Psyllid ID: psy8408
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 393 | ||||||
| 52630963 | 393 | putative innexin 3 [Toxoptera citricida] | 1.0 | 1.0 | 0.743 | 1e-180 | |
| 193591708 | 392 | PREDICTED: innexin inx3-like [Acyrthosip | 0.997 | 1.0 | 0.743 | 1e-178 | |
| 66526650 | 396 | PREDICTED: innexin inx3 isoform 2 [Apis | 0.987 | 0.979 | 0.694 | 1e-167 | |
| 345496464 | 396 | PREDICTED: innexin inx3-like isoform 1 [ | 0.987 | 0.979 | 0.681 | 1e-166 | |
| 383849583 | 396 | PREDICTED: innexin inx3-like [Megachile | 0.987 | 0.979 | 0.681 | 1e-166 | |
| 242014052 | 399 | Innexin inx2, putative [Pediculus humanu | 1.0 | 0.984 | 0.684 | 1e-165 | |
| 307210798 | 396 | Innexin inx3 [Harpegnathos saltator] | 0.987 | 0.979 | 0.681 | 1e-165 | |
| 350414015 | 396 | PREDICTED: innexin inx3-like [Bombus imp | 0.987 | 0.979 | 0.679 | 1e-163 | |
| 389611569 | 386 | innexin 3 [Papilio xuthus] | 0.979 | 0.997 | 0.686 | 1e-163 | |
| 357619689 | 386 | innexin 3 [Danaus plexippus] | 0.979 | 0.997 | 0.686 | 1e-163 |
| >gi|52630963|gb|AAU84945.1| putative innexin 3 [Toxoptera citricida] | Back alignment and taxonomy information |
|---|
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 292/393 (74%), Positives = 342/393 (87%)
Query: 1 MSVFAMVSAMAGFVKVRYLMDKAIIDNLVFRCHYRITSAMLFVSCVLVTANNLIGDPINC 60
M++F M+SA+AGF+KVRY++DKA IDN VFR HYR+T+A+LF C+LVTANNLIGDPI+C
Sbjct: 1 MAIFPMLSAVAGFIKVRYVVDKANIDNAVFRAHYRLTTAILFGCCILVTANNLIGDPISC 60
Query: 61 IADGAVPGHVINTYCWITSTFTLPHQAHKPVGSHVIHPAVGSYVEGEDEKRYHTYYQWVP 120
I DGA+P HVINT+CWIT TFTLP + K +G+HV HP V YV+G+D+ RYH YYQWVP
Sbjct: 61 ITDGAIPEHVINTFCWITHTFTLPDKIGKGLGTHVAHPGVSDYVDGKDQIRYHAYYQWVP 120
Query: 121 FMLFFQGILFYVPHWIWKNLEENKVRMITDGMRGAIVTSKEDRRERQKRLVQYIIDTLHM 180
FMLFFQGILFYVPHWIWKN EE K+RMITDG+RGA + +DR RQK+LVQY+IDTLHM
Sbjct: 121 FMLFFQGILFYVPHWIWKNWEEGKIRMITDGVRGASIGQNDDRLSRQKQLVQYLIDTLHM 180
Query: 181 HNVYAAGYFFCEFLNFVNVVGNMILIDSFLGGTFFTYGTEVLKFTQLNQENRTDPMVEVF 240
HNVYA+GYF CE NF+NV+GNM LIDSFLGG FF+YGT+VL+ +Q++QENR DPMV VF
Sbjct: 181 HNVYASGYFLCEVFNFLNVIGNMFLIDSFLGGEFFSYGTKVLELSQMDQENRIDPMVAVF 240
Query: 241 PRVTKCTFHKYGSSGSIQDHDALCILALNILNEKIYILLWFWFYALAIMSFGAICYSLSV 300
PRVTKCTFHKYG SGS+Q HDALC+LALNILNEKIYI LWFWF LAI+S A+ YS++V
Sbjct: 241 PRVTKCTFHKYGPSGSMQTHDALCVLALNILNEKIYIFLWFWFIILAIISGMALAYSIAV 300
Query: 301 ITLPSIRETILIRRFRFGTPAGVSALIRRTQVGDFLLLHLLGQNMNNMFFGEILDELSTN 360
+TLPSIRETIL+RRF+FGTP VSALIR+TQVGDFLLLHLLGQNMN F E+LD+LS+
Sbjct: 301 VTLPSIRETILLRRFKFGTPQSVSALIRKTQVGDFLLLHLLGQNMNMGQFTEVLDDLSSR 360
Query: 361 LHLGNNIPTAPSTLELSPIYPSDKLRLHKETEA 393
LHLGNN+PTAPSTLELSP+YP DKLRLHKETEA
Sbjct: 361 LHLGNNLPTAPSTLELSPMYPLDKLRLHKETEA 393
|
Source: Toxoptera citricida Species: Toxoptera citricida Genus: Toxoptera Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|193591708|ref|XP_001944463.1| PREDICTED: innexin inx3-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
| >gi|66526650|ref|XP_623563.1| PREDICTED: innexin inx3 isoform 2 [Apis mellifera] gi|380014410|ref|XP_003691225.1| PREDICTED: innexin inx3-like [Apis florea] | Back alignment and taxonomy information |
|---|
| >gi|345496464|ref|XP_003427733.1| PREDICTED: innexin inx3-like isoform 1 [Nasonia vitripennis] gi|345496466|ref|XP_003427734.1| PREDICTED: innexin inx3-like isoform 2 [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
| >gi|383849583|ref|XP_003700424.1| PREDICTED: innexin inx3-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
| >gi|242014052|ref|XP_002427712.1| Innexin inx2, putative [Pediculus humanus corporis] gi|212512147|gb|EEB14974.1| Innexin inx2, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
| >gi|307210798|gb|EFN87180.1| Innexin inx3 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
| >gi|350414015|ref|XP_003490180.1| PREDICTED: innexin inx3-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|389611569|dbj|BAM19386.1| innexin 3 [Papilio xuthus] | Back alignment and taxonomy information |
|---|
| >gi|357619689|gb|EHJ72164.1| innexin 3 [Danaus plexippus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 393 | ||||||
| FB|FBgn0027108 | 367 | Inx2 "Innexin 2" [Drosophila m | 0.885 | 0.948 | 0.485 | 1e-91 | |
| UNIPROTKB|Q9XYN1 | 359 | inx2 "Innexin inx2" [Schistoce | 0.898 | 0.983 | 0.446 | 4.7e-87 | |
| UNIPROTKB|Q9XYN0 | 361 | inx1 "Innexin inx1" [Schistoce | 0.903 | 0.983 | 0.441 | 3e-85 | |
| UNIPROTKB|Q1DH70 | 372 | shakB "Innexin shaking-B" [Aed | 0.857 | 0.905 | 0.429 | 7.6e-80 | |
| UNIPROTKB|Q7PXN1 | 373 | shakB "Innexin shaking-B" [Ano | 0.860 | 0.906 | 0.426 | 5.4e-79 | |
| FB|FBgn0004646 | 362 | ogre "optic ganglion reduced" | 0.839 | 0.911 | 0.428 | 6.8e-79 | |
| FB|FBgn0085387 | 372 | shakB "shaking B" [Drosophila | 0.857 | 0.905 | 0.409 | 7.9e-78 | |
| FB|FBgn0027106 | 438 | Inx7 "Innexin 7" [Drosophila m | 0.852 | 0.764 | 0.345 | 1.2e-56 | |
| FB|FBgn0030989 | 419 | Inx5 "Innexin 5" [Drosophila m | 0.656 | 0.615 | 0.364 | 1.4e-50 | |
| FB|FBgn0024177 | 367 | zpg "zero population growth" [ | 0.860 | 0.920 | 0.310 | 5.6e-45 |
| FB|FBgn0027108 Inx2 "Innexin 2" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
Identities = 170/350 (48%), Positives = 233/350 (66%)
Query: 12 GFVKVRYLMDKAIIDNLVFRCHYRITSAMLFVSCVLVTANNLIGDPINCIADGAVPGHVI 71
G VK +D+ IDN VFR HY+ T +L +LVT+ IGDPI+CI D +P V+
Sbjct: 6 GSVKGLLKIDQVCIDNNVFRMHYKATVIILIAFSLLVTSRQYIGDPIDCIVD-EIPLGVM 64
Query: 72 NTYCWITSTFTLPHQAHKPVGSHVIHPAVGSYVEGEDEKRYHTYYQWVPFMLFFQGILFY 131
+TYCWI STFT+P + G V+ P VGS+VEGEDE +YH YYQWV F+LFFQ ILFY
Sbjct: 65 DTYCWIYSTFTVPERLTGITGRDVVQPGVGSHVEGEDEVKYHKYYQWVCFVLFFQAILFY 124
Query: 132 VPHWIWKNLEENKVRMITDGMRGAIVTSKEDRRERQKRLVQYIIDTLHMHNVYAAGYFFC 191
VP ++WK+ E +++M+ + IV E + +R+K LV Y I L+ HN YA +F C
Sbjct: 125 VPRYLWKSWEGGRLKMLVMDLNSPIVND-ECKNDRKKILVDYFIGNLNRHNFYAFRFFVC 183
Query: 192 EFLNFVNVVGNMILIDSFLGGTFFTYGTEVLKFTQLNQENRTDPMVEVFPRVTKCTFHKY 251
E LNFVNV+G + +D FL G F TYG++VLKFT+L + R DPM VFP+VTKCTFHKY
Sbjct: 184 EALNFVNVIGQIYFVDFFLDGEFSTYGSDVLKFTELEPDERIDPMARVFPKVTKCTFHKY 243
Query: 252 GSSGSIQDHDALCILALNILNEKIYILLWFWFYALAIMSFGAICYSLSVITLPSIRETIL 311
G SGS+Q HD LC+L LNI+NEKIY+ LWFWF L+IMS ++ Y ++V+ P +R +L
Sbjct: 244 GPSGSVQTHDGLCVLPLNIVNEKIYVFLWFWFIILSIMSGISLIYRIAVVAGPKLRHLLL 303
Query: 312 IRRFRFGTPAGVSALIRRTQVGDFLLLHLLGQNMNNMFFGEILDELSTNL 361
R R V + + +GD+ LL+ LG+N++ + + E++ +LS +
Sbjct: 304 RARSRLAESEEVELVANKCNIGDWFLLYQLGKNIDPLIYKEVISDLSREM 353
|
|
| UNIPROTKB|Q9XYN1 inx2 "Innexin inx2" [Schistocerca americana (taxid:7009)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9XYN0 inx1 "Innexin inx1" [Schistocerca americana (taxid:7009)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q1DH70 shakB "Innexin shaking-B" [Aedes aegypti (taxid:7159)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q7PXN1 shakB "Innexin shaking-B" [Anopheles gambiae (taxid:7165)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0004646 ogre "optic ganglion reduced" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0085387 shakB "shaking B" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0027106 Inx7 "Innexin 7" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0030989 Inx5 "Innexin 5" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0024177 zpg "zero population growth" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 393 | |||
| pfam00876 | 341 | pfam00876, Innexin, Innexin | 1e-122 | |
| PHA02748 | 360 | PHA02748, PHA02748, viral inexin-like protein; Pro | 1e-100 |
| >gnl|CDD|216168 pfam00876, Innexin, Innexin | Back alignment and domain information |
|---|
Score = 356 bits (915), Expect = e-122
Identities = 130/350 (37%), Positives = 194/350 (55%), Gaps = 24/350 (6%)
Query: 26 DNLVFRCHYRITSAMLFVSCVLVTANNLIGDPINCIADGAVPG---HVINTYCWITSTFT 82
D+ V R HY+ T +L +LV+A GDPI C PG N YCW+ +T+
Sbjct: 1 DDFVDRLHYKYTVIILLAFSLLVSAKQYFGDPIECWVPAEFPGSWEEYANNYCWVQNTYF 60
Query: 83 LPHQAHKPVGSHVIHPAVGSYVEGEDEKRYHTYYQWVPFMLFFQGILFYVPHWIWKNL-- 140
LP P + E E++Y TYYQWVPF+LF Q +LFY+PH+IWK L
Sbjct: 61 LPLGEEVPGTDPE--------EDRERERKYITYYQWVPFVLFLQALLFYIPHYIWKLLSS 112
Query: 141 -EENKVRMITDGMRGAIVTSKEDRRERQKRLVQYIIDTLHMHNV-----YAAGYFFCEFL 194
E +++ + D + AI++ ++R++R K L +Y+ D LH HN A YFFC+ L
Sbjct: 113 WEGGRLKALVDELNSAILSEPDERKKRIKPLARYLDDNLHSHNRYYGNYLAYLYFFCKLL 172
Query: 195 NFVNVVGNMILIDSFLGGTFFTYGTEVLKFTQLNQENRTDPMVEVFPRVTKCTFHKYGSS 254
N +NV+G + L++ FLGG F YG +VL LN E+ TD V FPRVTKC F
Sbjct: 173 NLINVIGQIFLLNRFLGGDFHFYGIDVLAD-LLNGEDWTDSGV--FPRVTKCDFEIRKLG 229
Query: 255 GSIQDHDALCILALNILNEKIYILLWFWFYALAIMSFGAICYSLSVITLPSIRETILIRR 314
GS+Q++ C+L +NI NEKI+I LWFWF LAI+S ++ Y ++ + PS R + +
Sbjct: 230 GSVQNYTVQCVLPINIFNEKIFIFLWFWFVFLAIISVLSLLYWIATLLSPSRRVSFRKKL 289
Query: 315 FRF-GTPAGVSALIRR-TQVGDFLLLHLLGQNMNNMFFGEILDELSTNLH 362
R + +R ++ + LL +L +N+ ++ + E+++EL
Sbjct: 290 LRASSKLNPLDKFVRDYLRIDGWFLLRMLAKNLGDLVYKELIEELWQRFR 339
|
This family includes the drosophila proteins Ogre and shaking-B, and the C. elegans proteins Unc-7 and Unc-9. Members of this family are integral membrane proteins which are involved in the formation of gap junctions. This family has been named the Innexins. Length = 341 |
| >gnl|CDD|165115 PHA02748, PHA02748, viral inexin-like protein; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 393 | |||
| PHA02748 | 360 | viral inexin-like protein; Provisional | 100.0 | |
| PF00876 | 348 | Innexin: Innexin; InterPro: IPR000990 The pannexin | 100.0 |
| >PHA02748 viral inexin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-111 Score=842.98 Aligned_cols=355 Identities=37% Similarity=0.734 Sum_probs=335.0
Q ss_pred hHHHHHHhhhhhhhhcccccccccccceeeehhhhHHHHHHHHHHHhhhhhcCCCeeeecCCCCCcccccceeeeeeeee
Q psy8408 3 VFAMVSAMAGFVKVRYLMDKAIIDNLVFRCHYRITSAMLFVSCVLVTANNLIGDPINCIADGAVPGHVINTYCWITSTFT 82 (393)
Q Consensus 3 m~~~~~~l~~~l~~~~~~~~~~~Dd~vdRL~y~~Tv~lL~~~s~lvs~kqy~G~PI~C~~P~~f~~~y~~~yCwi~~Ty~ 82 (393)
|.+++++|++++|++ ++.+||++|||||++|+++|++||+++|+|||||+||+||+|+++ ++|+|+||||||||+
T Consensus 1 M~~~~~~l~~~lk~~----~v~~Dd~vdrLhy~~Tv~iL~~~silvs~kQy~G~PI~C~~p~~~-~~~~n~yCwi~~Ty~ 75 (360)
T PHA02748 1 MLDLFSALRGLLKVQ----SVSIDNNFFRLHYKITVIILLAFSLLVTSRQYFGDPIDCDFPDYP-NGSLNTYCYVQSTFL 75 (360)
T ss_pred ChhHHHHHHHhhCcc----eeeccchhheehHHHHHHHHHHHHHHHHHHHHCCCCeEeccCCCc-cchhhceeeeeeEEE
Confidence 589999999999997 999999999999999999999999999999999999999999766 579999999999999
Q ss_pred ecCCCCCCCCccccCCCCCCCCCCcccceeeeecchhHHHHHHHHHhhhhhhHHHhhhccCcHHHHHHhhhhhcCCCHHH
Q psy8408 83 LPHQAHKPVGSHVIHPAVGSYVEGEDEKRYHTYYQWVPFMLFFQGILFYVPHWIWKNLEENKVRMITDGMRGAIVTSKED 162 (393)
Q Consensus 83 vp~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~YYQWVpfvL~lQA~lFylP~~iWk~~~~~~l~~l~~~~~~~~~~~~~~ 162 (393)
+|.+.....+.++|+||++++ .+++++++++|||||||+|++||++||+|+++||.++||++++++.+++.+..+ +++
T Consensus 76 v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~YYQWVpfvL~lQA~lFYiP~~iWk~~egg~i~~l~~~~~~~~~~-~~~ 153 (360)
T PHA02748 76 VERKVTHTVNSTVPDPGVSGD-TEEDELRYYGYYQWVFITLFLQAVFFYIPHYIWKAWEGGKMKMLAVELASPVLS-KDC 153 (360)
T ss_pred eecccccccccccCCCCCCCC-ccccceeEeceeeHHHHHHHHHHHHHHchHHHHHHhccCcHHHHHHhhccccCC-HHH
Confidence 999887777777888888765 566788999999999999999999999999999999999999999888765544 888
Q ss_pred HHHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHHHHHHHHHHhCCccccchHHHHHhhccccCCcCCCCcccCCe
Q psy8408 163 RRERQKRLVQYIIDTLHMHNVYAAGYFFCEFLNFVNVVGNMILIDSFLGGTFFTYGTEVLKFTQLNQENRTDPMVEVFPR 242 (393)
Q Consensus 163 r~~~~~~l~~~~~~~~~~~~~~~~~Y~~~K~L~l~Nvv~Q~~ll~~FLg~~~~~~G~~vl~~~~~~~~~~~~~~s~~FPR 242 (393)
|+++++.+++|+.++++.|+.|+..|++||+||++|+++|+++||+|||+++..||++++.+...++++|+||++++|||
T Consensus 154 ~~~~i~~l~~y~~~~l~~h~~y~~~Y~~~klL~l~Nvi~Qi~lmn~FLg~~f~~yG~~vl~~~~~~~~~~~~~~s~~FPr 233 (360)
T PHA02748 154 IEKNTQPLVDYFFMNLHSHNAYAYKYFTCELLNLINIVGQIQFMNIFIGEDFQLYGIYVIFFNQEAGKSMTNPMERLFPT 233 (360)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhccHHHHhhhhhccccccCcccCccCc
Confidence 99999999999999999999999999999999999999999999999999999999999987766678999999999999
Q ss_pred eeeeeeeeecCCCCcceeeeeeeecccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHhhhhccCChhh
Q psy8408 243 VTKCTFHKYGSSGSIQDHDALCILALNILNEKIYILLWFWFYALAIMSFGAICYSLSVITLPSIRETILIRRFRFGTPAG 322 (393)
Q Consensus 243 VT~Cdf~~~~~~Gnv~~~tvqCvLpiN~~NEKIfifLWFW~v~l~vit~~~li~w~~~l~~~~~R~~~i~~~l~~~~~~~ 322 (393)
||+|||+++|++||+|+||+|||||+||+|||||+||||||++|+++|++++++|++++++++.|.++++.+.+..+++.
T Consensus 234 vT~C~f~~~~~~G~~~~~~~qCVLpiN~~NEKIfiFLWFW~~~lav~t~~~~~~~i~~~~~~~~R~~~ir~~~~~~~~~~ 313 (360)
T PHA02748 234 VTKCTYEKYGPSGTPENIEGICLLTQNSLNEKIYVFLWFWFHILAVISAFVVIYRIATLLSSSLRLYMFRSSSSLNRADD 313 (360)
T ss_pred ceeeeeeeecCCCCcceeeeEEEechhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHhhccCCHHH
Confidence 99999998889999999999999999999999999999999999999999999999999999999999999888777888
Q ss_pred HHHhhhccCCCcEEehhhhhhccChhHHHHHHHHHHHhccCC
Q psy8408 323 VSALIRRTQVGDFLLLHLLGQNMNNMFFGEILDELSTNLHLG 364 (393)
Q Consensus 323 i~~~~~~~~~dg~flL~~i~~N~g~lv~~elv~~L~~~~~~~ 364 (393)
++.+.++++.||||+||||++|+|+++++||+.+||++++++
T Consensus 314 ~~~v~~~l~~ddwFlL~~l~~N~~~~~~~eli~~L~~~~~~~ 355 (360)
T PHA02748 314 IAVVYNKLQIGDWFLLHMLRKNINPLAYKELISRLAQHFDVS 355 (360)
T ss_pred HHHHHHhCCcCCEEEhhHhhhhCChHHHHHHHHHHHHHcccc
Confidence 899999999999999999999999999999999999999755
|
|
| >PF00876 Innexin: Innexin; InterPro: IPR000990 The pannexin family combines invertebrate gap junction proteins and their vertebrate homologs | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 393 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-06 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.9 bits (113), Expect = 5e-06
Identities = 48/371 (12%), Positives = 97/371 (26%), Gaps = 137/371 (36%)
Query: 17 RYLMDKA------IIDNLVFRCHYRITSAMLFVSC-VLVTANNL-IGDPINCIADGAVP- 67
R L K ++ N+ + + +A SC +L+T + D ++ +
Sbjct: 236 RLLKSKPYENCLLVLLNV---QNAKAWNAFNL-SCKILLTTRFKQVTDFLSAATTTHISL 291
Query: 68 GHVINTYC----------WI-TSTFTLPHQAHKPVGSHVIHP------------------ 98
H T ++ LP + +P
Sbjct: 292 DHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT------TNPRRLSIIAESIRDGLATWD 345
Query: 99 ------------AVGSYVEGEDEKRYHTYYQ---------WVPFMLFFQGILFYVPHWIW 137
+ S + + Y + +P +L ++ W
Sbjct: 346 NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILL--SLI-------W 396
Query: 138 KNLEENKVRMITDGMRGA--------------------IVTSKEDRRERQKRLV-QYII- 175
++ ++ V ++ + + + E+ + +V Y I
Sbjct: 397 FDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIP 456
Query: 176 ---DTLHMHNVYAAGYFFC-------------EFLNFVNVVGNMILID-SFLG------G 212
D+ + Y YF+ F M+ +D FL
Sbjct: 457 KTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLF-----RMVFLDFRFLEQKIRHDS 511
Query: 213 TFFTYGTEVLK-FTQLN------QENRTDPMVEVFPRVTKCTFHKYGSSGSIQDHDALCI 265
T + +L QL +N DP E K + + L
Sbjct: 512 TAWNASGSILNTLQQLKFYKPYICDN--DPKYERLVNAILDFLPKIEENLICSKYTDLLR 569
Query: 266 LALNILNEKIY 276
+AL +E I+
Sbjct: 570 IALMAEDEAIF 580
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00