++++.+|..|.|||++|+..|+.++++.|++.|+..+..+..+
T Consensus       151 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~  206 (222)
T 3ehr_A          151 GYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAED  206 (222)
T ss_dssp             TCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------------
T ss_pred             CCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhh
Confidence            99999999999999999999999999999999999999999999988776555443

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.81  E-value=1.9e-19  Score=163.15  Aligned_cols=112  Identities=28%  Similarity=0.340  Sum_probs=105.5

Q ss_pred             CCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHH
Q psy817          307 RNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIA  386 (854)
Q Consensus       307 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A  386 (854)
                      .+..|.||||.|+..|+.++++.|+++|++++..|..|+||||.|+..+  +.+++++|+++|++++.+|..|+||||+|
T Consensus         3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A   80 (123)
T 3aaa_C            3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCG--QLEILEFLLLKGADINAPDKHHITPLLSA   80 (123)
T ss_dssp             ----CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTT--CHHHHHHHHTTTCCTTCCCTTSCCHHHHH
T ss_pred             cccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCCcCCCCCCCHHHHH
Confidence            3567889999999999999999999999999999999999999999999  78999999999999999999999999999


Q ss_pred             HHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Q psy817          387 ALSELSQCVDCLIMHGADISSKTPSGSSALSIIM  420 (854)
Q Consensus       387 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~  420 (854)
                      +..|+.+++++|+++|++++.+|..|.||+++|.
T Consensus        81 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~  114 (123)
T 3aaa_C           81 VYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATD  114 (123)
T ss_dssp             HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCC
T ss_pred             HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhC
Confidence            9999999999999999999999999999999984

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.80  E-value=4.7e-19  Score=184.87  Aligned_cols=125  Identities=18%  Similarity=0.255  Sum_probs=112.7

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhcCCCc------CCCCCCCCCHHHHHHhc---CCHHHHHHHHhCCCCCCCccCCCCcHHH
Q psy817          279 VTALHLAAENGYVECLRILLENHANC------NERNHKEQIPLHLAAKC---QSVECMEMLLRKGSQVNASDCDNRTPLH  349 (854)
Q Consensus       279 ~t~L~~A~~~g~~~~v~~Ll~~~~~~------~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~  349 (854)
                      .++|+.|+..|+.+.++.+++.|+++      +..+..|.||||+|+..   |+.+++++|+++|+++|..|..|+||||
T Consensus       131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh  210 (278)
T 1dcq_A          131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALH  210 (278)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHH
T ss_pred             hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHH
Confidence            36888899999999999999888884      44578899999999998   8999999999999999999999999999


Q ss_pred             HHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Q psy817          350 ASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADI  405 (854)
Q Consensus       350 ~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~  405 (854)
                      +|+..|  +.+++++|+++|+|++.+|..|.||||+|+..|+.+++++|+++|++.
T Consensus       211 ~A~~~g--~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~  264 (278)
T 1dcq_A          211 YCCLTD--NAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR  264 (278)
T ss_dssp             HHHHTT--CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred             HHHHcC--CHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            999999  788899999999999999999999999999999999999999998864

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.78  E-value=1e-18  Score=188.52  Aligned_cols=142  Identities=25%  Similarity=0.297  Sum_probs=117.9

Q ss_pred             cCcHHHHHHHc-CCHHHHHHHHhcCCCcCCCC--CCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhc
Q psy817          278 RVTALHLAAEN-GYVECLRILLENHANCNERN--HKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSK  354 (854)
Q Consensus       278 ~~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~  354 (854)
                      +.|+||.|+.. |+.++++.|+++|++++..+  ..|.||||+|+..|+.+++++|+++|+++|..|..|+||||+|+..
T Consensus       199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~  278 (368)
T 3jue_A          199 PGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATIL  278 (368)
T ss_dssp             HHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred             CCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence            34899999999 99999999999999999988  8999999999999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCC---CccccCCCCCCHHHHHHh
Q psy817          355 NILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGA---DISSKTPSGSSALSIIMR  421 (854)
Q Consensus       355 ~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga---~~~~~~~~g~t~l~~a~~  421 (854)
                      +  +.+++++|+++|++++..|..|.||||+|+..|+.+++++|++++.   +....+..+.|+++.+..
T Consensus       279 g--~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~  346 (368)
T 3jue_A          279 G--HTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRD  346 (368)
T ss_dssp             T--CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC---------------------
T ss_pred             C--cHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHH
Confidence            9  7889999999999999999999999999999999999999998763   334455667777776643

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.78  E-value=8.2e-19  Score=189.31  Aligned_cols=144  Identities=17%  Similarity=0.191  Sum_probs=108.7

Q ss_pred             CchHHHHHHHc-CCHHHHHHHHHCCCCCCCCC--CCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHH
Q psy817          210 HETIVHSAVST-NAVDCVQLLLSLQINPNVLN--NKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAA  286 (854)
Q Consensus       210 ~~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~d--~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~  286 (854)
                      +.|+||.|+.. |+.++++.|+++|+++|..+  ..|.||||+|+..|+.+++++|++++ ++++..+ ..|.||||+|+
T Consensus       199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~G-advn~~d-~~G~TpLh~A~  276 (368)
T 3jue_A          199 PGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNG-ANVNQAD-SAGRGPLHHAT  276 (368)
T ss_dssp             HHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCC-TTSCCHHHHHH
T ss_pred             CCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCCC-CCCCCHHHHHH
Confidence            46788888888 89999999999999999888  78999999999999999999999886 8888765 45679999999


Q ss_pred             HcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCC---CCCCccCCCCcHHHHHHhcC
Q psy817          287 ENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGS---QVNASDCDNRTPLHASLSKN  355 (854)
Q Consensus       287 ~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~---~~~~~~~~g~t~L~~a~~~~  355 (854)
                      ..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++.+.   +....+..+.|+++.+....
T Consensus       277 ~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~  348 (368)
T 3jue_A          277 ILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS  348 (368)
T ss_dssp             HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred             HcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999987653   33344555667776655443

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.77  E-value=4.4e-18  Score=177.47  Aligned_cols=123  Identities=21%  Similarity=0.301  Sum_probs=102.0

Q ss_pred             hHHHHHHHcCCHHHHHHHHHCCCCC------CCCCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCccccccCCcCcHH
Q psy817          212 TIVHSAVSTNAVDCVQLLLSLQINP------NVLNNKGVSPLHIAADR---GLISCLKAILDSGMADVDIKTKERRVTAL  282 (854)
Q Consensus       212 t~L~~A~~~~~~~~v~~Ll~~g~~~------~~~d~~g~t~L~~A~~~---g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L  282 (854)
                      ++|+.|+..|+.+.++.+++.|+++      +..|..|.||||+|+..   |+.+++++|+++| +++|.++. .|.|||
T Consensus       132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g-a~in~~d~-~g~TpL  209 (278)
T 1dcq_A          132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS-GNLDKQTG-KGSTAL  209 (278)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC-SCTTCCCT-TCCCHH
T ss_pred             hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCC-CCccccCC-CCCCHH
Confidence            5788888888888888888888874      44477888888888888   8888888888886 88887654 566888


Q ss_pred             HHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCC
Q psy817          283 HLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQ  336 (854)
Q Consensus       283 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~  336 (854)
                      |+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus       210 h~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~  263 (278)
T 1dcq_A          210 HYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG  263 (278)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred             HHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            888888888888888888888888888888888888888888888888888774

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.77  E-value=2.3e-18  Score=147.29  Aligned_cols=93  Identities=39%  Similarity=0.597  Sum_probs=69.9

Q ss_pred             CCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHc
Q psy817          310 KEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALS  389 (854)
Q Consensus       310 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~  389 (854)
                      +|+||||+|+..|+.+++++|+++|++++..|..|+||||.|+..+  +.+++++|+++|++++.+|..|.||||+|+..
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~--~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~   78 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG--HLEVVKLLLEAGADVNAKDKNGRTPLHLAARN   78 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT--CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC--CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence            3667777777777777777777777777777777777777777777  66777777777777777777888888888888


Q ss_pred             CCHHHHHHHHHcCCC
Q psy817          390 ELSQCVDCLIMHGAD  404 (854)
Q Consensus       390 ~~~~~v~~Ll~~ga~  404 (854)
                      |+.+++++|+++|++
T Consensus        79 ~~~~~~~~Ll~~ga~   93 (93)
T 1n0q_A           79 GHLEVVKLLLEAGAY   93 (93)
T ss_dssp             TCHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHHHcCCC
Confidence            888888888888764

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.75  E-value=2.5e-18  Score=153.67  Aligned_cols=108  Identities=34%  Similarity=0.428  Sum_probs=74.9

Q ss_pred             CCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHH
Q psy817          306 ERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHI  385 (854)
Q Consensus       306 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~  385 (854)
                      .+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||.|+..+  +.+++++|+++|++++.+|..|.||||+
T Consensus         4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~--~~~~~~~Ll~~g~~~~~~d~~g~tpl~~   81 (115)
T 2l6b_A            4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNG--HAEIVKLLLAKGADVNARSKDGNTPEHL   81 (115)
T ss_dssp             CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTT--CHHHHHHHTTTTCCTTCCCTTCCCTTHH
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC--cHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence            34566667777777777777777777776666666666777777777666  5666777777777777777777777777


Q ss_pred             HHHcCCHHHHHHHHHcCCCccccCCCCCCH
Q psy817          386 AALSELSQCVDCLIMHGADISSKTPSGSSA  415 (854)
Q Consensus       386 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~  415 (854)
                      |+..|+.+++++|+++|++++.++..|.+|
T Consensus        82 A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~  111 (115)
T 2l6b_A           82 AKKNGHHEIVKLLDAKGADVNARSWGSSHH  111 (115)
T ss_dssp             HHTTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred             HHHCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence            777777777777777777777777776665

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.74  E-value=1e-17  Score=143.29  Aligned_cols=91  Identities=42%  Similarity=0.711  Sum_probs=44.4

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcC
Q psy817          243 GVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQ  322 (854)
Q Consensus       243 g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~  322 (854)
                      |.||||+|+..|+.+++++|++++ ++++.++ ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus         2 g~t~L~~A~~~~~~~~v~~Ll~~g-~~~n~~d-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~   79 (93)
T 1n0q_A            2 GRTPLHLAARNGHLEVVKLLLEAG-ADVNAKD-KNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG   79 (93)
T ss_dssp             -CCHHHHHHHHTCHHHHHHHHHTT-CCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             CCcHHHHHHHcCCHHHHHHHHHcC-CCCcccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence            445555555555555555555443 4444433 23335555555555555555555555555555555555555555555


Q ss_pred             CHHHHHHHHhCCC
Q psy817          323 SVECMEMLLRKGS  335 (854)
Q Consensus       323 ~~~~v~~Ll~~g~  335 (854)
                      +.+++++|+++|+
T Consensus        80 ~~~~~~~Ll~~ga   92 (93)
T 1n0q_A           80 HLEVVKLLLEAGA   92 (93)
T ss_dssp             CHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHcCC
Confidence            5555555555443

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.72  E-value=1.2e-17  Score=149.18  Aligned_cols=105  Identities=37%  Similarity=0.444  Sum_probs=65.7

Q ss_pred             CCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcC
Q psy817          276 ERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKN  355 (854)
Q Consensus       276 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~  355 (854)
                      ..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..|..|.||||.|+..+
T Consensus         7 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~   86 (115)
T 2l6b_A            7 KDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNG   86 (115)
T ss_dssp             CSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTT
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCC
Confidence            34456666666666666666666666666666666666666666666666666666666666666666666666666666


Q ss_pred             CCChHHHHHHHhCCCCCccCCCCCCCH
Q psy817          356 ILSVHPLEILLKWGANVNARDIFGYSP  382 (854)
Q Consensus       356 ~~~~~~v~~Ll~~g~d~n~~d~~g~t~  382 (854)
                        +.+++++|+++|+++|.++..|.||
T Consensus        87 --~~~~~~~Ll~~ga~~n~~~~~~~~~  111 (115)
T 2l6b_A           87 --HHEIVKLLDAKGADVNARSWGSSHH  111 (115)
T ss_dssp             --CHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred             --CHHHHHHHHHcCCCCCcCCcccccc
Confidence              5556666666666666666666555

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.59  E-value=3.3e-15  Score=131.93  Aligned_cols=91  Identities=25%  Similarity=0.352  Sum_probs=53.9

Q ss_pred             CCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHH
Q psy817          306 ERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHI  385 (854)
Q Consensus       306 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~  385 (854)
                      ..+.+|.||||.|+..|+.+++++|+++|++++..|..|.||||.|+..+  +.+++++|+++|++++.+|..|.||||+
T Consensus        19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~--~~~~v~~Ll~~ga~~~~~d~~g~tpl~~   96 (110)
T 2zgd_A           19 HMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNG--HLEVVKLLLEAGADVXAQDKFGKTAFDI   96 (110)
T ss_dssp             ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT--CHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred             ccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC--CHHHHHHHHHcCCCccccccCCCcHHHH
Confidence            34445555666666666666666666666665555556666666666655  5555666666666666666666666666


Q ss_pred             HHHcCCHHHHHHH
Q psy817          386 AALSELSQCVDCL  398 (854)
Q Consensus       386 A~~~~~~~~v~~L  398 (854)
                      |+..|+.+++++|
T Consensus        97 A~~~~~~~~~~~L  109 (110)
T 2zgd_A           97 SIDNGNEDLAEIL  109 (110)
T ss_dssp             HHHHTCHHHHHHH
T ss_pred             HHHcCCHHHHHHh
Confidence            6666666666654

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.55  E-value=1.5e-14  Score=127.74  Aligned_cols=85  Identities=31%  Similarity=0.408  Sum_probs=42.9

Q ss_pred             cCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCC
Q psy817          278 RVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNIL  357 (854)
Q Consensus       278 ~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~  357 (854)
                      |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||.|+..+  
T Consensus        24 g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~--  101 (110)
T 2zgd_A           24 LGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNG--  101 (110)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT--
T ss_pred             cchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcC--
Confidence            335555555555555555555555555555555555555555555555555555555555555555555555555554  


Q ss_pred             ChHHHHH
Q psy817          358 SVHPLEI  364 (854)
Q Consensus       358 ~~~~v~~  364 (854)
                      +.+++++
T Consensus       102 ~~~~~~~  108 (110)
T 2zgd_A          102 NEDLAEI  108 (110)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            3444443

>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114}

Probab=99.40  E-value=1.5e-12  Score=131.09  Aligned_cols=184  Identities=15%  Similarity=0.215  Sum_probs=130.9

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhchhhHHHHHHHHHHHHHHHhccCcccchhhhHHHHHHHHHHHHHH
Q psy817          560 FMETVWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNLM  639 (854)
Q Consensus       560 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~y~~~~wN~~d~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ll  639 (854)
                      ..+...++..+....+.+.+++..   +++++|+++.||++|+++++..++...         ......+.-++..+|++
T Consensus        43 ~l~~~e~~~~~iF~~E~~lri~~~---~~~~~y~~~~wni~D~~~v~~~~i~~~---------~~~~~~~lr~~RilR~l  110 (229)
T 4dxw_A           43 TIHLLDYGITIFFVIEILIRFIGE---KQKADFFKSGWNIFDTVIVAISLIPIP---------NNSSFLVLRLLRIFRVL  110 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHTTCC-----------------CCTTHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHc---CchhHHhcCCcHHHHHHHHHHHHhhcC---------ccHHHHHHHHHHHHHHH
Confidence            445566666666777777666542   456899999999999976654332110         00111122456677888


Q ss_pred             HHHcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--ccCChHHHHHHHHHHHhcCcchhhhhccC
Q psy817          640 GMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSED--RFQNPIIGFINILVMMTGELNVNEVLLGT  717 (854)
Q Consensus       640 ~~~~~~~~~G~~v~m~~~~~~d~~~f~~i~~~~l~aF~~~f~~l~~~~~--~f~~~~~s~~~~~~~~~G~~~~~~~~~~~  717 (854)
                      +++|..+.+..+...+.+....+..++++++++++.||+..+.+|++.+  .|+++..|+.++|..++||--.+ +..+.
T Consensus       111 rl~~~~~~l~~l~~~l~~s~~~l~~~~~~l~~~~~ifa~~g~~lf~~~~~~~F~~~~~a~~~lf~~~t~~~w~~-i~~~~  189 (229)
T 4dxw_A          111 RLISVIPELKQIIEAILESVRRVFFVSLLLFIILYIYATMGAILFGNDDPSRWGDLGISLITLFQVLTLSSWET-VMLPM  189 (229)
T ss_dssp             THHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSCTTTSSHHHHHHHHHHHHTTSSTHH-HHHHH
T ss_pred             HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccCHHHHHHHHHHHHccCCHHH-HHHHH
Confidence            8888888888999999999999999999999999999999999998754  59999999999999999984322 22211


Q ss_pred             CCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHh
Q psy817          718 EAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHK  761 (854)
Q Consensus       718 ~~~~~~~~~~~~~ilf~~f~~~~~ivLlNlLIA~~~~~~~~v~~  761 (854)
                      -..     ..++.+.|++|.++...+++||.||++.++|++.++
T Consensus       190 ~~~-----~~~~~~~f~~~~~i~~~i~lNlfiavi~~~f~~~~~  228 (229)
T 4dxw_A          190 QEI-----YWWSWVYFFSFIIICSITILNLVIAILVDVVIQKKL  228 (229)
T ss_dssp             HTT-----CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHh-----CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            111     135789999999999999999999999999998654

>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A*

Probab=99.37  E-value=4.2e-12  Score=132.44  Aligned_cols=186  Identities=17%  Similarity=0.231  Sum_probs=134.7

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhchhhHHHHHHHHHHHHHHHhccCcccchhhhHHHHHHHHHHHHHH
Q psy817          560 FMETVWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNLM  639 (854)
Q Consensus       560 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~y~~~~wN~~d~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ll  639 (854)
                      +.....++.+++..++.+.+++..    + ++|+++.||++|+++++..++..    ..       ...+..++..+|++
T Consensus        62 ~l~~~e~~~~~iF~~E~~lrl~~~----~-~~y~~~~wn~~Dl~~v~~~~i~~----~~-------~~~~lr~~RilR~l  125 (285)
T 3rvy_A           62 YTTLFNQIVITIFTIEIILRIYVH----R-ISFFKDPWSLFDFFVVAISLVPT----SS-------GFEILRVLRVLRLF  125 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTT----G-GGGGGCHHHHHHHHHHHHHHSCS----SS-------SCTHHHHHGGGGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH----h-HHHHcCChHHhHHHHHHHHHHcc----cc-------hHHHHHHHHHHHHH
Confidence            455566666666777777776543    2 78999999999998765544321    00       12345677788888


Q ss_pred             HHHcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--ccCChHHHHHHHHHHHhcCcchhhhhccC
Q psy817          640 GMIGQLPSVGTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPSED--RFQNPIIGFINILVMMTGELNVNEVLLGT  717 (854)
Q Consensus       640 ~~~~~~~~~G~~v~m~~~~~~d~~~f~~i~~~~l~aF~~~f~~l~~~~~--~f~~~~~s~~~~~~~~~G~~~~~~~~~~~  717 (854)
                      .+++.++.+..++..+.+...++..++++++++++.||+..+.+|++..  .|+++..|+..+|.+++|+---.++... 
T Consensus       126 rl~~~~~~l~~l~~~l~~~~~~l~~~~~~~~~~~~~fa~~g~~~f~~~~~~~F~s~~~a~~~~~~~~T~~g~~~di~~p-  204 (285)
T 3rvy_A          126 RLVTAVPQMRKIVSALISVIPGMLSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLESWSMGIVRP-  204 (285)
T ss_dssp             HHHHSSTTHHHHHHHHHHHGGGGHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHSSHHHHHHHHHHHHTTTTCCCCCHHH-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccCCHHHHHHHHHHHHHhCCCcHHHHHH-
Confidence            8899999999999999999999999999999999999999999997654  3999999999999999987322011101 


Q ss_pred             CCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhHH
Q psy817          718 EAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKTAGLD  766 (854)
Q Consensus       718 ~~~~~~~~~~~~~ilf~~f~~~~~ivLlNlLIA~~~~~~~~v~~~a~~~  766 (854)
                          ......++.++|++|++++.++++||.+|++++.|++..++.+.+
T Consensus       205 ----~~~~~~~~~~~f~~~~~i~~~~~lnl~~aii~~~f~~~~~~~~~~  249 (285)
T 3rvy_A          205 ----LMEVYPYAWVFFIPFIFVVTFVMINLVVAICVDAMAILNQKEEQH  249 (285)
T ss_dssp             ----HHTTCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHC----------
T ss_pred             ----HHHcCChHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                000113577999999999999999999999999999987765443

>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*

Probab=98.74  E-value=1.1e-07  Score=106.48  Aligned_cols=187  Identities=12%  Similarity=0.112  Sum_probs=114.1

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhchhhHHHHHHHHHHHHHHHhccCcccchhhhHHHHHHHHHHHHHH
Q psy817          560 FMETVWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNLM  639 (854)
Q Consensus       560 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~y~~~~wN~~d~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ll  639 (854)
                      +..++.++..+++.++.+.+++..   ...+.|+++.||++|+++++..++......... . ...+..+..++..+|++
T Consensus       240 ~l~~ie~i~~~iFtiE~ilR~~~~---~~k~~Y~ks~wniiDli~iip~~i~l~~~~~~~-~-~~~~~~~~~~lrvlRll  314 (514)
T 2r9r_B          240 PFFIVETLCIIWFSFEFLVRFFAC---PSKAGFFTNIMNIIDIVAIIPYYVTIFLTESNK-S-VLQFQNVRRVVQIFRIM  314 (514)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHS---SCSSSSTTSHHHHHHHHTTHHHHHHHHHHHTSC-S-HHHHHTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhC---CcHHHHHhchhHHHHHHHHHHHHHHHHhhhccc-c-chhhhhHHHHHHHHHHH
Confidence            445566677777777777776642   335689999999999988766554332211100 0 00011112233334444


Q ss_pred             HHHcccCcc------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CCccCChHHHHHHHHHHHhcCcchh
Q psy817          640 GMIGQLPSV------GTYVAMFSRVQLEFLKLFQAYICLLVGFTLTFCIVFPS--EDRFQNPIIGFINILVMMTGELNVN  711 (854)
Q Consensus       640 ~~~~~~~~~------G~~v~m~~~~~~d~~~f~~i~~~~l~aF~~~f~~l~~~--~~~f~~~~~s~~~~~~~~~G~~~~~  711 (854)
                      .++|.++.+      -.+...+.+.+..+..++++.+++++-||..+|...+.  ...|.++..+++..+..+++ +.|+
T Consensus       315 RvlRilkL~r~~~~l~~l~~tl~~s~~~l~~ll~~l~i~~~if~~~~~~~e~~~~~~~F~s~~~a~y~~~vT~TT-vGYG  393 (514)
T 2r9r_B          315 RILRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADERDSQFPSIPDAFWWAVVSMTT-VGYG  393 (514)
T ss_dssp             GGGGGGGGGGSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCSCSSHHHHHHHHHHHHTT-CCCS
T ss_pred             HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeccCCCccccchhhhhheeeeEEEe-cccC
Confidence            444444322      22333344444555555555566677788877766543  45699999999988888775 3333


Q ss_pred             hhhccCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhh
Q psy817          712 EVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQGLHKT  762 (854)
Q Consensus       712 ~~~~~~~~~~~~~~~~~~~ilf~~f~~~~~ivLlNlLIA~~~~~~~~v~~~  762 (854)
                      ++       .|.  ...+. +|+++.+++.++++|+.||++++.|++..++
T Consensus       394 Di-------~P~--t~~gr-~f~~~~~l~G~~~l~l~iavI~~~f~~~~~~  434 (514)
T 2r9r_B          394 DM-------VPT--TIGGK-IVGSLCAIAGVLTIALPVPVIVSNFNYFYHR  434 (514)
T ss_dssp             SS-------CCC--SHHHH-HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred             CC-------CCC--CcchH-hhehhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            32       111  13444 5788888899999999999999999988764

>4f4l_A ION transport protein; alpha helical membrane protein, voltage-gated sodium channel membrane, metal transport; 3.49A {Magnetococcus marinus}

Probab=98.68  E-value=2.3e-08  Score=86.70  Aligned_cols=101  Identities=14%  Similarity=0.146  Sum_probs=65.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCc--cCChHHHHHHHHHHHhcCcchhhhhccCCCCCccccchhHHHHHHHHHHH
Q psy817          662 FLKLFQAYICLLVGFTLTFCIVFPSEDR--FQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLF  739 (854)
Q Consensus       662 ~~~f~~i~~~~l~aF~~~f~~l~~~~~~--f~~~~~s~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ilf~~f~~~  739 (854)
                      +...++++++++.-||+....+|++.++  |+++..|+.++|.+++||--.+.+.....     ...+.+.+.|++|+++
T Consensus         6 ~~nv~~ll~l~~~ifAi~G~~lFg~~~~~~F~~~~~s~ltLF~i~T~e~W~~~~~~~~~-----~~~~~a~iyFi~fi~i   80 (112)
T 4f4l_A            6 VGSVAALLTVVFYIAAVMATNLYGATFPEWFGDLSKSLYTLFQVMTLESWSMGIVRPVM-----NVHPNAWVFFIPFIML   80 (112)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHTTTCHHHHSSHHHHHHHHHHHHTTTTCCCCCHHHHT-----TTSTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCccccccCHHHHHHHHHHHHHccccHHHHHHHHH-----hcCcHHHHHHHHHHHH
Confidence            4445667777888899999999987653  99999999999999999842221211111     1123578999999999


Q ss_pred             HHHHHHHHHHHHHHhhHHHHHhhhhHHH
Q psy817          740 VTVVLMNLLVGIAVQDIQGLHKTAGLDK  767 (854)
Q Consensus       740 ~~ivLlNlLIA~~~~~~~~v~~~a~~~~  767 (854)
                      .+.+++||+||++.++|++.+++.+.++
T Consensus        81 ~~fi~lNLfiaVi~~~f~~~~~~~~~~~  108 (112)
T 4f4l_A           81 TTFTVLNLFIGIIVDAMAITKEQEEEAK  108 (112)
T ss_dssp             HHHHHHHHHTTTC---------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999887765443

>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*

Probab=98.18  E-value=4.2e-05  Score=82.09  Aligned_cols=151  Identities=7%  Similarity=-0.017  Sum_probs=101.3

Q ss_pred             hhhhhhchhhHHHHHHHHHHHHHHHhccCcccchhhhHHHHHHHHHHHHHHHHHcccCccchHHHHHHHHHHHHHHHHHH
Q psy817          589 FREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNLMGMIGQLPSVGTYVAMFSRVQLEFLKLFQA  668 (854)
Q Consensus       589 ~~~y~~~~wN~~d~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ll~~~~~~~~~G~~v~m~~~~~~d~~~f~~i  668 (854)
                      ...|+++.||++|++.++.-+.......   ..       ..-++..+|++.+.|..+.+..+...+.+-...+..++++
T Consensus        66 ~~~~~~~~~~i~Dl~~i~~p~~~~~~~~---~~-------~~r~lr~~R~lrl~r~~~~~~~l~~~l~~~~~~l~~~~~~  135 (355)
T 3beh_A           66 GVVRDRTPKIAIDVLAVLVPLAAFLLDG---SP-------DWSLYCAVWLLKPLRDSTFFPVLGRVLANEARNLIGVTTL  135 (355)
T ss_dssp             CSSCCCHHHHHHHHHHHHHHHHHHHSCC---SG-------GGGGGGGGGGSHHHHTCSSHHHHHHHHHHTHHHHHHHHHH
T ss_pred             cceeccCcchHHHHHHHHHHHHHHHhcc---ch-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3458889999999987643222211110   00       1123445566677777776666666666666678888888


Q ss_pred             HHHHHHHHHHHHHHhcCCC--CccCChHHHHHHHHHHHhcCcchhhhhccCCCCCccccchhHHHHHHHHHHHHHHHHHH
Q psy817          669 YICLLVGFTLTFCIVFPSE--DRFQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVVLMN  746 (854)
Q Consensus       669 ~~~~l~aF~~~f~~l~~~~--~~f~~~~~s~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ilf~~f~~~~~ivLlN  746 (854)
                      ++++++.||+.+|.+.+..  +.|.++..+++-.+..++. ..|+|+       .|.  ...+. +|+++.++..+++++
T Consensus       136 ~~~~~~~~a~~~~~~e~~~~~~~f~~~~~s~y~~~~t~tt-vGygd~-------~p~--t~~~~-~~~~~~~~~g~~~~~  204 (355)
T 3beh_A          136 FGVVLFAVALAAYVIERDIQPEKFGSIPQAMWWAVVTLST-TGYGDT-------IPQ--SFAGR-VLAGAVMMSGIGIFG  204 (355)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCHHHHSSHHHHHHHHHHHHTT-CCCSSS-------CCC--SHHHH-HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCCcccccHHHHHHHHHhheee-cCCCCC-------CCC--ChhHH-HHHHHHHHHHHHHHH
Confidence            8889999999999998764  3488888888887776652 333332       111  13344 567778888899999


Q ss_pred             HHHHHHHhhHHHHH
Q psy817          747 LLVGIAVQDIQGLH  760 (854)
Q Consensus       747 lLIA~~~~~~~~v~  760 (854)
                      +.||.+++.+++-.
T Consensus       205 ~~~~~i~~~~~~~~  218 (355)
T 3beh_A          205 LWAGILATGFYQEV  218 (355)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999887643

>1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A

Probab=97.60  E-value=0.0026  Score=62.91  Aligned_cols=177  Identities=13%  Similarity=0.157  Sum_probs=103.2

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhchhhHHHHHHHHHHHHHHHhccCcccchhhhHHHHHHHHHHHHHH
Q psy817          560 FMETVWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIISVFLISCVYTKRTYIWQNHVGAVAVLLGWSNLM  639 (854)
Q Consensus       560 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~y~~~~wN~~d~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ll  639 (854)
                      .......+..++...+.+...+.   ....++|+++  |++|++.++-..+.....      .+.....+.-++..+|++
T Consensus        40 ~l~~~d~~~~~iF~~e~~lr~~~---~~~~~~y~~~--~iiDllailP~~~~~~~~------~~~~~~~~lr~lRllRll  108 (223)
T 1orq_C           40 RLYLVDLILVIILWADYAYRAYK---SGDPAGYVKK--TLYEIPALVPAGLLALIE------GHLAGLGLFRLVRLLRFL  108 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHT---TSCHHHHHHH--HHHHCTTHHHHHHHHHHH------HHHHTTTCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcc---cccHHHHHHH--hHHHHHHHHHHHHHHHHh------cchhHHHHHHHHHHHHHH
Confidence            34555666667777777766554   2456789987  999997665443322100      000000111233334444


Q ss_pred             HHHcccCccchHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCC--CCccCChHHHHHHHHHHHhcCcchhhhhc
Q psy817          640 GMIGQLPSVGTYVAMFSRVQL--EFLKLFQAYICLLVGFTLTFCIVFPS--EDRFQNPIIGFINILVMMTGELNVNEVLL  715 (854)
Q Consensus       640 ~~~~~~~~~G~~v~m~~~~~~--d~~~f~~i~~~~l~aF~~~f~~l~~~--~~~f~~~~~s~~~~~~~~~G~~~~~~~~~  715 (854)
                      +.+|..+........+.+.++  .+...+++.+++++.+++.++..=++  ++.|.++..+++-.+..++. ..|+|+  
T Consensus       109 R~~r~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~s~y~~~~t~tT-vGyGdi--  185 (223)
T 1orq_C          109 RILLIISRGSKFLSAIADAADKIRFYHLFGAVMLTVLYGAFAIYIVEYPDPNSSIKSVFDALWWAVVTATT-VGYGDV--  185 (223)
T ss_dssp             HHHHHHHSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSTTCSCCSHHHHHHHHHHHHTT-CCCCSS--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCcCcchhHHHhHHhHHhc-cCCCCC--
Confidence            444444434444444544443  45566666666777777777766442  34578888888877766652 333322  


Q ss_pred             cCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Q psy817          716 GTEAKPPVLLKGTAHIVFTIFMLFVTVVLMNLLVGIAVQDIQG  758 (854)
Q Consensus       716 ~~~~~~~~~~~~~~~ilf~~f~~~~~ivLlNlLIA~~~~~~~~  758 (854)
                           .|.  ...+. +++++.++..+.++++.+|.+++.+++
T Consensus       186 -----~P~--t~~~~-~~~~~~~~~G~~~~~~~i~~i~~~~~~  220 (223)
T 1orq_C          186 -----VPA--TPIGK-VIGIAVMLTGISALTLLIGTVSNMFQK  220 (223)
T ss_dssp             -----CCC--SHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----CCC--CHhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 111  13455 466777777788999999999998876

>3vou_A ION transport 2 domain protein, voltage-gated SOD channel; 4-helical bundle, ION channel, membrane, transport protein; 3.20A {Bacillus weihenstephanensis}

Probab=92.85  E-value=1.1  Score=40.54  Aligned_cols=77  Identities=9%  Similarity=0.133  Sum_probs=39.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCccCChHHHHHHHHHHHhcCcchhhhhccCCCCCccccchhHHHHHHHHHHHHHH
Q psy817          663 LKLFQAYICLLVGFTLTFCIVFPSEDRFQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLFVTV  742 (854)
Q Consensus       663 ~~f~~i~~~~l~aF~~~f~~l~~~~~~f~~~~~s~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ilf~~f~~~~~i  742 (854)
                      +.++++.+++++.+|..+|....+.    ++..+++-.+..++ .+.|.|+       .|.  ...+.++.++++++. +
T Consensus        27 ~~~~~~~~~~~~~~g~~~~~~~e~~----~~~~a~y~~~~t~t-TvGyGd~-------~p~--t~~~r~~~~~~~~~g-~   91 (148)
T 3vou_A           27 FQVLFVLTFLTLTSGTIFYSTVEGL----RPLDALYFSVVTLT-TVGDGNF-------SPQ--TDFGKVFTILYIFIG-I   91 (148)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTSCC----CHHHHHHHHHHHHT-TCCCSSC-------CCC--SHHHHHHHHHHHHHH-H
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCC----CHHHHHHHHHHHHH-ccCCCCC-------CCC--CccHHHHHHHHHHHH-H
Confidence            3445666666677777777765442    45555555444332 2333332       111  134666666665544 4


Q ss_pred             HHHHHHHHHHHh
Q psy817          743 VLMNLLVGIAVQ  754 (854)
Q Consensus       743 vLlNlLIA~~~~  754 (854)
                      .++=+.++.++.
T Consensus        92 ~~~~~~~~~~~~  103 (148)
T 3vou_A           92 GLVFGFIHKLAV  103 (148)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHH
Confidence            444456665555

>2a9h_A Voltage-gated potassium channel; potassium channel, KCSA, structure, membrane protein, metal transport; HET: PCA; NMR {Streptomyces lividans} SCOP: f.14.1.1

Probab=92.26  E-value=0.53  Score=42.79  Aligned_cols=84  Identities=8%  Similarity=0.024  Sum_probs=50.7

Q ss_pred             HHHHHHHHHHHHHHHHHhcCC--CCccCChHHHHHHHHHHHhcCcchhhhhccCCCCCccccchhHHHHHHHHHHHHHHH
Q psy817          666 FQAYICLLVGFTLTFCIVFPS--EDRFQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVV  743 (854)
Q Consensus       666 ~~i~~~~l~aF~~~f~~l~~~--~~~f~~~~~s~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ilf~~f~~~~~iv  743 (854)
                      +++++++++.|+.++|.+=+.  .+.|.++..+++-.+..++ .+.|.|+       .|.  ...+.++ +++.++..++
T Consensus        56 ~~~~~~~i~~~a~~~~~~E~~~~~~~~~s~~~a~y~s~vTlt-TVGYGDi-------~P~--t~~gr~~-~~~~~l~Gv~  124 (155)
T 2a9h_A           56 TVLLVIVLLAGSYLAVLAERGAPGAALISYPDALWWSVETAT-TVGYGDL-------YPV--TLWGRCV-AVVVMVAGIT  124 (155)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSSCSSTTSHHHHHHHHHHHHT-TCCCSSS-------CCC--SHHHHHH-HHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCCCccCcccceeheeeeeee-cccCCCC-------CCC--ChhHHHH-HHHHHHHHHH
Confidence            344455566777778777544  4568888888887766554 2444433       111  1345544 4555556666


Q ss_pred             HHHHHHHHHHhhHHHHH
Q psy817          744 LMNLLVGIAVQDIQGLH  760 (854)
Q Consensus       744 LlNlLIA~~~~~~~~v~  760 (854)
                      ++=+.+|.+++.+.+-.
T Consensus       125 ~~a~~~~~i~~~~~~~~  141 (155)
T 2a9h_A          125 SYGLVFAAVATWFVGRE  141 (155)
T ss_dssp             HHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            77788888877776543

>2ih3_C Voltage-gated potassium channel; ION channel D-amino acid semi-synthetic, membrane protein; HET: 1EM; 1.72A {Streptomyces lividans} PDB: 2ih1_C* 1r3j_C* 1k4d_C* 1r3i_C* 1k4c_C* 1r3k_C* 1r3l_C* 2bob_C* 2boc_C* 2hvj_C* 2hvk_C* 2itc_C 2itd_C 3gb7_C* 3iga_C* 1jvm_A 1s5h_C* 3ifx_A* 1j95_A 2jk5_C* ...

Probab=90.85  E-value=2.8  Score=36.23  Aligned_cols=85  Identities=7%  Similarity=0.042  Sum_probs=51.9

Q ss_pred             HHHHHHHHHHHHHHHHhcCC--CCccCChHHHHHHHHHHHhcCcchhhhhccCCCCCccccchhHHHHHHHHHHHHHHHH
Q psy817          667 QAYICLLVGFTLTFCIVFPS--EDRFQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVVL  744 (854)
Q Consensus       667 ~i~~~~l~aF~~~f~~l~~~--~~~f~~~~~s~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ilf~~f~~~~~ivL  744 (854)
                      ++++++++.++..++.+=++  ++.+.++.++++-.+..++ .+.|.|+       .|.  ...+.+ ++++..+..+++
T Consensus        34 ~~~~~~~~~~a~~~~~~E~~~~~~~~~~~~~a~y~~~~T~t-TvGyGDi-------~P~--t~~gr~-~~~~~~~~Gi~~  102 (122)
T 2ih3_C           34 VLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWACETAT-TVAYGDL-------YPV--TLWGRL-VAVVVMVAGITS  102 (122)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSTTCCCCSHHHHHHHHHHHHT-TCCCSSS-------CCC--SHHHHH-HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhheeeecCCCCccCccccchhheeeeee-eeecCCC-------CCC--CccHHH-HHHHHHHHHHHH
Confidence            44455566677777766543  4567888888877666554 2333332       111  134554 445555566777


Q ss_pred             HHHHHHHHHhhHHHHHhh
Q psy817          745 MNLLVGIAVQDIQGLHKT  762 (854)
Q Consensus       745 lNlLIA~~~~~~~~v~~~  762 (854)
                      +-+.+|.+++.+++..++
T Consensus       103 ~~~~~~~i~~~~~~~~~~  120 (122)
T 2ih3_C          103 FGLVTAALATWFVGREQE  120 (122)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            788888888888776543

>1ors_C Potassium channel; voltage-dependent, voltage sensor, KVAP, FAB complex, membrane protein; 1.90A {Aeropyrum pernix} SCOP: f.14.1.1

Probab=84.17  E-value=2.4  Score=37.25  Aligned_cols=42  Identities=12%  Similarity=0.209  Sum_probs=30.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhchhhHHHHHHHHH
Q psy817          561 METVWYVLALLATIELIRKIFGLVEYASFREYCSHVTNLFEWYMIIS  607 (854)
Q Consensus       561 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~y~~~~wN~~d~~~~~~  607 (854)
                      .....++..++...+.+...+.   ..++.+|++  ||++|++.++-
T Consensus        39 l~~~d~~~~~iFt~E~~lRl~~---~~~~~~y~~--~niiDllailp   80 (132)
T 1ors_C           39 LYLVDLILVIILWADYAYRAYK---SGDPAGYVK--KTLYEIPALVP   80 (132)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH---TTSTTTTTT--TCGGGTGGGSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH---CCCHHHHHH--HHHHHHHHHHH
Confidence            4455666777777777777664   356788999  99999986543

>3eff_K Voltage-gated potassium channel; FULL length KCSA, bulge helix, cell membrane, ION transport, ionic channel, membrane, transmembrane; 3.80A {Streptomyces lividans}

Probab=84.09  E-value=21  Score=31.31  Aligned_cols=90  Identities=7%  Similarity=0.013  Sum_probs=54.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCC--CCccCChHHHHHHHHHHHhcCcchhhhhccCCCCCccccchhHHHHHHHHHH
Q psy817          661 EFLKLFQAYICLLVGFTLTFCIVFPS--EDRFQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFML  738 (854)
Q Consensus       661 d~~~f~~i~~~~l~aF~~~f~~l~~~--~~~f~~~~~s~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ilf~~f~~  738 (854)
                      .++..+++++++++.++..++.+-+.  .+.+.++..+++-.+..++ .+.|.|+       .|.  ...+.+ |+++.+
T Consensus         7 ~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~a~yf~~~T~t-TvGyGd~-------~P~--t~~~r~-~~~~~~   75 (139)
T 3eff_K            7 AAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETAT-TVGYGDL-------YPV--TLWGRL-VAVVVM   75 (139)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTTSSCTTCCCCCHHHHHHHHHHHHT-TCCCSSS-------CCC--SSHHHH-HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCHHHHHHHHheeee-cccCCCC-------cCC--CcCHHH-HHHHHH
Confidence            34455566666777788888877553  3457778787776666443 2334433       111  134554 445556


Q ss_pred             HHHHHHHHHHHHHHHhhHHHHHh
Q psy817          739 FVTVVLMNLLVGIAVQDIQGLHK  761 (854)
Q Consensus       739 ~~~ivLlNlLIA~~~~~~~~v~~  761 (854)
                      ++.+.++-+.++.+++.+.+-.+
T Consensus        76 ~~G~~~~~~~~~~i~~~~~~~~~   98 (139)
T 3eff_K           76 VAGITSFGLVTAALATWFVGREQ   98 (139)
T ss_dssp             HHHHHHHHHHHHHHTTTTTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            66777888888888887755443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	854
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	3e-40
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-39
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	4e-39
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	5e-35
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-33
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-25
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-35
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-30
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	3e-25
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	3e-18
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	2e-23
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	4e-19
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	2e-17
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	1e-22
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	3e-22
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	1e-19
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	1e-17
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-22
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	5e-21
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-18
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-16
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-08
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	1e-19
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	7e-19
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	4e-10
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	5e-18
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	6e-17
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	1e-06
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	7e-18
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	3e-17
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	1e-13
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	4e-12
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	0.002
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	8e-17
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	1e-15
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	4e-12
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	1e-07
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	1e-04
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-16
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	4e-16
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	4e-14
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-04
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	8e-16
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	3e-14
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	4e-13
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	3e-15
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	9e-13
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	2e-08
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	4e-05
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	8e-13
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	1e-07
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	5e-10
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	1e-09
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	3e-06
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	6e-06
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	2e-05
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	3e-09
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	1e-08
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	3e-06
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	7e-09
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	8e-07
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	9e-07
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	1e-04
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	0.001
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	1e-08
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	4e-07
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	0.001
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	1e-07
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	4e-05
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	0.001
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	2e-05

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  151 bits (382), Expect = 3e-40
 Identities = 83/276 (30%), Positives = 140/276 (50%), Gaps = 11/276 (3%)

Query: 154 ALHLAAFNGSIKGCSWLMLHGHDINFT-KDSYTPLHFAVLGNYVDCAKFLIKNKAHIH-- 210
            LH+A+F G +     L+  G   N +     TPLH A    + + AK+L++NKA ++  
Sbjct: 3   PLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAK 62

Query: 211 ----ETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSG 266
               +T +H A      + V+LLL    NPN+    G +PLHIAA  G +  + A+L+  
Sbjct: 63  AKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKE 122

Query: 267 MADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVEC 326
            A     TK+   T LH+AA+ G V    +LLE  A+ N        PLH+A    +++ 
Sbjct: 123 -ASQACMTKKGF-TPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDI 180

Query: 327 MEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIA 386
           +++LL +G   ++   +  TPLH +  +N + V     LL++G + NA  + G +P+H+A
Sbjct: 181 VKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVAR--SLLQYGGSANAESVQGVTPLHLA 238

Query: 387 ALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRN 422
           A    ++ V  L+   A+ +    SG + L ++ + 
Sbjct: 239 AQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQE 274

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  148 bits (375), Expect = 2e-39
 Identities = 82/310 (26%), Positives = 134/310 (43%), Gaps = 14/310 (4%)

Query: 123 TALLWCVFVKREDLLDALHQLGADL---SNDKYGALHLAAFNGSIKGCSWLMLHGHDINF 179
           T L    F+    ++  L Q GA     +      LH+AA  G  +   +L+ +   +N 
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 61

Query: 180 T-KDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETI------VHSAVSTNAVDCVQLLLSL 232
             KD  TPLH A    + +  K L++N A+ +         +H A     V+ V  LL  
Sbjct: 62  KAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK 121

Query: 233 QINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVE 292
           + +   +  KG +PLH+AA  G +   + +L+   A  +   K    T LH+A  +  ++
Sbjct: 122 EASQACMTKKGFTPLHVAAKYGKVRVAELLLERD-AHPNAAGKNGL-TPLHVAVHHNNLD 179

Query: 293 CLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASL 352
            +++LL    + +        PLH+AAK   VE    LL+ G   NA      TPLH + 
Sbjct: 180 IVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAA 239

Query: 353 SKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSG 412
            +    +  + +LL   AN N  +  G +P+H+ A        D LI HG  + + T  G
Sbjct: 240 QEGHAEM--VALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMG 297

Query: 413 SSALSIIMRN 422
            + L +    
Sbjct: 298 YTPLHVASHY 307

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  148 bits (373), Expect = 4e-39
 Identities = 93/343 (27%), Positives = 144/343 (41%), Gaps = 47/343 (13%)

Query: 123 TALLWCVFVKREDLLDALHQLGADL---SNDKYGALHLAAFNGSIKGCSWLMLHGHDINF 179
           T L         ++   L Q  A +   + D    LH AA  G       L+ +  + N 
Sbjct: 35  TPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNL 94

Query: 180 ----------------------------------TKDSYTPLHFAVLGNYVDCAKFLIKN 205
                                             TK  +TPLH A     V  A+ L++ 
Sbjct: 95  ATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLER 154

Query: 206 KAHIHET------IVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCL 259
            AH +         +H AV  N +D V+LLL    +P+     G +PLHIAA +  +   
Sbjct: 155 DAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVA 214

Query: 260 KAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAA 319
           +++L             + VT LHLAA+ G+ E + +LL   AN N  N     PLHL A
Sbjct: 215 RSLLQ--YGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVA 272

Query: 320 KCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFG 379
           +   V   ++L++ G  V+A+     TPLH +     +    ++ LL+  A+VNA+   G
Sbjct: 273 QEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNI--KLVKFLLQHQADVNAKTKLG 330

Query: 380 YSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRN 422
           YSP+H AA    +  V  L+ +GA  +  +  G++ L+I  R 
Sbjct: 331 YSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRL 373

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (342), Expect = 5e-35
 Identities = 71/282 (25%), Positives = 122/282 (43%), Gaps = 14/282 (4%)

Query: 148 SNDKYGALHLAAFNGSIKGCSWLMLHGHDINFT-KDSYTPLHFAVLGNYVDCAKFLIKNK 206
           +   +  LH+AA  G ++    L+      N   K+  TPLH AV  N +D  K L+   
Sbjct: 129 TKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRG 188

Query: 207 AHIHE------TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLK 260
              H       T +H A   N V+  + LL    + N  + +GV+PLH+AA  G    + 
Sbjct: 189 GSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVA 248

Query: 261 AILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAK 320
            +  S  A+ ++  K    T LHL A+ G+V    +L+++    +        PLH+A+ 
Sbjct: 249 LL-LSKQANGNLGNKSGL-TPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASH 306

Query: 321 CQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGY 380
             +++ ++ LL+  + VNA      +PLH +  +    +  + +LLK GA+ N     G 
Sbjct: 307 YGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDI--VTLLLKNGASPNEVSSDGT 364

Query: 381 SPIHIAALSELSQCVDCLIM---HGADISSKTPSGSSALSII 419
           +P+ IA         D L +     + +        S    +
Sbjct: 365 TPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSFPETV 406

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (329), Expect = 2e-33
 Identities = 68/269 (25%), Positives = 115/269 (42%), Gaps = 13/269 (4%)

Query: 124 ALLWCVFVKREDLLDALHQLGADL---SNDKYGALHLAAFNGSIKGCSWLMLHGHDINF- 179
            L       +  + + L +  A       +    LH+A  + ++     L+  G   +  
Sbjct: 135 PLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSP 194

Query: 180 TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE------TIVHSAVSTNAVDCVQLLLSLQ 233
             + YTPLH A   N V+ A+ L++     +       T +H A      + V LLLS Q
Sbjct: 195 AWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQ 254

Query: 234 INPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVEC 293
            N N+ N  G++PLH+ A  G +     ++  G   VD  T+    T LH+A+  G ++ 
Sbjct: 255 ANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHG-VMVDATTRMGY-TPLHVASHYGNIKL 312

Query: 294 LRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLH-ASL 352
           ++ LL++ A+ N +      PLH AA+    + + +LL+ G+  N    D  TPL  A  
Sbjct: 313 VKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKR 372

Query: 353 SKNILSVHPLEILLKWGANVNARDIFGYS 381
              I     L+++    + V   D    S
Sbjct: 373 LGYISVTDVLKVVTDETSFVLVSDKHRMS 401

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (267), Expect = 2e-25
 Identities = 43/199 (21%), Positives = 81/199 (40%), Gaps = 31/199 (15%)

Query: 280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNA 339
           T LH+A+  G++  ++ LL+  A+ N  N K + PLH+AA+    E  + LL+  ++VNA
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 61

Query: 340 SDCDNRTPLHASLSKNILSVHPLEI-------------------------------LLKW 368
              D++TPLH +      ++  L +                               LL+ 
Sbjct: 62  KAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK 121

Query: 369 GANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSIS 428
            A+       G++P+H+AA     +  + L+   A  ++   +G + L + + +    I 
Sbjct: 122 EASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIV 181

Query: 429 SVRKKLDSSISLQDPEAST 447
            +      S         T
Sbjct: 182 KLLLPRGGSPHSPAWNGYT 200

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (337), Expect = 2e-35
 Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 24/277 (8%)

Query: 154 ALHLAAFNGSIKGCSWLMLHGHDINFTKDS--YTPLHFAVLGNYVDCAKFLIKNKAHI-- 209
            L  A  N  +     L+  G ++NF ++   +TPLH AV  +  D  + L+++ A    
Sbjct: 8   LLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL 67

Query: 210 ----HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRG----LISCLKA 261
                 T    A    +V  ++L LS   + N  +  G +    AA  G    L    K 
Sbjct: 68  RKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKR 127

Query: 262 ILDSGMADVDIKTKERRV----TALHLAAENGYVECLRILLENH-ANCNERN----HKEQ 312
             +  +     + +ER      TAL  AAE G+VE L+ILL+   A+ N  +    +   
Sbjct: 128 GANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALI 187

Query: 313 IPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILL-KWGAN 371
             L  +          +LL  G+ VN      +TPL  ++ K  L +  ++ LL +    
Sbjct: 188 HALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGL--VQRLLEQEHIE 245

Query: 372 VNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSK 408
           +N  D  G + + +A   +L +  + L   GA     
Sbjct: 246 INDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG 282

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (298), Expect = 2e-30
 Identities = 63/283 (22%), Positives = 113/283 (39%), Gaps = 27/283 (9%)

Query: 120 EKTTALLWCVFVKREDLLDALHQLGADL--SNDKYG--ALHLAAFNGSIKGCSW-LMLHG 174
           E    L+  V  +  DL+  L + GA++    ++ G   LH A            L    
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63

Query: 175 HDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE------TIVHSAVSTNAVDCVQL 228
             +   K+  TP   A +   V   K  +   A ++E      T    A     V  ++ 
Sbjct: 64  DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKF 123

Query: 229 LLSLQINPNVLN----------NKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERR 278
           L     N N+              G + L  AA++G +  LK +LD   ADV+      R
Sbjct: 124 LYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGR 183

Query: 279 VTALHLAAENGYV---ECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLL-RKG 334
              +H    +          +LL++ A+ N R  + + PL LA + + +  ++ LL ++ 
Sbjct: 184 NALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEH 243

Query: 335 SQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDI 377
            ++N +D D +T L  ++   +  +   E+L K GA+ +  D+
Sbjct: 244 IEINDTDSDGKTALLLAVELKLKKI--AELLCKRGASTDCGDL 284

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (259), Expect = 3e-25
 Identities = 70/262 (26%), Positives = 111/262 (42%), Gaps = 23/262 (8%)

Query: 182 DSYTPLHFAVLGNYVDCAKFLIKNKAHIH-------ETIVHSAVSTNAVDCVQLLLSLQI 234
           +    L  AV    VD  + L++  A+++        T +H+AV  +  D V+LLL    
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63

Query: 235 NPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECL 294
           +P +    G +P  +AA  G +  LK  L  G      +      TA   AA  G V+ L
Sbjct: 64  DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGA--DVNECDFYGFTAFMEAAVYGKVKAL 121

Query: 295 RILLENHANCNERNHKEQI----------PLHLAAKCQSVECMEMLL-RKGSQVNASDCD 343
           + L +  AN N R   ++            L  AA+   VE +++LL   G+ VNA D  
Sbjct: 122 KFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNM 181

Query: 344 NRTPLHASLSKNILSVHP--LEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMH 401
            R  L  +L  +  S       +LL  GA+VN R   G +P+ +A   +    V  L+  
Sbjct: 182 GRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQ 241

Query: 402 -GADISSKTPSGSSALSIIMRN 422
              +I+     G +AL + +  
Sbjct: 242 EHIEINDTDSDGKTALLLAVEL 263

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.5 bits (205), Expect = 3e-18
 Identities = 31/198 (15%), Positives = 65/198 (32%), Gaps = 24/198 (12%)

Query: 112 LFSKASQAEKTTALLWCVFVKREDLLDALHQLGADLSNDKYGALHLAAFNGSIKGCSWLM 171
               A   +              +L     +    L      AL  AA  G ++    L+
Sbjct: 109 FMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILL 168

Query: 172 LH-GHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLL 230
              G D+N                             +     + S+  ++      LLL
Sbjct: 169 DEMGADVNACD----------------------NMGRNALIHALLSSDDSDVEAITHLLL 206

Query: 231 SLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGY 290
               + NV   +G +PL +A ++  +  ++ +L+    +++    + + TAL LA E   
Sbjct: 207 DHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGK-TALLLAVELKL 265

Query: 291 VECLRILLENHANCNERN 308
            +   +L +  A+ +  +
Sbjct: 266 KKIAELLCKRGASTDCGD 283

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 98.2 bits (243), Expect = 2e-23
 Identities = 57/269 (21%), Positives = 86/269 (31%), Gaps = 34/269 (12%)

Query: 147 LSNDKYGALHLAAFNGSIKGCSWLMLHGHDINF----TKDSYTPLHFAVLGNYVDCAKFL 202
           ++ D   ALHLA  +       +L+       +         T LH A +       + L
Sbjct: 5   VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKL 64

Query: 203 IKNKAHI------HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLI 256
               A +        T +H A    A  C  +LL  + +     +               
Sbjct: 65  YAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTY------------ 112

Query: 257 SCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLH 316
                         D         A   +  N   E      +        N+    PLH
Sbjct: 113 ---------LTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLH 163

Query: 317 LAAKCQSVECMEMLLRKGSQVNA-SDCDNRTPLHASLSKNILSVHPLEILLKWGANVNAR 375
           +A   +  E + +L   G+ +N       RTPLH ++     SV  LE+LLK GA+  AR
Sbjct: 164 VAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASV--LELLLKAGADPTAR 221

Query: 376 DIFGYSPIHIAALSELSQCVDCLIMHGAD 404
              G +P+  A L         L  HGA 
Sbjct: 222 MYGGRTPLGSALLRPNPILARLLRAHGAP 250

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 85.5 bits (210), Expect = 4e-19
 Identities = 51/239 (21%), Positives = 77/239 (32%), Gaps = 28/239 (11%)

Query: 123 TALLWCVFVKREDLLDALHQLGADLSN----DKYG--ALHLAAFNGSIKGCSWLM-LHGH 175
           TAL   V  + E  LD L    A        +  G  ALHLAA  G       L      
Sbjct: 11  TALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG 70

Query: 176 DINFTKDSYTPLHFAVLGNYVDCAKFLIKNKA--------------------HIHETIVH 215
            +   +  +T LH A       CA  L++ +                       H     
Sbjct: 71  VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAV 130

Query: 216 SAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTK 275
            +      +        ++     N  G +PLH+A        ++ + D+G      +  
Sbjct: 131 DSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPT 190

Query: 276 ERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKG 334
             R T LHLA E      L +LL+  A+   R +  + PL  A    +     +L   G
Sbjct: 191 CGR-TPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHG 248

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 80.5 bits (197), Expect = 2e-17
 Identities = 43/257 (16%), Positives = 83/257 (32%), Gaps = 41/257 (15%)

Query: 180 TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVL 239
           T+D  T LH AV+  +     FL+   A                             ++ 
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYL------------------------DLQ 41

Query: 240 NNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLE 299
           N+ G + LH+AA  G  S ++ +  +G   +  +         HLA       C  +LL+
Sbjct: 42  NDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTAL--HLACRVRAHTCACVLLQ 99

Query: 300 NHANCNERNHKEQIP--------------LHLAAKCQSVECMEMLLRKGSQVNASDCDNR 345
              +         +                  +      E          Q+ A + D  
Sbjct: 100 PRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGH 159

Query: 346 TPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADI 405
           TPLH ++      +    +              G +P+H+A  ++ +  ++ L+  GAD 
Sbjct: 160 TPLHVAVIHKDAEMVR-LLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADP 218

Query: 406 SSKTPSGSSALSIIMRN 422
           +++   G + L   +  
Sbjct: 219 TARMYGGRTPLGSALLR 235

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 97.0 bits (240), Expect = 1e-22
 Identities = 31/270 (11%), Positives = 87/270 (32%), Gaps = 30/270 (11%)

Query: 110 ATLFSKASQAEKTTALLWCVFVKREDLLDALHQLGADLSNDKYG----ALHLAAFNGSIK 165
             +     + +    L   +F + +++  +L+   ++ +++         H++  +   +
Sbjct: 28  PVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQE 87

Query: 166 GCSWLMLHGHDINFTKDSY--TPLHFAVLGNYVDCAKFLIKNKAHI------HETIVHSA 217
                     ++N   D +  TPLH+      ++  K L+K+ ++        E+ +  A
Sbjct: 88  VNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKA 147

Query: 218 ----VSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRG-----------LISCLKAI 262
                + ++     LL  L     + ++   + LH                  +  L   
Sbjct: 148 VKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGW 207

Query: 263 LDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENH---ANCNERNHKEQIPLHLAA 319
           +              + +  +          L  L          N ++      L++AA
Sbjct: 208 IVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAA 267

Query: 320 KCQSVECMEMLLRKGSQVNASDCDNRTPLH 349
           +  ++  ++ LL  G+    ++     P+ 
Sbjct: 268 RLGNISIVDALLDYGADPFIANKSGLRPVD 297

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 95.9 bits (237), Expect = 3e-22
 Identities = 44/304 (14%), Positives = 100/304 (32%), Gaps = 37/304 (12%)

Query: 140 LHQLGADLSNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSY-TPLHFAVLGNYVDC 198
           +     DL++D          +  +K    L     + N  K      L   +     + 
Sbjct: 3   IITFTHDLTSD--------FLSSPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEM 54

Query: 199 AKFLIKNKAHI-------HETIVHSAVSTNAVDCVQLLLSLQINPNV-LNNKGVSPLHIA 250
              L  + ++        ++   H +  +   +      + Q+N N+ ++  G +PLH  
Sbjct: 55  PTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWL 114

Query: 251 ADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLEN----HANCNE 306
                +  +K ++  G ++          + L  A ++                +     
Sbjct: 115 TSIANLELVKHLVKHG-SNRLYGDNMGE-SCLVKAVKSVNNYDSGTFEALLDYLYPCLIL 172

Query: 307 RNHKEQIPLHLA------------AKCQSVECMEMLLRKGSQ-VNASDCDNRTPLHASLS 353
            +   +  LH              AK      M  +++K ++ + +   +  +  +    
Sbjct: 173 EDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNG 232

Query: 354 KNILSV-HPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSG 412
           +   S+   L++       +NA+D  G + ++IAA       VD L+ +GAD      SG
Sbjct: 233 ERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSG 292

Query: 413 SSAL 416
              +
Sbjct: 293 LRPV 296

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 88.2 bits (217), Expect = 1e-19
 Identities = 29/202 (14%), Positives = 63/202 (31%), Gaps = 29/202 (14%)

Query: 146 DLSNDKYG--ALHLAAFNGSIKGCSWLMLHGHDIN-FTKDSYTPLHFA----------VL 192
           ++  D++G   LH      +++    L+ HG +         + L  A            
Sbjct: 100 NIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTF 159

Query: 193 GNYVDCAKFLIKNKAHIHETIVHSAVSTNAVD------------CVQLLLSLQINPNVLN 240
              +D     +  +  ++ TI+H  + T+ +              +  ++  Q  P    
Sbjct: 160 EALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSG 219

Query: 241 NKGVSPLHIAADRGLISCLKAILDSGM---ADVDIKTKERRVTALHLAAENGYVECLRIL 297
                      +      +   LD        ++ +      T L++AA  G +  +  L
Sbjct: 220 TNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGD-TCLNIAARLGNISIVDAL 278

Query: 298 LENHANCNERNHKEQIPLHLAA 319
           L+  A+    N     P+   A
Sbjct: 279 LDYGADPFIANKSGLRPVDFGA 300

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 82.0 bits (201), Expect = 1e-17
 Identities = 38/269 (14%), Positives = 84/269 (31%), Gaps = 22/269 (8%)

Query: 172 LHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLS 231
              HD+  +    +PL    +   +         +    E  +   +     +    L +
Sbjct: 5   TFTHDLT-SDFLSSPLK---IMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNN 60

Query: 232 LQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYV 291
              N N             +   L+  +     +   +++I   E   T LH       +
Sbjct: 61  DSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANL 120

Query: 292 ECLRILLENHANCNERNHKEQIPLHLAAKC----QSVECMEMLLRKGSQVNASDCDNRTP 347
           E ++ L+++ +N    ++  +  L  A K      S     +L      +   D  NRT 
Sbjct: 121 ELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTI 180

Query: 348 LHA-----------SLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVD 396
           LH            + +K  L +    I+ K    + +      S  +          ++
Sbjct: 181 LHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILE 240

Query: 397 CLIMH---GADISSKTPSGSSALSIIMRN 422
            L +       ++++  +G + L+I  R 
Sbjct: 241 NLDLKWIIANMLNAQDSNGDTCLNIAARL 269

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.0 bits (235), Expect = 1e-22
 Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 5/211 (2%)

Query: 209 IHETIVHSAVSTNAVDCV-QLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGM 267
           +   +V +   +  ++ + + +L+ +      +    + LH A   G    ++ +L  G+
Sbjct: 2   VSNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGV 61

Query: 268 ADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECM 327
              D          LH+AA  G  E ++ LL   A  N  N     PLH AA     E  
Sbjct: 62  PVNDKDDAGWSP--LHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIA 119

Query: 328 EMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAA 387
            MLL  G+  +A D    T +H + +K  L +    ILL + A+ N +D  G +P+H+A 
Sbjct: 120 VMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIH--ILLYYKASTNIQDTEGNTPLHLAC 177

Query: 388 LSELSQCVDCLIMHGADISSKTPSGSSALSI 418
             E  +    L+  GA I  +     + L +
Sbjct: 178 DEERVEEAKLLVSQGASIYIENKEEKTPLQV 208

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.4 bits (223), Expect = 5e-21
 Identities = 44/235 (18%), Positives = 88/235 (37%), Gaps = 33/235 (14%)

Query: 155 LHLAAFNGSIKGCSWLML-HGHDINFT-KDSYTPLHFAVLGNYVDCAKFLIKNKAHIHET 212
           +   A++G ++     +L        T +DS T LH+A    + +  +FL++    +++ 
Sbjct: 7   VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66

Query: 213 IVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDI 272
                   +                                     +   L    A V+ 
Sbjct: 67  DDAGWSPLHIAASAG----------------------------RDEIVKALLGKGAQVNA 98

Query: 273 KTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLR 332
             +    T LH AA     E   +LLE  AN + ++H E   +H AA   +++ + +LL 
Sbjct: 99  VNQNGC-TPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLY 157

Query: 333 KGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAA 387
             +  N  D +  TPLH +  +  +     ++L+  GA++   +    +P+ +A 
Sbjct: 158 YKASTNIQDTEGNTPLHLACDEERVEE--AKLLVSQGASIYIENKEEKTPLQVAK 210

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.5 bits (205), Expect = 1e-18
 Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 13/208 (6%)

Query: 134 EDLLDALHQLGADLS-NDKYG--ALHLAAFNGSIKGCSWLMLHGHDINF-TKDSYTPLHF 189
           E+L +++    +  +  D+    ALH A   G  +   +L+  G  +N      ++PLH 
Sbjct: 17  EELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHI 76

Query: 190 AVLGNYVDCAKFLIKNKAHIHE------TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKG 243
           A      +  K L+   A ++       T +H A S N  +   +LL    NP+  ++  
Sbjct: 77  AASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYE 136

Query: 244 VSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHAN 303
            + +H AA +G +     IL    A  +I+  E   T LHLA +   VE  ++L+   A+
Sbjct: 137 ATAMHRAAAKGNLKM-IHILLYYKASTNIQDTEGN-TPLHLACDEERVEEAKLLVSQGAS 194

Query: 304 CNERNHKEQIPLHLAAKCQSVECMEMLL 331
               N +E+ PL +A        ++ ++
Sbjct: 195 IYIENKEEKTPLQVAKGGLG-LILKRMV 221

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.5 bits (187), Expect = 3e-16
 Identities = 44/190 (23%), Positives = 76/190 (40%), Gaps = 8/190 (4%)

Query: 282 LHLAAENGYVECLR-ILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNAS 340
           +   A +G +E L+  +L + +     +   +  LH A      E +E LL+ G  VN  
Sbjct: 7   VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66

Query: 341 DCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIM 400
           D    +PLH + S     +     LL  GA VNA +  G +P+H AA     +    L+ 
Sbjct: 67  DDAGWSPLHIAASAGRDEIVKA--LLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLE 124

Query: 401 HGADISSKTPSGSSALSIIMRNTPSSISSVRKKLDSSISLQDPEASTKDIELKLN----- 455
            GA+  +K    ++A+          +  +     +S ++QD E +T             
Sbjct: 125 GGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEE 184

Query: 456 FKYILQNGPD 465
            K ++  G  
Sbjct: 185 AKLLVSQGAS 194

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.8 bits (128), Expect = 1e-08
 Identities = 34/146 (23%), Positives = 56/146 (38%), Gaps = 32/146 (21%)

Query: 123 TALLWCVFVKREDLLDALHQLGADL-SNDKYG--ALHLAAFNGSIKGCSWLMLHGHDINF 179
           T L +     R ++   L + GA+  + D Y   A+H AA  G++K    L+ +    N 
Sbjct: 105 TPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNI 164

Query: 180 T-KDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNV 238
              +  TPLH A     V+ AK L+   A                           +  +
Sbjct: 165 QDTEGNTPLHLACDEERVEEAKLLVSQGA---------------------------SIYI 197

Query: 239 LNNKGVSPLHIAADRGLISCLKAILD 264
            N +  +PL +A   GL   LK +++
Sbjct: 198 ENKEEKTPLQVAK-GGLGLILKRMVE 222

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 88.2 bits (217), Expect = 1e-19
 Identities = 49/251 (19%), Positives = 95/251 (37%), Gaps = 7/251 (2%)

Query: 120 EKTTALLWCVFVKREDLLDALHQLGADL---SNDKYGALHLAAFNGSIKGCSWLMLHGHD 176
           +     L        + +  L + GAD+   + D   ALH A  + ++    +L+ +G +
Sbjct: 39  DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGAN 98

Query: 177 INFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINP 236
           IN   +       A            + ++      +     +   +   + +  L  N 
Sbjct: 99  INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNE 158

Query: 237 NVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRI 296
                  +       +R ++   +  L+SG  +     K    TALH+AA  GY E L++
Sbjct: 159 VNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGG-TALHVAAAKGYTEVLKL 217

Query: 297 LLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNI 356
           L++   + N +++    PLH AA     E   +L+     + A +   +T    +  ++I
Sbjct: 218 LIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVA-DEDI 276

Query: 357 LSVHPLEILLK 367
           L    LE L K
Sbjct: 277 LGY--LEELQK 285

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 85.9 bits (211), Expect = 7e-19
 Identities = 47/249 (18%), Positives = 91/249 (36%), Gaps = 31/249 (12%)

Query: 212 TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVD 271
            +  +A S+   + V  LL    + N  N  G++ LH A     +  +K ++++G     
Sbjct: 42  AVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGA--NI 99

Query: 272 IKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEM-- 329
            +        LH AA  GY++    L+   A+    N +   PL +A +    E ++   
Sbjct: 100 NQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEV 159

Query: 330 -------------------------LLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEI 364
                                    L               T LH + +K    V    +
Sbjct: 160 NRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLK--L 217

Query: 365 LLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTP 424
           L++   +VN +D  G++P+H AA     +    L+ +  D+ +    G +A  +   +  
Sbjct: 218 LIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDIL 277

Query: 425 SSISSVRKK 433
             +  ++KK
Sbjct: 278 GYLEELQKK 286

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 59.7 bits (143), Expect = 4e-10
 Identities = 33/162 (20%), Positives = 56/162 (34%), Gaps = 11/162 (6%)

Query: 86  MKMSSGDVNVLYAIENSLYEPDEMATLFSKASQAEKTTALLWCVFVKREDLLDALHQLGA 145
              S GD  +  A E ++ E  +                    +       L++ H    
Sbjct: 134 AVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDV 193

Query: 146 DLSNDKYGALHLAAFNGSIKGCSWLMLHGHDIN-FTKDSYTPLHFAVLGNYVDCAKFLIK 204
             +     ALH+AA  G  +    L+   +D+N    D +TPLH A      +  + L++
Sbjct: 194 RHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVE 253

Query: 205 NKAHIH------ETIVHSAVSTNAVDCVQLLLSLQINPNVLN 240
           N   +       +T    A      D +  L  LQ   N+L+
Sbjct: 254 NLCDMEAVNKVGQTAFDVADE----DILGYLEELQKKQNLLH 291

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 82.9 bits (203), Expect = 5e-18
 Identities = 42/280 (15%), Positives = 97/280 (34%), Gaps = 33/280 (11%)

Query: 155 LHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIV 214
           LH  A  GS      +     +I   + + T LH+    +  + ++ LI ++A       
Sbjct: 6   LHTEA-AGSYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEA------- 57

Query: 215 HSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKT 274
                       +  ++   + N ++    +PL +A        +  ++ +G        
Sbjct: 58  ------------KECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNK 105

Query: 275 KERRVTALHLAAENGYV-ECLRILLENHANCNERNHKEQIPLHLAAKCQSVEC------- 326
            ER       A  +  +   +    +   +  E +      L + A  +  +        
Sbjct: 106 SERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLL 165

Query: 327 ----MEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSP 382
                ++     ++ ++     RT LH + ++         ++ + G+N + +D  G +P
Sbjct: 166 VEKGAKVDYDGAARKDSEKYKGRTALHYA-AQVSNMPIVKYLVGEKGSNKDKQDEDGKTP 224

Query: 383 IHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRN 422
           I +AA     + V  LI  GA + +   +  +A  +   N
Sbjct: 225 IMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQAN 264

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 79.8 bits (195), Expect = 6e-17
 Identities = 42/263 (15%), Positives = 86/263 (32%), Gaps = 65/263 (24%)

Query: 134 EDLLDALHQLGADLSNDKYG--ALHLAAFNGSIKGCSWLMLH--------GHDINFT-KD 182
             + + + +   ++ + ++    LH  A N S +    L++H        G D+N    D
Sbjct: 14  YAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCD 73

Query: 183 SYTPLHFAVLGNYVDCAKFLIKNKAHIHETI------VHSAVSTNAVDCVQLLLSL---- 232
             TPL  AVL        +L+K  A            +H A +      +  +L+     
Sbjct: 74  ENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLK 133

Query: 233 -------------------------------------------QINPNVLNNKGVSPLHI 249
                                                          +    KG + LH 
Sbjct: 134 GDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHY 193

Query: 250 AADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNH 309
           AA    +  +K ++    ++ D + ++ + T + LAA+ G +E +  L++  A+    + 
Sbjct: 194 AAQVSNMPIVKYLVGEKGSNKDKQDEDGK-TPIMLAAQEGRIEVVMYLIQQGASVEAVDA 252

Query: 310 KEQIPLHLAAKCQSVECMEMLLR 332
            +     LA        +++  R
Sbjct: 253 TDHTARQLAQANNHHNIVDIFDR 275

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 48.6 bits (114), Expect = 1e-06
 Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 8/88 (9%)

Query: 154 ALHLAAFNGSIKGCSWLMLHGHDINFTKDSY--TPLHFAVLGNYVDCAKFLIKNKAHIH- 210
           ALH AA   ++    +L+         +D    TP+  A     ++   +LI+  A +  
Sbjct: 190 ALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEA 249

Query: 211 -----ETIVHSAVSTNAVDCVQLLLSLQ 233
                 T    A + N  + V +    +
Sbjct: 250 VDATDHTARQLAQANNHHNIVDIFDRCR 277

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 83.8 bits (206), Expect = 7e-18
 Identities = 36/288 (12%), Positives = 77/288 (26%), Gaps = 42/288 (14%)

Query: 177 INFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIH-----------------ETIVHSAVS 219
           +  +      +      N     + L    AH +                 E I   A  
Sbjct: 40  MTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAI 99

Query: 220 ---TNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKE 276
              ++A+D + LLL+      V+  +      +AA+ G +  L  + +    ++    + 
Sbjct: 100 TGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQA 159

Query: 277 RRVTALHLAAENGYVECLRILLENHANCNE---RNHKEQIPLHLAAKCQSVECMEMLLRK 333
               A  LAAENG++  L  L E          +          A        +  LL  
Sbjct: 160 ENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDC 219

Query: 334 GSQVNASDCDNRTPLHASLSKNILSVH----PLEILLKWGA----------NVNARDIFG 379
              +  ++          ++  I         +    K             +   +  + 
Sbjct: 220 PVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYM 279

Query: 380 YSPIHIAALSELSQCVDCLIMHGAD-----ISSKTPSGSSALSIIMRN 422
              +       L   +  L+           ++     +  L + +R 
Sbjct: 280 LRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRL 327

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 81.9 bits (201), Expect = 3e-17
 Identities = 41/371 (11%), Positives = 83/371 (22%), Gaps = 64/371 (17%)

Query: 53  VDNMRTDSLEETISDELSYKVCKESIRASLLEAMKMSSGDVNVLYAIENSLYEPDEMATL 112
           ++N   D     I   L   + +  I A+ L  M +S                 + +   
Sbjct: 7   IENYENDPQLRLIPWILWENLFQHFISANELSLMTLS---------------YKEAIHIF 51

Query: 113 FSKASQAEKTTALLWC----VFVKREDLLDALHQLGADLSNDKYGALHLAAFNG---SIK 165
                  E+   LL           + L    H+ G            +AA  G   ++ 
Sbjct: 52  LPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEV----ICFVAAITGCSSALD 107

Query: 166 GCSWLMLHGHDIN-FTKDSYTPLHFAVLGNYVDCAKFLIKNKA--------HIHETIVHS 216
               L+     +     ++Y     A    ++     L +             +      
Sbjct: 108 TLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRL 167

Query: 217 AVSTNAVDCVQLLLSLQINPN---VLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIK 273
           A     +  +  L  L        +      +    A  RG  + +  +LD  +      
Sbjct: 168 AAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV------ 221

Query: 274 TKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRK 333
                  A     E G       +  +     E +        L+      + +      
Sbjct: 222 ---MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMH----DAFKLSNPDGVFDLVT----- 269

Query: 334 GSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGA-----NVNARDIFGYSPIHIAAL 388
                         L     + +L    +  LL                     + +A  
Sbjct: 270 -KSECLQGFYMLRNLIRRNDEVLLDD--IRFLLSIPGIKALAPTATIPGDANELLRLALR 326

Query: 389 SELSQCVDCLI 399
                    L+
Sbjct: 327 LGNQGACALLL 337

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 70.7 bits (172), Expect = 1e-13
 Identities = 25/214 (11%), Positives = 63/214 (29%), Gaps = 19/214 (8%)

Query: 237 NVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRI 296
           N+ N +    L +       +  +  + +    + +    +    + L       +  ++
Sbjct: 6   NIENYENDPQLRLIPWILWENLFQHFISANELSL-MTLSYKEAIHIFLPGTKNMEQVRQL 64

Query: 297 LLENHANCN-----------ERNHKEQIPLHLAAKC---QSVECMEMLLRKGSQVNASDC 342
           L   +A+ N           ++  K ++   +AA      +++ + +LL     V     
Sbjct: 65  LCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQA 124

Query: 343 DNRTPLHASLSKNILSVHPLEILLKWGANVNARDI--FGYSPIHIAALSELSQCVDCLIM 400
           +N      +     L V  L  L +         I    Y    +AA +     ++ L  
Sbjct: 125 ENYQAFRLAAENGHLHV--LNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCE 182

Query: 401 HGADISSKTPSGSSALSIIMRNTPSSISSVRKKL 434
                ++      +  +           +V   L
Sbjct: 183 LAPTEATAMIQAENYYAFRWAAVGRGHHNVINFL 216

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 66.5 bits (161), Expect = 4e-12
 Identities = 22/188 (11%), Positives = 44/188 (23%), Gaps = 23/188 (12%)

Query: 123 TALLWCVFVKREDLLDALHQLGADL------SNDKYGALHLAAFNGSIKGCSWLMLHGHD 176
            A           +L+ L +L          + + Y     A   G     ++L+     
Sbjct: 163 HAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM 222

Query: 177 INFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHE--TIVHSAVSTNAVDCVQLLLSLQI 234
           +                       F+ ++   + E       +      D V        
Sbjct: 223 LA------YAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVT------K 270

Query: 235 NPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADV---DIKTKERRVTALHLAAENGYV 291
           +  +     +  L    D  L+  ++ +L                     L LA   G  
Sbjct: 271 SECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQ 330

Query: 292 ECLRILLE 299
               +LL 
Sbjct: 331 GACALLLS 338

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 39.1 bits (90), Expect = 0.002
 Identities = 15/110 (13%), Positives = 31/110 (28%), Gaps = 19/110 (17%)

Query: 141 HQLGADLSNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAK 200
                +   + + A  L+  +G        ++   +          L        +D  +
Sbjct: 242 IARHVNRLKEMHDAFKLSNPDGVFD-----LVTKSECLQGFYMLRNLIRRNDEVLLDDIR 296

Query: 201 FLIKNKAHI-----------HETIVHSAVSTNAVDCVQLLLSLQINPNVL 239
           FL+                    ++  A+         LLLS+   P+VL
Sbjct: 297 FLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSI---PSVL 343

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.4 bits (191), Expect = 8e-17
 Identities = 50/221 (22%), Positives = 96/221 (43%), Gaps = 16/221 (7%)

Query: 154 ALHLAAFNGSIKGCSWLM----LHGHDINFT-KDSYTPLHFAVLGNYVDCAKFLIKNKAH 208
            LH+A   G++     L+      G +++       TPLH AV+       + L+   A 
Sbjct: 6   PLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS 65

Query: 209 I------HETIVHSAVSTNAVDCVQLLLSL----QINPNVLNNKGVSPLHIAADRGLISC 258
                   +T  H A    +  C++ LL       ++    N  G++ LH+A +      
Sbjct: 66  PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQET 125

Query: 259 LKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLA 318
           ++ +L    AD+D    +   + L  A EN  +  +++LL++ AN N + +     LH A
Sbjct: 126 VQ-LLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSA 184

Query: 319 AKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSV 359
           +    +  +  L+R G+  +  +C N TPL  + S+ ++ +
Sbjct: 185 SGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDI 225

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.9 bits (182), Expect = 1e-15
 Identities = 56/227 (24%), Positives = 107/227 (47%), Gaps = 15/227 (6%)

Query: 182 DSYTPLHFAVLGNYVDCAKFLIKN----------KAHIHETIVHSAVSTNAVDCVQLLLS 231
           D  TPLH AV+   +     L+              ++ +T +H AV T     V+LL++
Sbjct: 2   DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT 61

Query: 232 LQINPNVLNNKGVSPLHIAADRGLISCLKAILDSG--MADVDIKTKERRVTALHLAAENG 289
              +P  L+  G +  H+A +    +CL+A+LDS               +TALH+A    
Sbjct: 62  AGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE 121

Query: 290 YVECLRILLENHANCNERNHKEQI-PLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPL 348
             E +++LLE  A+ +  + K    PL  A +  S+  +++LL+ G+ VNA      + L
Sbjct: 122 CQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSAL 181

Query: 349 HASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCV 395
           H++  + +L +  +  L++ GA+ + ++    +P+ +A    +   +
Sbjct: 182 HSASGRGLLPL--VRTLVRSGADSSLKNCHNDTPLMVARSRRVIDIL 226

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (155), Expect = 4e-12
 Identities = 40/224 (17%), Positives = 70/224 (31%), Gaps = 21/224 (9%)

Query: 123 TALLWCVFVKRED----LLDALHQLGADL---SNDKYGALHLAAFNGSIKGCSWLMLHGH 175
           T L   V          L++   Q G +L   +N +   LHLA           L+  G 
Sbjct: 5   TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGA 64

Query: 176 DINFTKDSYTPLHF-AVLGNYVDCAKFLIKNKAHIHET-----------IVHSAVSTNAV 223
                          A       C + L+ + A                +  +  +    
Sbjct: 65  SPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQE 124

Query: 224 DCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALH 283
               LL        V    G SPL  A +   +S ++ +L  G               LH
Sbjct: 125 TVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSA--LH 182

Query: 284 LAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECM 327
            A+  G +  +R L+ + A+ + +N     PL +A   + ++ +
Sbjct: 183 SASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDIL 226

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (121), Expect = 1e-07
 Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 8/120 (6%)

Query: 149 NDKYGALHLAAFNGSIKGCSWLMLHGHDINFTK--DSYTPLHFAVLGNYVDCAKFLIKNK 206
            D   ALH+A      +    L+  G DI+        +PL  AV  N +   + L+++ 
Sbjct: 108 YDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHG 167

Query: 207 AHIH------ETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLK 260
           A+++       + +HSA     +  V+ L+    + ++ N    +PL +A  R +I  L+
Sbjct: 168 ANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (96), Expect = 1e-04
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)

Query: 343 DNRTPLH-ASLSKNILSVHPL-EILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIM 400
           D  TPLH A +  N+ +VH L  +  + G  ++  +    +P+H+A ++ L   V  L+ 
Sbjct: 2   DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT 61

Query: 401 H 401
            
Sbjct: 62  A 62

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 77.9 bits (190), Expect = 1e-16
 Identities = 53/254 (20%), Positives = 89/254 (35%), Gaps = 31/254 (12%)

Query: 154 ALHLAAFNGSIKGCSWLMLHGHDINFTKDSY--TPLHFAVLGNYVDCAKFLIKNKAHIHE 211
            LH A           L+     +   KD     PLH++V     +   FL+    +++ 
Sbjct: 3   PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL 62

Query: 212 TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVD 271
                                                     G +  +K++ D  +    
Sbjct: 63  DDYPDDSGWTPFHIAC------------------------SVGNLEVVKSLYDRPLKPDL 98

Query: 272 IKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLL 331
            K   + VT LHLA    + E  + L+EN A+   ++   QIPLH AA   S++ +E+L 
Sbjct: 99  NKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLC 158

Query: 332 RKGSQ-VNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSE 390
             G   VN  D    TPL  +L++       L ++ K+GA  +  D  G     +A   +
Sbjct: 159 GLGKSAVNWQDKQGWTPLFHALAEGHGDAAVL-LVEKYGAEYDLVDNKGAKAEDVALNEQ 217

Query: 391 LSQCVDCLIMHGAD 404
                   + +  D
Sbjct: 218 ---VKKFFLNNVVD 228

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 76.4 bits (186), Expect = 4e-16
 Identities = 42/213 (19%), Positives = 69/213 (32%), Gaps = 6/213 (2%)

Query: 215 HSAVSTNAVDCVQLLLSLQ-INPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIK 273
           H A   N    VQ LL  +       +  G  PLH +           +L          
Sbjct: 5   HQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDD 64

Query: 274 TKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPL---HLAAKCQSVECMEML 330
             +         A +     +   L +     + N      +   HLA   +  E  + L
Sbjct: 65  YPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFL 124

Query: 331 LRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSE 390
           +  G+ V   D  N+ PLH + S   L +  L   L     VN +D  G++P+  A    
Sbjct: 125 IENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKS-AVNWQDKQGWTPLFHALAEG 183

Query: 391 LSQCVDCLIM-HGADISSKTPSGSSALSIIMRN 422
                  L+  +GA+       G+ A  + +  
Sbjct: 184 HGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE 216

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 70.6 bits (171), Expect = 4e-14
 Identities = 36/229 (15%), Positives = 73/229 (31%), Gaps = 21/229 (9%)

Query: 123 TALLWCVFVKREDLLDALHQLGADLSN--DKYG--ALHLAAFNGSIKGCSWLMLHGHDIN 178
             L           +  L      L    D+ G   LH +    + +  S+L+    ++N
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61

Query: 179 FTKDSYTPLHFAVLGNYV------------DCAKFLIKNKAHIHETIVHSAVSTNAVDCV 226
                                            K  +    +   T +H AV     +  
Sbjct: 62  LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 121

Query: 227 QLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAA 286
           Q L+    +  + +     PLH AA  G +  ++ +   G + V+ + K+   T L  A 
Sbjct: 122 QFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGW-TPLFHAL 180

Query: 287 ENGYVECLRILLENH-ANCNERNHKEQIPLHLAAKCQSVECMEMLLRKG 334
             G+ +   +L+E + A  +  ++K      +A    + +  +  L   
Sbjct: 181 AEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNNV 226

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.7 bits (96), Expect = 1e-04
 Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 3/58 (5%)

Query: 346 TPLH-ASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHG 402
            PLH A +      V   E+L    + +  +D  G  P+H +   +  +    L+   
Sbjct: 2   YPLHQACMENEFFKVQ--ELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKM 57

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 74.8 bits (182), Expect = 8e-16
 Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 9/205 (4%)

Query: 163 SIKGCSWLMLHGHDINFTKDSY--TPLHFAVLGNYVDCAKFLIKNKAHI------HETIV 214
           + +  S L+  G ++N T D    T LH A      D AK L+   A          T +
Sbjct: 1   TAQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPL 60

Query: 215 HSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKT 274
           H+AV+ +A+   Q+LL  +           +   I A R  I  +   L +  AD++   
Sbjct: 61  HAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAAD 120

Query: 275 KERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKG 334
              + TALH AA     E + ILL +HAN + ++ K++ PL LAA+  S E  + LL   
Sbjct: 121 NSGK-TALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNF 179

Query: 335 SQVNASDCDNRTPLHASLSKNILSV 359
           +    +D  +R P   +  +    +
Sbjct: 180 ANREITDHMDRLPRDVASERLHHDI 204

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 70.2 bits (170), Expect = 3e-14
 Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 14/207 (6%)

Query: 136 LLDALHQLGADL--SNDKYG--ALHLAAFNGSIKGCSWLMLHGHDINFTKDSYTPLHFAV 191
           ++  L   GA+L  + DK G  +LHLAA          L+  G D N   ++      A 
Sbjct: 4   VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAA 63

Query: 192 LGNYVDCAKFL--------IKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKG 243
           +         +        +  + H   T +  A        V+ L++   + N  +N G
Sbjct: 64  VAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSG 123

Query: 244 VSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHAN 303
            + LH AA       +  +     A+ D +  +   T L LAA  G  E  + LL+N AN
Sbjct: 124 KTALHWAAAVNNTEAVNIL-LMHHANRDAQDDKDE-TPLFLAAREGSYEASKALLDNFAN 181

Query: 304 CNERNHKEQIPLHLAAKCQSVECMEML 330
               +H +++P  +A++    + + +L
Sbjct: 182 REITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 67.1 bits (162), Expect = 4e-13
 Identities = 45/199 (22%), Positives = 75/199 (37%), Gaps = 4/199 (2%)

Query: 225 CVQLLLSLQINPNV-LNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALH 283
            +  LL+     N  ++  G + LH+AA        K  L    AD + +    R     
Sbjct: 4   VISDLLAQGAELNATMDKTGETSLHLAARFARADAAK-RLLDAGADANSQDNTGRTPLHA 62

Query: 284 LAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCD 343
             A +       +L     N N R H    PL LAA+      +E L+   + +NA+D  
Sbjct: 63  AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 122

Query: 344 NRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGA 403
            +T LH + + N      + ILL   AN +A+D    +P+ +AA     +    L+ + A
Sbjct: 123 GKTALHWAAAVNN--TEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFA 180

Query: 404 DISSKTPSGSSALSIIMRN 422
           +             +    
Sbjct: 181 NREITDHMDRLPRDVASER 199

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.8 bits (179), Expect = 3e-15
 Identities = 47/235 (20%), Positives = 79/235 (33%), Gaps = 30/235 (12%)

Query: 182 DSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNN 241
           D  + LH A++         +I+                        +       N  NN
Sbjct: 1   DGDSFLHLAIIHEEKALTMEVIR-----------------------QVKGDLAFLNFQNN 37

Query: 242 KGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVEC----LRIL 297
              +PLH+A         +A+L +G        +      L                   
Sbjct: 38  LQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTT 97

Query: 298 LENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDN-RTPLHASLSKNI 356
              H+     N+     LHLA+    +  +E+L+  G+ VNA +  N RT LH  L+ ++
Sbjct: 98  PHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALH--LAVDL 155

Query: 357 LSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPS 411
            +   + +LLK GA+VN     GYSP  +      ++    L     +     P 
Sbjct: 156 QNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPE 210

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.5 bits (160), Expect = 9e-13
 Identities = 37/198 (18%), Positives = 66/198 (33%), Gaps = 18/198 (9%)

Query: 154 ALHLAAFNGSIKGC----SWLMLHGHDINFT-KDSYTPLHFAVLGNYVDCAKFLIKNKAH 208
            LHLA  +            +      +NF      TPLH AV+ N  + A+ L+     
Sbjct: 5   FLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD 64

Query: 209 IHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVS------------PLHIAADRGLI 256
                       +       L S+ +         +              LH+A+  G +
Sbjct: 65  PELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYL 124

Query: 257 SCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLH 316
             ++ ++  G      +    R TALHLA +    + + +LL+  A+ N   ++   P  
Sbjct: 125 GIVELLVSLGADVNAQEPCNGR-TALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQ 183

Query: 317 LAAKCQSVECMEMLLRKG 334
           L     S    + L +  
Sbjct: 184 LTWGRPSTRIQQQLGQLT 201

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (127), Expect = 2e-08
 Identities = 44/215 (20%), Positives = 87/215 (40%), Gaps = 9/215 (4%)

Query: 243 GVSPLHIAADRGLISCLKAILD---SGMADVDIKTKERRVTALHLAAENGYVECLRILLE 299
           G S LH+A      +    ++      +A ++ +   ++ T LHLA      E    LL 
Sbjct: 2   GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQ-TPLHLAVITNQPEIAEALLG 60

Query: 300 NHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNIL-- 357
              +   R+ +   PLHLA +   +  + +L +  +  +       T  +     ++   
Sbjct: 61  AGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASI 120

Query: 358 --SVHPLEILLKWGANVNARDIF-GYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSS 414
              +  +E+L+  GA+VNA++   G + +H+A   +    V  L+  GAD++  T  G S
Sbjct: 121 HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYS 180

Query: 415 ALSIIMRNTPSSISSVRKKLDSSISLQDPEASTKD 449
              +      + I     +L        PE+  ++
Sbjct: 181 PYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEE 215

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (100), Expect = 4e-05
 Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 7/113 (6%)

Query: 167 CSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIH-------ETIVHSAVS 219
           C+   LH        + +T LH A +  Y+   + L+   A ++        T +H AV 
Sbjct: 95  CTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVD 154

Query: 220 TNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDI 272
               D V LLL    + N +  +G SP  +   R      + +    + ++ +
Sbjct: 155 LQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQM 207

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.8 bits (156), Expect = 8e-13
 Identities = 30/160 (18%), Positives = 67/160 (41%), Gaps = 5/160 (3%)

Query: 242 KGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENH 301
           +    L  AA RG +  ++ +L   +   D   +  +     +   +  +    +  +  
Sbjct: 1   RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELL--KQG 58

Query: 302 ANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHP 361
           A+ N ++     P+H AA+   ++ +++L+  G+ VN  D     P+H ++ +   +V  
Sbjct: 59  ASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVS 118

Query: 362 LEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMH 401
                   ++++ RD  G +P+ +A        VD L  H
Sbjct: 119 FLA---AESDLHRRDARGLTPLELALQRGAQDLVDILQGH 155

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (118), Expect = 1e-07
 Identities = 27/153 (17%), Positives = 53/153 (34%), Gaps = 10/153 (6%)

Query: 154 ALHLAAFNGSIKGCSWLML-HGHDIN------FTKDSYTPLHFAVLGNYVDCAKFLIKNK 206
            L  AA  G ++    L+       +       T           +   +         +
Sbjct: 5   RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQ 64

Query: 207 AHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSG 266
                + VH A  T  +D +++L+    + NV +  G  P+H+A   G  + +  +    
Sbjct: 65  DTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA-- 122

Query: 267 MADVDIKTKERRVTALHLAAENGYVECLRILLE 299
            +D+  +      T L LA + G  + + IL  
Sbjct: 123 ESDLHRRDARGL-TPLELALQRGAQDLVDILQG 154

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 56.5 bits (135), Expect = 5e-10
 Identities = 21/140 (15%), Positives = 52/140 (37%), Gaps = 11/140 (7%)

Query: 278 RVTALHLAAENGYVECLRILLENHANCNER------NHKEQIPLHLAAKCQ---SVECME 328
           ++ +L  A +   +  L     +  +  E+      +  ++  LHLA +     S+  ++
Sbjct: 6   KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVD 65

Query: 329 MLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAAL 388
            L++    ++       T LH     +      L +  +  A++   +  G +P+ IA  
Sbjct: 66  FLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLL--RGKASIEIANESGETPLDIAKR 123

Query: 389 SELSQCVDCLIMHGADISSK 408
            +   C + L    +   + 
Sbjct: 124 LKHEHCEELLTQALSGRFNS 143

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.4 bits (132), Expect = 1e-09
 Identities = 30/140 (21%), Positives = 52/140 (37%), Gaps = 11/140 (7%)

Query: 240 NNKGVSPLHIAADRGLISCLKAILDSGMADVDIK-----TKERRVTALHLAAEN---GYV 291
               +  L  A     I  L      G  D+  K       E   TALHLA  +     +
Sbjct: 3   TAAKLHSLCEAVKTRDIFGLLQAYADG-VDLTEKIPLANGHEPDETALHLAVRSVDRTSL 61

Query: 292 ECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHAS 351
             +  L++N  N +++  K    LH      + EC+++LLR  + +  ++    TPL  +
Sbjct: 62  HIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIA 121

Query: 352 LSKNILSVHPLEILLKWGAN 371
                      E+L +  + 
Sbjct: 122 KRLKHEHC--EELLTQALSG 139

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.7 bits (107), Expect = 3e-06
 Identities = 30/143 (20%), Positives = 49/143 (34%), Gaps = 13/143 (9%)

Query: 81  SLLEAMKMSSGDVN-VLYAIENSLYEPDEMATLFSKASQAEKTTALLWCVFVKRE---DL 136
           SL EA+K  + D+  +L A  + +   D    +          TAL   V         +
Sbjct: 9   SLCEAVK--TRDIFGLLQAYADGV---DLTEKIPLANGHEPDETALHLAVRSVDRTSLHI 63

Query: 137 LDALHQLGADLSN---DKYGALHLAAFNGSIKGCSWLMLHGHDIN-FTKDSYTPLHFAVL 192
           +D L Q   +L         ALH      + +    L+     I    +   TPL  A  
Sbjct: 64  VDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKR 123

Query: 193 GNYVDCAKFLIKNKAHIHETIVH 215
             +  C + L +  +    + VH
Sbjct: 124 LKHEHCEELLTQALSGRFNSHVH 146

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.0 bits (105), Expect = 6e-06
 Identities = 23/160 (14%), Positives = 45/160 (28%), Gaps = 39/160 (24%)

Query: 154 ALHLAAFNGSIKGCSWLMLHGHDIN-------FTKDSYTPLHFAVL---GNYVDCAKFLI 203
           +L  A     I G       G D+          +   T LH AV       +    FL+
Sbjct: 9   SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLV 68

Query: 204 KNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAIL 263
           +N  ++ +     + + +                                   +    +L
Sbjct: 69  QNSGNLDKQTGKGSTALHYCCLTD----------------------------NAECLKLL 100

Query: 264 DSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHAN 303
             G A ++I  +    T L +A    +  C  +L +  + 
Sbjct: 101 LRGKASIEIANESGE-TPLDIAKRLKHEHCEELLTQALSG 139

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.0 bits (100), Expect = 2e-05
 Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 7/116 (6%)

Query: 314 PLHLAAKCQSVECMEMLLRKGSQVNAS------DCDNRTPLH-ASLSKNILSVHPLEILL 366
            L  A K + +  +      G  +            + T LH A  S +  S+H ++ L+
Sbjct: 9   SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLV 68

Query: 367 KWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRN 422
           +   N++ +   G + +H   L++ ++C+  L+   A I     SG + L I  R 
Sbjct: 69  QNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRL 124

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (129), Expect = 3e-09
 Identities = 34/156 (21%), Positives = 65/156 (41%), Gaps = 8/156 (5%)

Query: 152 YG-ALHLAAFNGSIKGCSWLMLHGHDIN------FTKDSYTPLHFAVLGNYVDCAKFLIK 204
           +G  L  AA  G ++  + L+ +  ++N       T      L    +   +        
Sbjct: 1   WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPD 60

Query: 205 NKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILD 264
            K      ++H A     +D +Q LL  Q + N+ +N+G  PLH+AA  G +  ++ ++ 
Sbjct: 61  LKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVK 120

Query: 265 SGMADVDIKTKERRVTALHLAAENGYVECLRILLEN 300
              ++V  +  +   TA  LA   G  E + ++  N
Sbjct: 121 HTASNVGHRNHKGD-TACDLARLYGRNEVVSLMQAN 155

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.6 bits (124), Expect = 1e-08
 Identities = 21/158 (13%), Positives = 47/158 (29%), Gaps = 4/158 (2%)

Query: 245 SPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANC 304
           + L  AA RG +  L ++L +   +V+ +    R               +   L      
Sbjct: 3   NELASAAARGDLEQLTSLLQNN-VNVNAQNGFGRTALQV---MKLGNPEIARRLLLRGAN 58

Query: 305 NERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEI 364
            +   +    +   A           L +       + +         +K         +
Sbjct: 59  PDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFL 118

Query: 365 LLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHG 402
           +    +NV  R+  G +   +A L   ++ V  +  +G
Sbjct: 119 VKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (106), Expect = 3e-06
 Identities = 30/155 (19%), Positives = 57/155 (36%), Gaps = 6/155 (3%)

Query: 185 TPLHFAVLGNYVDCAKFLIKNKAHIHET-----IVHSAVSTNAVDCVQLLLSLQINPNVL 239
             L  A     ++    L++N  +++            +     +  + LL    NP++ 
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62

Query: 240 NNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLE 299
           +  G + +H AA  G +  L+ +     ADV+I+  E  +     A E        ++  
Sbjct: 63  DRTGFAVIHDAARAGFLDTLQTL-LEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKH 121

Query: 300 NHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKG 334
             +N   RNHK      LA      E + ++   G
Sbjct: 122 TASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.3 bits (126), Expect = 7e-09
 Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 3/143 (2%)

Query: 280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNA 339
             L  AA  G  + +RIL+ N A               A          +L    S+   
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63

Query: 340 SDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLI 399
           +  D      A+   +   V  L      GA+VNA+D+   + +H A      + V+ LI
Sbjct: 64  TKVDRTPLHMAASEGHANIVEVLLK---HGADVNAKDMLKMTALHWATEHNHQEVVELLI 120

Query: 400 MHGADISSKTPSGSSALSIIMRN 422
            +GAD+ +++    +A  I + N
Sbjct: 121 KYGADVHTQSKFCKTAFDISIDN 143

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.5 bits (111), Expect = 8e-07
 Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 5/153 (3%)

Query: 246 PLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCN 305
            L  AA  G    ++ ++ +G       T     + LHLAA+ G+     +LL    + +
Sbjct: 5   KLLEAARAGQDDEVRILMANG---APFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD 61

Query: 306 ERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEIL 365
            R   ++ PLH+AA       +E+LL+ G+ VNA D    T LH +   N   V  +E+L
Sbjct: 62  ARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEV--VELL 119

Query: 366 LKWGANVNARDIFGYSPIHIAALSELSQCVDCL 398
           +K+GA+V+ +  F  +   I+  +      + L
Sbjct: 120 IKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.2 bits (110), Expect = 9e-07
 Identities = 21/152 (13%), Positives = 52/152 (34%), Gaps = 3/152 (1%)

Query: 182 DSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNN 241
           D    L  A      D  + L+ N A      + ++    A        +  +    ++ 
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR 60

Query: 242 KGVSPLHIAADRGLISCLKAILDSGMADV---DIKTKERRVTALHLAAENGYVECLRILL 298
              + +         S   A +   +             ++TALH A E+ + E + +L+
Sbjct: 61  DARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLI 120

Query: 299 ENHANCNERNHKEQIPLHLAAKCQSVECMEML 330
           +  A+ + ++   +    ++    + +  E+L
Sbjct: 121 KYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.4 bits (95), Expect = 1e-04
 Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 9/147 (6%)

Query: 123 TALLWCVFVKREDLLDALHQLGADLSNDKYG---ALHLAAFNGSIKGCSWLMLHGHDINF 179
             LL      ++D +  L   GA  + D  G       A +         L         
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63

Query: 180 TKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVH------SAVSTNAVDCVQLLLSLQ 233
           TK   TPLH A    + +  + L+K+ A ++   +        A   N  + V+LL+   
Sbjct: 64  TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123

Query: 234 INPNVLNNKGVSPLHIAADRGLISCLK 260
            + +  +    +   I+ D G     +
Sbjct: 124 ADVHTQSKFCKTAFDISIDNGNEDLAE 150

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.9 bits (86), Expect = 0.001
 Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 3/141 (2%)

Query: 215 HSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKT 274
             A      D V++L++        +  G SPLH+AA           +           
Sbjct: 7   LEAARAGQDDEVRILMANGAPFTT-DWLGTSPLHLAAQY--GHFSTTEVLLRAGVSRDAR 63

Query: 275 KERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKG 334
            +   T LH+AA  G+   + +LL++ A+ N ++  +   LH A +    E +E+L++ G
Sbjct: 64  TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123

Query: 335 SQVNASDCDNRTPLHASLSKN 355
           + V+      +T    S+   
Sbjct: 124 ADVHTQSKFCKTAFDISIDNG 144

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.0 bits (123), Expect = 1e-08
 Identities = 29/129 (22%), Positives = 52/129 (40%), Gaps = 5/129 (3%)

Query: 280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNA 339
             L  ++  G  + ++ ++    + +  N +    LH A      E ++ L++ G  VNA
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 340 SDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGY---SPIHIAALSELSQCVD 396
           +D D  TPLH + S N + V   + L++ GA V A         +          +QC  
Sbjct: 63  ADSDGWTPLHCAASCNNVQVC--KFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQ 120

Query: 397 CLIMHGADI 405
            L      +
Sbjct: 121 FLYGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (112), Expect = 4e-07
 Identities = 31/127 (24%), Positives = 49/127 (38%), Gaps = 9/127 (7%)

Query: 185 TPLHFAVLGNYVDCAKFLIKNKAHI------HETIVHSAVSTNAVDCVQLLLSLQINPNV 238
             L  + L    D  + +I              T +H+AV     + V+ L+   +N N 
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 239 LNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHL--AAENGYVECLRI 296
            ++ G +PLH AA    +   K +++SG A V   T     TA       E GY +C + 
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESG-AAVFAMTYSDMQTAADKCEEMEEGYTQCSQF 121

Query: 297 LLENHAN 303
           L      
Sbjct: 122 LYGVQEK 128

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (87), Expect = 0.001
 Identities = 22/108 (20%), Positives = 46/108 (42%), Gaps = 3/108 (2%)

Query: 314 PLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVN 373
            L  ++     + ++ ++ +    +  + +  T LH ++      +    +  ++G NVN
Sbjct: 4   LLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLV--QFGVNVN 61

Query: 374 ARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPS-GSSALSIIM 420
           A D  G++P+H AA     Q    L+  GA + + T S   +A     
Sbjct: 62  AADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCE 109

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (115), Expect = 1e-07
 Identities = 26/124 (20%), Positives = 41/124 (33%), Gaps = 2/124 (1%)

Query: 276 ERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGS 335
           E     L  AA  G VE +R LLE  AN N  N   + P+ +     +     +      
Sbjct: 1   EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELL--LLHG 58

Query: 336 QVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCV 395
                            +     +  L +L + GA ++ RD +G  P+ +A         
Sbjct: 59  AEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVA 118

Query: 396 DCLI 399
             L 
Sbjct: 119 RYLR 122

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (96), Expect = 4e-05
 Identities = 14/121 (11%), Positives = 34/121 (28%), Gaps = 4/121 (3%)

Query: 183 SYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNK 242
           S   L  A     V+  + L++  A+ +    +       +      ++  +  +     
Sbjct: 3   SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62

Query: 243 GVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRV----TALHLAAENGYVECLRILL 298
              P  +       +    +    +        + R       + LA E G+ +  R L 
Sbjct: 63  CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122

Query: 299 E 299
            
Sbjct: 123 A 123

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (85), Expect = 0.001
 Identities = 18/119 (15%), Positives = 34/119 (28%), Gaps = 7/119 (5%)

Query: 154 ALHLAAFNGSIKGCSWLMLHGHDIN-------FTKDSYTPLHFAVLGNYVDCAKFLIKNK 206
            L  AA  G ++    L+  G + N                   V    +          
Sbjct: 6   WLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCAD 65

Query: 207 AHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDS 265
                  VH A     +D + +L       +V +  G  P+ +A + G     + +  +
Sbjct: 66  PATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAA 124

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 42.6 bits (98), Expect = 2e-05
 Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 6/120 (5%)

Query: 280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNA 339
                A +NG ++ ++  +    + N      + PLH AA C  +E +E LL KG+ +NA
Sbjct: 4   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63

Query: 340 SDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLI 399
            D  + TPL +++ +  +S    ++LL  GA+   +   G + +        +Q +  L+
Sbjct: 64  PDKHHITPLLSAVYEGHVSCV--KLLLSKGADKTVKGPDGLTALEATD----NQAIKALL 117

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	854
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	100.0
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	100.0
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	100.0
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	100.0
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.98
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.98
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.97
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.97
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.97
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.97
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.95
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.95
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.95
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.94
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.93
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.92
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.91
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.91
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.9
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.89
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.89
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.89
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.87
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.87
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.85
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.85
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.83
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.83
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.83
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.82
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.79
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.76
d1r3jc_	103	Potassium channel protein {Streptomyces coelicolor	84.7

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-45  Score=403.49  Aligned_cols=310  Identities=30%  Similarity=0.414  Sum_probs=250.9

Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCCCCCC---CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHhCCCHHH
Q psy817          123 TALLWCVFVKREDLLDALHQLGADLSN---DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGNYVDC  198 (854)
Q Consensus       123 t~L~~Aa~~g~~~iv~~Ll~~g~~~~~---~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~~~~~i  198 (854)
                      ||||.||..|+.++|++|+++|+++|.   .|.||||+||..|+.++|++|+++|++++..+ +|.||||+|+..|+.++
T Consensus         2 TpL~~Aa~~g~~~~v~~Ll~~g~~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~~~~g~t~L~~A~~~g~~~~   81 (408)
T d1n11a_           2 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNM   81 (408)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHH
T ss_pred             ChHHHHHHCcCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence            677777777777777777777776654   56777777777777777777777777776554 46777777777777777


Q ss_pred             HHHHHhCCCCC---------------------------------------CchHHHHHHHcCCHHHHHHHHHCCCCCCCC
Q psy817          199 AKFLIKNKAHI---------------------------------------HETIVHSAVSTNAVDCVQLLLSLQINPNVL  239 (854)
Q Consensus       199 v~~Ll~~~~~~---------------------------------------~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~  239 (854)
                      +++|+..+++.                                       +.++++.|+..++.++++.|+++|++++..
T Consensus        82 ~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~  161 (408)
T d1n11a_          82 VKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAA  161 (408)
T ss_dssp             HHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred             HHHHHHhhhccccccccccchhhhhhhhcccccccccccccccccccccccchHHHHHHHcCCHHHHHHHHHcCCCCCcC
Confidence            77766554432                                       346667777777777777777777777777


Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccc--------------------------------cCCcCcHHHHHHH
Q psy817          240 NNKGVSPLHIAADRGLISCLKAILDSGMADVDIKT--------------------------------KERRVTALHLAAE  287 (854)
Q Consensus       240 d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~--------------------------------~~~~~t~L~~A~~  287 (854)
                      +.+|.+|||+|+..|+.+++++|++++ ++++..+                                ...+.|||+.|+.
T Consensus       162 ~~~~~~~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~  240 (408)
T d1n11a_         162 GKNGLTPLHVAVHHNNLDIVKLLLPRG-GSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQ  240 (408)
T ss_dssp             CSSCCCHHHHHHHTTCHHHHHHHGGGT-CCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred             CCcCchHHHHHHHcCCHHHHHHHHhcC-CcccccCCCCCCcchhhhccchhhhhhhhhhccccccccCCCCCCHHHHHHH
Confidence            777777777777777777777776664 4443221                                2345689999999


Q ss_pred             cCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHh
Q psy817          288 NGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLK  367 (854)
Q Consensus       288 ~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~  367 (854)
                      .++.++++.+.+.+...+..+..|.||++.|+..++.+++++|+++|++++..+..+.||||.++..+  ..++++.+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~t~L~~~~~~~--~~~~~~~ll~  318 (408)
T d1n11a_         241 EGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYG--NIKLVKFLLQ  318 (408)
T ss_dssp             TTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSS--CSHHHHHHHH
T ss_pred             hCcHhHhhhhhccccccccccCCCCChhhhhhhcCcHHHHHHHHHCCCccccccccccccchhhcccC--cceeeeeecc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999  7788999999


Q ss_pred             CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHHhhhhcC
Q psy817          368 WGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRKKLD  435 (854)
Q Consensus       368 ~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~  435 (854)
                      .|+++|.+|.+|+||||+|+++|+.++|++|+++|||++.+|.+|.|||++|+++++.++++++..+-
T Consensus       319 ~g~~in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~~d~~G~t~L~~A~~~~~~~iv~~L~~~~  386 (408)
T d1n11a_         319 HQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVT  386 (408)
T ss_dssp             TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred             ccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999888775543

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-39  Score=357.32  Aligned_cols=315  Identities=26%  Similarity=0.328  Sum_probs=258.7

Q ss_pred             HHHHHHHhcCCChHHHHHHHcCCCChhHHHHHhhhcccccCCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCccHHHH
Q psy817           81 SLLEAMKMSSGDVNVLYAIENSLYEPDEMATLFSKASQAEKTTALLWCVFVKREDLLDALHQLGADLSN---DKYGALHL  157 (854)
Q Consensus        81 ~l~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~---~g~t~L~~  157 (854)
                      ||+.|+  ..|+..+++.+.....++        +..|..|+||||+|+..|+.+++++|+++|+++|.   +|.||||+
T Consensus         3 pL~~Aa--~~g~~~~v~~Ll~~g~~i--------n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~~~~g~t~L~~   72 (408)
T d1n11a_           3 PLHVAS--FMGHLPIVKNLLQRGASP--------NVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHC   72 (408)
T ss_dssp             HHHHHH--HHTCHHHHHHHHHTTCCS--------CCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHH
T ss_pred             hHHHHH--HCcCHHHHHHHHHCCCCC--------CCCCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHH
Confidence            566555  456676665543333322        34677899999999999999999999999998865   88999999


Q ss_pred             HHHcCCHHHHHHHHhCCCCcc---------------------------------c-cCCCccHHHHHHhCCCHHHHHHHH
Q psy817          158 AAFNGSIKGCSWLMLHGHDIN---------------------------------F-TKDSYTPLHFAVLGNYVDCAKFLI  203 (854)
Q Consensus       158 A~~~g~~~iv~~Ll~~g~~~~---------------------------------~-~~~g~t~L~~A~~~~~~~iv~~Ll  203 (854)
                      |+..|+.+++++|++.+.+..                                 . +.++.++++.|+..++.+++++|+
T Consensus        73 A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll  152 (408)
T d1n11a_          73 AARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLL  152 (408)
T ss_dssp             HHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHhhhccccccccccchhhhhhhhcccccccccccccccccccccccchHHHHHHHcCCHHHHHHHH
Confidence            999999999999887655432                                 1 124678888899889999999998


Q ss_pred             hCCCCC------CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCC---------------------------------CCC
Q psy817          204 KNKAHI------HETIVHSAVSTNAVDCVQLLLSLQINPNVLNN---------------------------------KGV  244 (854)
Q Consensus       204 ~~~~~~------~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~---------------------------------~g~  244 (854)
                      ++|+++      |.+|||.|+..|+.+++++|+++|++++..+.                                 .|.
T Consensus       153 ~~~~~~~~~~~~~~~~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  232 (408)
T d1n11a_         153 ERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGV  232 (408)
T ss_dssp             HTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred             HcCCCCCcCCCcCchHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcchhhhccchhhhhhhhhhccccccccCCCCC
Confidence            888766      56789999999999999999888888776654                                 455


Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCH
Q psy817          245 SPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSV  324 (854)
Q Consensus       245 t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~  324 (854)
                      |||+.|+..++.++++.+.+.+ ...+..+ ..|.|||+.|+..++.+++++|+++|++++..+..+.|||+.|+..++.
T Consensus       233 t~l~~a~~~~~~~~~~~~~~~~-~~~~~~~-~~g~~~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~t~L~~~~~~~~~  310 (408)
T d1n11a_         233 TPLHLAAQEGHAEMVALLLSKQ-ANGNLGN-KSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNI  310 (408)
T ss_dssp             CHHHHHHHTTCHHHHHHHHTTT-CCTTCCC-TTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCS
T ss_pred             CHHHHHHHhCcHhHhhhhhccc-ccccccc-CCCCChhhhhhhcCcHHHHHHHHHCCCccccccccccccchhhcccCcc
Confidence            6666666677777777776654 5555544 4567999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHH---c
Q psy817          325 ECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIM---H  401 (854)
Q Consensus       325 ~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~---~  401 (854)
                      ++++.++++|+++|.+|.+|.||||.|++.|  +.+++++|+++|+|+|.+|.+|.||||+|++.|+.++|++|..   +
T Consensus       311 ~~~~~ll~~g~~in~~d~~G~T~Lh~A~~~g--~~~iv~~Ll~~GAd~n~~d~~G~t~L~~A~~~~~~~iv~~L~~~~~~  388 (408)
T d1n11a_         311 KLVKFLLQHQADVNAKTKLGYSPLHQAAQQG--HTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDE  388 (408)
T ss_dssp             HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT--CHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHCCC
T ss_pred             eeeeeeccccccccccCCCCCCHHHHHHHcC--CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999  8899999999999999999999999999999999999986643   4


Q ss_pred             CCCccccC
Q psy817          402 GADISSKT  409 (854)
Q Consensus       402 ga~~~~~~  409 (854)
                      +.+....+
T Consensus       389 ~~~~~~~~  396 (408)
T d1n11a_         389 TSFVLVSD  396 (408)
T ss_dssp             CSSCC---
T ss_pred             cccccccc
Confidence            55544433

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-34  Score=297.88  Aligned_cols=260  Identities=26%  Similarity=0.313  Sum_probs=186.1

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCCC----CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHhCCC
Q psy817          121 KTTALLWCVFVKREDLLDALHQLGADLSN----DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGNY  195 (854)
Q Consensus       121 ~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~----~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~~~  195 (854)
                      ++|+|++|+++|+.|+|++|+++|+++|.    .|+||||+|+..|+.+++++|+++|.+.+... .+.+|.+.|+..  
T Consensus         5 ~~~~L~~Ai~~~~~e~vk~Ll~~G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~~~~~~--   82 (285)
T d1wdya_           5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIA--   82 (285)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH--
T ss_pred             CcHHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCCCHHHHHHHcCCHHHhhhhccccccccccccccchhhHHHhhc--
Confidence            44566666666666666666666665543    35566666666666666666666555544333 244555555544  


Q ss_pred             HHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccc--
Q psy817          196 VDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIK--  273 (854)
Q Consensus       196 ~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~--  273 (854)
                                               +..+.....++...+....+..|.|+++.|+..|+...++.++... .+++..  
T Consensus        83 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~-~~~~~~~~  136 (285)
T d1wdya_          83 -------------------------GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRG-ANVNLRRK  136 (285)
T ss_dssp             -------------------------TCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTT-CCTTCCCC
T ss_pred             -------------------------CCccccchhhhhcccccccccCCCchhHHHHHhcchhhhhhhhhhc-cccccccc
Confidence                                     4455555555554444555566666666666666666666666543 333222  


Q ss_pred             -------ccCCcCcHHHHHHHcCCHHHHHHHHhc-CCCcCCCCCCCCCHHHHHHhc----CCHHHHHHHHhCCCCCCCcc
Q psy817          274 -------TKERRVTALHLAAENGYVECLRILLEN-HANCNERNHKEQIPLHLAAKC----QSVECMEMLLRKGSQVNASD  341 (854)
Q Consensus       274 -------~~~~~~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~----~~~~~v~~Ll~~g~~~~~~~  341 (854)
                             ....|.||||+|+++|+.+++++|+++ |++++..+..|.++...+...    +..+++++|+++|++++.++
T Consensus       137 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~  216 (285)
T d1wdya_         137 TKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRG  216 (285)
T ss_dssp             CCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCC
T ss_pred             chhhhhhhcccCchHHHHHHHcCCHHHHHHHHhccCCCcccccCCCCcccccccccccchHHHHHHHHHHHCCCCCCccC
Confidence                   123467899999999999999999865 788999999998888765533    34578999999999999999


Q ss_pred             CCCCcHHHHHHhcCCCChHHHHHHHh-CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Q psy817          342 CDNRTPLHASLSKNILSVHPLEILLK-WGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTP  410 (854)
Q Consensus       342 ~~g~t~L~~a~~~~~~~~~~v~~Ll~-~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~  410 (854)
                      ..|.||||.|+..+  +.+++++|++ .|+++|.+|.+|.||||+|++.|+.+++++|+++|||++.+|.
T Consensus       217 ~~g~t~L~~a~~~~--~~~~v~~lL~~~g~din~~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~d~  284 (285)
T d1wdya_         217 ERGKTPLILAVEKK--HLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL  284 (285)
T ss_dssp             TTSCCHHHHHHHTT--CHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred             CCCCCccchhhhcC--cHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccC
Confidence            99999999999998  7888999987 5899999999999999999999999999999999999998874

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.5e-34  Score=296.04  Aligned_cols=219  Identities=24%  Similarity=0.236  Sum_probs=175.8

Q ss_pred             ccccCCcHHHHHHHcCCHHHHHHHHHcCCCC------CCCCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHH
Q psy817          117 SQAEKTTALLWCVFVKREDLLDALHQLGADL------SNDKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHF  189 (854)
Q Consensus       117 ~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~------~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~  189 (854)
                      .+.+|+||||+||.+|+.+++++|+++|+++      |..|.||||+|+..|+.+++++|+++|++++..+ +|.||||+
T Consensus         5 i~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d~~g~tpL~~   84 (255)
T d1oy3d_           5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHL   84 (255)
T ss_dssp             CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHH
T ss_pred             CCcCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCcCCCCCCccchHHhhcccccccccccccccccccccccchhhhh
Confidence            3568999999999999999999999999874      2389999999999999999999999999999876 69999999


Q ss_pred             HHhCCCHHHHHHHHhCCCCCCc----------------hHHHHHHHcCC----HHHHHHHHHCCCCCCCCCCCCCcHHHH
Q psy817          190 AVLGNYVDCAKFLIKNKAHIHE----------------TIVHSAVSTNA----VDCVQLLLSLQINPNVLNNKGVSPLHI  249 (854)
Q Consensus       190 A~~~~~~~iv~~Ll~~~~~~~~----------------t~L~~A~~~~~----~~~v~~Ll~~g~~~~~~d~~g~t~L~~  249 (854)
                      |+..|+.+++++|++.+.....                +....+.....    ..........+.+++.+|..|.||||+
T Consensus        85 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh~  164 (255)
T d1oy3d_          85 ACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHV  164 (255)
T ss_dssp             HTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHH
T ss_pred             hhccCchHHHHHHHhhccchhcccchhhhhHHhhhcccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccCcccccc
Confidence            9999999999999987755410                00011111101    111111122366778888889999999


Q ss_pred             HHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHH
Q psy817          250 AADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEM  329 (854)
Q Consensus       250 A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~  329 (854)
                      |+..|+.+++++|++++ ++.+..++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++
T Consensus       165 A~~~~~~~~v~~Ll~~~-~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gadin~~d~~g~t~L~~A~~~~~~~i~~~  243 (255)
T d1oy3d_         165 AVIHKDAEMVRLLRDAG-ADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARL  243 (255)
T ss_dssp             HHHTTCHHHHHHHHHHT-CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHH
T ss_pred             cccccccccccchhccc-ccccccccccccccccccccccHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHH
Confidence            99999999999999886 66666666778899999999999999999999999999999999999999999999999999


Q ss_pred             HHhCCCC
Q psy817          330 LLRKGSQ  336 (854)
Q Consensus       330 Ll~~g~~  336 (854)
                      |+++||+
T Consensus       244 Ll~~Ga~  250 (255)
T d1oy3d_         244 LRAHGAP  250 (255)
T ss_dssp             HHHTTCC
T ss_pred             HHHcCCC
Confidence            9999986

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-33  Score=290.64  Aligned_cols=260  Identities=26%  Similarity=0.306  Sum_probs=177.7

Q ss_pred             CChHHHHHHHcCCCChhHHHHHhhhc------ccccCCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCccHHHHHHHc
Q psy817           91 GDVNVLYAIENSLYEPDEMATLFSKA------SQAEKTTALLWCVFVKREDLLDALHQLGADLSN---DKYGALHLAAFN  161 (854)
Q Consensus        91 g~~~l~~~~~~~~~~~~~~~~~~~~~------~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~---~g~t~L~~A~~~  161 (854)
                      +++.|.+|+.+|+.+  .+..++...      .+..|.||||+|+..|+.+++++|++.|.+.+.   .+.+|.+.|+..
T Consensus         5 ~~~~L~~Ai~~~~~e--~vk~Ll~~G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~~~~~~   82 (285)
T d1wdya_           5 DNHLLIKAVQNEDVD--LVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIA   82 (285)
T ss_dssp             HHHHHHHHHHTTCHH--HHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred             CcHHHHHHHHcCCHH--HHHHHHHCCCCcCccCCCCCCCHHHHHHHcCCHHHhhhhccccccccccccccchhhHHHhhc
Confidence            467899999999884  445554432      234689999999999999999999999988754   788999999999


Q ss_pred             CCHHHHHHHHhCCCCccccC-CCccHHHHHHhCCCHHHHHHHHhCCCCCC----chHHHHHHHcCCHHHHHHHHHCCCCC
Q psy817          162 GSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGNYVDCAKFLIKNKAHIH----ETIVHSAVSTNAVDCVQLLLSLQINP  236 (854)
Q Consensus       162 g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~----~t~L~~A~~~~~~~~v~~Ll~~g~~~  236 (854)
                      +..+...+.+++..+....+ .+.|+++.|+..|+...++.+++...+..    ....                     .
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~  141 (285)
T d1wdya_          83 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKED---------------------Q  141 (285)
T ss_dssp             TCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHH---------------------H
T ss_pred             CCccccchhhhhcccccccccCCCchhHHHHHhcchhhhhhhhhhcccccccccchhh---------------------h
Confidence            99999999999976655433 58999999999999999988888766541    0000                     0


Q ss_pred             CCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHc----CCHHHHHHHHhcCCCcCCCCCCCC
Q psy817          237 NVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAEN----GYVECLRILLENHANCNERNHKEQ  312 (854)
Q Consensus       237 ~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~----g~~~~v~~Ll~~~~~~~~~~~~g~  312 (854)
                      +..+..|.||||+|+..|+.+++++|+++.+++++..+.. |.++++.+...    +..+++++|+++|++++.++..|.
T Consensus       142 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~  220 (285)
T d1wdya_         142 ERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNM-GRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGK  220 (285)
T ss_dssp             HHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTT-SCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSC
T ss_pred             hhhcccCchHHHHHHHcCCHHHHHHHHhccCCCcccccCC-CCcccccccccccchHHHHHHHHHHHCCCCCCccCCCCC
Confidence            1123345666666666666666666666555555554432 23444433322    233566666666666666666666


Q ss_pred             CHHHHHHhcCCHHHHHHHHh-CCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCC
Q psy817          313 IPLHLAAKCQSVECMEMLLR-KGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARD  376 (854)
Q Consensus       313 t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d  376 (854)
                      ||||.|+..|+.+++++|++ .|++++..|.+|.||||.|+..+  +.+++++|+++|+|+|+.|
T Consensus       221 t~L~~a~~~~~~~~v~~lL~~~g~din~~d~~G~TpL~~A~~~~--~~eiv~~Ll~~GAd~n~~d  283 (285)
T d1wdya_         221 TPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELK--LKKIAELLCKRGASTDCGD  283 (285)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTT--CHHHHHHHHHHSSCSCCSS
T ss_pred             CccchhhhcCcHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcC--CHHHHHHHHHCCCCCCccc
Confidence            66666666666666666665 36666666666666666666666  5566666666666666655

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.6e-33  Score=287.35  Aligned_cols=229  Identities=23%  Similarity=0.238  Sum_probs=167.6

Q ss_pred             CCCCCccHHHHHHHcCCHHHHHHHHhCCCCccc---cC-CCccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCC
Q psy817          147 LSNDKYGALHLAAFNGSIKGCSWLMLHGHDINF---TK-DSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNA  222 (854)
Q Consensus       147 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~---~~-~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~  222 (854)
                      ++.+|.||||+||.+|+.+++++|+++|++++.   .+ +|.||||+                           |+..|+
T Consensus         5 i~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~---------------------------A~~~g~   57 (255)
T d1oy3d_           5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHL---------------------------AAILGE   57 (255)
T ss_dssp             CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHH---------------------------HHHHTC
T ss_pred             CCcCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCcCCCCCCccch---------------------------HHhhcc
Confidence            456778888888888888888888887777432   22 24455555                           555556


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccC--------CcCc---HHHHHHHc-CC
Q psy817          223 VDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKE--------RRVT---ALHLAAEN-GY  290 (854)
Q Consensus       223 ~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~--------~~~t---~L~~A~~~-g~  290 (854)
                      .+++++|+++|++++..|.+|.||||+|+..|+.++++.|++............        ...+   ++...... ..
T Consensus        58 ~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (255)
T d1oy3d_          58 ASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPE  137 (255)
T ss_dssp             HHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------
T ss_pred             cccccccccccccccccccccchhhhhhhccCchHHHHHHHhhccchhcccchhhhhHHhhhcccchHHHHHHHhhcchh
Confidence            666666666777888888889999999999999999998887652211100000        0001   11111111 11


Q ss_pred             HHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCC-ccCCCCcHHHHHHhcCCCChHHHHHHHhCC
Q psy817          291 VECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNA-SDCDNRTPLHASLSKNILSVHPLEILLKWG  369 (854)
Q Consensus       291 ~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g  369 (854)
                      ..........+.+++.++..|.||||+|+..|+.+++++|++++++.+. .+..|.||||.|+..+  +.+++++|+++|
T Consensus       138 ~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~--~~~~v~~Ll~~g  215 (255)
T d1oy3d_         138 NEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQ--AASVLELLLKAG  215 (255)
T ss_dssp             ------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT--CHHHHHHHHHTT
T ss_pred             HHHHHHhhhcCcccccccccCcccccccccccccccccchhccccccccccccccccccccccccc--HHHHHHHHHHCC
Confidence            2223333445677889999999999999999999999999999998875 4678999999999999  889999999999


Q ss_pred             CCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy817          370 ANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD  404 (854)
Q Consensus       370 ~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~  404 (854)
                      ++++.+|..|.||||+|+..++.+++++|+++||+
T Consensus       216 adin~~d~~g~t~L~~A~~~~~~~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         216 ADPTARMYGGRTPLGSALLRPNPILARLLRAHGAP  250 (255)
T ss_dssp             CCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCC
T ss_pred             CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999997

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-32  Score=275.18  Aligned_cols=215  Identities=24%  Similarity=0.310  Sum_probs=194.0

Q ss_pred             CchHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHc
Q psy817          210 HETIVHSAVSTNAVDCVQLLL-SLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAEN  288 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~  288 (854)
                      +.+.++.++..|+.+.|+.++ +.+.+++.+|..|+||||+|+..|+.+++++|+..+ ....... ..+.++++.|+..
T Consensus         3 ~~~~~~~~a~~G~~~~v~~~l~~~~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~-~~~~~~~-~~~~~~~~~~~~~   80 (223)
T d1uoha_           3 SNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLG-VPVNDKD-DAGWSPLHIAASA   80 (223)
T ss_dssp             SSSHHHHHHHTTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHT-CCSCCCC-TTCCCHHHHHHHH
T ss_pred             CHHHHHHHHHhCCHHHHHHHHHhCCCcCcCcCCCCCCHHHHHHHhhhhcccccccccc-ccccccc-ccccccccccccc
Confidence            567888899999988886665 557889999999999999999999999999999987 4444433 3456999999999


Q ss_pred             CCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhC
Q psy817          289 GYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKW  368 (854)
Q Consensus       289 g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~  368 (854)
                      |+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+..|.||||.|+..+  ..+++++|.+.
T Consensus        81 ~~~~i~~~Ll~~~~d~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~--~~~~~~~L~~~  158 (223)
T d1uoha_          81 GRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKG--NLKMIHILLYY  158 (223)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT--CHHHHHHHHHT
T ss_pred             cccchhHHHhccCceeEeeCCCCCchhhHHHHcCCHHHHHHHHHCCCCCCCcCCCCCccchhhhhcC--Ccchhhhhccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999  77889999999


Q ss_pred             CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHH
Q psy817          369 GANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISS  429 (854)
Q Consensus       369 g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~  429 (854)
                      |.+++.+|..|+||||+|+..|+.+++++|+++|+|++.+|..|+|||++|. .++..+.+
T Consensus       159 ~~~i~~~d~~g~TpL~~Aa~~g~~~~v~~LL~~Gad~~~~d~~g~tpl~~A~-~~~~~i~~  218 (223)
T d1uoha_         159 KASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAK-GGLGLILK  218 (223)
T ss_dssp             TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHCC-TTHHHHHH
T ss_pred             cceeeeccCCCCceeccccccCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHH-CCCHHHHh
Confidence            9999999999999999999999999999999999999999999999999884 45555443

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-32  Score=271.35  Aligned_cols=198  Identities=27%  Similarity=0.376  Sum_probs=109.4

Q ss_pred             ccHHHHHHHcCCHHHHHHHHh-CCCCccccC-CCccHHHHHHhCCCHHHHHHHHhCCCCC------CchHHHHHHHcCCH
Q psy817          152 YGALHLAAFNGSIKGCSWLML-HGHDINFTK-DSYTPLHFAVLGNYVDCAKFLIKNKAHI------HETIVHSAVSTNAV  223 (854)
Q Consensus       152 ~t~L~~A~~~g~~~iv~~Ll~-~g~~~~~~~-~g~t~L~~A~~~~~~~iv~~Ll~~~~~~------~~t~L~~A~~~~~~  223 (854)
                      .+.|+.+|..|+.+.|+.+++ ++.+++..+ +|+||||+|+..|+.+++++|++.+...      +.++++.|+..++.
T Consensus         4 ~~~~~~~a~~G~~~~v~~~l~~~~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
T d1uoha_           4 NLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRD   83 (223)
T ss_dssp             SSHHHHHHHTTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTCCCHHHHHHHHTCH
T ss_pred             HHHHHHHHHhCCHHHHHHHHHhCCCcCcCcCCCCCCHHHHHHHhhhhccccccccccccccccccccccccccccccccc
Confidence            345555666666555544443 334444433 3556666665555555555555544332      23444445555555


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCC
Q psy817          224 DCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHAN  303 (854)
Q Consensus       224 ~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~  303 (854)
                      +++++|+++|++++..|..|.||||+|+..|+.+++++|+++| ++++.++ ..|.||||+|+..|+.+++++|.+.+.+
T Consensus        84 ~i~~~Ll~~~~d~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g-~d~~~~~-~~~~t~L~~a~~~~~~~~~~~L~~~~~~  161 (223)
T d1uoha_          84 EIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG-ANPDAKD-HYEATAMHRAAAKGNLKMIHILLYYKAS  161 (223)
T ss_dssp             HHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             chhHHHhccCceeEeeCCCCCchhhHHHHcCCHHHHHHHHHCC-CCCCCcC-CCCCccchhhhhcCCcchhhhhccccce
Confidence            5555555555566666666666666666666666666666554 5555443 2344555555555555555555555555


Q ss_pred             cCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHH
Q psy817          304 CNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHAS  351 (854)
Q Consensus       304 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a  351 (854)
                      ++.+|..|.||||.|+..|+.+++++|+++|++++..|.+|+||||+|
T Consensus       162 i~~~d~~g~TpL~~Aa~~g~~~~v~~LL~~Gad~~~~d~~g~tpl~~A  209 (223)
T d1uoha_         162 TNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA  209 (223)
T ss_dssp             SCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHC
T ss_pred             eeeccCCCCceeccccccCcHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence            555555555555555555555555555555555555555555555544

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.98  E-value=2.6e-32  Score=286.85  Aligned_cols=237  Identities=25%  Similarity=0.321  Sum_probs=179.7

Q ss_pred             CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHhCCCHHHHHHHHhCCCCC------CchHHHHHHHcCC
Q psy817          150 DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGNYVDCAKFLIKNKAHI------HETIVHSAVSTNA  222 (854)
Q Consensus       150 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~~~~~iv~~Ll~~~~~~------~~t~L~~A~~~~~  222 (854)
                      +|.|||+.||..|+.++|++|+++|+|+|..+ +|.||||+|+.+|+.+++++|+++|++.      +.+||+.|+..++
T Consensus        39 ~~~t~l~~A~~~G~~~~v~~Ll~~Gadvn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~~L~~a~~~~~  118 (291)
T d1s70b_          39 DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGY  118 (291)
T ss_dssp             CHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred             CCchHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHhcCCceeeeeecccccccccccccccccccccccccc
Confidence            45688999999999999999999999988765 5899999999999999999999888765      6788999999999


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCC
Q psy817          223 VDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHA  302 (854)
Q Consensus       223 ~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~  302 (854)
                      .++++.|+++|++.+..|..|.+|+++|+..++.+.++.++...+.++.....        .............+.....
T Consensus       119 ~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~  190 (291)
T d1s70b_         119 LDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARK--------EEERIMLRDARQWLNSGHI  190 (291)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHH--------HHHHHHHHHHHHHHHHTCC
T ss_pred             cchhhcccccCcccccccccCccccccccccccchhccccccccccccccccc--------cccccccccchhhhccccc
Confidence            99999999999999999999999999999999999999998765333332111        1111111223334444455


Q ss_pred             CcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCH
Q psy817          303 NCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSP  382 (854)
Q Consensus       303 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~  382 (854)
                      +....+..|.||||.|+..|+.++++.|+++|+++|..+..|+||||+|+..|  +.+++++|+++|+|+|.+|..|.||
T Consensus       191 ~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~din~~~~~g~TpL~~A~~~g--~~~iv~lLl~~Gadv~~~d~~G~Ta  268 (291)
T d1s70b_         191 NDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWG--KEEACRILVENLCDMEAVNKVGQTA  268 (291)
T ss_dssp             CCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTT--CHHHHHHHHHTTCCTTCCCTTSCCT
T ss_pred             ccccccCCCCChhhHHHHcCChhhhcccccceecccccccCCCCHHHHHHHcC--CHHHHHHHHHCCCCCCCcCCCCCCH
Confidence            55666777888888888888888888888888877777777777777777777  6677777777777777777777777


Q ss_pred             HHHHHHcCCHHHHHHHHH
Q psy817          383 IHIAALSELSQCVDCLIM  400 (854)
Q Consensus       383 L~~A~~~~~~~~v~~Ll~  400 (854)
                      ||+|++    +++++|.+
T Consensus       269 L~~A~e----~~~~~L~~  282 (291)
T d1s70b_         269 FDVADE----DILGYLEE  282 (291)
T ss_dssp             TTSCCS----GGGHHHHH
T ss_pred             HHHHHH----HHHHHHHH
Confidence            777754    45555544

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.98  E-value=2e-31  Score=269.30  Aligned_cols=211  Identities=18%  Similarity=0.180  Sum_probs=176.4

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHc-CCCC---CCCCccHHHHHHHcCCHHHHHHHHhCCCCcccc----CCCccHHHHHHhC
Q psy817          122 TTALLWCVFVKREDLLDALHQL-GADL---SNDKYGALHLAAFNGSIKGCSWLMLHGHDINFT----KDSYTPLHFAVLG  193 (854)
Q Consensus       122 ~t~L~~Aa~~g~~~iv~~Ll~~-g~~~---~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~----~~g~t~L~~A~~~  193 (854)
                      ++|||+||..|+.+.++.|++. +.++   |.+|+||||+|+..|+.+++++|+++|++++..    ..|.+|+++|+..
T Consensus         1 n~pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~   80 (229)
T d1ixva_           1 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSV   80 (229)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCCHHHHHHHH
T ss_pred             CHhHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHcCCccccchhhhhhccccccccccccccccccccccc
Confidence            5899999999999999998875 4444   348999999999999999999999999998753    2488999999999


Q ss_pred             CCHHHHHHHHhCCCCC--------CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy817          194 NYVDCAKFLIKNKAHI--------HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDS  265 (854)
Q Consensus       194 ~~~~iv~~Ll~~~~~~--------~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~  265 (854)
                      +..++++.++..+...        +.++++.++..++.++++.|++.|.+.+..|..|.||||+|+..|+.++++.|++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~  160 (229)
T d1ixva_          81 GNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGL  160 (229)
T ss_dssp             TCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT
T ss_pred             cccccccccccccccccccccccccccccccccccchhhhhhhhhhhcccccccCCCCCCccchhhhccccccccccccc
Confidence            9999999988887654        56888888888888888888888888888888888888888888888888888888


Q ss_pred             CCCCccccccCCcCcHHHHHHHcCCHHHHHHHHh-cCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCC
Q psy817          266 GMADVDIKTKERRVTALHLAAENGYVECLRILLE-NHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQ  336 (854)
Q Consensus       266 ~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~  336 (854)
                      ++.+++.++ ..|.||||+|+.+|+.++|++|++ .|++++.+|..|.||||+|+.   .+++++|+++|+|
T Consensus       161 ~~~~in~~d-~~g~TpLh~A~~~~~~~~v~~Ll~~~gad~~~~d~~g~t~l~~A~~---~~~~~~Ll~~g~d  228 (229)
T d1ixva_         161 GKSAVNWQD-KQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKKFFLNNVVD  228 (229)
T ss_dssp             TCCCSCCCC-TTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCCCTTSCCTGGGCSC---HHHHHHHHHHCCC
T ss_pred             ccccccccc-cccCCchhhhcccccHHHHHHHHHhcCCCCCCcCCCCCCHHHHHhh---HHHHHHHHHcCCC
Confidence            767777665 456788888888888888888886 488888888888888888773   4788888888876

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.97  E-value=1.1e-31  Score=279.59  Aligned_cols=257  Identities=20%  Similarity=0.246  Sum_probs=149.8

Q ss_pred             cHHHHHHH-cCCHHHHHHHHhCCCCccccCCCccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHH
Q psy817          153 GALHLAAF-NGSIKGCSWLMLHGHDINFTKDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLS  231 (854)
Q Consensus       153 t~L~~A~~-~g~~~iv~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~  231 (854)
                      ||||+|+. .|+.++++.|.+.+++....++|+||||+|+.+|+.+++++|+.+..                   +.+++
T Consensus         2 ~p~~~~~~~~~~~~~~~~l~~~~~n~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~-------------------~~~l~   62 (277)
T d2fo1e1           2 SPIKLHTEAAGSYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEA-------------------KECIA   62 (277)
T ss_dssp             CCCHHHHHHHSSSCCCSCCSTTTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHH-------------------HHHHH
T ss_pred             ChHHHHHHhCCCHHHHHHHHhcCCCcCCCCCCccHHHHHHHcCCHHHHHHHHhcch-------------------hHHHH
Confidence            67775443 56777777777777776544468888888888888888887765422                   44555


Q ss_pred             CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcC---CCcCCCC
Q psy817          232 LQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENH---ANCNERN  308 (854)
Q Consensus       232 ~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~---~~~~~~~  308 (854)
                      +|+|+|.+|.+|.||||+|+.+|+.+++++|+++| ++++.++. .|.|||++|+..|+.++++.+...+   ..++..+
T Consensus        63 ~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~G-ad~n~~~~-~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~  140 (277)
T d2fo1e1          63 AGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAG-ADPTIYNK-SERSALHQAAANRDFGMMVYMLNSTKLKGDIEELD  140 (277)
T ss_dssp             TCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCT-TCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCC
T ss_pred             cCCCccccCCCCCeeeccccccccccccccccccc-cccccccc-cccccccchhhhcchhhhhhhhhcccccccccccc
Confidence            56666666666666666666666666666666654 55555432 3446666666666666666555432   2344455


Q ss_pred             CCCCCHHHHHHhcCCHH---HHHHHHhCCC--------CCCCccCCCCcHHHHHHhcCCCChHHHHH-HHhCCCCCccCC
Q psy817          309 HKEQIPLHLAAKCQSVE---CMEMLLRKGS--------QVNASDCDNRTPLHASLSKNILSVHPLEI-LLKWGANVNARD  376 (854)
Q Consensus       309 ~~g~t~L~~A~~~~~~~---~v~~Ll~~g~--------~~~~~~~~g~t~L~~a~~~~~~~~~~v~~-Ll~~g~d~n~~d  376 (854)
                      ..+.++.+.+...+..+   .++.+.++..        ..+..+..|.||||.++..+  +.+.++. +...+.+.+.+|
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~--~~~~~~~~l~~~~~~~~~~d  218 (277)
T d2fo1e1         141 RNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVS--NMPIVKYLVGEKGSNKDKQD  218 (277)
T ss_dssp             TTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSC--CHHHHHHHHHHSCCCTTCCC
T ss_pred             cccchhHHHHHhcccccccccccccccccccccccccccccccccCCCCccccccccc--cccccccccccccccccccC
Confidence            55556665555544322   2233322211        12334445666666666555  4444543 334555566666


Q ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHHhhh
Q psy817          377 IFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVRK  432 (854)
Q Consensus       377 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~  432 (854)
                      ..|.||||+|+..|+.+++++|+++|+|++.+|..|.|||++|+++++.++++++.
T Consensus       219 ~~g~tpL~~A~~~g~~~iv~~Ll~~gadin~~d~~G~T~L~~A~~~~~~~iv~lL~  274 (277)
T d2fo1e1         219 EDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFD  274 (277)
T ss_dssp             TTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHH
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence            66666666666666666666666666666666666666666666666655555444

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.97  E-value=2.2e-31  Score=277.45  Aligned_cols=249  Identities=23%  Similarity=0.297  Sum_probs=193.2

Q ss_pred             cHHHHHHH-cCCHHHHHHHHHcCCCCCC--CCccHHHHHHHcCCHHHHHHH--------HhCCCCccccC-CCccHHHHH
Q psy817          123 TALLWCVF-VKREDLLDALHQLGADLSN--DKYGALHLAAFNGSIKGCSWL--------MLHGHDINFTK-DSYTPLHFA  190 (854)
Q Consensus       123 t~L~~Aa~-~g~~~iv~~Ll~~g~~~~~--~g~t~L~~A~~~g~~~iv~~L--------l~~g~~~~~~~-~g~t~L~~A  190 (854)
                      ||||.|+. .|+.++++.|.+.+++...  +|+||||+||..|+.++|+.|        +++|+|+|..+ +|.||||+|
T Consensus         2 ~p~~~~~~~~~~~~~~~~l~~~~~n~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadvn~~d~~G~TpLh~A   81 (277)
T d2fo1e1           2 SPIKLHTEAAGSYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLA   81 (277)
T ss_dssp             CCCHHHHHHHSSSCCCSCCSTTTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHH
T ss_pred             ChHHHHHHhCCCHHHHHHHHhcCCCcCCCCCCccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCCccccCCCCCeeeccc
Confidence            67775444 5788888888888887744  699999999999999988776        56788888665 477777766


Q ss_pred             HhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCC--C
Q psy817          191 VLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGM--A  268 (854)
Q Consensus       191 ~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~--~  268 (854)
                      +.+|+.++                           |++|+++|+|++.+|.+|.|||+.|+..|+.++++.+.....  .
T Consensus        82 ~~~g~~~i---------------------------v~~Ll~~Gad~n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~  134 (277)
T d2fo1e1          82 VLARRRRL---------------------------VAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKG  134 (277)
T ss_dssp             HHHTCHHH---------------------------HHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHH
T ss_pred             cccccccc---------------------------cccccccccccccccccccccccchhhhcchhhhhhhhhcccccc
Confidence            66655444                           455555566778888888888888888888888888865431  1


Q ss_pred             CccccccCCcCcHHHHHHHcCCHH---HHHHHHhcC--------CCcCCCCCCCCCHHHHHHhcCCHHHHHHHH-hCCCC
Q psy817          269 DVDIKTKERRVTALHLAAENGYVE---CLRILLENH--------ANCNERNHKEQIPLHLAAKCQSVECMEMLL-RKGSQ  336 (854)
Q Consensus       269 ~~~~~~~~~~~t~L~~A~~~g~~~---~v~~Ll~~~--------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~  336 (854)
                      .++..+ ..+.++.+.+...+..+   .++.+.++.        ...+..+..|.||||.++..++.++++.++ ..+.+
T Consensus       135 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~  213 (277)
T d2fo1e1         135 DIEELD-RNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN  213 (277)
T ss_dssp             TTSCCC-TTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC
T ss_pred             cccccc-cccchhHHHHHhcccccccccccccccccccccccccccccccccCCCCcccccccccccccccccccccccc
Confidence            223222 34457888887776544   344444432        224556778999999999999999998755 67889


Q ss_pred             CCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q psy817          337 VNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMH  401 (854)
Q Consensus       337 ~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~  401 (854)
                      .+..|..|.||||.|+..|  +.+++++|+++|+|+|.+|..|.||||+|+++|+.++|++|++.
T Consensus       214 ~~~~d~~g~tpL~~A~~~g--~~~iv~~Ll~~gadin~~d~~G~T~L~~A~~~~~~~iv~lL~~c  276 (277)
T d2fo1e1         214 KDKQDEDGKTPIMLAAQEG--RIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRC  276 (277)
T ss_dssp             TTCCCTTCCCHHHHHHHHT--CHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred             ccccCCCCCCHHHHHHHcC--CHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence            9999999999999999999  88999999999999999999999999999999999999999863

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=2e-30  Score=261.80  Aligned_cols=224  Identities=26%  Similarity=0.332  Sum_probs=177.1

Q ss_pred             ccHHHHHHHcCCHHHHHHHHhC-CCCccccC-CCccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHH
Q psy817          152 YGALHLAAFNGSIKGCSWLMLH-GHDINFTK-DSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLL  229 (854)
Q Consensus       152 ~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~-~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~L  229 (854)
                      +||||+||.+|+.++++.|++. +.+++..+ +|.||||+|+..|+.+++++|+++|+++..                  
T Consensus         1 n~pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~------------------   62 (229)
T d1ixva_           1 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL------------------   62 (229)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCG------------------
T ss_pred             CHhHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHcCCccccchhhhhhccccc------------------
Confidence            4799999999999999988875 46666554 588888888887777777777766654310                  


Q ss_pred             HHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCC
Q psy817          230 LSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNH  309 (854)
Q Consensus       230 l~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~  309 (854)
                            .+..+..|.+|+|+|+..+..++++.++..+...........+.|+++.++..++.++++.|++.|.+.+..+.
T Consensus        63 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~  136 (229)
T d1ixva_          63 ------DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDK  136 (229)
T ss_dssp             ------GGCCCTTSCCHHHHHHHHTCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCT
T ss_pred             ------cccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhcccccccCC
Confidence                  12356678888888888888888888887652222222334566889999999999999999998888888888


Q ss_pred             CCCCHHHHHHhcCCHHHHHHHHhCC-CCCCCccCCCCcHHHHHHhcCCCChHHHHHHHh-CCCCCccCCCCCCCHHHHHH
Q psy817          310 KEQIPLHLAAKCQSVECMEMLLRKG-SQVNASDCDNRTPLHASLSKNILSVHPLEILLK-WGANVNARDIFGYSPIHIAA  387 (854)
Q Consensus       310 ~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~-~g~d~n~~d~~g~t~L~~A~  387 (854)
                      .|+||||+|+..|+.++++.|++.| .+++.+|.+|.||||+|+..+  +.+++++|++ .|+|++.+|..|.||||+|+
T Consensus       137 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~~--~~~~v~~Ll~~~gad~~~~d~~g~t~l~~A~  214 (229)
T d1ixva_         137 FNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEG--HGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL  214 (229)
T ss_dssp             TSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTT--CHHHHHHHHHHHCCCSCCCCTTSCCTGGGCS
T ss_pred             CCCCccchhhhcccccccccccccccccccccccccCCchhhhcccc--cHHHHHHHHHhcCCCCCCcCCCCCCHHHHHh
Confidence            8999999999999999999999886 577888888999999999888  7788998886 58899999999999999887


Q ss_pred             HcCCHHHHHHHHHcCCC
Q psy817          388 LSELSQCVDCLIMHGAD  404 (854)
Q Consensus       388 ~~~~~~~v~~Ll~~ga~  404 (854)
                      .   .+++++|+++|+|
T Consensus       215 ~---~~~~~~Ll~~g~d  228 (229)
T d1ixva_         215 N---EQVKKFFLNNVVD  228 (229)
T ss_dssp             C---HHHHHHHHHHCCC
T ss_pred             h---HHHHHHHHHcCCC
Confidence            3   5788999999886

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.97  E-value=3.4e-30  Score=270.46  Aligned_cols=206  Identities=22%  Similarity=0.293  Sum_probs=148.2

Q ss_pred             hHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCH
Q psy817          212 TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYV  291 (854)
Q Consensus       212 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~  291 (854)
                      |+|+.||..|+.++|++|+++|+|+|..|.+|.||||+|+.+|+.+++++|++++ .+.+... ..+.+||+.|+..|+.
T Consensus        42 t~l~~A~~~G~~~~v~~Ll~~Gadvn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~-~~~~~~~-~~~~~~L~~a~~~~~~  119 (291)
T d1s70b_          42 AVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENG-ANINQPD-NEGWIPLHAAASCGYL  119 (291)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTT-CCTTCCC-TTSCCHHHHHHHHTCH
T ss_pred             hHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHhcCCceeeeeecccc-ccccccc-cccccccccccccccc
Confidence            4555555555555555555555566666666666666666666666666666554 3433332 2334566666666666


Q ss_pred             HHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHh---------------------------CCCCCCCccCCC
Q psy817          292 ECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLR---------------------------KGSQVNASDCDN  344 (854)
Q Consensus       292 ~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---------------------------~g~~~~~~~~~g  344 (854)
                      ++++.|+++|+..+..+..|.+|+++|+..++.+.++.++.                           ...+....+..|
T Consensus       120 ~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  199 (291)
T d1s70b_         120 DIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSG  199 (291)
T ss_dssp             HHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTC
T ss_pred             chhhcccccCcccccccccCccccccccccccchhccccccccccccccccccccccccccchhhhcccccccccccCCC
Confidence            66666666666555556666666666665555555555543                           233445677889


Q ss_pred             CcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHh
Q psy817          345 RTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMR  421 (854)
Q Consensus       345 ~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~  421 (854)
                      .||||.|+..+  +.++++.|+++|+|+|.++..|.||||+|+..|+.++|++|+++|+|++.+|..|.|||++|++
T Consensus       200 ~t~L~~a~~~~--~~~~~~~Ll~~g~din~~~~~g~TpL~~A~~~g~~~iv~lLl~~Gadv~~~d~~G~TaL~~A~e  274 (291)
T d1s70b_         200 GTALHVAAAKG--YTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE  274 (291)
T ss_dssp             CCHHHHHHHHT--CHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS
T ss_pred             CChhhHHHHcC--ChhhhcccccceecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence            99999999999  8899999999999999999999999999999999999999999999999999999999999965

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.3e-27  Score=239.56  Aligned_cols=212  Identities=23%  Similarity=0.287  Sum_probs=109.3

Q ss_pred             cCCcHHHHHHHcCCHHHHHHHHH----cCCCCCC---CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHH
Q psy817          120 EKTTALLWCVFVKREDLLDALHQ----LGADLSN---DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAV  191 (854)
Q Consensus       120 ~~~t~L~~Aa~~g~~~iv~~Ll~----~g~~~~~---~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~  191 (854)
                      +|+||||+||..|+.++++.|++    .|+++|.   +|+||||+|+..|+.+++++|+++|++.+... +|.++++.|.
T Consensus         2 dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~a~   81 (228)
T d1k1aa_           2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLAC   81 (228)
T ss_dssp             TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHHHHHCCCCCCccCCCCCccceehhccccccccccccccccccccccccccccccccc
Confidence            35555555555555555555542    4554432   45555555555555555555555555554433 3455555555


Q ss_pred             hCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcc
Q psy817          192 LGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVD  271 (854)
Q Consensus       192 ~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~  271 (854)
                      ..++.++++.........                       ....+.....+.++|+.+.........+.|.... .+..
T Consensus        82 ~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~-~~~~  137 (228)
T d1k1aa_          82 EHRSPTCLRALLDSAAPG-----------------------TLDLEARNYDGLTALHVAVNTECQETVQLLLERG-ADID  137 (228)
T ss_dssp             HTTCHHHHHHHHHHSCTT-----------------------SCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTT
T ss_pred             ccccccchhhhhhccccc-----------------------cccccccccccccccccccccccchhhhhhhccc-cccc
Confidence            555554444443322211                       1112233344455555555555555555555443 2333


Q ss_pred             ccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHH
Q psy817          272 IKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHAS  351 (854)
Q Consensus       272 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a  351 (854)
                      ......+.++|+.|+..+..++++.++++|.+.+.+|..|.||||+|+.+|+.+++++|+++|+|++.+|.+|.||||+|
T Consensus       138 ~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~d~~G~TpL~~A  217 (228)
T d1k1aa_         138 AVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVA  217 (228)
T ss_dssp             CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTC
T ss_pred             cccccchhhHHHHHHHhhhhhhhhhhhhhccccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence            33333444555555555555555555555555555555555555555555555555555555555555555555555555


Q ss_pred             HhcC
Q psy817          352 LSKN  355 (854)
Q Consensus       352 ~~~~  355 (854)
                      +.+|
T Consensus       218 ~~~~  221 (228)
T d1k1aa_         218 RSRR  221 (228)
T ss_dssp             SSHH
T ss_pred             HhCC
Confidence            5544

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.2e-28  Score=243.97  Aligned_cols=195  Identities=21%  Similarity=0.214  Sum_probs=147.4

Q ss_pred             cCCcHHHHHHHcCCH----HHHHHHHHcCCCCCC---CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHH
Q psy817          120 EKTTALLWCVFVKRE----DLLDALHQLGADLSN---DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAV  191 (854)
Q Consensus       120 ~~~t~L~~Aa~~g~~----~iv~~Ll~~g~~~~~---~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~  191 (854)
                      +|+||||+|+.+|+.    ++++.+...|+++|.   +|+||||+|+..|+.+++++|+++|+|++..+ +|.|||+.|+
T Consensus         1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~d~~g~t~l~~~~   80 (221)
T d1iknd_           1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLAC   80 (221)
T ss_dssp             CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHH
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHHHHhCCCCcccCCCCCCcccccccccccccccccccccccccccccccccccccccc
Confidence            477888888888875    445556667777754   78888888888888888888888888877655 4777888877


Q ss_pred             hCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcc
Q psy817          192 LGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVD  271 (854)
Q Consensus       192 ~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~  271 (854)
                      ..|+.++++.|++.+.....                     ....+.....|.||||.|+..|+.+++++|+..+ ..++
T Consensus        81 ~~~~~~~~~~l~~~~~~~~~---------------------~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~-~~~~  138 (221)
T d1iknd_          81 EQGCLASVGVLTQSCTTPHL---------------------HSILKATNYNGHTCLHLASIHGYLGIVELLVSLG-ADVN  138 (221)
T ss_dssp             HHTCHHHHHHHHHSTTTTSS---------------------SCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHT-CCTT
T ss_pred             ccccccccchhhhhcccccc---------------------cccccccccccchhhhHHhhcCChhheeeecccC-cccc
Confidence            77777777777776554310                     1112334556888999999999999999888876 6777


Q ss_pred             ccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCC
Q psy817          272 IKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQ  336 (854)
Q Consensus       272 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~  336 (854)
                      ..++..|.||||+|+..|+.+++++|+++|+|++.+|..|.||||+|+..++.+++++|++.+.+
T Consensus       139 ~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~gad~~~~~~~G~tpl~~A~~~~~~~~~~~l~~~~~~  203 (221)
T d1iknd_         139 AQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE  203 (221)
T ss_dssp             CCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCG
T ss_pred             cccccCCCCccccccccccHHHHHHHHhcCCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCc
Confidence            77767788999999999999999999999999999999999999999999999999999887553

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.95  E-value=2.2e-27  Score=235.57  Aligned_cols=195  Identities=27%  Similarity=0.328  Sum_probs=169.2

Q ss_pred             HHHHHHHHHcCCCCCC----CCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHhCCCHHHHHHHHhCCCC
Q psy817          134 EDLLDALHQLGADLSN----DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGNYVDCAKFLIKNKAH  208 (854)
Q Consensus       134 ~~iv~~Ll~~g~~~~~----~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~~~~~iv~~Ll~~~~~  208 (854)
                      -|+|++|+++|+++|.    +|.||||+||..|+.+++++|+++|++++..+ .+.++++.++..++.+...........
T Consensus         2 ~~~v~~Ll~~g~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (209)
T d1ot8a_           2 AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRAT   81 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTCTTC
T ss_pred             HHHHHHHHHCCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhcccccccccccccccccccccccccccccccccccc
Confidence            4899999999999864    79999999999999999999999999998766 489999999999998887777665443


Q ss_pred             C-------CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcH
Q psy817          209 I-------HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTA  281 (854)
Q Consensus       209 ~-------~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~  281 (854)
                      .       +.++.+.+.........+.|.+.|++++.++..|.|||+.|+..|..++++.+++.+ .+++..+. .|.||
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~-~~~~~~d~-~g~Tp  159 (209)
T d1ot8a_          82 NLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHH-ANRDAQDD-KDETP  159 (209)
T ss_dssp             CTTCCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT-CCTTCCCT-TCCCH
T ss_pred             ccccccccccccccccccccchhhhhhhhhhcccccccCCCCCCcchhhcccCcceeeeeecccc-cccccccc-ccccc
Confidence            3       677888888888888899999999999888889999999999999999999888886 77777654 56799


Q ss_pred             HHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHH
Q psy817          282 LHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEML  330 (854)
Q Consensus       282 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L  330 (854)
                      ||+|+..|+.+++++|+++|++++.+|..|.||||+|+++|+.++|++|
T Consensus       160 L~~A~~~g~~~~v~~Ll~~gad~n~~d~~g~Tpl~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         160 LFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL  208 (209)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             cchhccccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHhhc
Confidence            9999999999999999999999888888999999999999999998876

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.95  E-value=9.8e-27  Score=230.85  Aligned_cols=205  Identities=25%  Similarity=0.262  Sum_probs=170.3

Q ss_pred             HHHHHHHHhCCCCcccc--CCCccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q psy817          164 IKGCSWLMLHGHDINFT--KDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQINPNVLNN  241 (854)
Q Consensus       164 ~~iv~~Ll~~g~~~~~~--~~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~  241 (854)
                      .|+|++|+++|+|+|..  .+|.||||+||..|+                           .+++++|++.|+++|..+.
T Consensus         2 ~~~v~~Ll~~g~din~~~d~~G~t~L~~A~~~g~---------------------------~e~v~~Ll~~g~~~n~~~~   54 (209)
T d1ot8a_           2 AQVISDLLAQGAELNATMDKTGETSLHLAARFAR---------------------------ADAAKRLLDAGADANSQDN   54 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTTC---------------------------HHHHHHHHHTTCCTTCCCT
T ss_pred             HHHHHHHHHCCCCcCcCcCCCCCCHHHHHHHcCC---------------------------HHHHHHHHhhccccccccc
Confidence            36778888887777643  246666666665554                           4455555555667788899


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhc
Q psy817          242 KGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKC  321 (854)
Q Consensus       242 ~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~  321 (854)
                      .+.++++.++..++........... ..........+.++.+.+...+.....+.|.+++++++.++..|.|||+.|+.+
T Consensus        55 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~  133 (209)
T d1ot8a_          55 TGRTPLHAAVAADAMGVFQILLRNR-ATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAV  133 (209)
T ss_dssp             TSCCHHHHHHHTTCHHHHHHHHTCT-TCCTTCCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHHT
T ss_pred             ccccccccccccccccccccccccc-ccccccccccccccccccccccchhhhhhhhhhcccccccCCCCCCcchhhccc
Confidence            9999999999999988887777655 333333344566889999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHH
Q psy817          322 QSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCL  398 (854)
Q Consensus       322 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~L  398 (854)
                      +..++++.+++++.+++..|..|.||||.|+..|  +.+++++|+++|+|++.+|..|.||||+|+++|+.++|++|
T Consensus       134 ~~~~~~~~l~~~~~~~~~~d~~g~TpL~~A~~~g--~~~~v~~Ll~~gad~n~~d~~g~Tpl~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         134 NNTEAVNILLMHHANRDAQDDKDETPLFLAAREG--SYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL  208 (209)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT--CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             Ccceeeeeeccccccccccccccccccchhcccc--HHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHhhc
Confidence            9999999999999999999999999999999999  88889999999999999999999999999999999999976

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7.7e-27  Score=233.77  Aligned_cols=211  Identities=22%  Similarity=0.247  Sum_probs=153.7

Q ss_pred             CCChHHHHHHHcCCCChhHHH-H-Hh-----hhcccccCCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCccHHHHHH
Q psy817           90 SGDVNVLYAIENSLYEPDEMA-T-LF-----SKASQAEKTTALLWCVFVKREDLLDALHQLGADLSN---DKYGALHLAA  159 (854)
Q Consensus        90 ~g~~~l~~~~~~~~~~~~~~~-~-~~-----~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~---~g~t~L~~A~  159 (854)
                      .|+|+|+.|+..|+.+..... . +.     .+..+..|.||||+|+..|+.+++++|+++|++++.   .|.++++.|.
T Consensus         2 dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~a~   81 (228)
T d1k1aa_           2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLAC   81 (228)
T ss_dssp             TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHHHHHCCCCCCccCCCCCccceehhccccccccccccccccccccccccccccccccc
Confidence            589999999999987532211 1 11     135677899999999999999999999999998866   7889999999


Q ss_pred             HcCCHHHHHHHHhCCCCcccc-----CCCccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHHHHcCCHHHHHHHHHCCC
Q psy817          160 FNGSIKGCSWLMLHGHDINFT-----KDSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSAVSTNAVDCVQLLLSLQI  234 (854)
Q Consensus       160 ~~g~~~iv~~Ll~~g~~~~~~-----~~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~  234 (854)
                      ..++.++++.+..........     ....+||+.+.........+.|.....+.                         
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~-------------------------  136 (228)
T d1k1aa_          82 EHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADI-------------------------  136 (228)
T ss_dssp             HTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-------------------------
T ss_pred             ccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhcccccc-------------------------
Confidence            999999999988764432211     12456666666555555555544443321                         


Q ss_pred             CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCH
Q psy817          235 NPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIP  314 (854)
Q Consensus       235 ~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~  314 (854)
                       ....+..|.++|+.|+..+..++++.+++++ .+.+.++ ..|.||||+|+.+|+.+++++|+++|+|++.+|.+|.||
T Consensus       137 -~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~-~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~d~~G~Tp  213 (228)
T d1k1aa_         137 -DAVDIKSGRSPLIHAVENNSLSMVQLLLQHG-ANVNAQM-YSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTP  213 (228)
T ss_dssp             -TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCBC-TTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCT
T ss_pred             -ccccccchhhHHHHHHHhhhhhhhhhhhhhc-ccccccc-ccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCH
Confidence             2234456777777777777777777777765 5555554 455688888888888888888888888888888888888


Q ss_pred             HHHHHhcCCHHHHH
Q psy817          315 LHLAAKCQSVECME  328 (854)
Q Consensus       315 L~~A~~~~~~~~v~  328 (854)
                      ||+|+++|+.|+||
T Consensus       214 L~~A~~~~~~divk  227 (228)
T d1k1aa_         214 LMVARSRRVIDILR  227 (228)
T ss_dssp             TTTCSSHHHHHHHT
T ss_pred             HHHHHhCCCccccC
Confidence            88888888877764

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.5e-27  Score=234.85  Aligned_cols=191  Identities=26%  Similarity=0.359  Sum_probs=138.7

Q ss_pred             CchHHHHHHHcCCH----HHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHH
Q psy817          210 HETIVHSAVSTNAV----DCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLA  285 (854)
Q Consensus       210 ~~t~L~~A~~~~~~----~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A  285 (854)
                      |+||||+|+..|+.    ++++.+...|+++|..|.+|+||||+|+..|+.+++++|++++ ++++.++ ..|.|||+.|
T Consensus         2 G~t~Lh~A~~~g~~~~~~~li~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g-~d~~~~d-~~g~t~l~~~   79 (221)
T d1iknd_           2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAG-CDPELRD-FRGNTPLHLA   79 (221)
T ss_dssp             CCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCC-CCSCCCC-TTCCCHHHHH
T ss_pred             CChHHHHHHHcCCHHHHHHHHHHHHhCCCCcccCCCCCCcccccccccccccccccccccc-ccccccc-cccccccccc
Confidence            44555555555543    3344455567778888888888888888888888888888775 7777654 4456888888


Q ss_pred             HHcCCHHHHHHHHhcCCCc------CCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCcc-CCCCcHHHHHHhcCCCC
Q psy817          286 AENGYVECLRILLENHANC------NERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASD-CDNRTPLHASLSKNILS  358 (854)
Q Consensus       286 ~~~g~~~~v~~Ll~~~~~~------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~a~~~~~~~  358 (854)
                      +..|+.++++.|++.+...      ......|.||||.|+..++.+++++|++.|+.++..+ .+|.||||.|+..|  +
T Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g--~  157 (221)
T d1iknd_          80 CEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ--N  157 (221)
T ss_dssp             HHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT--C
T ss_pred             cccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCccccccccc--c
Confidence            8888888888888765542      2334457788888888888888888888888776654 46888888888888  6


Q ss_pred             hHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy817          359 VHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD  404 (854)
Q Consensus       359 ~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~  404 (854)
                      .+++++|+++|+|++.+|..|.||||+|+..++.+++++|++.+.+
T Consensus       158 ~~~v~~Ll~~gad~~~~~~~G~tpl~~A~~~~~~~~~~~l~~~~~~  203 (221)
T d1iknd_         158 PDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE  203 (221)
T ss_dssp             HHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCG
T ss_pred             HHHHHHHHhcCCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCc
Confidence            7778888888888888888888888888888888888888887654

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.93  E-value=3.8e-28  Score=260.11  Aligned_cols=217  Identities=17%  Similarity=0.107  Sum_probs=146.3

Q ss_pred             cccccCCcHHHHHHHcCCHHHHHH---HHHcCCCCCC---CCccHHHHHHHcCCHHHHHHHHhCCCCccccC---CCccH
Q psy817          116 ASQAEKTTALLWCVFVKREDLLDA---LHQLGADLSN---DKYGALHLAAFNGSIKGCSWLMLHGHDINFTK---DSYTP  186 (854)
Q Consensus       116 ~~~~~~~t~L~~Aa~~g~~~iv~~---Ll~~g~~~~~---~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~---~g~t~  186 (854)
                      .++..|.|||++||.+|+.+++++   |++.|+++|.   +|+||||+||++||.++|++|+++|++++..+   +|.||
T Consensus        85 ~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~~~g~t~  164 (346)
T d2ajaa1          85 KKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHA  164 (346)
T ss_dssp             HHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHH
T ss_pred             hccCCCCcHHHHHHHhCCHHHHHHHHHHHhCCCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccccCCCCh
Confidence            346678999999999999887765   7899999876   78999999999999999999999999998643   48999


Q ss_pred             HHHHHhCCCHHHHHHHHhCCCCC---------CchHHHHHHHcCCHHHHHHHHHCCCCCCCCC-------CCCCcHHHHH
Q psy817          187 LHFAVLGNYVDCAKFLIKNKAHI---------HETIVHSAVSTNAVDCVQLLLSLQINPNVLN-------NKGVSPLHIA  250 (854)
Q Consensus       187 L~~A~~~~~~~iv~~Ll~~~~~~---------~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d-------~~g~t~L~~A  250 (854)
                      ||+|+.+||.+++++|++.|++.         +.||++.|+.+|+.++|++|+++|++++..+       ..+.++++.+
T Consensus       165 L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
T d2ajaa1         165 FRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIAR  244 (346)
T ss_dssp             HHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTTTTTTHHHHHHH
T ss_pred             hHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhCCCCcchHHHHHHHcCcHhhhHHHHH
Confidence            99999999999999999999765         4578888999999999999999987754321       2223344444


Q ss_pred             HHcCCHHHHHHHHHcCC-CCcccccc------CCcCcHHHHHHHcCCHHHHHHHHhcCCC-----cCCCCCCCCCHHHHH
Q psy817          251 ADRGLISCLKAILDSGM-ADVDIKTK------ERRVTALHLAAENGYVECLRILLENHAN-----CNERNHKEQIPLHLA  318 (854)
Q Consensus       251 ~~~g~~~iv~~Ll~~~~-~~~~~~~~------~~~~t~L~~A~~~g~~~~v~~Ll~~~~~-----~~~~~~~g~t~L~~A  318 (854)
                      ...+..+....+..... ...+....      ..+.++++.|+..|+.+++++|++.+..     .+..+.+|.||||+|
T Consensus       245 ~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~ld~v~~Ll~~~~~~~~~~~~~~~~~g~T~LhlA  324 (346)
T d2ajaa1         245 HVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLA  324 (346)
T ss_dssp             HHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHH
T ss_pred             hhccchHHHHHHHHhcccccHhHHhcccccccchhhhHHHHHhcCChHHHHHHHHhCcChhhhcccccCCCCCCcHHHHH
Confidence            44444333333322110 00111000      0122455555556666666666654432     223334455666666


Q ss_pred             HhcCCHHHHHHHHh
Q psy817          319 AKCQSVECMEMLLR  332 (854)
Q Consensus       319 ~~~~~~~~v~~Ll~  332 (854)
                      |+.|+.+++++|++
T Consensus       325 ~~~Gn~e~v~lLL~  338 (346)
T d2ajaa1         325 LRLGNQGACALLLS  338 (346)
T ss_dssp             HHHTCTTHHHHHTT
T ss_pred             HHcCcHHHHHHHhC
Confidence            66666666666654

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.92  E-value=2.1e-27  Score=254.24  Aligned_cols=222  Identities=11%  Similarity=0.010  Sum_probs=137.2

Q ss_pred             CCccHHHHHHHcCCHHHHHH---HHhCCCCccccC-CCccHHHHHHhCCCHHHHHHHHhCCCCC--------CchHHHHH
Q psy817          150 DKYGALHLAAFNGSIKGCSW---LMLHGHDINFTK-DSYTPLHFAVLGNYVDCAKFLIKNKAHI--------HETIVHSA  217 (854)
Q Consensus       150 ~g~t~L~~A~~~g~~~iv~~---Ll~~g~~~~~~~-~g~t~L~~A~~~~~~~iv~~Ll~~~~~~--------~~t~L~~A  217 (854)
                      .|.||||+||.+||.+++++   |+++|+++|..+ +|.||||+|+.+||.++|++|+++|+++        |.||||+|
T Consensus        89 ~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A  168 (346)
T d2ajaa1          89 KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLA  168 (346)
T ss_dssp             CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHH
T ss_pred             CCCcHHHHHHHhCCHHHHHHHHHHHhCCCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccccCCCChhHHH
Confidence            68899999999999877765   788999998766 5899999999999999999999988875        56778888


Q ss_pred             HHcCCHHHHHHHHHCCCCCC---CCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHH
Q psy817          218 VSTNAVDCVQLLLSLQINPN---VLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECL  294 (854)
Q Consensus       218 ~~~~~~~~v~~Ll~~g~~~~---~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v  294 (854)
                      +.+|+.++|++|++.|++.+   ..+.+|.||++.|+.+|+.+++++|+++| ++++        ++.+.+...|+.++.
T Consensus       169 a~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~g-a~~~--------~~~~~~~~~~~~~~~  239 (346)
T d2ajaa1         169 AENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP-VMLA--------YAEIHEFEYGEKYVN  239 (346)
T ss_dssp             HHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH-HHHH--------HHHHCTTTTTTTTHH
T ss_pred             HHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhCC-CCcc--------hHHHHHHHcCcHhhh
Confidence            87788888888777776542   23344556666677777777777777654 3222        333333333443333


Q ss_pred             HHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCC--CCCcc-------CCCCcHHHHHHhcCCCChHHHHHH
Q psy817          295 RILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQ--VNASD-------CDNRTPLHASLSKNILSVHPLEIL  365 (854)
Q Consensus       295 ~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~-------~~g~t~L~~a~~~~~~~~~~v~~L  365 (854)
                      ++++.                   ...+..+....+.....+  .+..+       ..+.++++.++..+  ..+++++|
T Consensus       240 ~~~~~-------------------~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~--~ld~v~~L  298 (346)
T d2ajaa1         240 PFIAR-------------------HVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEV--LLDDIRFL  298 (346)
T ss_dssp             HHHHH-------------------HHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGG--GHHHHHHH
T ss_pred             HHHHH-------------------hhccchHHHHHHHHhcccccHhHHhcccccccchhhhHHHHHhcCC--hHHHHHHH
Confidence            33322                   222222211111111110  00000       11234555555555  55666666


Q ss_pred             HhCCCC-----CccCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q psy817          366 LKWGAN-----VNARDIFGYSPIHIAALSELSQCVDCLIMH  401 (854)
Q Consensus       366 l~~g~d-----~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~  401 (854)
                      ++.+..     .+..+.+|+||||+|++.|+.++|++|++.
T Consensus       299 l~~~~~~~~~~~~~~~~~g~T~LhlA~~~Gn~e~v~lLL~~  339 (346)
T d2ajaa1         299 LSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSI  339 (346)
T ss_dssp             HTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTS
T ss_pred             HhCcChhhhcccccCCCCCCcHHHHHHHcCcHHHHHHHhCC
Confidence            665542     334455788888888888888888888864

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=8e-24  Score=198.79  Aligned_cols=151  Identities=24%  Similarity=0.319  Sum_probs=111.2

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHH
Q psy817          246 PLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVE  325 (854)
Q Consensus       246 ~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~  325 (854)
                      +|+.||..|+.++|+.|+++++++++..+ ..|.||||+|+ .|+.+++++|++++.+++..+..|.+|++.|+..++.+
T Consensus         5 ~L~~Aa~~g~~~~vk~lL~~~~~~~n~~d-~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~~~~~~   82 (156)
T d1bd8a_           5 RLSGAAARGDVQEVRRLLHRELVHPDALN-RFGKTALQVMM-FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLD   82 (156)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCCCTTCCC-TTSCCHHHHSC-TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred             HHHHHHHcCCHHHHHHHHHhCCCCCCccC-CCCCccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence            46777777777777777766656666654 34557777665 36667777777777777777777777777777777777


Q ss_pred             HHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q psy817          326 CMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMH  401 (854)
Q Consensus       326 ~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~  401 (854)
                      +++.++++|+++|..|..|.||||.|+..|  +.+++++|+ .|++++.+|.+|+||||+|+..|+.+++++|++|
T Consensus        83 ~~~~~l~~~~~~n~~~~~~~t~L~~A~~~~--~~~i~~~L~-~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_          83 TLKVLVEHGADVNVPDGTGALPIHLAVQEG--HTAVVSFLA-AESDLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHHHHHTTCCSCCCCTTSCCHHHHHHHHT--CHHHHHHHH-TTSCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             ccccccccccccccccCCCCeeeccccccc--ccccccccc-ccccccccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence            777777777777777777777777777777  666777665 5677788888888888888888888888888775

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=6.4e-24  Score=199.56  Aligned_cols=153  Identities=27%  Similarity=0.329  Sum_probs=84.8

Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCH
Q psy817          245 SPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSV  324 (854)
Q Consensus       245 t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~  324 (854)
                      +|||.||..|+.++|+.|+++| ++++.++ ..|.||||+|+ .|+.+++++|+++|++++..+..|.++++.++..++.
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g-~d~n~~d-~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~~~~   79 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNN-VNVNAQN-GFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFL   79 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSC-CCTTCCC-TTSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCC-CCcCccC-Ccccccccccc-cccccccccccccccccccccccCccccccccccccc
Confidence            3444444444444444444433 4444332 22334444443 3445555555555555555555555555555555555


Q ss_pred             HHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCC-CCccCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q psy817          325 ECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGA-NVNARDIFGYSPIHIAALSELSQCVDCLIMHG  402 (854)
Q Consensus       325 ~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~-d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g  402 (854)
                      +.++.|++++.+++..+..|.+|+|.|+..+  +.+++++|+++|. +++.+|..|.||||+|+..++.+++++|+++|
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~--~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll~~G  156 (156)
T d1ihba_          80 DTLQTLLEFQADVNIEDNEGNLPLHLAAKEG--HLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG  156 (156)
T ss_dssp             HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT--CHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred             ccccccccccccccccccccccccccccccc--cccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence            5555555555555555555555665555555  4555555555554 55666667777777777777777777777765

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.2e-23  Score=197.56  Aligned_cols=153  Identities=24%  Similarity=0.350  Sum_probs=135.0

Q ss_pred             hHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCH
Q psy817          212 TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYV  291 (854)
Q Consensus       212 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~  291 (854)
                      ++||.|+..|+.++|+.|+++|+|+|.+|.+|.||||+|+ .|+.+++++|++++ ++++..+. .+.++++.++..++.
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~-a~~~~~~~-~~~~~l~~~~~~~~~   79 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRG-ANPDLKDR-TGFAVIHDAARAGFL   79 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTT-CCTTCCCT-TSCCHHHHHHHHTCH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCcCccCCcccccccccc-cccccccccccccc-cccccccc-cCccccccccccccc
Confidence            6889999999999999999999999999999999998775 78999999999886 78887654 456999999999999


Q ss_pred             HHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCC-CCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCC
Q psy817          292 ECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGS-QVNASDCDNRTPLHASLSKNILSVHPLEILLKWG  369 (854)
Q Consensus       292 ~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g  369 (854)
                      +.++.|++++.+++..+..|.+|+++|+..++.+++++|+++|. +.+.+|..|.||||+|+..+  +.+++++|+++|
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~--~~~iv~~Ll~~G  156 (156)
T d1ihba_          80 DTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYG--RNEVVSLMQANG  156 (156)
T ss_dssp             HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTT--CHHHHHHHHHTC
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHcC--CHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999998876 78888999999999999988  788899999886

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=9.5e-23  Score=191.31  Aligned_cols=151  Identities=24%  Similarity=0.395  Sum_probs=135.7

Q ss_pred             hHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCC
Q psy817          212 TIVHSAVSTNAVDCVQLLLSL-QINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGY  290 (854)
Q Consensus       212 t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~  290 (854)
                      ..|+.|+..|+.++|+.|++. |+++|..|..|.||||+|+ .|+.+++++|++++ .+++.... .|.+|++.|+..++
T Consensus         4 ~~L~~Aa~~g~~~~vk~lL~~~~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~-~~~~~~~~-~~~~~l~~~~~~~~   80 (156)
T d1bd8a_           4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQG-ASPNVQDT-SGTSPVHDAARTGF   80 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHHTT-CCTTCCCT-TSCCHHHHHHHTTC
T ss_pred             HHHHHHHHcCCHHHHHHHHHhCCCCCCccCCCCCccccccc-cccccccccccccc-cccccccc-cccccccccccccc
Confidence            458999999999999999876 7899999999999999887 48899999999886 78887654 56799999999999


Q ss_pred             HHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhC
Q psy817          291 VECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKW  368 (854)
Q Consensus       291 ~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~  368 (854)
                      .++++.++++|++++.+|..|.||||+|+..|+.+++++|+ .|++++.+|.+|+||||+|+..|  +.+++++|++|
T Consensus        81 ~~~~~~~l~~~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~~d~~G~TpL~~A~~~g--~~~iv~~Ll~h  155 (156)
T d1bd8a_          81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLTPLELALQRG--AQDLVDILQGH  155 (156)
T ss_dssp             HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTCCCTTSCCHHHHHHHSC--CHHHHHHHHTT
T ss_pred             ccccccccccccccccccCCCCeeecccccccccccccccc-ccccccccCCCCCCHHHHHHHcC--CHHHHHHHHhh
Confidence            99999999999999999999999999999999999999887 68899999999999999999999  78889999875

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=1.5e-22  Score=189.42  Aligned_cols=118  Identities=30%  Similarity=0.444  Sum_probs=53.1

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCC
Q psy817          279 VTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILS  358 (854)
Q Consensus       279 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~  358 (854)
                      .||||+|+..++.++++.++.........+..+.++++.++...+.++++++.++|++.+..|.+|.||||+|+..|  +
T Consensus        35 ~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g--~  112 (153)
T d1awcb_          35 TSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHN--H  112 (153)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTT--C
T ss_pred             CccccccccccccccccccccccccccccccccccccccccccccceeeecccccCCccccccccCchHHHhhhhcc--h
Confidence            34444444444444444444333333333334444444444444444444444444444444444444444444444  3


Q ss_pred             hHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHH
Q psy817          359 VHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCL  398 (854)
Q Consensus       359 ~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~L  398 (854)
                      .+++++|+++|+|++.+|.+|.||||+|+.+|+.+++++|
T Consensus       113 ~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_         113 QEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             hheeeeccccccCCcccCCCCCCHHHHHHHcCCHHHHHhC
Confidence            4444444444444444444555555555555555555443

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=1.5e-22  Score=189.30  Aligned_cols=149  Identities=32%  Similarity=0.448  Sum_probs=142.3

Q ss_pred             cHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCCh
Q psy817          280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSV  359 (854)
Q Consensus       280 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~  359 (854)
                      |||+.|++.|+.++|+.|+++|++++ .|..|.||||+|+..++.++++.++......+..+..+.++++.++...  ..
T Consensus         4 t~L~~Aa~~g~~~~v~~LL~~ga~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~   80 (153)
T d1awcb_           4 KKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEG--HA   80 (153)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHT--CH
T ss_pred             HHHHHHHHCCCHHHHHHHHHcCCCcc-cccCCCccccccccccccccccccccccccccccccccccccccccccc--cc
Confidence            99999999999999999999999887 6999999999999999999999999998888888889999999999998  78


Q ss_pred             HHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHhcCCcchHHhh
Q psy817          360 HPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIMRNTPSSISSVR  431 (854)
Q Consensus       360 ~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~  431 (854)
                      +.++.+..+|++.+.+|.+|.||||+|+..|+.+++++|+++|+|++.+|.+|.|||++|+.+++.++++++
T Consensus        81 ~~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_          81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             eeeecccccCCccccccccCchHHHhhhhcchhheeeeccccccCCcccCCCCCCHHHHHHHcCCHHHHHhC
Confidence            889999999999999999999999999999999999999999999999999999999999999999887765

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.1e-22  Score=182.44  Aligned_cols=121  Identities=22%  Similarity=0.319  Sum_probs=112.1

Q ss_pred             CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcC
Q psy817          210 HETIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENG  289 (854)
Q Consensus       210 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g  289 (854)
                      +.++||.|+..|+.++|++|+++|+|+|.+|..|.||||.|+ .|+.+++++|++++ ++++.++...+.||||+|++.|
T Consensus         3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~g-a~~~~~~~~~~~~~L~~A~~~g   80 (125)
T d1bi7b_           3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHG-AEPNCADPATLTRPVHDAAREG   80 (125)
T ss_dssp             STTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTT-CCCCCCCTTTCCCHHHHHHHHT
T ss_pred             ChhHHHHHHHCCCHHHHHHHHHcCCccccccccccccccccc-cccccccccccccc-cccccccccccccccccccccc
Confidence            568899999999999999999999999999999999999765 79999999999986 8899888777778999999999


Q ss_pred             CHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHh
Q psy817          290 YVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLR  332 (854)
Q Consensus       290 ~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~  332 (854)
                      +.+++++|+++|++++.+|..|.||||+|+.+|+.+++++|++
T Consensus        81 ~~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          81 FLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             CHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             cccccccccccccccccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            9999999999999999999999999999999999999999875

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.4e-22  Score=180.18  Aligned_cols=119  Identities=29%  Similarity=0.367  Sum_probs=111.4

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCC-cHHHHHHhcCCC
Q psy817          279 VTALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNR-TPLHASLSKNIL  357 (854)
Q Consensus       279 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~a~~~~~~  357 (854)
                      .++||.|+.+|+.++|++|+++|++++.++..|.||+|.| ..|+.+++++|+++|++++..+..+. ||||.|+..|  
T Consensus         4 ~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~g~t~l~~a-~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~~g--   80 (125)
T d1bi7b_           4 ADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVM-MMGSARVAELLLLHGAEPNCADPATLTRPVHDAAREG--   80 (125)
T ss_dssp             TTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSS-CTTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHT--
T ss_pred             hhHHHHHHHCCCHHHHHHHHHcCCcccccccccccccccc-ccccccccccccccccccccccccccccccccccccc--
Confidence            4899999999999999999999999999999999999966 47999999999999999999988876 6999999999  


Q ss_pred             ChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q psy817          358 SVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIM  400 (854)
Q Consensus       358 ~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~  400 (854)
                      +.+++++|+++|++++.+|..|+||||+|+.+|+.+++++|++
T Consensus        81 ~~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          81 FLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             CHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             cccccccccccccccccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            8889999999999999999999999999999999999999875

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.85  E-value=1.2e-21  Score=205.26  Aligned_cols=189  Identities=18%  Similarity=0.162  Sum_probs=130.2

Q ss_pred             HHHHHHHCCCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCH-------HHHHH
Q psy817          225 CVQLLLSLQINPNVL-NNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYV-------ECLRI  296 (854)
Q Consensus       225 ~v~~Ll~~g~~~~~~-d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~-------~~v~~  296 (854)
                      +...+...++++|.. |.+|.||||+||..|+.++|++|+++| ++++.++. .|.||||.|+..++.       +++++
T Consensus        88 ~~~~~~~~~~dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~g-ad~~~~d~-~G~TpL~~A~~~~~~~~~~~~~~ll~~  165 (301)
T d1sw6a_          88 VNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHG-SNRLYGDN-MGESCLVKAVKSVNNYDSGTFEALLDY  165 (301)
T ss_dssp             HHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTBCCT-TCCCHHHHHHHSSHHHHTTCHHHHHHH
T ss_pred             HHhcCCccCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCcCCc-ccccHHHHhhhcccchhhhhHHHHHHH
Confidence            333333457888865 899999999999999999999999987 99998764 577999999987652       44454


Q ss_pred             HHhcCCCcCCCCCCCCCHHHHHHhcCC----HH--------HHHHHHhCCCCC-CCccCCCCcHHHHHHhcCCCCh-H--
Q psy817          297 LLENHANCNERNHKEQIPLHLAAKCQS----VE--------CMEMLLRKGSQV-NASDCDNRTPLHASLSKNILSV-H--  360 (854)
Q Consensus       297 Ll~~~~~~~~~~~~g~t~L~~A~~~~~----~~--------~v~~Ll~~g~~~-~~~~~~g~t~L~~a~~~~~~~~-~--  360 (854)
                      +.+   +++..|..|+||||.|+..+.    ..        +++++.+.+... ......+.++++.+........ .  
T Consensus       166 l~~---~~~~~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (301)
T d1sw6a_         166 LYP---CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENL  242 (301)
T ss_dssp             HGG---GGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHC
T ss_pred             Hhh---hhhhcccccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHH
Confidence            433   456778899999999885543    22        334555554432 2333445555555444331111 0  


Q ss_pred             HHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Q psy817          361 PLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGADISSKTPSGSSALSIIM  420 (854)
Q Consensus       361 ~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~  420 (854)
                      ....++.  ..+|.+|.+|+||||+|++.|+.++|++|+++|||++.+|..|.|||++|+
T Consensus       243 ~~~~~~~--~~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         243 DLKWIIA--NMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA  300 (301)
T ss_dssp             SHHHHHH--HTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred             hhHHHHh--cCccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHcC
Confidence            0122222  237889999999999999999999999999999999999999999999885

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.85  E-value=2.4e-22  Score=178.11  Aligned_cols=105  Identities=27%  Similarity=0.421  Sum_probs=62.8

Q ss_pred             cHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCCh
Q psy817          280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSV  359 (854)
Q Consensus       280 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~  359 (854)
                      |||++|+++|+.++|++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.++  +.
T Consensus         4 tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~--~~   81 (118)
T d1myoa_           4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEG--HV   81 (118)
T ss_dssp             HHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTT--CC
T ss_pred             hHHHHHHHCCCHHHHHHHHHhhhccccccccccccccccccccccccccccccccceeeecccccccchhhhhhcC--ch
Confidence            5666666666666666666666666666666666666666666666666666666665555555555555555555  44


Q ss_pred             HHHHHHHhCCCCCccCCCCCCCHHHHH
Q psy817          360 HPLEILLKWGANVNARDIFGYSPIHIA  386 (854)
Q Consensus       360 ~~v~~Ll~~g~d~n~~d~~g~t~L~~A  386 (854)
                      +++++|+++|+|++.+|.+|.||||+|
T Consensus        82 ~~v~~Ll~~Gad~~~~d~~G~t~l~~a  108 (118)
T d1myoa_          82 SCVKLLLSKGADKTVKGPDGLTALEAT  108 (118)
T ss_dssp             HHHHHHHTTCCCSSSSSSSTCCCCCTC
T ss_pred             hhhhhhhcccccceeeCCCCCCHHHHH
Confidence            555555555555555555555555554

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.83  E-value=1.5e-21  Score=204.50  Aligned_cols=185  Identities=12%  Similarity=0.049  Sum_probs=110.1

Q ss_pred             cCCCCC----CCCccHHHHHHHcCCHHHHHHHHhCCCCccccC-CCccHHHHHHhCCCHHHHHHHHhCCCCCCchHHHHH
Q psy817          143 LGADLS----NDKYGALHLAAFNGSIKGCSWLMLHGHDINFTK-DSYTPLHFAVLGNYVDCAKFLIKNKAHIHETIVHSA  217 (854)
Q Consensus       143 ~g~~~~----~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~g~t~L~~A~~~~~~~iv~~Ll~~~~~~~~t~L~~A  217 (854)
                      .+.++|    .+|+||||+||..|+.++|++|+++|+|++..+ .|+||||.|+..++.                     
T Consensus        95 ~~~dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~---------------------  153 (301)
T d1sw6a_          95 TQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNN---------------------  153 (301)
T ss_dssp             SCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHH---------------------
T ss_pred             cCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcCCcccccHHHHhhhcccc---------------------
Confidence            455554    479999999999999999999999999999776 489999999987642                     


Q ss_pred             HHcCC-HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC----HH--------HHHHHHHcCCCCccccccCCcCcHHHH
Q psy817          218 VSTNA-VDCVQLLLSLQINPNVLNNKGVSPLHIAADRGL----IS--------CLKAILDSGMADVDIKTKERRVTALHL  284 (854)
Q Consensus       218 ~~~~~-~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~----~~--------iv~~Ll~~~~~~~~~~~~~~~~t~L~~  284 (854)
                      ...+. .++++++.+   +++..|..|+||||.|+..+.    ..        ++.++...+....... ...+.++++.
T Consensus       154 ~~~~~~~~ll~~l~~---~~~~~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~  229 (301)
T d1sw6a_         154 YDSGTFEALLDYLYP---CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSG-TNEKESKPND  229 (301)
T ss_dssp             HHTTCHHHHHHHHGG---GGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----------
T ss_pred             hhhhhHHHHHHHHhh---hhhhcccccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcc-cccccchhHH
Confidence            01111 123333322   344566777888887775443    22        3344445442222222 2233355555


Q ss_pred             HHHcCCHHHHHHHHh---cCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHH
Q psy817          285 AAENGYVECLRILLE---NHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASL  352 (854)
Q Consensus       285 A~~~g~~~~v~~Ll~---~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~  352 (854)
                      +........+..+..   .+..+|.+|..|+||||+|++.|+.+++++|+++|++++..|..|.|||++|+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         230 KNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA  300 (301)
T ss_dssp             ------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred             HHhcchHHHHHHHhhHHHHhcCccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHcC
Confidence            544444333332211   01225677778888888888888888888888888888888888888887764

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.83  E-value=2.4e-21  Score=171.51  Aligned_cols=107  Identities=30%  Similarity=0.382  Sum_probs=103.1

Q ss_pred             CCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCC
Q psy817          312 QIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSEL  391 (854)
Q Consensus       312 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~  391 (854)
                      .|||++|+++|+.+++++|+++|++++..|..|+||||.|+..+  +.+++++++++|+++|.+|..|.||||+|+.+|+
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~--~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~~   80 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCG--QLEILEFLLLKGADINAPDKHHITPLLSAVYEGH   80 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHS--TTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTTC
T ss_pred             ChHHHHHHHCCCHHHHHHHHHhhhcccccccccccccccccccc--ccccccccccccceeeecccccccchhhhhhcCc
Confidence            37999999999999999999999999999999999999999999  6778999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCccccCCCCCCHHHHHH
Q psy817          392 SQCVDCLIMHGADISSKTPSGSSALSIIM  420 (854)
Q Consensus       392 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~  420 (854)
                      .+++++|+++|+|++.+|..|.||+++|.
T Consensus        81 ~~~v~~Ll~~Gad~~~~d~~G~t~l~~a~  109 (118)
T d1myoa_          81 VSCVKLLLSKGADKTVKGPDGLTALEATD  109 (118)
T ss_dssp             CHHHHHHHTTCCCSSSSSSSTCCCCCTCS
T ss_pred             hhhhhhhhcccccceeeCCCCCCHHHHHh
Confidence            99999999999999999999999999873

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1e-20  Score=170.64  Aligned_cols=121  Identities=24%  Similarity=0.235  Sum_probs=96.0

Q ss_pred             cHHHHHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCCCCccCCCCcHHHHHHhcCCCCh
Q psy817          280 TALHLAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGSQVNASDCDNRTPLHASLSKNILSV  359 (854)
Q Consensus       280 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~  359 (854)
                      ++|+.|+..|+.++|+.|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|.+|+||||+|+..|  +.
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g--~~   80 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCN--NV   80 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTT--CH
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCccccccccccccccccccccccccccccccccccccccccCcccccccchhh--HH
Confidence            5678888888888888888888888888888888888888888888888888888888888888888888888887  67


Q ss_pred             HHHHHHHhCCCCCccCCC-CCCCHHHHH--HHcCCHHHHHHHHHcC
Q psy817          360 HPLEILLKWGANVNARDI-FGYSPIHIA--ALSELSQCVDCLIMHG  402 (854)
Q Consensus       360 ~~v~~Ll~~g~d~n~~d~-~g~t~L~~A--~~~~~~~~v~~Ll~~g  402 (854)
                      +++++|+++|++++..+. .|.||++++  +..|+.+++++|++.+
T Consensus        81 ~~v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~~  126 (130)
T d1ycsb1          81 QVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQ  126 (130)
T ss_dssp             HHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHH
T ss_pred             HHHHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHhHH
Confidence            778888888888887664 477776654  4567788888887643

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.7e-20  Score=167.82  Aligned_cols=120  Identities=21%  Similarity=0.259  Sum_probs=94.5

Q ss_pred             hHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccccCCcCcHHHHHHHcCCH
Q psy817          212 TIVHSAVSTNAVDCVQLLLSLQINPNVLNNKGVSPLHIAADRGLISCLKAILDSGMADVDIKTKERRVTALHLAAENGYV  291 (854)
Q Consensus       212 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~g~~  291 (854)
                      ++|+.|+..|+.++|++|+++|+|+|.+|.+|.||||+|+..|+.+++++|++.+ ++++.++ ..|.||||+|+.+|+.
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g-~~~~~~d-~~g~tpLh~A~~~g~~   80 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFG-VNVNAAD-SDGWTPLHCAASCNNV   80 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHT-CCTTCCC-TTCCCHHHHHHHTTCH
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCccccccccccccccccccccccccccccccc-ccccccc-ccCcccccccchhhHH
Confidence            5678888888888888888888888888888888888888888888888888876 7777665 4566888888888888


Q ss_pred             HHHHHHHhcCCCcCCCCC-CCCCHHHHH--HhcCCHHHHHHHHhC
Q psy817          292 ECLRILLENHANCNERNH-KEQIPLHLA--AKCQSVECMEMLLRK  333 (854)
Q Consensus       292 ~~v~~Ll~~~~~~~~~~~-~g~t~L~~A--~~~~~~~~v~~Ll~~  333 (854)
                      +++++|+++|++++..+. .|+||++++  +..|+.+++++|++.
T Consensus        81 ~~v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~  125 (130)
T d1ycsb1          81 QVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV  125 (130)
T ss_dssp             HHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred             HHHHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHhH
Confidence            888888888888876654 477776654  466778888888764

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.79  E-value=4.1e-19  Score=164.24  Aligned_cols=123  Identities=19%  Similarity=0.280  Sum_probs=103.9

Q ss_pred             cHHHHHHHcCCHHHHHHHHhcCCCcCCC------CCCCCCHHHHHHhc---CCHHHHHHHHhCCCCCCCccCCCCcHHHH
Q psy817          280 TALHLAAENGYVECLRILLENHANCNER------NHKEQIPLHLAAKC---QSVECMEMLLRKGSQVNASDCDNRTPLHA  350 (854)
Q Consensus       280 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~------~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~  350 (854)
                      ..|..|++.+++..+..++..|++++..      +..|+||||+|+..   |+.+++++|+++|+++|.+|..|+||||+
T Consensus         8 ~~L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~TpLh~   87 (154)
T d1dcqa1           8 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHY   87 (154)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHH
T ss_pred             HHHHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCChhhhhhhhcccccc
Confidence            3456677888888888888877775543      66788999999864   67889999999999999999999999999


Q ss_pred             HHhcCCCChHHHHHHHhCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy817          351 SLSKNILSVHPLEILLKWGANVNARDIFGYSPIHIAALSELSQCVDCLIMHGAD  404 (854)
Q Consensus       351 a~~~~~~~~~~v~~Ll~~g~d~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~  404 (854)
                      |+..|  +.+++++|+++|++++.+|..|.||||+|++.|+.+++++|++.++.
T Consensus        88 A~~~~--~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~  139 (154)
T d1dcqa1          88 CCLTD--NAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG  139 (154)
T ss_dssp             HHHTT--CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred             ccccc--cccccccccccCccccccCCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence            99988  77889999999999999999999999999999999999999987654

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.76  E-value=2.7e-18  Score=158.66  Aligned_cols=121  Identities=21%  Similarity=0.319  Sum_probs=87.1

Q ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCCC------CCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCccccccCCcCcHHH
Q psy817          213 IVHSAVSTNAVDCVQLLLSLQINPNVL------NNKGVSPLHIAADR---GLISCLKAILDSGMADVDIKTKERRVTALH  283 (854)
Q Consensus       213 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~------d~~g~t~L~~A~~~---g~~~iv~~Ll~~~~~~~~~~~~~~~~t~L~  283 (854)
                      .|..|++++++..+..++..|+|++..      +..|.||||+|+..   |+.+++++|+++| ++++.++. .|.||||
T Consensus         9 ~L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g-adin~~d~-~g~TpLh   86 (154)
T d1dcqa1           9 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS-GNLDKQTG-KGSTALH   86 (154)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC-SCTTCCCT-TCCCHHH
T ss_pred             HHHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcC-CChhhhhh-hhccccc
Confidence            345677777777777777777776543      55677777777764   5677777777775 67776653 4567777


Q ss_pred             HHHHcCCHHHHHHHHhcCCCcCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCC
Q psy817          284 LAAENGYVECLRILLENHANCNERNHKEQIPLHLAAKCQSVECMEMLLRKGS  335 (854)
Q Consensus       284 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~  335 (854)
                      +|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++.++
T Consensus        87 ~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~  138 (154)
T d1dcqa1          87 YCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALS  138 (154)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred             cccccccccccccccccCccccccCCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence            7777777777777777777777777777777777777777777777777544

>d1r3jc_ f.14.1.1 (C:) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]}

class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Potassium channel protein
species: Streptomyces coelicolor [TaxId: 1902]

Probab=84.70  E-value=7.4  Score=30.27  Aligned_cols=85  Identities=8%  Similarity=0.043  Sum_probs=50.4

Q ss_pred             HHHHHHHHHHHHHHHHHhcCC--CCccCChHHHHHHHHHHHhcCcchhhhhccCCCCCccccchhHHHHHHHHHHHHHHH
Q psy817          666 FQAYICLLVGFTLTFCIVFPS--EDRFQNPIIGFINILVMMTGELNVNEVLLGTEAKPPVLLKGTAHIVFTIFMLFVTVV  743 (854)
Q Consensus       666 ~~i~~~~l~aF~~~f~~l~~~--~~~f~~~~~s~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ilf~~f~~~~~iv  743 (854)
                      +++++++++.++..++..-.+  ++.|.++.++++-.+..++ .+.|.|+       .|.  ...++++ .++.+++.++
T Consensus        12 ~~~~~~~~~~~s~~~~~~e~~~~~~~~~s~~~aly~~~vT~t-TvGYGDi-------~P~--t~~gr~~-~~~~~~~Gi~   80 (103)
T d1r3jc_          12 TVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETAT-TVGYGDL-------YPV--TLWGRCV-AVVVMVAGIT   80 (103)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSTTCCCCSHHHHHHHHHHHHT-TCCCSSS-------CCC--SHHHHHH-HHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCCcccCchhhhhhhheeeec-ccccCcc-------ccC--ChhHHHH-HHHHHHHHHH
Confidence            334444555556666655443  3457787777766555443 2444432       111  2457764 5556667788


Q ss_pred             HHHHHHHHHHhhHHHHHh
Q psy817          744 LMNLLVGIAVQDIQGLHK  761 (854)
Q Consensus       744 LlNlLIA~~~~~~~~v~~  761 (854)
                      ++-+++|.+++.+.+-++
T Consensus        81 ~~~~~~~~i~~~~~~~~~   98 (103)
T d1r3jc_          81 SFGLVTAALATWFVGREQ   98 (103)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            889999999988866443