Psyllid ID: psy8430

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-
Protein Sequence
MPQSDTMSQKSTKHKRTASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHcccccccccccHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEccccccccEEEEEEcccccEEEEEEcccccEEEEEccccccccEEEEccccccccEEEEEEEEcccccEEEEEEcccccEEEEEcccccEEEEcccccEEEEEEccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEcccccccEEEEEEcccccEEEEccccEEEEcccccEEEEEEcccccEEEEcccccEEEEEEccccEEEEEccccccccEEEEEcccccEEEccccEEEEEcccccccccEEEEEEccccEEcc
Secondary Structure Prediction (SSPRO)
cccccccccccccHEEEEccccccEEEEEEcccccEccccccccccccccccEEEEccccccEEEEEEEcccccEEEcccccEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEcccccEEEEEEEcccccccccccEEEEEEcccccEEEEEEcccccEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEcccccEEEEEEcccccEEEEcccccEEEEEEcccccEEEcccEEEEEccccccEEEEEEcccccEEEEcccccEEEEEEcccccEEEEEccccccEEEEEEcccccEEEEcccccEEEEEEcccccEEEEEEEcccccEcc
Coil and Loop (DISEMBL)
mpqsdtmsqkstkhkrtasgklsnlgdqdLSMLRTHlnseyddvvlpssvkfkLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESiinekypecndmecVTNMNknfnkqkvlasnpsaqklkttnklkVQTSKIVSSFKTSLLSCYKIrsfsghrdgvwdvavrpgqpvlgsasadRTVRLWStqtgkcvlqysghsgsvnsvrflpnkdlvlsasgdksVHIWQAVINWeclnndndsdldeskepdessitlrtPVKELLGHSNVVIaadwlsdgeQVITASWDRVANlfdvetgtilqsltghdeephilcVSSYYSkvscdlfqriqhldcgtsenpihsvcvfqdiqstg
Flexible Loop (DISEMBL)
mpqsdtmsqkstkhkrtasgklsnlgdQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLasnpsaqklkttnklkvqtskivssfktslLSCYKIRSFSGHRDGVWDVAVRPGQpvlgsasadrtvRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITlrtpvkellgHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG
Low Complexity Region (SEG)
MPQSDTMSQKSTKHKRTASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFellylenlnlQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEClnndndsdldESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG
Disordered region (IsUnstruct)
**********************************THLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMN*************************VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLN***********************VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQD*****
Disordered Region (DISOPRED)
**********************************THLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKID*************EKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQS**
Disordered Region (DISEMBL)
*******************GKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDND************SITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG
Disordered Region (DISPRO)
***********TKHKRTASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQ******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPQSDTMSQKSTKHKRTASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	361	2.2.26 [Sep-21-2011]
Q5R650	495	WD repeat-containing prot	yes	N/A	0.911	0.664	0.416	1e-62
A4IIX9	494	WD repeat-containing prot	yes	N/A	0.911	0.665	0.417	5e-62
Q8CBE3	496	WD repeat-containing prot	yes	N/A	0.825	0.600	0.434	6e-62
Q9Y2I8	494	WD repeat-containing prot	yes	N/A	0.911	0.665	0.409	7e-62
Q6DDF0	495	WD repeat-containing prot	N/A	N/A	0.908	0.662	0.422	6e-61
B3S4I5	409	Lissencephaly-1 homolog O	N/A	N/A	0.437	0.386	0.311	4e-16
Q00808	1356	Vegetative incompatibilit	no	N/A	0.559	0.148	0.271	7e-16
Q8YRI1	1526	Uncharacterized WD repeat	no	N/A	0.434	0.102	0.302	4e-15
Q8YTC2	1258	Uncharacterized WD repeat	no	N/A	0.554	0.158	0.286	6e-15
Q5M786	334	WD repeat-containing prot	no	N/A	0.376	0.407	0.308	5e-14

>sp|Q5R650|WDR37_PONAB WD repeat-containing protein 37 OS=Pongo abelii GN=WDR37 PE=2 SV=1

 Score =  240 bits (613), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 156/375 (41%), Positives = 214/375 (57%), Gaps = 46/375 (12%)

Query: 8   SQKSTKHKRTA---SGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIERE 64
           + + TK KR +   S + +N  +Q+ + L   +  E  D  LPSSV+  L  LF QIERE
Sbjct: 10  TARQTKQKRKSHSLSIRRTNSSEQERTGLPRDM-LEGQDSKLPSSVRSTLLELFGQIERE 68

Query: 65  FELLYLENLNLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSA 124
           FE LY+ENL L+ +ID L E+L  E             + +     +  + K  AS+ ++
Sbjct: 69  FENLYIENLELRREIDTLNERLAAEG------------QAIDGAELSKGQLKTKASHSTS 116

Query: 125 Q---KLKTTNKLKVQTSKIVSSFKT--SLLSCYKIRSFSGHRDGVWDVAVRPGQPV-LGS 178
           Q   KLKTT   K  TSKIVSSFKT  S  +C  ++ + GHRDG+WDV+V   QPV LG+
Sbjct: 117 QLSQKLKTT--YKASTSKIVSSFKTTTSRAACQLVKEYIGHRDGIWDVSVAKTQPVVLGT 174

Query: 179 ASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW-------- 230
           ASAD T  LWS +TGKC+++Y+GH GSVNS++F P++ L L+ASGD++ HIW        
Sbjct: 175 ASADHTALLWSIETGKCLVKYAGHVGSVNSIKFHPSEQLALTASGDQTAHIWRYAVQLPT 234

Query: 231 -QAVINWECLNNDNDSDLDESKEPD------ESSITLRTPVKELLGHSNVVIAADWLSDG 283
            Q V +   ++ +++ +  +  EPD          T+R P+  L  H  VVIAADWL  G
Sbjct: 235 PQPVADTSQISGEDEVECSDKDEPDLDGDVSSDCPTIRVPLTSLKSHQGVVIAADWLVGG 294

Query: 284 EQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSKV---SCDLFQRIQHLD 340
           +Q +TASWDR ANL+DVET  ++ SLTGHD+E    C       V   S D   R+    
Sbjct: 295 KQAVTASWDRTANLYDVETSELVHSLTGHDQELTHCCTHPTQRLVVTSSRDTTFRLWDF- 353

Query: 341 CGTSENPIHSVCVFQ 355
               +  IHSV VFQ
Sbjct: 354 ---RDPSIHSVNVFQ 365

Pongo abelii (taxid: 9601)

>sp|A4IIX9|WDR37_XENTR WD repeat-containing protein 37 OS=Xenopus tropicalis GN=wdr37 PE=2 SV=1

 Score =  238 bits (607), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 156/374 (41%), Positives = 209/374 (55%), Gaps = 45/374 (12%)

Query: 8   SQKSTKHKRTA---SGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIERE 64
           + + TK KR +   S K +N  +QD   L+  +  E  D  LPSSV+  L  LF QIERE
Sbjct: 10  AARQTKQKRKSHSLSIKRTNSSEQDRPGLQREM-LEGQDSKLPSSVRNTLLELFGQIERE 68

Query: 65  FELLYLENLNLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSA 124
           FE LYLENL L+ +ID L ++L  E             + +     +  + K  AS+ ++
Sbjct: 69  FENLYLENLELRREIDTLNDRLAVEG------------QAIDGAELSKGQMKTKASHSTS 116

Query: 125 Q---KLKTTNKLKVQTSKIVSSFKT--SLLSCYKIRSFSGHRDGVWDVAVRPGQPV-LGS 178
           Q   KLKTT   K  TSKIVSSFKT  S   C  ++ + GHRDG+WDV+V   QPV LG+
Sbjct: 117 QLSQKLKTT--YKASTSKIVSSFKTTTSRAICQLVKDYVGHRDGLWDVSVTRTQPVVLGT 174

Query: 179 ASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC 238
           ASAD T  LWS +TGKC+++Y GH+GSVNS++F P + + L+ASGD++ HIW+ ++    
Sbjct: 175 ASADHTALLWSIETGKCLIKYVGHAGSVNSIKFHPTEQIALTASGDQTAHIWRYMVQLPT 234

Query: 239 LNNDNDSDLDESKEPDESS--------------ITLRTPVKELLGHSNVVIAADWLSDGE 284
                D+ +   +E D S                T+R P+  L  H  VVIAADWL  G+
Sbjct: 235 PQPTADTSISGEEEVDFSDKDENDGDGDASSDCPTVRVPLTALKSHQGVVIAADWLVGGK 294

Query: 285 QVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSKV---SCDLFQRIQHLDC 341
           Q +TASWDR ANL+DVET  ++ SLTGHD+E    C       V   S D   R+     
Sbjct: 295 QAVTASWDRTANLYDVETSELVHSLTGHDQELTHCCTHPTQRLVVTSSRDTTFRLWDF-- 352

Query: 342 GTSENPIHSVCVFQ 355
              +  IHSV VFQ
Sbjct: 353 --RDPSIHSVNVFQ 364

Xenopus tropicalis (taxid: 8364)

>sp|Q8CBE3|WDR37_MOUSE WD repeat-containing protein 37 OS=Mus musculus GN=Wdr37 PE=2 SV=1

 Score =  238 bits (607), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 148/341 (43%), Positives = 198/341 (58%), Gaps = 43/341 (12%)

Query: 40  EYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIINEKYPEC 99
           E  D  LPSSV+  L  LF QIEREFE LY+ENL L+ +ID L E+L  E          
Sbjct: 44  EGQDSKLPSSVRSTLLELFGQIEREFENLYIENLELRREIDTLNERLAGEG--------- 94

Query: 100 NDMECVTNMNKNFNKQKVLASNPSAQ---KLKTTNKLKVQTSKIVSSFKT--SLLSCYKI 154
              + +     +  + K  AS+ ++Q   KLKTT   K  TSKIVSSFKT  S   C  +
Sbjct: 95  ---QAIDGAELSKGQLKTKASHSTSQLSQKLKTT--YKASTSKIVSSFKTTTSRAICQLV 149

Query: 155 RSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           + + GHRDG+WDV+V   QP VLG+ASAD T  LWS +TGKC+++Y+GH GSVNS++F P
Sbjct: 150 KEYIGHRDGIWDVSVTRTQPIVLGTASADHTALLWSIETGKCLVKYAGHVGSVNSIKFHP 209

Query: 214 NKDLVLSASGDKSVHIWQAVINW----------ECLNNDNDSDLDESKEPD------ESS 257
           ++ L L+ASGD++ HIW+ V+            + ++ +++ +  +  EPD         
Sbjct: 210 SEQLALTASGDQTAHIWRYVVQLPTPQPVADTSQQISGEDEIECSDKDEPDIDGDVSSDC 269

Query: 258 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPH 317
            T+R P+  L  H  VVIAADWL  G+QV+TASWDR ANL+DVET  ++ SLTGHD+E  
Sbjct: 270 PTVRVPLTSLKSHQGVVIAADWLVGGKQVVTASWDRTANLYDVETSELVHSLTGHDQELT 329

Query: 318 ILCVSSYYSKV---SCDLFQRIQHLDCGTSENPIHSVCVFQ 355
             C       V   S D   R+        +  IHSV VFQ
Sbjct: 330 HCCTHPTQRLVVTSSRDTTFRLWDF----RDPSIHSVNVFQ 366

Mus musculus (taxid: 10090)

>sp|Q9Y2I8|WDR37_HUMAN WD repeat-containing protein 37 OS=Homo sapiens GN=WDR37 PE=2 SV=2

 Score =  238 bits (606), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 153/374 (40%), Positives = 213/374 (56%), Gaps = 45/374 (12%)

Query: 8   SQKSTKHKRTA---SGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIERE 64
           + + TK KR +   S + +N  +Q+ + L   +  E  D  LPSSV+  L  LF QIERE
Sbjct: 10  TARQTKQKRKSHSLSIRRTNSSEQERTGLPRDM-LEGQDSKLPSSVRSTLLELFGQIERE 68

Query: 65  FELLYLENLNLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSA 124
           FE LY+ENL L+ +ID L E+L  E             + +     +  + K  AS+ ++
Sbjct: 69  FENLYIENLELRREIDTLNERLAAEG------------QAIDGAELSKGQLKTKASHSTS 116

Query: 125 Q---KLKTTNKLKVQTSKIVSSFKT--SLLSCYKIRSFSGHRDGVWDVAVRPGQPV-LGS 178
           Q   KLKTT   K  TSKIVSSFKT  S  +C  ++ + GHRDG+WDV+V   QPV LG+
Sbjct: 117 QLSQKLKTT--YKASTSKIVSSFKTTTSRAACQLVKEYIGHRDGIWDVSVAKTQPVVLGT 174

Query: 179 ASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC 238
           ASAD T  LWS +TGKC+++Y+GH GSVNS++F P++ L L+ASGD++ HIW+  +    
Sbjct: 175 ASADHTALLWSIETGKCLVKYAGHVGSVNSIKFHPSEQLALTASGDQTAHIWRYAVQLPT 234

Query: 239 --------LNNDNDSDLDESKEPD------ESSITLRTPVKELLGHSNVVIAADWLSDGE 284
                   ++ +++ +  +  EPD          T+R P+  L  H  VVIA+DWL  G+
Sbjct: 235 PQPVADTSISGEDEVECSDKDEPDLDGDVSSDCPTIRVPLTSLKSHQGVVIASDWLVGGK 294

Query: 285 QVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSKV---SCDLFQRIQHLDC 341
           Q +TASWDR ANL+DVET  ++ SLTGHD+E    C       V   S D   R+     
Sbjct: 295 QAVTASWDRTANLYDVETSELVHSLTGHDQELTHCCTHPTQRLVVTSSRDTTFRLWDF-- 352

Query: 342 GTSENPIHSVCVFQ 355
              +  IHSV VFQ
Sbjct: 353 --RDPSIHSVNVFQ 364

Homo sapiens (taxid: 9606)

>sp|Q6DDF0|WDR37_XENLA WD repeat-containing protein 37 OS=Xenopus laevis GN=wdr37 PE=2 SV=1

 Score =  234 bits (598), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 159/376 (42%), Positives = 211/376 (56%), Gaps = 48/376 (12%)

Query: 8   SQKSTKHKRTA---SGKLSNLGDQD-LSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIER 63
           + + TK KR +   S K +N  +QD L + R  L  E  D  LP SV+  L  LF QIER
Sbjct: 10  AARQTKQKRKSHSLSIKRTNSSEQDRLGLQRDML--EGQDSKLPPSVRNTLLELFGQIER 67

Query: 64  EFELLYLENLNLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPS 123
           EFE LYLENL L+ +ID L ++L  E             + +     +  + K  AS+ +
Sbjct: 68  EFENLYLENLELRREIDTLNDRLAVEG------------QAIDGAELSKGQMKTKASHST 115

Query: 124 AQ---KLKTTNKLKVQTSKIVSSFKT--SLLSCYKIRSFSGHRDGVWDVAVRPGQPV-LG 177
           +Q   KLKTT   K  TSKIVSSFKT  S   C  ++ + GHRDG+WDV+V   QPV LG
Sbjct: 116 SQLSQKLKTT--YKASTSKIVSSFKTTTSRAICQLVKDYVGHRDGLWDVSVTRTQPVVLG 173

Query: 178 SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE 237
           +ASAD T  LWS +TGKC+++Y GH+GSVNS++F P + + L+ASGD++ HIW+ ++   
Sbjct: 174 TASADHTALLWSIETGKCLIKYVGHAGSVNSIKFHPTEQIALTASGDQTAHIWRYMVQLP 233

Query: 238 CLNNDND------------SDLDESKEPDESS---ITLRTPVKELLGHSNVVIAADWLSD 282
                 D            SD DE+    ++S    T+R P+  L  H  VVIAADWL  
Sbjct: 234 TPQPMADTSQISGEEEVDFSDKDENDGDGDASSDCPTVRVPLTALKSHQGVVIAADWLVG 293

Query: 283 GEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSKV---SCDLFQRIQHL 339
           G+Q +TASWDR ANL+DVET  ++ SLTGHD+E    C       V   S D   R+   
Sbjct: 294 GKQAVTASWDRTANLYDVETSELVHSLTGHDQELTHCCTHPTQRLVVTSSRDTTFRLWDF 353

Query: 340 DCGTSENPIHSVCVFQ 355
                +  IHSV VFQ
Sbjct: 354 ----RDPSIHSVNVFQ 365

Xenopus laevis (taxid: 8355)

>sp|B3S4I5|LIS1_TRIAD Lissencephaly-1 homolog OS=Trichoplax adhaerens GN=TRIADDRAFT_50647 PE=3 SV=1

 Score = 85.9 bits (211), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 93/196 (47%), Gaps = 38/196 (19%)

Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
           R+  GH D V D+A      +L S+SAD TV++W  QT +C +   GH  +V+SV FLP+
Sbjct: 143 RTLRGHTDSVQDLAFDSSGKLLASSSADMTVKIWDFQTFECRMTLRGHDHNVSSVCFLPS 202

Query: 215 KDLVLSASGDKSVHIWQAVINWECLNN-------------DNDSDLDESKEPDES----S 257
            D +LS+S DK++ +W+    + C+ N              +D  L  S   D++    S
Sbjct: 203 GDFLLSSSRDKTIKMWEVATGY-CVYNFEGHREWVRRVAVASDGSLMASCSNDQTVRIWS 261

Query: 258 ITLRTPVKELLGHSNVVIAADWLSD--------------------GEQVITASWDRVANL 297
           ++ +   +EL GH +VV    W  +                    G  + + S DRV  +
Sbjct: 262 LSSKECKEELRGHEHVVECIKWAPESCNRYINEASGTEVPKGQKSGPFLASGSRDRVIKI 321

Query: 298 FDVETGTILQSLTGHD 313
           +DV T   L SL GHD
Sbjct: 322 WDVTTAVCLFSLVGHD 337

Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes.

Trichoplax adhaerens (taxid: 10228)

>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina GN=HET-E1 PE=4 SV=1

 Score = 85.1 bits (209), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 100/225 (44%), Gaps = 23/225 (10%)

Query: 104  CVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDG 163
            C   +  + +    +A +P  Q++ + +       K +  + T+  +C   ++  GH   
Sbjct: 959  CTQTLEGHGSSVLSVAFSPDGQRVASGSG-----DKTIKIWDTASGTC--TQTLEGHGGS 1011

Query: 164  VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG 223
            VW VA  P    + S S D+T+++W T +G C     GH G V SV F P+   V S S 
Sbjct: 1012 VWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSD 1071

Query: 224  DKSVHIWQAVIN--WECLNNDNDSDLDESKEPDESSI-------TLR-------TPVKEL 267
            D ++ IW AV     + L    DS    +  PD   +       T++       T  + L
Sbjct: 1072 DHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTL 1131

Query: 268  LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
             GH   V +  +  DG++V + S D    ++D  +GT  Q+L GH
Sbjct: 1132 EGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGH 1176

Responsible for vegetative incompatibility through specific interactions with different alleles of the unlinked gene, het-c.

Podospora anserina (taxid: 5145)

>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1

 Score = 82.4 bits (202), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 88/175 (50%), Gaps = 18/175 (10%)

Query: 156  SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
            +F GH   V  V   P   +L S S+D+TVRLW   + KC+  + GH+  VNSV F P+ 
Sbjct: 1237 TFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDG 1296

Query: 216  DLVLSASGDKSVHIWQAVINWECLNN-------------DNDSDLDESKEPDES----SI 258
             ++ S SGD++V +W+ + + +CL+                D  +  S   D++    SI
Sbjct: 1297 SMLASGSGDQTVRLWE-ISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSI 1355

Query: 259  TLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
            +    +   LGH+N V +  +  DG  + + S D+   L+ + +G  L +L GH+
Sbjct: 1356 SSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHN 1410

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1

 Score = 82.0 bits (201), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 105/237 (44%), Gaps = 37/237 (15%)

Query: 99   CNDMECVTNMNKNFNKQKVLASNPSAQKL------KTTNKLKVQTSKIVSSFKTSLLSCY 152
            C   +C+     N +    +A +P  Q L      KT      QT K +SS +       
Sbjct: 923  CRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLE------- 975

Query: 153  KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
                  GH D ++ +A  P    L SAS D +VRLW+  TG+C      H+  V +V F 
Sbjct: 976  ------GHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFH 1029

Query: 213  PNKDLVLSASGDKSVHIWQAVINWEC---LNNDNDSDLDESKEPD---------ESSITL 260
            P   ++ + S D +V +W  +   +C   L+  +D  L  +  PD         + S+ L
Sbjct: 1030 PQGKIIATGSADCTVKLWN-ISTGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRL 1088

Query: 261  -----RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
                    V  L GHSN V +A +  +GE + T S D+   ++D + G  L++LTGH
Sbjct: 1089 WDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGH 1145

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

>sp|Q5M786|WDR5_XENTR WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2 SV=1

 Score = 79.0 bits (193), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 26/162 (16%)

Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
           ++ SGH+ G+ DVA      +L SAS D+T+++W   +GKC+    GHS  V    F P 
Sbjct: 81  KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140

Query: 215 KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVV 274
            +L++S S D+SV IW  V   +CL                         K L  HS+ V
Sbjct: 141 SNLIVSGSFDESVRIWD-VKTGKCL-------------------------KTLPAHSDPV 174

Query: 275 IAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEP 316
            A  +  DG  ++++S+D +  ++D  +G  L++L   D  P
Sbjct: 175 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216

Contributes to histone modification. May position the N-terminus of histone H3 for efficient trimethylation at 'Lys-4'. As part of the MLL1/MLL complex it is involved in methylation and dimethylation at 'Lys-4' of histone H3. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation. As part of the NSL complex it may be involved in acetylation of nucleosomal histone H4 on several lysine residues. May regulate osteoblasts differentiation.

Xenopus tropicalis (taxid: 8364)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	361
383863272	507	PREDICTED: WD repeat-containing protein	0.886	0.631	0.483	1e-81
307183988	509	WD repeat-containing protein 37 [Campono	0.933	0.662	0.434	2e-81
307199085	512	WD repeat-containing protein 37 [Harpegn	0.847	0.597	0.462	2e-80
322802316	471	hypothetical protein SINV_12250 [Solenop	0.933	0.715	0.427	8e-80
357621111	466	hypothetical protein KGM_07136 [Danaus p	0.864	0.669	0.486	2e-79
340724308	514	PREDICTED: WD repeat-containing protein	0.897	0.630	0.460	4e-79
350420808	515	PREDICTED: WD repeat-containing protein	0.897	0.629	0.454	9e-79
380021536	510	PREDICTED: WD repeat-containing protein	0.961	0.680	0.435	3e-78
328787768	510	PREDICTED: WD repeat-containing protein	0.961	0.680	0.432	4e-78
156551275	508	PREDICTED: WD repeat-containing protein	0.883	0.627	0.463	1e-77

>gi|383863272|ref|XP_003707105.1| PREDICTED: WD repeat-containing protein 37-like [Megachile rotundata]

 Score =  309 bits (792), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 166/343 (48%), Positives = 224/343 (65%), Gaps = 23/343 (6%)

Query: 28  QDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLD 87
           Q  +  RT L    DD VLP +++ +L  LF QIE+EFE LY ENL LQ+KID L E+LD
Sbjct: 47  QHYAAFRTDL----DDSVLPPALRCRLFDLFQQIEKEFEALYAENLGLQEKIDALNERLD 102

Query: 88  RESI-INEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKT 146
           RE     E+     D+    +  K+F+KQK +A N + +   T+NKLK QTSKIVSSFKT
Sbjct: 103 RECYGSGERSLPIGDVADFPD-TKSFSKQKSMAGNSAPKTKTTSNKLKAQTSKIVSSFKT 161

Query: 147 SLLSCYKIRSFSGHRDGVWDVAV-RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS 205
             ++C   R +SGHRDGVW+V+V R GQ ++ +ASAD + R+W+  +G+C+LQY GHSGS
Sbjct: 162 PTMTCSMQREYSGHRDGVWEVSVGRSGQ-IIATASADHSARVWAVDSGRCLLQYIGHSGS 220

Query: 206 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWE------------CLNND-NDSDLDESKE 252
           VNSVRF P K+L L++SGD S H+WQA ++W+             LN D N S++    E
Sbjct: 221 VNSVRFHPTKELALTSSGDNSAHVWQAAVDWDFPKRQNSSEELSGLNTDRNPSNVITVNE 280

Query: 253 PDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
             +   TLRTPV+ELLGH+ VV+AADWL D EQ++TASWDR ANL+DVETG I+ +L GH
Sbjct: 281 EQDEPPTLRTPVRELLGHTGVVMAADWLPDAEQIVTASWDRTANLYDVETGEIIHTLCGH 340

Query: 313 DEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQ 355
           D+E  +  VS+++++  C    +           P+HSV VFQ
Sbjct: 341 DQE--LSHVSTHHTQRLCVTSSKDSTFRLWDFREPVHSVSVFQ 381

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307183988|gb|EFN70559.1| WD repeat-containing protein 37 [Camponotus floridanus]

 Score =  309 bits (791), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 172/396 (43%), Positives = 240/396 (60%), Gaps = 59/396 (14%)

Query: 2   PQSDTMSQKSTKHKRTASGKLSNLGDQDL-------------SMLRTHLNSEYDDVVLPS 48
           P + T ++ S K KR +  ++ +  D +L             ++      SE +D  +P 
Sbjct: 5   PSATTGNKSSGKAKRISIPRVQSSTDTELQSQQSGSTPLQPTALHYVSFRSELEDSPIPP 64

Query: 49  SVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIINEK----------YPE 98
           +++ +L  LF QIE+EFE+LY ENL LQ+KID+L +KL+RE   + +          YPE
Sbjct: 65  TLRCRLYDLFQQIEKEFEMLYTENLGLQEKIDILNDKLERECYGSGERSLPPGDLTDYPE 124

Query: 99  CNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFS 158
                      KN +KQK + +N SAQK+KT++KLK QTSKIVSSFKT  ++C   R + 
Sbjct: 125 ----------TKNLSKQKSMGAN-SAQKIKTSHKLKAQTSKIVSSFKTPSMTCTMQREYV 173

Query: 159 GHRDGVWDVAV-RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL 217
           GHRDGVW+++V R GQP++ +ASAD T R+W+  + +C+LQY GHSGSVNSVRF PN++L
Sbjct: 174 GHRDGVWEISVSRSGQPIIATASADHTARIWAIDSSRCLLQYIGHSGSVNSVRFHPNREL 233

Query: 218 VLSASGDKSVHIWQAVINWE------------------CLNNDNDSDLDESKEPDESSIT 259
            LSASGD S H+WQA ++W+                     N+  S  DE ++P     T
Sbjct: 234 ALSASGDGSAHVWQAAVDWDMPKRVPSLEELPVASSERSATNNLISTNDEQEDPP----T 289

Query: 260 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHIL 319
           LRTP++ELLGHS+VV+AADWL   EQ++TASWDR ANL+D ETG I+ +L GHD+E  + 
Sbjct: 290 LRTPIRELLGHSSVVMAADWLCGAEQLVTASWDRTANLYDTETGEIIHTLCGHDQE--LT 347

Query: 320 CVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQ 355
            VS+++ +  C    R           PIHSV VFQ
Sbjct: 348 HVSTHHMQKLCVTSSRDNTFRLWDFREPIHSVSVFQ 383

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307199085|gb|EFN79795.1| WD repeat-containing protein 37 [Harpegnathos saltator]

 Score =  305 bits (782), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 159/344 (46%), Positives = 219/344 (63%), Gaps = 38/344 (11%)

Query: 37  LNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIINEK- 95
             SE +D  +P +++ +L  LF QIE+EFE+LY ENL LQ+KID+L ++L+RE   + + 
Sbjct: 56  FRSELEDSPIPPALRCRLYDLFQQIEKEFEMLYTENLGLQEKIDILNDRLERECYGSGER 115

Query: 96  ---------YPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKT 146
                    YPE           KN +KQK + +N SAQK+K ++KLK QTSKIVSSFKT
Sbjct: 116 SLPPGDLMDYPE----------TKNLSKQKSMGAN-SAQKIKASHKLKAQTSKIVSSFKT 164

Query: 147 SLLSCYKIRSFSGHRDGVWDVAV-RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS 205
             ++    R + GHRDGVW+V+V R GQP++ +ASAD T R+W+  +G+C+LQY GHSGS
Sbjct: 165 PSMTSTMQREYVGHRDGVWEVSVGRSGQPIIATASADHTARIWAIDSGRCLLQYIGHSGS 224

Query: 206 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLN--------------NDNDSDLDESK 251
           VNSVRF PN++L LSASGD S H+WQA ++W+                     ++L  + 
Sbjct: 225 VNSVRFHPNRELALSASGDNSAHVWQAAVDWDIPKRVPSLEELPVASSERSTTNNLISNN 284

Query: 252 EPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG 311
           E  +   TLRTP++EL GH+NVV+AADWL   EQ++TASWDR ANL+D ETG I+ +L G
Sbjct: 285 EEQDDPPTLRTPIRELFGHTNVVMAADWLPGAEQLVTASWDRTANLYDTETGEIIHTLCG 344

Query: 312 HDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQ 355
           HD+E  +  VS+++++  C    R           PIHSV VFQ
Sbjct: 345 HDQE--LTHVSTHHTQRLCVTSSRDNTFRLWDFREPIHSVSVFQ 386

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322802316|gb|EFZ22712.1| hypothetical protein SINV_12250 [Solenopsis invicta]

 Score =  303 bits (776), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 170/398 (42%), Positives = 239/398 (60%), Gaps = 61/398 (15%)

Query: 2   PQSDTMSQKSTKHKRTASGKLSNLGDQDL---------------SMLRTHLNSEYDDVVL 46
           P +   S+ S+K KR +  ++ +  D +L               ++      SE +D  +
Sbjct: 5   PPATAGSKSSSKAKRISIPRVQSSTDTELQSQQSQSGSTPLQPTALHYVTFRSELEDSPI 64

Query: 47  PSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIINEK----------Y 96
           P +++ +L  LF QIE+EFE+LY ENL LQ+KID+L +KL+RE   + +          Y
Sbjct: 65  PPALRCRLYELFQQIEKEFEMLYTENLGLQEKIDILNDKLERECYGSGERSLPPGDLTDY 124

Query: 97  PECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRS 156
           PE           KN +KQK + +N SAQK+K ++KLK QTSKIVSSFKT  ++C   + 
Sbjct: 125 PE----------TKNLSKQKSMGAN-SAQKIKASHKLKAQTSKIVSSFKTPSMTCTMQKE 173

Query: 157 FSGHRDGVWDVAV-RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
           + GHRDGVW+V+V R GQ ++ +ASAD T R+W+    +C+LQY GH+GSVNSVRF PN+
Sbjct: 174 YMGHRDGVWEVSVGRSGQSIIATASADHTARIWAIDNSRCLLQYIGHNGSVNSVRFHPNR 233

Query: 216 DLVLSASGDKSVHIWQAVINWE------------------CLNNDNDSDLDESKEPDESS 257
           +L LSASGD S H+WQA ++W+                     N+  S+ DE  +P    
Sbjct: 234 ELALSASGDCSAHVWQAAVDWDMPKRVSSLEELPVAGSERSTANNLISNNDEQDDPP--- 290

Query: 258 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPH 317
            TLRTP++ELLGH++VVIAADWLS  EQ++TASWDR ANL+D ETG I+ +L GHD+E  
Sbjct: 291 -TLRTPIRELLGHTSVVIAADWLSGAEQLVTASWDRTANLYDTETGEIIHTLCGHDQE-- 347

Query: 318 ILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQ 355
           +  VS+++++  C    R           PIHSV VFQ
Sbjct: 348 LTHVSTHHTQKLCVTSSRDNTFRLWDFREPIHSVSVFQ 385

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357621111|gb|EHJ73064.1| hypothetical protein KGM_07136 [Danaus plexippus]

 Score =  302 bits (773), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 162/333 (48%), Positives = 213/333 (63%), Gaps = 21/333 (6%)

Query: 33  LRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESII 92
           L  +L  E  +  +P   + +L+ LFSQIE+EF++LY ENLNLQ+KID+L EKL+RES +
Sbjct: 18  LPNYLKMEDSESSIPPVFRCRLHELFSQIEKEFDVLYTENLNLQEKIDILSEKLERESYV 77

Query: 93  NEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCY 152
            ++  +  D        KN    KV  S  ++QK+KT++KLKVQTSKIVSSFK    SC 
Sbjct: 78  GDR--QIVDYVDFETSGKN---SKVKLSQSNSQKVKTSHKLKVQTSKIVSSFKAPTYSCQ 132

Query: 153 KIRSFSGHRDGVWDVA-VRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 211
            IR F+GH+DG+WDV   RPGQ ++G+ASAD T  +WS + GKC+LQY+GH+GSVNS+RF
Sbjct: 133 LIREFTGHKDGIWDVTTARPGQALIGTASADHTACVWSVEWGKCLLQYTGHAGSVNSIRF 192

Query: 212 LPNKDLVLSASGDKSVHIWQAVINWECLNNDND---------SDLDESKEPDESSITLRT 262
            P +D+ L++SGD + H+WQA +NW+     +            L ES  P+     LRT
Sbjct: 193 HPTRDIALTSSGDNTAHVWQAAVNWDLPRGQSSEEELDGGGEESLGESDRPE----VLRT 248

Query: 263 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
           P+ EL GH  VV+AADWL+ G+ VITASWDR ANL+DVETG  LQ LTGHD E  +   S
Sbjct: 249 PLTELSGHMGVVVAADWLTGGDHVITASWDRTANLYDVETGDCLQILTGHDHE--LTHAS 306

Query: 323 SYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQ 355
           S++S        R           PIHSV VFQ
Sbjct: 307 SHHSSRLVVTASRDTTFRLWDFREPIHSVSVFQ 339

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340724308|ref|XP_003400524.1| PREDICTED: WD repeat-containing protein 37-like [Bombus terrestris]

 Score =  301 bits (770), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 158/343 (46%), Positives = 221/343 (64%), Gaps = 19/343 (5%)

Query: 28  QDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLD 87
           Q  ++      ++ DD +LP +++ +L  LF QIE+EFE+LY ENL LQ+KID L E+L+
Sbjct: 50  QPTALHYAAFRTDPDDNILPPALRCRLFELFQQIEKEFEILYTENLGLQEKIDTLNERLE 109

Query: 88  RESI-INEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKT 146
           RE     E+     D+    +  K+ +KQK +A N + +   T+NKLK QTSKIVSSFKT
Sbjct: 110 RECYGSGERSLPLGDVADFPD-TKSLSKQKSMAGNSAPKTKTTSNKLKAQTSKIVSSFKT 168

Query: 147 SLLSCYKIRSFSGHRDGVWDVAV-RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS 205
             ++C   R + GHRDGVW+V+V R GQ ++ +ASAD + R+W+  +G+C+LQY GHSGS
Sbjct: 169 PTMTCSMQREYFGHRDGVWEVSVGRAGQ-IIATASADHSARVWAMDSGRCLLQYIGHSGS 227

Query: 206 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSD----LDESK---------E 252
           VNSVRF P K+L L++SGD S H+WQA ++W+     N S+    L   +         E
Sbjct: 228 VNSVRFHPTKELALTSSGDNSAHVWQAAVDWDLPKRQNSSEDLSGLSSDRNLSGAITLNE 287

Query: 253 PDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
             E   TLRTP++ELLGH+ VV+AADWL D EQ++TASWDR ANL+DVETG I+ +L GH
Sbjct: 288 EQEEPPTLRTPIRELLGHTGVVMAADWLPDAEQIVTASWDRTANLYDVETGEIIHTLCGH 347

Query: 313 DEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQ 355
           D+E  +  VS+++++  C    +           PIHSV VFQ
Sbjct: 348 DQE--LSHVSTHHTQRLCVTSSKDSTFRLWDFREPIHSVSVFQ 388

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350420808|ref|XP_003492632.1| PREDICTED: WD repeat-containing protein 37-like [Bombus impatiens]

 Score =  300 bits (767), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 156/343 (45%), Positives = 220/343 (64%), Gaps = 19/343 (5%)

Query: 28  QDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLD 87
           Q  ++      ++ DD +LP +++ +L  LF QIE+EFE+LY ENL LQ+KID L E+L+
Sbjct: 50  QPTALHYAAFRTDPDDNILPPALRCRLFELFQQIEKEFEILYTENLGLQEKIDTLNERLE 109

Query: 88  RESI-INEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKT 146
           RE     E+     D+    +  K+ +KQK +A N + +   T+NKLK QTSKIVSSFKT
Sbjct: 110 RECYGSGERSLPLGDVADFPD-TKSLSKQKSMAGNSAPKTKTTSNKLKAQTSKIVSSFKT 168

Query: 147 SLLSCYKIRSFSGHRDGVWDVAV-RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS 205
             ++C   R + GHRDGVW+V+V R GQ ++ +ASAD + R+W+  +G+C+LQY GHSGS
Sbjct: 169 PTMTCSMQREYFGHRDGVWEVSVGRAGQ-IIATASADHSARVWAMDSGRCLLQYIGHSGS 227

Query: 206 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSD-------------LDESKE 252
           VNSVRF P K+L L++SGD + H+WQA ++W+     N S+             +    E
Sbjct: 228 VNSVRFHPTKELALTSSGDNTAHVWQAAVDWDLPKRQNSSEDLSGLSSDRNLSGVIALNE 287

Query: 253 PDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
             E   TLRTP++ELLGH+ VV+AADWL D EQ++TASWDR ANL+DVETG I+ +L GH
Sbjct: 288 EQEEPPTLRTPIRELLGHTGVVMAADWLPDAEQIVTASWDRTANLYDVETGEIIHTLCGH 347

Query: 313 DEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQ 355
           D+E  +  VS+++++  C    +           PIHSV VFQ
Sbjct: 348 DQE--LSHVSTHHTQRLCVTSSKDSTFRLWDFREPIHSVSVFQ 388

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380021536|ref|XP_003694619.1| PREDICTED: WD repeat-containing protein 37-like [Apis florea]

 Score =  298 bits (763), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 169/388 (43%), Positives = 238/388 (61%), Gaps = 41/388 (10%)

Query: 1   MPQSDTMS--QKSTKHKRTASGKLSNLGDQDL------------SMLRTHLNSEYDDVVL 46
           MP   +MS  + S K KR +  ++ +  D +L            ++      ++ D+ VL
Sbjct: 6   MPGEPSMSGNKSSGKIKRISIPRVQSSTDTELQSQSGSTPLQPTALHYAAFRTDPDESVL 65

Query: 47  PSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESI-INEKYPECNDMECV 105
           P +++ +L  LF QIE+EFE+LY ENL LQ+KID L E+L+RE     E+     D+   
Sbjct: 66  PPTLRCRLFELFQQIEKEFEVLYTENLGLQEKIDTLSERLERECYGSGERSLPLGDVADF 125

Query: 106 TNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVW 165
            +  K  +KQK +A N + +   T+NKLK QTSKIVSSFKT  ++C   R +SGHRDGVW
Sbjct: 126 PD-TKGLSKQKSMAGNSAPKTKTTSNKLKAQTSKIVSSFKTPTMTCSMQREYSGHRDGVW 184

Query: 166 DVAV-RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD 224
           +V+V R GQ ++ +ASAD + R+W+  +G+C+LQY GHSGSVNS+RF P K+L L++SGD
Sbjct: 185 EVSVGRSGQ-IIATASADHSARVWAVDSGRCLLQYIGHSGSVNSIRFHPTKELALTSSGD 243

Query: 225 KSVHIWQAVINWECLNNDN----------DSDL-------DESKEPDESSITLRTPVKEL 267
            S H+WQA ++W+     N          D +L       +E +EP     TLRTPV+EL
Sbjct: 244 NSAHVWQAAVDWDLPKRQNSSEELSGLSSDRNLSGVIVLNEEQEEPP----TLRTPVREL 299

Query: 268 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSK 327
           LGH+ VV+AADWL D EQV+TASWDR ANL+DVETG I+ +L GHD+E  +  VS+++++
Sbjct: 300 LGHTGVVMAADWLPDAEQVVTASWDRTANLYDVETGEIIHTLCGHDQE--LSHVSTHHTQ 357

Query: 328 VSCDLFQRIQHLDCGTSENPIHSVCVFQ 355
             C    +            IHSV VFQ
Sbjct: 358 RLCVTSSKDSTFRLWDFRESIHSVSVFQ 385

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328787768|ref|XP_394678.3| PREDICTED: WD repeat-containing protein 37-like [Apis mellifera]

 Score =  298 bits (762), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 168/388 (43%), Positives = 238/388 (61%), Gaps = 41/388 (10%)

Query: 1   MPQSDTMS--QKSTKHKRTASGKLSNLGDQDL------------SMLRTHLNSEYDDVVL 46
           MP   +MS  + S K KR +  ++ +  D +L            ++      ++ D+ VL
Sbjct: 6   MPGEPSMSGNKSSGKIKRISIPRVQSSTDTELQSQSGSTPLQPTALHYAAFRTDPDESVL 65

Query: 47  PSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESI-INEKYPECNDMECV 105
           P +++ +L  LF QIE+EFE+LY ENL LQ+KID L E+L+RE     E+     D+   
Sbjct: 66  PPTLRCRLFELFQQIEKEFEVLYTENLGLQEKIDTLSERLERECYGSGERSLPLGDVADF 125

Query: 106 TNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVW 165
            +  K  +KQK +A N + +   T+NKLK QTSKIVSSFKT  ++C   R +SGHRDGVW
Sbjct: 126 PD-TKGLSKQKSMAGNSAPKTKTTSNKLKAQTSKIVSSFKTPTMTCSMQREYSGHRDGVW 184

Query: 166 DVAV-RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD 224
           +V+V R GQ ++ +ASAD + R+W+  +G+C+LQY GHSGS+NS+RF P K+L L++SGD
Sbjct: 185 EVSVGRSGQ-IIATASADHSARVWAVDSGRCLLQYIGHSGSINSIRFHPTKELALTSSGD 243

Query: 225 KSVHIWQAVINWECLNNDN----------DSDL-------DESKEPDESSITLRTPVKEL 267
            S H+WQA ++W+     N          D +L       +E +EP     TLRTPV+EL
Sbjct: 244 NSAHVWQAAVDWDLPKRQNSSEELSGLSSDRNLSGVIVLNEEQEEPP----TLRTPVREL 299

Query: 268 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSK 327
           LGH+ VV+AADWL D EQV+TASWDR ANL+DVETG I+ +L GHD+E  +  VS+++++
Sbjct: 300 LGHTGVVMAADWLPDAEQVVTASWDRTANLYDVETGEIIHTLCGHDQE--LSHVSTHHTQ 357

Query: 328 VSCDLFQRIQHLDCGTSENPIHSVCVFQ 355
             C    +            IHSV VFQ
Sbjct: 358 RLCVTSSKDSTFRLWDFRESIHSVSVFQ 385

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156551275|ref|XP_001601046.1| PREDICTED: WD repeat-containing protein 37-like [Nasonia vitripennis]

 Score =  296 bits (757), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 161/347 (46%), Positives = 216/347 (62%), Gaps = 28/347 (8%)

Query: 28  QDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLD 87
           Q  ++      S+ +D  +P  ++ KL  LF QIE+EFE+L  EN  LQ+KI+ L E+L+
Sbjct: 44  QPTALHYVSFRSDIEDSPIPPVLRSKLLDLFQQIEKEFEMLCTENTGLQEKIEALNERLE 103

Query: 88  RESI-INEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKT 146
           RE     E+     D +  T+ +KN +KQK L  + SA K+KT++KLK QTSKIVSSFK 
Sbjct: 104 RECYGSGERSLPPGDFQDFTD-SKNLSKQKSLGGS-SAHKVKTSHKLKAQTSKIVSSFKN 161

Query: 147 SLLSCYKIRSFSGHRDGVWDVAV-RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS 205
             ++C   R + GHRDGVW+V+V R  QP++ +ASAD T R+W+  + +C+LQY+GHSGS
Sbjct: 162 PTMTCSMQREYRGHRDGVWEVSVGRSSQPIIATASADHTARVWAMDSCRCLLQYTGHSGS 221

Query: 206 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC-----------------LNNDNDSDLD 248
           VNSVRF P +DL LSASGD S H+WQA +NW+                  +  DN   L+
Sbjct: 222 VNSVRFHPTRDLALSASGDCSAHVWQAAVNWDLPKRPSLEDLGTAGSDRGIGGDNCPPLE 281

Query: 249 ESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS 308
           E   P     TLRTPVKELLGH+ VV AADWL   EQ++TASWDR ANL+D E+G I+ +
Sbjct: 282 EDSAP-----TLRTPVKELLGHTGVVTAADWLFGAEQIVTASWDRTANLYDAESGEIIHT 336

Query: 309 LTGHDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQ 355
           L GHD+E  +  VS ++++  C    R           PIHSV VFQ
Sbjct: 337 LCGHDQE--LTHVSVHHAQRLCVTSSRDSTFRLWDFREPIHSVSVFQ 381

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	361
FB|FBgn0038617	487	CG12333 [Drosophila melanogast	0.556	0.412	0.495	2.9e-56
MGI|MGI:1920393	496	Wdr37 "WD repeat domain 37" [M	0.927	0.675	0.405	7e-54
ZFIN|ZDB-GENE-030131-8101	494	wdr37 "WD repeat domain 37" [D	0.919	0.672	0.383	2.2e-50
UNIPROTKB|B5DG67	423	wdr12 "Ribosome biogenesis pro	0.454	0.387	0.348	9.8e-17
UNIPROTKB|I3L3N5	208	PAFAH1B1 "Platelet-activating	0.434	0.754	0.296	2.8e-15
UNIPROTKB|B4DF38	205	PAFAH1B1 "Platelet-activating	0.434	0.765	0.296	2.8e-15
UNIPROTKB|Q5BJ90	423	wdr12 "Ribosome biogenesis pro	0.470	0.401	0.333	5.4e-15
UNIPROTKB|Q5REE6	423	WDR12 "Ribosome biogenesis pro	0.711	0.607	0.292	1.7e-14
ZFIN|ZDB-GENE-030131-371	422	wdr12 "WD repeat domain 12" [D	0.432	0.369	0.333	2.2e-14
UNIPROTKB|Q9GZL7	423	WDR12 "Ribosome biogenesis pro	0.711	0.607	0.289	2.2e-14

FB|FBgn0038617 CG12333 [Drosophila melanogaster (taxid:7227)]

 Score = 529 (191.3 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
 Identities = 104/210 (49%), Positives = 137/210 (65%)

Query:   118 LASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLG 177
             L+S     K K +NK+K QTS+IVSSFK   +    +R F GH+DG+W VA + GQP++G
Sbjct:   117 LSSATGGSKAKASNKIKAQTSRIVSSFKAPTVVSTVVREFGGHKDGIWQVAAKAGQPIIG 176

Query:   178 SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE 237
             +ASAD T  +W  ++ +C+LQY GH+GSVNS++F   +DLVL+ SGD + HIWQA +NWE
Sbjct:   177 TASADHTACIWGVESARCLLQYQGHAGSVNSIKFHQQRDLVLTGSGDGTAHIWQAAVNWE 236

Query:   238 C--XXXXXXXXXXESKEP--DESSI-TLRTPVKELLG---HSNVVIAADWLSDGEQVITA 289
                          +S E   D   + TLRTP+ E  G   H +VV+AADWLS  +Q+IT 
Sbjct:   237 VPKKGHSSEEELDDSDEQVEDRDRVDTLRTPLCEFTGPGGHLSVVVAADWLSSMDQIITG 296

Query:   290 SWDRVANLFDVETGTILQSLTGHDEE-PHI 318
             SWDR A L+DVETG  LQ LTGHD E  H+
Sbjct:   297 SWDRTAILWDVETGLPLQPLTGHDHELTHV 326

GO:0046331 "lateral inhibition" evidence=IMP

MGI|MGI:1920393 Wdr37 "WD repeat domain 37" [Mus musculus (taxid:10090)]

 Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
 Identities = 151/372 (40%), Positives = 197/372 (52%)

Query:     6 TMSQKSTKHK-RTASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIERE 64
             T  Q   K K  + S + +N  +Q+ + L   +  E  D  LPSSV+  L  LF QIERE
Sbjct:    10 TARQAKQKRKSHSLSIRRTNSSEQERTGLPREM-LEGQDSKLPSSVRSTLLELFGQIERE 68

Query:    65 FXXXXXXXXXXQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPS- 123
             F          + +ID L E+L  E        +  D      ++K   K K   S    
Sbjct:    69 FENLYIENLELRREIDTLNERLAGEG-------QAIDG---AELSKGQLKTKASHSTSQL 118

Query:   124 AQKLKTTNKLKVQTSKIVSSFKT--SLLSCYKIRSFSGHRDGVWDVAVRPGQP-VLGSAS 180
             +QKLKTT   K  TSKIVSSFKT  S   C  ++ + GHRDG+WDV+V   QP VLG+AS
Sbjct:   119 SQKLKTT--YKASTSKIVSSFKTTTSRAICQLVKEYIGHRDGIWDVSVTRTQPIVLGTAS 176

Query:   181 ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW---- 236
             AD T  LWS +TGKC+++Y+GH GSVNS++F P++ L L+ASGD++ HIW+ V+      
Sbjct:   177 ADHTALLWSIETGKCLVKYAGHVGSVNSIKFHPSEQLALTASGDQTAHIWRYVVQLPTPQ 236

Query:   237 ---ECXXXXXXXXXXESKEPDESSI---------TLRTPVKELLGHSNVVIAADWLSDGE 284
                +           E  + DE  I         T+R P+  L  H  VVIAADWL  G+
Sbjct:   237 PVADTSQQISGEDEIECSDKDEPDIDGDVSSDCPTVRVPLTSLKSHQGVVIAADWLVGGK 296

Query:   285 QVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTS 344
             QV+TASWDR ANL+DVET  ++ SLTGHD+E    C       V      R         
Sbjct:   297 QVVTASWDRTANLYDVETSELVHSLTGHDQELTHCCTHPTQRLVVTS--SRDTTFRLWDF 354

Query:   345 ENP-IHSVCVFQ 355
              +P IHSV VFQ
Sbjct:   355 RDPSIHSVNVFQ 366

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-030131-8101 wdr37 "WD repeat domain 37" [Danio rerio (taxid:7955)]

 Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
 Identities = 141/368 (38%), Positives = 194/368 (52%)

Query:     7 MSQKSTKHKRTASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFX 66
             + QK   H  + S + +N  +QD + ++  +  E  D  LP +++  L  LF QIEREF 
Sbjct:    14 VKQKRKSH--SLSIRRTNSTEQDRTGMQRDM-LEGQDSKLPMALRSNLLDLFGQIEREFE 70

Query:    67 XXXXXXXXXQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPS-AQ 125
                      + +I+ L E+L  E     +  E  D+      +K   K K   S    +Q
Sbjct:    71 NLYIENLELRREIESLNERLSGEG----QTVEGGDL------SKGALKTKASHSTSQLSQ 120

Query:   126 KLKTTNKLKVQTSKIVSSFK--TSLLSCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASAD 182
             KLKTT   K  TSKIVSSFK  TS   C  ++ + GHRDG+WD+AV   QP VLG+ASAD
Sbjct:   121 KLKTT--YKASTSKIVSSFKATTSRAVCQLVKEYVGHRDGIWDLAVTRVQPLVLGTASAD 178

Query:   183 RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE----- 237
                 LWS +TGKC+L+Y+GH+GSVNS++F P + + L+ASGD++ HIW+ ++        
Sbjct:   179 HCSMLWSIETGKCLLKYAGHAGSVNSIKFHPTEQMALTASGDQTAHIWRYMVQLPLPQPP 238

Query:   238 CXXXXXXXXXXESKEPDESS---------ITLRTPVKELLGHSNVVIAADWLSDGEQVIT 288
                        +  + DE+           T+R     L  H  VVIAADWL  G+QV+T
Sbjct:   239 ADISASLDDDVDFSDKDEADGDADGPNECPTIRVATTTLKSHQGVVIAADWLVGGKQVVT 298

Query:   289 ASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENP- 347
             ASWDR ANL+DVET  ++ +LTGHD+E    C       V      R          +P 
Sbjct:   299 ASWDRAANLYDVETSELVHTLTGHDQELTHCCTHPTQRLVVTS--SRDTTFRLWDFRDPS 356

Query:   348 IHSVCVFQ 355
             IHSV VFQ
Sbjct:   357 IHSVNVFQ 364

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|B5DG67 wdr12 "Ribosome biogenesis protein wdr12" [Salmo salar (taxid:8030)]

 Score = 226 (84.6 bits), Expect = 9.8e-17, P = 9.8e-17
 Identities = 60/172 (34%), Positives = 88/172 (51%)

Query:   154 IRSFSGHRDGVWDVA--VRPG-QPVLGSASADRTVRLW--STQTGKCVLQYS--GHSGSV 206
             + + +GH D V DVA   R G   +L +AS D+T+ LW  +++  K   ++   GH+GSV
Sbjct:   133 VMTVAGHTDVVKDVAWVKRDGLTSLLLTASLDQTILLWEWNSERNKLKARHCCRGHAGSV 192

Query:   207 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKE 266
             +++   P +    S S DK + IW AV   E             K+  E     RTP+  
Sbjct:   193 DTIATDPTRTKFCSGSWDKMLKIWSAVATEEEEEEEEPPSRPRKKQKTEQLGLTRTPLMT 252

Query:   267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI 318
             L GH+  V +  WL D E++ +ASWD    L+D ETG++  SLTG     HI
Sbjct:   253 LSGHNEAVSSVLWL-DSEEICSASWDHTIRLWDAETGSVKTSLTGSKVFNHI 303

GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0005654 "nucleoplasm" evidence=ISS

GO:0005730 "nucleolus" evidence=ISS

GO:0008283 "cell proliferation" evidence=ISS

GO:0030687 "preribosome, large subunit precursor" evidence=ISS

GO:0070545 "PeBoW complex" evidence=ISS

UNIPROTKB|I3L3N5 PAFAH1B1 "Platelet-activating factor acetylhydrolase IB subunit alpha" [Homo sapiens (taxid:9606)]

 Score = 196 (74.1 bits), Expect = 2.8e-15, P = 2.8e-15
 Identities = 49/165 (29%), Positives = 81/165 (49%)

Query:   154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
             IR+  GH   V  VA+ P    + SAS D+T+++W  QTG CV  ++GH   V  VR  P
Sbjct:    17 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 74

Query:   214 NKD--LVLSASGDKSVHIWQAVINWECXXXXXXXXXXE---SKEPDESSITLRTPVKELL 268
             N+D  L+ S S D++V +W  V   EC              S  P+ S  ++       +
Sbjct:    75 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYSSISEATGSEV 133

Query:   269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
             GH N V    + S G+ +++ + D+   ++D +    +++L  H+
Sbjct:   134 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE 178

GO:0005737 "cytoplasm" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0051301 "cell division" evidence=IEA

UNIPROTKB|B4DF38 PAFAH1B1 "Platelet-activating factor acetylhydrolase IB subunit alpha" [Homo sapiens (taxid:9606)]

 Score = 196 (74.1 bits), Expect = 2.8e-15, P = 2.8e-15
 Identities = 49/165 (29%), Positives = 81/165 (49%)

Query:   154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
             IR+  GH   V  VA+ P    + SAS D+T+++W  QTG CV  ++GH   V  VR  P
Sbjct:    14 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 71

Query:   214 NKD--LVLSASGDKSVHIWQAVINWECXXXXXXXXXXE---SKEPDESSITLRTPVKELL 268
             N+D  L+ S S D++V +W  V   EC              S  P+ S  ++       +
Sbjct:    72 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYSSISEATGSEV 130

Query:   269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
             GH N V    + S G+ +++ + D+   ++D +    +++L  H+
Sbjct:   131 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE 175

GO:0005737 "cytoplasm" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0051301 "cell division" evidence=IEA

UNIPROTKB|Q5BJ90 wdr12 "Ribosome biogenesis protein wdr12" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 212 (79.7 bits), Expect = 5.4e-15, P = 5.4e-15
 Identities = 61/183 (33%), Positives = 93/183 (50%)

Query:   154 IRSFSGHRDGVWDVA-VRPGQP--VLGSASADRTVRLW--STQTGKCVLQYS--GHSGSV 206
             I + +GH + V DV  V+      +L SAS D+T++LW  +T+  K    +   GH+GSV
Sbjct:   133 IMTITGHTEAVKDVTWVKKDSLSCLLLSASIDQTIQLWEWNTERNKIKALHCCRGHAGSV 192

Query:   207 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKE 266
             +S+    ++    S S DK + IW AV + E             K+  E     R P+  
Sbjct:   193 DSIAVDASRTKFCSGSWDKMLKIWSAVPSEEEDEYEETSDRPRKKQKTEKMGLTRIPIVT 252

Query:   267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
             L GHS  V +  W SD +++ +ASWD    ++DVETGT+  +L G+       C+S  YS
Sbjct:   253 LSGHSEAVSSVLW-SDVDEICSASWDHNIKIWDVETGTVKSTLAGNKV---FNCIS--YS 306

Query:   327 KVS 329
              +S
Sbjct:   307 PLS 309

GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0005654 "nucleoplasm" evidence=ISS

GO:0005730 "nucleolus" evidence=ISS

GO:0008283 "cell proliferation" evidence=ISS

GO:0030687 "preribosome, large subunit precursor" evidence=ISS

GO:0070545 "PeBoW complex" evidence=ISS

UNIPROTKB|Q5REE6 WDR12 "Ribosome biogenesis protein WDR12" [Pongo abelii (taxid:9601)]

 Score = 208 (78.3 bits), Expect = 1.7e-14, P = 1.7e-14
 Identities = 84/287 (29%), Positives = 127/287 (44%)

Query:    39 SEYDDV--VLPSSVKFKLNSLFSQIEREFXXXXXXXXXXQDKIDMLMEKLDRESIIN--- 93
             SE  D+  ++   +K K N     +E +F           DK  M ME +  E ++    
Sbjct:    28 SEIADLSNIINKLLKDK-NEFHKHVEFDFLIKGQFLRMPLDK-HMEMENISSEEVVEIEY 85

Query:    94 -EKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCY 152
              EKY      +C+      F+   + +S   A++   T     +TS+I S      L   
Sbjct:    86 VEKYTAPQPEQCM------FHDDWI-SSIKGAEEWILTGSYD-KTSRIWS------LEGK 131

Query:   153 KIRSFSGHRDGVWDVA-VRPGQP--VLGSASADRTVRLW--STQTGKCVLQYS--GHSGS 205
              I +  GH D V DVA V+      +L SAS D+T+ LW  + +  K    +   GH+GS
Sbjct:   132 SIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGS 191

Query:   206 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVK 265
             V+S+    +     S S DK + IW  V   E             K+  E     RTPV 
Sbjct:   192 VDSIAVDGSGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPVV 251

Query:   266 ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
              L GH   V +  W SD E++ +ASWD    ++DVE+G++  +LTG+
Sbjct:   252 TLSGHMEAVSSVLW-SDAEEICSASWDHTIRVWDVESGSLKSTLTGN 297

GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0005654 "nucleoplasm" evidence=ISS

GO:0005730 "nucleolus" evidence=ISS

GO:0008283 "cell proliferation" evidence=ISS

GO:0030687 "preribosome, large subunit precursor" evidence=ISS

GO:0070545 "PeBoW complex" evidence=ISS

ZFIN|ZDB-GENE-030131-371 wdr12 "WD repeat domain 12" [Danio rerio (taxid:7955)]

 Score = 207 (77.9 bits), Expect = 2.2e-14, P = 2.2e-14
 Identities = 55/165 (33%), Positives = 88/165 (53%)

Query:   154 IRSFSGHRDGVWDVA--VRPG-QPVLGSASADRTVRLW--STQTGKCVLQYS--GHSGSV 206
             + + +GH D V DVA   R G   VL +AS D+TV LW  +++  K   ++   GH+GSV
Sbjct:   133 VMTVAGHADVVKDVAWVKRDGLNSVLLTASLDQTVMLWEWNSERNKVKARHCCRGHAGSV 192

Query:   207 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKE 266
             +++   P +    S S DK + IW AV   E           + ++ ++  +T RTP+  
Sbjct:   193 DTIAVDPTRTKFCSGSWDKMLKIWSAVPTEEEDEIEEPNRPRKKQKTEQMGLT-RTPLMT 251

Query:   267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG 311
             L GH+  V +  W+ D +++ +ASWD    L+D ETG    +L+G
Sbjct:   252 LSGHNEAVSSVLWM-DADELCSASWDHTIRLWDAETGGQKSTLSG 295

GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0005654 "nucleoplasm" evidence=ISS

GO:0005730 "nucleolus" evidence=ISS

GO:0008283 "cell proliferation" evidence=ISS

GO:0030687 "preribosome, large subunit precursor" evidence=ISS

GO:0070545 "PeBoW complex" evidence=ISS

GO:0006364 "rRNA processing" evidence=IEA

GO:0042254 "ribosome biogenesis" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q9GZL7 WDR12 "Ribosome biogenesis protein WDR12" [Homo sapiens (taxid:9606)]

 Score = 207 (77.9 bits), Expect = 2.2e-14, P = 2.2e-14
 Identities = 83/287 (28%), Positives = 127/287 (44%)

Query:    39 SEYDDV--VLPSSVKFKLNSLFSQIEREFXXXXXXXXXXQDKIDMLMEKLDRESIIN--- 93
             SE  D+  ++   +K K N     +E +F           DK  M ME +  E ++    
Sbjct:    28 SEIADLSNIINKLLKDK-NEFHKHVEFDFLIKGQFLRMPLDK-HMEMENISSEEVVEIEY 85

Query:    94 -EKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCY 152
              EKY      +C+      F+   + +S   A++   T     +TS+I S      L   
Sbjct:    86 VEKYTAPQPEQCM------FHDDWI-SSIKGAEEWILTGSYD-KTSRIWS------LEGK 131

Query:   153 KIRSFSGHRDGVWDVA-VRPGQP--VLGSASADRTVRLW--STQTGKCVLQYS--GHSGS 205
              I +  GH D V DVA V+      +L SAS D+T+ LW  + +  K    +   GH+GS
Sbjct:   132 SIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGS 191

Query:   206 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVK 265
             V+S+    +     S S DK + IW  V   E             K+  E     RTP+ 
Sbjct:   192 VDSIAVDGSGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIV 251

Query:   266 ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
              L GH   V +  W SD E++ +ASWD    ++DVE+G++  +LTG+
Sbjct:   252 TLSGHMEAVSSVLW-SDAEEICSASWDHTIRVWDVESGSLKSTLTGN 297

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0005730 "nucleolus" evidence=IDA

GO:0005654 "nucleoplasm" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP

GO:0042273 "ribosomal large subunit biogenesis" evidence=IC

GO:0008283 "cell proliferation" evidence=IMP

GO:0070545 "PeBoW complex" evidence=IDA

GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP

GO:0030687 "preribosome, large subunit precursor" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A4IIX9	WDR37_XENTR	No assigned EC number	0.4171	0.9113	0.6659	yes	N/A
Q8CBE3	WDR37_MOUSE	No assigned EC number	0.4340	0.8254	0.6008	yes	N/A
Q9Y2I8	WDR37_HUMAN	No assigned EC number	0.4090	0.9113	0.6659	yes	N/A
Q5R650	WDR37_PONAB	No assigned EC number	0.416	0.9113	0.6646	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	361
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	4e-30
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-26
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	4e-26
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	4e-25
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	4e-14
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	1e-12
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	4e-09
smart00320	40	smart00320, WD40, WD40 repeats	2e-08
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	5e-08
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	5e-06
smart00320	40	smart00320, WD40, WD40 repeats	8e-06
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	1e-05
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	3e-04
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	0.001
smart00320	40	smart00320, WD40, WD40 repeats	0.002

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  116 bits (292), Expect = 4e-30
 Identities = 57/188 (30%), Positives = 89/188 (47%), Gaps = 30/188 (15%)

Query: 140 IVSSFKTSLL----SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC 195
             SS KT  L    +   +R+ +GH   V  VA  P   +L S+S D+T+++W  +TGKC
Sbjct: 68  SGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKC 127

Query: 196 VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDE 255
           +    GH+  VNSV F P+   V S+S D ++ +W               DL   K    
Sbjct: 128 LTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLW---------------DLRTGK---- 168

Query: 256 SSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
                   V  L GH+  V +  +  DGE+++++S D    L+D+ TG  L +L GH+  
Sbjct: 169 -------CVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENG 221

Query: 316 PHILCVSS 323
            + +  S 
Sbjct: 222 VNSVAFSP 229

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  107 bits (268), Expect = 1e-26
 Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 28/176 (15%)

Query: 147 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV 206
            L +   +R+  GH   V DVA       L S S+D+T+RLW  +TG+CV   +GH+  V
Sbjct: 37  DLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYV 96

Query: 207 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKE 266
           +SV F P+  ++ S+S DK++ +W                           +     +  
Sbjct: 97  SSVAFSPDGRILSSSSRDKTIKVW--------------------------DVETGKCLTT 130

Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
           L GH++ V +  +  DG  V ++S D    L+D+ TG  + +LTGH  E  +  V+
Sbjct: 131 LRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGE--VNSVA 184

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  105 bits (264), Expect = 4e-26
 Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 26/159 (16%)

Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
            R+  GH  GV  VA  P   +L + S D T+++W  +TG+ +    GH+G V  V    
Sbjct: 2   RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASA 61

Query: 214 NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNV 273
           +   + S S DK++ +W                           +     V+ L GH++ 
Sbjct: 62  DGTYLASGSSDKTIRLW--------------------------DLETGECVRTLTGHTSY 95

Query: 274 VIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
           V +  +  DG  + ++S D+   ++DVETG  L +L GH
Sbjct: 96  VSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGH 134

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  102 bits (256), Expect = 4e-25
 Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 26/150 (17%)

Query: 150 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 209
           +   + + +GH   V  VA  P    L S+S+D T++LW   TGKC+    GH   VNSV
Sbjct: 166 TGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSV 225

Query: 210 RFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG 269
            F P+  L+ S S D ++ +W                           +     V+ L G
Sbjct: 226 AFSPDGYLLASGSEDGTIRVW--------------------------DLRTGECVQTLSG 259

Query: 270 HSNVVIAADWLSDGEQVITASWDRVANLFD 299
           H+N V +  W  DG+++ + S D    ++D
Sbjct: 260 HTNSVTSLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 71.6 bits (176), Expect = 4e-14
 Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 28/128 (21%)

Query: 195 CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPD 254
                 GH+G V  V F P+  L+ + SGD ++ +W                     E  
Sbjct: 1   LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVW-------------------DLETG 41

Query: 255 ESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
           E   TL+       GH+  V      +DG  + + S D+   L+D+ETG  +++LTGH  
Sbjct: 42  ELLRTLK-------GHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTS 94

Query: 315 EPHILCVS 322
              +  V+
Sbjct: 95  Y--VSSVA 100

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 68.6 bits (166), Expect = 1e-12
 Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 19/189 (10%)

Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSAS-ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 211
            IR+  GH + V  +A  P   +L S S  D T++LW  +TGK +   +GH+  V+S+ F
Sbjct: 147 LIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAF 206

Query: 212 LPNKD-LVLSASGDKSVHIW------------QAVINWECLNNDNDSDLDESKEPDESSI 258
            P+   L+ S S D ++ +W                +    +   D  L  S   D +  
Sbjct: 207 SPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGTIR 266

Query: 259 -----TLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
                +  + ++ L GHS+ V++  +  DG+ + + S D    L+D+ETG +L SLT   
Sbjct: 267 LWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKG 326

Query: 314 EEPHILCVS 322
            E  +  +S
Sbjct: 327 HEGPVSSLS 335

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 57.8 bits (138), Expect = 4e-09
 Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 18/167 (10%)

Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRF 211
           +R+ SGH   V  VA  P   +L S S+D TVRLW  +TGK +   +  GH G V+S+ F
Sbjct: 277 LRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSF 336

Query: 212 LPN-KDLVLSASGDKSVHIWQ-----AVINWECLNNDNDSDLDESKE-----PDESSITL 260
            P+   LV   S D ++ +W       +   E  +N                  + ++ L
Sbjct: 337 SPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRL 396

Query: 261 R-----TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET 302
                 + ++ L GH++ V + D+  DG+ + + S D    L+D++T
Sbjct: 397 WDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKT 443

Length = 466

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 49.2 bits (118), Expect = 2e-08
 Identities = 13/39 (33%), Positives = 22/39 (56%)

Query: 192 TGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
           +G+ +    GH+G V SV F P+   + S S D ++ +W
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLW 39

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 48.1 bits (115), Expect = 5e-08
 Identities = 16/38 (42%), Positives = 23/38 (60%)

Query: 193 GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
           GK +    GH+G V SV F P+ +L+ S S D +V +W
Sbjct: 1   GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVW 38

Length = 39

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 42.7 bits (101), Expect = 5e-06
 Identities = 15/37 (40%), Positives = 19/37 (51%)

Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWS 189
            +R+  GH   V  VA  P   +L S S D TVR+W 
Sbjct: 3   LLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 41.9 bits (99), Expect = 8e-06
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWS 189
           +++  GH   V  VA  P    L S S D T++LW 
Sbjct: 5   LKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 1/111 (0%)

Query: 147 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV 206
            L +   +++  GH   V  V+  P   V+ S S D TVRLW   TG  +    GH+  V
Sbjct: 357 DLRTGKPLKTLEGH-SNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRV 415

Query: 207 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESS 257
            S+ F P+   + S S D ++ +W    + + ++   D  +  SK  D S 
Sbjct: 416 TSLDFSPDGKSLASGSSDNTIRLWDLKTSLKSVSFSPDGKVLASKSSDLSV 466

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 41.6 bits (98), Expect = 3e-04
 Identities = 15/43 (34%), Positives = 23/43 (53%)

Query: 147 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWS 189
            L +   +++ SGH + V  +A  P    L S SAD T+R+W 
Sbjct: 247 DLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 35.8 bits (83), Expect = 0.001
 Identities = 9/39 (23%), Positives = 18/39 (46%)

Query: 261 RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
              ++ L GH+  V +  +  DG  + + S D    ++D
Sbjct: 1   GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 35.0 bits (81), Expect = 0.002
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 261 RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
              +K L GH+  V +  +  DG+ + + S D    L+D
Sbjct: 2   GELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	361
KOG0300|consensus	481		100.0
KOG0271|consensus	480		100.0
KOG0272|consensus	459		100.0
KOG0271|consensus	480		99.97
KOG0263|consensus	707		99.97
KOG0286|consensus	343		99.97
KOG0285|consensus	460		99.97
KOG0263|consensus	707		99.97
KOG0279|consensus	315		99.96
KOG0272|consensus	459		99.96
KOG0295|consensus	406		99.96
KOG0275|consensus	508		99.96
KOG0286|consensus	343		99.96
KOG0281|consensus	499		99.96
KOG0645|consensus	312		99.96
KOG0315|consensus	311		99.95
KOG0266|consensus	456		99.95
KOG0266|consensus	456		99.95
KOG0279|consensus	315		99.95
KOG0273|consensus	524		99.94
PTZ00421	493	coronin; Provisional	99.94
KOG0276|consensus	794		99.94
KOG0285|consensus	460		99.94
KOG0273|consensus	524		99.94
KOG0295|consensus	406		99.94
KOG0284|consensus	464		99.94
KOG0640|consensus	430		99.94
PTZ00420	568	coronin; Provisional	99.94
KOG0645|consensus	312		99.93
KOG0265|consensus	338		99.93
KOG0319|consensus	775		99.93
KOG0284|consensus	464		99.93
KOG0277|consensus	311		99.93
KOG0281|consensus	499		99.92
KOG0265|consensus	338		99.92
KOG0274|consensus	537		99.92
KOG0282|consensus	503		99.92
KOG0316|consensus	307		99.92
KOG0276|consensus	794		99.92
KOG0292|consensus	1202		99.92
KOG0319|consensus	775		99.92
KOG0291|consensus	893		99.92
KOG0316|consensus	307		99.92
KOG0296|consensus	399		99.92
KOG0274|consensus	537		99.91
KOG0282|consensus	503		99.91
KOG0293|consensus	519		99.91
KOG0269|consensus	839		99.91
KOG0308|consensus	735		99.91
KOG0292|consensus	1202		99.9
KOG0277|consensus	311		99.9
KOG0313|consensus	423		99.9
KOG0318|consensus	603		99.9
PTZ00421	493	coronin; Provisional	99.89
KOG0313|consensus	423		99.89
KOG0643|consensus	327		99.89
KOG0300|consensus	481		99.89
KOG0315|consensus	311		99.89
KOG0289|consensus	506		99.89
KOG0283|consensus	712		99.89
KOG0296|consensus	399		99.89
KOG1332|consensus	299		99.89
KOG0267|consensus	825		99.88
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.88
KOG0291|consensus	893		99.88
KOG0264|consensus	422		99.88
PLN00181	793	protein SPA1-RELATED; Provisional	99.87
PTZ00420	568	coronin; Provisional	99.87
KOG0318|consensus	603		99.87
KOG0294|consensus	362		99.87
KOG0264|consensus	422		99.87
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.87
KOG0275|consensus	508		99.87
PLN00181	793	protein SPA1-RELATED; Provisional	99.86
KOG0283|consensus	712		99.86
KOG0306|consensus	888		99.86
KOG0310|consensus	487		99.86
KOG1407|consensus	313		99.86
KOG0640|consensus	430		99.86
KOG0650|consensus	733		99.86
KOG0643|consensus	327		99.86
KOG0308|consensus	735		99.85
KOG1446|consensus	311		99.85
KOG0772|consensus	641		99.85
KOG0310|consensus	487		99.84
KOG0302|consensus	440		99.84
KOG0305|consensus	484		99.84
KOG0293|consensus	519		99.83
KOG0641|consensus	350		99.83
KOG0294|consensus	362		99.83
KOG0278|consensus	334		99.83
KOG0299|consensus	479		99.83
KOG0302|consensus	440		99.83
KOG0289|consensus	506		99.83
KOG4283|consensus	397		99.83
KOG0646|consensus	476		99.82
KOG0301|consensus	745		99.82
KOG0270|consensus	463		99.82
KOG0288|consensus	459		99.82
KOG0303|consensus	472		99.82
KOG1407|consensus	313		99.82
KOG0973|consensus	942		99.82
KOG0973|consensus	942		99.82
KOG0306|consensus	888		99.81
KOG1332|consensus	299		99.81
KOG0647|consensus	347		99.81
KOG0301|consensus	745		99.81
KOG2096|consensus	420		99.81
KOG0278|consensus	334		99.8
KOG0305|consensus	484		99.8
KOG0299|consensus	479		99.79
KOG0639|consensus	705		99.79
KOG0772|consensus	641		99.78
KOG0288|consensus	459		99.77
KOG0269|consensus	839		99.77
KOG0647|consensus	347		99.77
KOG0268|consensus	433		99.76
KOG0267|consensus	825		99.75
KOG1273|consensus	405		99.75
KOG0642|consensus	577		99.75
KOG2445|consensus	361		99.75
KOG1446|consensus	311		99.75
KOG4283|consensus	397		99.74
KOG0268|consensus	433		99.74
KOG0641|consensus	350		99.73
KOG0646|consensus	476		99.73
KOG1034|consensus	385		99.72
KOG2445|consensus	361		99.72
KOG1063|consensus	764		99.72
KOG2048|consensus	691		99.71
KOG0639|consensus	705		99.7
KOG0321|consensus	720		99.69
KOG1036|consensus	323		99.69
KOG4378|consensus	673		99.68
KOG1539|consensus	910		99.67
KOG1009|consensus	434		99.67
KOG0270|consensus	463		99.66
KOG1036|consensus	323		99.66
KOG1408|consensus	1080		99.66
KOG1445|consensus	1012		99.66
KOG0649|consensus	325		99.66
KOG1274|consensus	933		99.65
KOG0303|consensus	472		99.65
KOG0642|consensus	577		99.65
KOG1007|consensus	370		99.65
KOG1034|consensus	385		99.65
KOG1408|consensus	1080		99.65
KOG4328|consensus	498		99.64
KOG4328|consensus	498		99.62
KOG2919|consensus	406		99.61
KOG1273|consensus	405		99.61
KOG1310|consensus	758		99.59
KOG0771|consensus	398		99.59
KOG0307|consensus	1049		99.59
KOG1007|consensus	370		99.59
KOG1274|consensus	933		99.59
KOG2048|consensus	691		99.58
KOG0644|consensus	1113		99.58
KOG2394|consensus	636		99.58
KOG1445|consensus	1012		99.57
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.56
KOG1523|consensus	361		99.56
KOG0321|consensus	720		99.56
KOG2055|consensus	514		99.55
KOG0290|consensus	364		99.55
KOG0649|consensus	325		99.54
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.54
KOG2096|consensus	420		99.51
KOG4227|consensus	609		99.51
KOG1063|consensus	764		99.5
KOG4378|consensus	673		99.5
KOG1188|consensus	376		99.5
KOG2919|consensus	406		99.49
COG2319	466	FOG: WD40 repeat [General function prediction only	99.49
KOG2106|consensus	626		99.48
KOG0307|consensus	1049		99.48
KOG2394|consensus	636		99.47
KOG1009|consensus	434		99.47
KOG2110|consensus	391		99.47
KOG0290|consensus	364		99.47
KOG1188|consensus	376		99.47
KOG1539|consensus	910		99.46
KOG1240|consensus	1431		99.45
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.45
COG2319	466	FOG: WD40 repeat [General function prediction only	99.43
KOG2106|consensus	626		99.41
KOG1272|consensus	545		99.41
KOG1523|consensus	361		99.4
KOG0322|consensus	323		99.39
KOG0644|consensus	1113		99.36
KOG2055|consensus	514		99.36
KOG1524|consensus	737		99.36
KOG1587|consensus	555		99.36
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.36
KOG0650|consensus	733		99.36
KOG1538|consensus	1081		99.34
KOG2110|consensus	391		99.33
KOG3881|consensus	412		99.32
KOG2111|consensus	346		99.31
KOG1538|consensus	1081		99.29
KOG0322|consensus	323		99.27
KOG0974|consensus	967		99.26
KOG0974|consensus	967		99.26
KOG1310|consensus	758		99.25
PRK01742	429	tolB translocation protein TolB; Provisional	99.23
KOG1409|consensus	404		99.23
PRK01742	429	tolB translocation protein TolB; Provisional	99.21
KOG1517|consensus	1387		99.19
KOG1064|consensus	2439		99.18
KOG1517|consensus	1387		99.17
KOG1963|consensus	792		99.15
KOG2139|consensus	445		99.12
KOG1587|consensus	555		99.12
KOG0280|consensus	339		99.11
PRK05137	435	tolB translocation protein TolB; Provisional	99.11
KOG4227|consensus	609		99.08
PRK04922	433	tolB translocation protein TolB; Provisional	99.07
KOG2321|consensus	703		99.06
KOG2139|consensus	445		99.06
KOG4547|consensus	541		99.06
KOG0771|consensus	398		99.06
PRK03629	429	tolB translocation protein TolB; Provisional	99.05
KOG3881|consensus	412		99.05
PRK03629	429	tolB translocation protein TolB; Provisional	99.05
PRK02889	427	tolB translocation protein TolB; Provisional	99.05
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	99.04
KOG2321|consensus	703		99.04
KOG2111|consensus	346		99.04
KOG4547|consensus	541		99.04
KOG1524|consensus	737		99.03
KOG3914|consensus	390		99.03
KOG1272|consensus	545		99.0
PRK11028	330	6-phosphogluconolactonase; Provisional	99.0
KOG0309|consensus	1081		98.99
KOG1963|consensus	792		98.99
PRK11028	330	6-phosphogluconolactonase; Provisional	98.98
KOG4190|consensus	1034		98.98
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	98.97
PRK00178	430	tolB translocation protein TolB; Provisional	98.95
KOG1334|consensus	559		98.95
KOG0280|consensus	339		98.88
KOG2695|consensus	425		98.88
PRK04792	448	tolB translocation protein TolB; Provisional	98.88
PRK04922	433	tolB translocation protein TolB; Provisional	98.88
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.87
KOG1240|consensus	1431		98.85
KOG3914|consensus	390		98.84
KOG1064|consensus	2439		98.84
PRK02889	427	tolB translocation protein TolB; Provisional	98.81
KOG1409|consensus	404		98.8
KOG2695|consensus	425		98.79
KOG1334|consensus	559		98.77
PRK05137	435	tolB translocation protein TolB; Provisional	98.75
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	98.71
KOG1354|consensus	433		98.71
KOG2315|consensus	566		98.68
PRK01029	428	tolB translocation protein TolB; Provisional	98.67
KOG1354|consensus	433		98.66
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	98.66
KOG2066|consensus	846		98.64
KOG0309|consensus	1081		98.62
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	98.59
KOG4497|consensus	447		98.58
PRK00178	430	tolB translocation protein TolB; Provisional	98.57
KOG2315|consensus	566		98.54
KOG4714|consensus	319		98.54
KOG4714|consensus	319		98.52
PRK04792	448	tolB translocation protein TolB; Provisional	98.52
KOG4532|consensus	344		98.51
KOG1832|consensus	1516		98.5
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.49
PRK01029	428	tolB translocation protein TolB; Provisional	98.48
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.44
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.44
KOG4532|consensus	344		98.39
KOG1912|consensus	1062		98.39
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.27
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.26
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	98.26
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.25
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	98.19
KOG1912|consensus	1062		98.19
KOG1645|consensus	463		98.19
PRK04043	419	tolB translocation protein TolB; Provisional	98.19
KOG4497|consensus	447		98.19
COG4946	668	Uncharacterized protein related to the periplasmic	98.19
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	98.17
KOG2041|consensus	1189		98.14
KOG1275|consensus	1118		98.13
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.07
KOG4190|consensus	1034		98.06
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	98.06
KOG2066|consensus	846		98.02
COG4946	668	Uncharacterized protein related to the periplasmic	98.01
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	97.93
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	97.93
PRK04043	419	tolB translocation protein TolB; Provisional	97.88
KOG1645|consensus	463		97.83
KOG0882|consensus	558		97.82
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.8
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	97.79
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	97.76
KOG3621|consensus	726		97.76
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	97.75
KOG1275|consensus	1118		97.7
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.67
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	97.65
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	97.64
KOG2314|consensus	698		97.63
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	97.61
KOG2041|consensus	1189		97.56
KOG4640|consensus	665		97.55
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	97.49
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	97.44
KOG2114|consensus	933		97.4
KOG4640|consensus	665		97.35
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	97.35
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	97.33
KOG3617|consensus	1416		97.33
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	97.32
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	97.24
KOG1920|consensus	1265		97.22
KOG1008|consensus	783		97.15
KOG0882|consensus	558		97.1
KOG3617|consensus	1416		97.06
KOG2114|consensus	933		97.02
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	97.02
PRK02888	635	nitrous-oxide reductase; Validated	96.95
KOG4649|consensus	354		96.88
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	96.86
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.82
PRK02888	635	nitrous-oxide reductase; Validated	96.8
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	96.78
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	96.74
KOG1008|consensus	783		96.73
KOG1832|consensus	1516		96.69
KOG2314|consensus	698		96.69
KOG1920|consensus	1265		96.69
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	96.58
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.56
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	96.54
KOG2079|consensus	1206		96.45
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	96.39
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	96.35
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	96.35
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	96.35
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	96.33
KOG1916|consensus	1283		96.29
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	96.24
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	96.22
KOG4499|consensus	310		96.17
KOG1916|consensus	1283		96.16
KOG2079|consensus	1206		96.05
KOG2444|consensus	238		96.01
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	95.92
KOG2395|consensus	644		95.89
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	95.78
KOG3621|consensus	726		95.63
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	95.52
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	95.39
PRK13616	591	lipoprotein LpqB; Provisional	95.37
COG3391	381	Uncharacterized conserved protein [Function unknow	95.27
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	95.2
PRK13616	591	lipoprotein LpqB; Provisional	95.17
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	95.11
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	95.06
KOG2444|consensus	238		94.9
COG5276	370	Uncharacterized conserved protein [Function unknow	94.84
KOG4649|consensus	354		94.83
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	94.69
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	94.58
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	94.25
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	94.08
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	94.06
KOG2395|consensus	644		93.88
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	93.82
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	93.73
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	93.73
PHA02713	557	hypothetical protein; Provisional	93.66
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	93.26
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	93.21
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	93.2
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	93.14
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	93.13
COG3391	381	Uncharacterized conserved protein [Function unknow	92.88
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	92.88
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	92.85
PHA02713	557	hypothetical protein; Provisional	92.84
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	92.54
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	92.36
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	92.26
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	92.19
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	92.11
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	91.72
PF08145	260	BOP1NT: BOP1NT (NUC169) domain; InterPro: IPR01295	91.54
KOG3630|consensus	1405		91.49
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	91.4
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	91.39
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	91.33
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	91.09
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	90.62
KOG2377|consensus	657		90.46
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	90.45
KOG2280|consensus	829		90.33
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	89.99
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	89.84
KOG4441|consensus	571		89.7
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	89.58
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	89.33
KOG3630|consensus	1405		88.73
KOG4460|consensus	741		88.56
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	88.02
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	87.88
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	87.77
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	87.52
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	87.26
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	87.26
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	86.83
PHA03098	534	kelch-like protein; Provisional	86.57
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	86.55
KOG4441|consensus	571		86.43
COG5167	776	VID27 Protein involved in vacuole import and degra	86.09
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	86.01
PF14269	299	Arylsulfotran_2: Arylsulfotransferase (ASST)	85.94
PF12768	281	Rax2: Cortical protein marker for cell polarity	85.9
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	85.58
KOG4499|consensus	310		85.03
KOG1900|consensus	1311		84.81
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	84.28
KOG2247|consensus	615		84.17
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	84.0
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	83.99
PRK10115	686	protease 2; Provisional	83.79
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	83.62
PRK13684	334	Ycf48-like protein; Provisional	83.12
KOG2377|consensus	657		82.68
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	82.61
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	82.53
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	82.47
PF05935	477	Arylsulfotrans: Arylsulfotransferase (ASST); Inter	82.11
PF07716	54	bZIP_2: Basic region leucine zipper; InterPro: IPR	81.9
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	81.44
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	80.54

>KOG0300|consensus

Probab=100.00  E-value=5.7e-41  Score=273.75  Aligned_cols=298  Identities=43%  Similarity=0.667  Sum_probs=240.0

Q ss_pred             cCChhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH--hhccccccccccCCCCCCchhhhccccCcccccccccCC
Q psy8430          45 VLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLM--EKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNP  122 (361)
Q Consensus        45 ~~~~~~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (361)
                      .-+...|.||++||.++|+|++.||.||.+|+++++.+.  ++...+........    ......    ..+.+ .....
T Consensus        39 ~~da~~RarL~~LFgqIErEFe~LY~EN~aL~~~~di~~~~~r~aaeGqA~~~a~----~~~~G~----qlk~K-~S~~t  109 (481)
T KOG0300|consen   39 VDDAPYRARLYQLFGQIEREFETLYAENCALQERADIVQLTARSAAEGQAANVAA----QEVFGV----QLKGK-SSRKT  109 (481)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhhhhhhhhhccccccchhh----hccccc----ccccc-cchhh
Confidence            346679999999999999999999999999999987665  33222211110000    000000    00111 22233


Q ss_pred             CccccceeeeeeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCC
Q psy8430         123 SAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGH  202 (361)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h  202 (361)
                      .+...+....+++.+++++++|..+...+.+++.|.||+..|+.++.....+.+.+++.|.+.+||.+++|+|+.++.||
T Consensus       110 ~q~~qKl~t~~ka~tsrivssFk~~t~~~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH  189 (481)
T KOG0300|consen  110 IQMGQKLRTALKAPTSRIVSSFKDGTVKFRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGH  189 (481)
T ss_pred             hhhhHHHHHhhcCCcchheeeecCCceeEeehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeeccc
Confidence            45567778899999999999999999999999999999999999999998899999999999999999999999999999


Q ss_pred             CCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCC------CC--------CCCCCCceecccccEEEe
Q psy8430         203 SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLD------ES--------KEPDESSITLRTPVKELL  268 (361)
Q Consensus       203 ~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~------~~--------~~~~~~~~~~~~~~~~~~  268 (361)
                      .+.|++|+|++.+.++++++.|++.+||...-.++++.........      ..        ..........+.|+..+.
T Consensus       190 ~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~lt  269 (481)
T KOG0300|consen  190 TGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLT  269 (481)
T ss_pred             ccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeee
Confidence            9999999999999999999999999999866666666533221111      10        001111234567889999


Q ss_pred             CCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCC
Q psy8430         269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLD  340 (361)
Q Consensus       269 ~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d  340 (361)
                      +|.+.|.++.|...|+.+++++.|.+..+||+++|+.+..+.+|....+.        ++++.+     .|.++|+|  |
T Consensus       270 gH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsS-----rDtTFRLW--D  342 (481)
T KOG0300|consen  270 GHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSS-----RDTTFRLW--D  342 (481)
T ss_pred             ccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEec-----cCceeEec--c
Confidence            99999999999999999999999999999999999999999999877665        889999     99999999  9


Q ss_pred             CCCCCCcceeeeeecccccCC
Q psy8430         341 CGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       341 ~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      +   |..++.|.+|+||+++|
T Consensus       343 F---ReaI~sV~VFQGHtdtV  360 (481)
T KOG0300|consen  343 F---REAIQSVAVFQGHTDTV  360 (481)
T ss_pred             c---hhhcceeeeecccccce
Confidence            9   88899999999999875

>KOG0271|consensus

Probab=100.00  E-value=1.9e-33  Score=234.78  Aligned_cols=172  Identities=24%  Similarity=0.339  Sum_probs=156.5

Q ss_pred             eeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430         153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       153 ~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~  232 (361)
                      +-..+.||.++|.|+.|+|+|..|++|+.|.++++||+.+..+..+.++|...|.||+|+|||+.+++|+.||.|++||.
T Consensus       107 CssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdp  186 (480)
T KOG0271|consen  107 CSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDP  186 (480)
T ss_pred             eccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecC
Confidence            34467799999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-----CCCEEEEEeCCCcEEEeeCCCCeEEE
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-----DGEQVITASWDRVANLFDVETGTILQ  307 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~s~~~d~~v~iwd~~~~~~~~  307 (361)
                      .++.+                         ....+.+|...|++++|.|     ..++|++++.||.|+|||+..+.++.
T Consensus       187 ktg~~-------------------------~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~  241 (480)
T KOG0271|consen  187 KTGQQ-------------------------IGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVR  241 (480)
T ss_pred             CCCCc-------------------------ccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEE
Confidence            88754                         4567889999999999987     56799999999999999999999999


Q ss_pred             EeecCCCCCeE-------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430         308 SLTGHDEEPHI-------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST  360 (361)
Q Consensus       308 ~~~~h~~~v~~-------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~  360 (361)
                      .+.+|+.+|+|       +++|++     .|++|++|  +.   .. +.+...|+||..-
T Consensus       242 ~lsgHT~~VTCvrwGG~gliySgS-----~DrtIkvw--~a---~d-G~~~r~lkGHahw  290 (480)
T KOG0271|consen  242 TLSGHTASVTCVRWGGEGLIYSGS-----QDRTIKVW--RA---LD-GKLCRELKGHAHW  290 (480)
T ss_pred             EeccCccceEEEEEcCCceEEecC-----CCceEEEE--Ec---cc-hhHHHhhcccchh
Confidence            99999999999       677777     99999999  76   33 5678889999753

>KOG0272|consensus

Probab=100.00  E-value=1e-32  Score=233.08  Aligned_cols=214  Identities=20%  Similarity=0.249  Sum_probs=178.1

Q ss_pred             eccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEe
Q psy8430         135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPG--QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL  212 (361)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~--~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~  212 (361)
                      +.-+...++|..  .++..+.+|.||.+.|.++.|+|.  +..++||+.||++++|++.+..++..+.+|...|..++|+
T Consensus       193 ~swsG~~kvW~~--~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafH  270 (459)
T KOG0272|consen  193 GSWSGLVKVWSV--PQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFH  270 (459)
T ss_pred             eecCCceeEeec--CCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhhcchhhheeeeec
Confidence            344444445544  456899999999999999999996  5699999999999999999989999999999999999999


Q ss_pred             cCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCC--C------------CCCCCce--ecccccEEEeCCCCcEEE
Q psy8430         213 PNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDES--K------------EPDESSI--TLRTPVKELLGHSNVVIA  276 (361)
Q Consensus       213 ~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~--~------------~~~~~~~--~~~~~~~~~~~~~~~v~~  276 (361)
                      |+|++|+|+|.|.+-++||+.++.++......+.....  .            ......+  ....++..+.+|..+|.+
T Consensus       271 PsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~  350 (459)
T KOG0272|consen  271 PSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILS  350 (459)
T ss_pred             CCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceee
Confidence            99999999999999999999999886654333322110  0            0111122  234578888999999999


Q ss_pred             EEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE---------EEEEcCCCcccCCCeEEEEcCCCCCCCCc
Q psy8430         277 ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI---------LCVSSYYSKVSCDLFQRIQHLDCGTSENP  347 (361)
Q Consensus       277 ~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~---------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~  347 (361)
                      ++|+|+|-.++||+.|++++|||++..+.+.++.+|++.|+.         +++|++     +|++++||  ..   +. 
T Consensus       351 V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~Tas-----yD~t~kiW--s~---~~-  419 (459)
T KOG0272|consen  351 VAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTAS-----YDNTVKIW--ST---RT-  419 (459)
T ss_pred             EeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcc-----cCcceeee--cC---CC-
Confidence            999999999999999999999999999999999999998876         677777     99999999  76   44 


Q ss_pred             ceeeeeecccccCC
Q psy8430         348 IHSVCVFQDIQSTG  361 (361)
Q Consensus       348 ~~~v~~~~~h~~~~  361 (361)
                      .+++.++.||.+.|
T Consensus       420 ~~~~ksLaGHe~kV  433 (459)
T KOG0272|consen  420 WSPLKSLAGHEGKV  433 (459)
T ss_pred             cccchhhcCCccce
Confidence            67899999999865

>KOG0271|consensus

Probab=99.97  E-value=1.5e-31  Score=223.45  Aligned_cols=204  Identities=24%  Similarity=0.340  Sum_probs=163.9

Q ss_pred             CccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE-EEEEeCCCCCeEEEEEec-----CCCEEEE
Q psy8430         147 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC-VLQYSGHSGSVNSVRFLP-----NKDLVLS  220 (361)
Q Consensus       147 ~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~-~~~~~~h~~~v~~v~~~~-----~~~~l~s  220 (361)
                      +..+..++.+.++|...|.|++|+|||..||+|+.||+|++||..+|+. ...+.+|...|++++|.|     ..++|++
T Consensus       143 D~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las  222 (480)
T KOG0271|consen  143 DLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLAS  222 (480)
T ss_pred             ccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceec
Confidence            3355678899999999999999999999999999999999999998854 567899999999999987     4668999


Q ss_pred             EECCCcEEEEeccccccccCCCCCCC------------------------------------------------------
Q psy8430         221 ASGDKSVHIWQAVINWECLNNDNDSD------------------------------------------------------  246 (361)
Q Consensus       221 ~~~d~~i~lwd~~~~~~~~~~~~~~~------------------------------------------------------  246 (361)
                      ++.||.++|||+..+.++........                                                      
T Consensus       223 ~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~L  302 (480)
T KOG0271|consen  223 SSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVL  302 (480)
T ss_pred             ccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhh
Confidence            99999999999887644332111000                                                      


Q ss_pred             ----CCCCC-C-----------------------------CCCC------ceecccccEEEeCCCCcEEEEEEcCCCCEE
Q psy8430         247 ----LDESK-E-----------------------------PDES------SITLRTPVKELLGHSNVVIAADWLSDGEQV  286 (361)
Q Consensus       247 ----~~~~~-~-----------------------------~~~~------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  286 (361)
                          +.... .                             .+..      .....+|+..+.+|..-|+.+.|+||++++
T Consensus       303 Rtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~I  382 (480)
T KOG0271|consen  303 RTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYI  382 (480)
T ss_pred             hccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEE
Confidence                00000 0                             0000      012224566788999999999999999999


Q ss_pred             EEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccc
Q psy8430         287 ITASWDRVANLFDVETGTILQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQ  358 (361)
Q Consensus       287 ~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~  358 (361)
                      ++++-|.+|++||.++|+.+.++.+|-..|+.        +++|++     .|.++++|  |+   +. .....-|+||.
T Consensus       383 ASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~S-----kDsTLKvw--~V---~t-kKl~~DLpGh~  451 (480)
T KOG0271|consen  383 ASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGS-----KDSTLKVW--DV---RT-KKLKQDLPGHA  451 (480)
T ss_pred             EEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcC-----CCceEEEE--Ee---ee-eeecccCCCCC
Confidence            99999999999999999999999999999987        777778     99999999  99   65 66788899998


Q ss_pred             cCC
Q psy8430         359 STG  361 (361)
Q Consensus       359 ~~~  361 (361)
                      +.|
T Consensus       452 DEV  454 (480)
T KOG0271|consen  452 DEV  454 (480)
T ss_pred             ceE
Confidence            754

>KOG0263|consensus

Probab=99.97  E-value=1.5e-30  Score=235.83  Aligned_cols=180  Identities=29%  Similarity=0.400  Sum_probs=161.7

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEE
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI  229 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~l  229 (361)
                      .....+++.||.++|..+.|+|+.++|++||.|++||+|.+.+..++..++||..+|+++.|+|.|-+|||||.|++.++
T Consensus       440 ~~~~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArL  519 (707)
T KOG0263|consen  440 SSGTSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARL  519 (707)
T ss_pred             CCceeEEeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeee
Confidence            33455669999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEe
Q psy8430         230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL  309 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~  309 (361)
                      |.....                          .|.+.+.+|-+-|.+++|||+..|+++||.|.+|++||+.+|..++.+
T Consensus       520 Ws~d~~--------------------------~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF  573 (707)
T KOG0263|consen  520 WSTDHN--------------------------KPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIF  573 (707)
T ss_pred             eecccC--------------------------CchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEe
Confidence            976543                          488899999999999999999999999999999999999999999999


Q ss_pred             ecCCCCCeEEEEEcCCCc---ccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         310 TGHDEEPHILCVSSYYSK---VSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       310 ~~h~~~v~~~~~s~s~~~---v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      .||.++|.++.+|+.+-+   .+.||.|.||  |+.+    ...|..|.||+++|
T Consensus       574 ~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iW--Dl~~----~~~v~~l~~Ht~ti  622 (707)
T KOG0263|consen  574 TGHKGPVTALAFSPCGRYLASGDEDGLIKIW--DLAN----GSLVKQLKGHTGTI  622 (707)
T ss_pred             cCCCCceEEEEEcCCCceEeecccCCcEEEE--EcCC----CcchhhhhcccCce
Confidence            999999999666655332   2499999999  8833    55688999998764

>KOG0286|consensus

Probab=99.97  E-value=4.6e-28  Score=196.17  Aligned_cols=181  Identities=22%  Similarity=0.300  Sum_probs=158.1

Q ss_pred             eEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecc
Q psy8430         154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV  233 (361)
Q Consensus       154 ~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~  233 (361)
                      .++|+||.+.|.++.|++|++.|+++|.||.+.|||..+....+-+.-....|..++|+|+|+.+++|+.|..+.||++.
T Consensus        48 rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls  127 (343)
T KOG0286|consen   48 RRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLS  127 (343)
T ss_pred             EEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecc
Confidence            36789999999999999999999999999999999999998888888889999999999999999999999999999987


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCC
Q psy8430         234 INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD  313 (361)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~  313 (361)
                      +...                    .......+.+.+|.+.+.++.|-+ ...|++++.|.+..+||+++|+.+..+.+|.
T Consensus       128 ~~d~--------------------~g~~~v~r~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~g~~~~~f~GH~  186 (343)
T KOG0286|consen  128 TRDA--------------------EGNVRVSRELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIETGQQTQVFHGHT  186 (343)
T ss_pred             cccc--------------------cccceeeeeecCccceeEEEEEcC-CCceEecCCCceEEEEEcccceEEEEecCCc
Confidence            4411                    011134567889999999999987 5689999999999999999999999999999


Q ss_pred             CCCeEEEEEcC----CCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         314 EEPHILCVSSY----YSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       314 ~~v~~~~~s~s----~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      +.|.++-++++    |++.+.|+..+||  |+   |. .+++++|.||.+-|
T Consensus       187 gDV~slsl~p~~~ntFvSg~cD~~aklW--D~---R~-~~c~qtF~ghesDI  232 (343)
T KOG0286|consen  187 GDVMSLSLSPSDGNTFVSGGCDKSAKLW--DV---RS-GQCVQTFEGHESDI  232 (343)
T ss_pred             ccEEEEecCCCCCCeEEecccccceeee--ec---cC-cceeEeeccccccc
Confidence            99998655552    3334599999999  99   77 68999999998754

>KOG0285|consensus

Probab=99.97  E-value=1.9e-29  Score=209.33  Aligned_cols=174  Identities=25%  Similarity=0.391  Sum_probs=157.4

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEE
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  228 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~  228 (361)
                      ...++.+.+.||.+.|.|+++.|...+|++|+.|++|+|||+.+|+...++.||...|..+++++.-.++++++.|+.|+
T Consensus       139 apwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VK  218 (460)
T KOG0285|consen  139 APWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVK  218 (460)
T ss_pred             CcceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeE
Confidence            35678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEE
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS  308 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~  308 (361)
                      .||+...                          +.++.+.||-+.|++++.+|.-..|++|+.|.+++|||+++...+.+
T Consensus       219 CwDLe~n--------------------------kvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~  272 (460)
T KOG0285|consen  219 CWDLEYN--------------------------KVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHV  272 (460)
T ss_pred             EEechhh--------------------------hhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEE
Confidence            9998765                          36788899999999999999999999999999999999999999999


Q ss_pred             eecCCCCCeEE--------EEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeeccccc
Q psy8430         309 LTGHDEEPHIL--------CVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQS  359 (361)
Q Consensus       309 ~~~h~~~v~~~--------~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~  359 (361)
                      +.+|..+|..+        ++|++     .|++||+|  |++.++    ...++..|+-
T Consensus       273 l~GH~~~V~~V~~~~~dpqvit~S-----~D~tvrlW--Dl~agk----t~~tlt~hkk  320 (460)
T KOG0285|consen  273 LSGHTNPVASVMCQPTDPQVITGS-----HDSTVRLW--DLRAGK----TMITLTHHKK  320 (460)
T ss_pred             ecCCCCcceeEEeecCCCceEEec-----CCceEEEe--eeccCc----eeEeeecccc
Confidence            99999999884        55666     99999999  984443    3556666654

>KOG0263|consensus

Probab=99.97  E-value=1.6e-29  Score=229.20  Aligned_cols=181  Identities=28%  Similarity=0.456  Sum_probs=162.3

Q ss_pred             ceeeeeeeccceeEE-eeecC-----------------ccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy8430         128 KTTNKLKVQTSKIVS-SFKTS-----------------LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWS  189 (361)
Q Consensus       128 ~~~~~~~~~~~~~~~-~~~~~-----------------~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd  189 (361)
                      ...+.+.+|.+.+.. .|.++                 ..+..++-.++||..+|+++.|+|.|-+|||||.|++.++|.
T Consensus       442 ~~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs  521 (707)
T KOG0263|consen  442 GTSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWS  521 (707)
T ss_pred             ceeEEeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeee
Confidence            345567888887754 23322                 245567777889999999999999999999999999999999


Q ss_pred             CCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC
Q psy8430         190 TQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG  269 (361)
Q Consensus       190 ~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (361)
                      .....+++.+.+|-+-|.|+.|+|+..++++||.|+++++||+.++                          ..++.+.|
T Consensus       522 ~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G--------------------------~~VRiF~G  575 (707)
T KOG0263|consen  522 TDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTG--------------------------NSVRIFTG  575 (707)
T ss_pred             cccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCC--------------------------cEEEEecC
Confidence            9999999999999999999999999999999999999999999877                          36888899


Q ss_pred             CCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         270 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       270 ~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      |.++|.+++|+|+|++|++|+.||.|.+||+.+|+.+..+.+|++.|.+        ++++++     .|.+|++|  |+
T Consensus       576 H~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg-----~DnsV~lW--D~  648 (707)
T KOG0263|consen  576 HKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGG-----ADNSVRLW--DL  648 (707)
T ss_pred             CCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecC-----CCCeEEEE--Ec
Confidence            9999999999999999999999999999999999999999999999888        777888     99999999  66

>KOG0279|consensus

Probab=99.96  E-value=3.4e-28  Score=195.70  Aligned_cols=173  Identities=24%  Similarity=0.374  Sum_probs=151.5

Q ss_pred             eccceeEEeeec---CccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEE
Q psy8430         135 VQTSKIVSSFKT---SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF  211 (361)
Q Consensus       135 ~~~~~~~~~~~~---~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~  211 (361)
                      ++.+..+-.|.-   +...+..++.|+||...|..+..++||++.+++|.|+++++||+.+|+..+.|.+|..-|.+++|
T Consensus        34 asrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~  113 (315)
T KOG0279|consen   34 ASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAF  113 (315)
T ss_pred             cccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEe
Confidence            344444433433   34667789999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCC--CCcEEEEEEcCC--CCEEE
Q psy8430         212 LPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGH--SNVVIAADWLSD--GEQVI  287 (361)
Q Consensus       212 ~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~--~~~l~  287 (361)
                      +|+.+.+++|+.|++|++|++...                           +..++..+  ++.|.++.|+|+  ..+|+
T Consensus       114 s~dn~qivSGSrDkTiklwnt~g~---------------------------ck~t~~~~~~~~WVscvrfsP~~~~p~Iv  166 (315)
T KOG0279|consen  114 STDNRQIVSGSRDKTIKLWNTLGV---------------------------CKYTIHEDSHREWVSCVRFSPNESNPIIV  166 (315)
T ss_pred             cCCCceeecCCCcceeeeeeeccc---------------------------EEEEEecCCCcCcEEEEEEcCCCCCcEEE
Confidence            999999999999999999998654                           44455443  789999999997  78999


Q ss_pred             EEeCCCcEEEeeCCCCeEEEEeecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         288 TASWDRVANLFDVETGTILQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       288 s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      +++.|++|++||+++.+....+.+|++.++.        ++++|+     .||.+-+|  |+
T Consensus       167 s~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGg-----kdg~~~Lw--dL  221 (315)
T KOG0279|consen  167 SASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGG-----KDGEAMLW--DL  221 (315)
T ss_pred             EccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCC-----CCceEEEE--Ec
Confidence            9999999999999999999999999999988        555666     99999999  77

>KOG0272|consensus

Probab=99.96  E-value=1.4e-29  Score=214.27  Aligned_cols=158  Identities=25%  Similarity=0.450  Sum_probs=147.1

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEE
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  228 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~  228 (361)
                      .+...+....||...|.+++|.|||.+++|||.|..-+|||+++|+++..+.+|...|.+|+|+|+|..++||+.|++++
T Consensus       291 ~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~k  370 (459)
T KOG0272|consen  291 ETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCK  370 (459)
T ss_pred             ccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEE
Confidence            44556666789999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEeeCCCCeEEE
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQ  307 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~  307 (361)
                      |||++..                          ..+..+.+|.+-|+.+.|+| .|.+|+|++.|++++||..++..+++
T Consensus       371 VWDLR~r--------------------------~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~k  424 (459)
T KOG0272|consen  371 VWDLRMR--------------------------SELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLK  424 (459)
T ss_pred             Eeeeccc--------------------------ccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCcccch
Confidence            9999754                          35788899999999999999 88999999999999999999999999


Q ss_pred             EeecCCCCCeE--------EEEEcCCCcccCCCeEEEE
Q psy8430         308 SLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQ  337 (361)
Q Consensus       308 ~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW  337 (361)
                      ++.||.+.|.+        .++|++     .|.++++|
T Consensus       425 sLaGHe~kV~s~Dis~d~~~i~t~s-----~DRT~KLW  457 (459)
T KOG0272|consen  425 SLAGHEGKVISLDISPDSQAIATSS-----FDRTIKLW  457 (459)
T ss_pred             hhcCCccceEEEEeccCCceEEEec-----cCceeeec
Confidence            99999999988        566666     99999999

>KOG0295|consensus

Probab=99.96  E-value=1.2e-29  Score=210.89  Aligned_cols=293  Identities=21%  Similarity=0.223  Sum_probs=220.5

Q ss_pred             cccccceeecccchhhhHHHhhcCCcCCcccCChhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhccccccccc
Q psy8430          15 KRTASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIINE   94 (361)
Q Consensus        15 ~~~~~~~~~~l~~~~~~~~~~~L~~e~~~~~~~~~~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~~~~~~~~~   94 (361)
                      +|+++.|-.|.+.+++.+....+..+-+   +....++.       ++.-+++.++...++|+++.+|+........+..
T Consensus        11 ~ei~~aiadl~g~n~~~es~~i~~~~~~---~~~~~~~~-------~g~ll~kkwtSv~rlqKki~~Les~l~~~~~el~   80 (406)
T KOG0295|consen   11 DEINMAIADLSGSNGYSESDRIFHKEAS---LATEMRKK-------DGGLLEKKWTSVDRLQKKIRELESKLDETGDELI   80 (406)
T ss_pred             HHHHHHHHhhhccccccccceeEeecCC---Cccccccc-------ccceeeccccccchhHHHHHHHHhhhcccccccc
Confidence            7899999999998988888888776655   22233444       5667788899999999999999998777654432


Q ss_pred             cCC-CCCCchhhhccccCcccccccccCCCccccceeeeeee--------ccceeEEeeecCccceeeeEEeeccCCCeE
Q psy8430          95 KYP-ECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKV--------QTSKIVSSFKTSLLSCYKIRSFSGHRDGVW  165 (361)
Q Consensus        95 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~  165 (361)
                      ... .........-++    ..++..........-....+..        ..+..+.+|  +..++++.+.|+||...|.
T Consensus        81 ~g~pt~~~~~~~~wip----Rp~l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~--D~~tg~~e~~LrGHt~sv~  154 (406)
T KOG0295|consen   81 AGDPTGSKRTPALWIP----RPNLVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVF--DTETGELERSLRGHTDSVF  154 (406)
T ss_pred             cCCCCcCccChhhcCC----CCCchhhhhccccceeeeeeccCceEEEEecCCceEEEE--Eccchhhhhhhhcccccee
Confidence            221 111111111111    1011111111111111111111        112223333  3456677999999999999


Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEeCCC-CeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCC
Q psy8430         166 DVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDND  244 (361)
Q Consensus       166 ~l~~~~~~~~l~s~s~d~~i~~wd~~~-~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~  244 (361)
                      ++.|+..|.+|++++.|-.+++||..+ .+++....+|...|.+++|-|.|..+++++.|.+|+.|++.++.        
T Consensus       155 di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~--------  226 (406)
T KOG0295|consen  155 DISFDASGKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGY--------  226 (406)
T ss_pred             EEEEecCccEEEecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccce--------
Confidence            999999999999999999999999977 47778888999999999999999999999999999999998874        


Q ss_pred             CCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE------
Q psy8430         245 SDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI------  318 (361)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~------  318 (361)
                                        ++.++.+|...|..+..+.||..+++++.|.++++|-+.+++|...+..|..+|-+      
T Consensus       227 ------------------cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~  288 (406)
T KOG0295|consen  227 ------------------CVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPE  288 (406)
T ss_pred             ------------------eEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEeccc
Confidence                              78899999999999999999999999999999999999999999999889888887      


Q ss_pred             -----------------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430         319 -----------------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST  360 (361)
Q Consensus       319 -----------------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~  360 (361)
                                       ++++++     .|++||+|  |+   .. +.|+.++.||..-
T Consensus       289 ~~~~~i~~at~~~~~~~~l~s~S-----rDktIk~w--dv---~t-g~cL~tL~ghdnw  336 (406)
T KOG0295|consen  289 SSYPSISEATGSTNGGQVLGSGS-----RDKTIKIW--DV---ST-GMCLFTLVGHDNW  336 (406)
T ss_pred             ccCcchhhccCCCCCccEEEeec-----ccceEEEE--ec---cC-CeEEEEEecccce
Confidence                             555555     99999999  77   33 5889999999764

>KOG0275|consensus

Probab=99.96  E-value=9.2e-31  Score=214.73  Aligned_cols=306  Identities=18%  Similarity=0.200  Sum_probs=205.4

Q ss_pred             ccccccccccceeecccchhhhHHHhhcCCcCCcc--cCC-------hh-----------------HHHHHHHHHHHHHH
Q psy8430          10 KSTKHKRTASGKLSNLGDQDLSMLRTHLNSEYDDV--VLP-------SS-----------------VKFKLNSLFSQIER   63 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~~~~~L~~e~~~~--~~~-------~~-----------------~~~~l~~~~~~~e~   63 (361)
                      +..+.....|+|.+|++++++...+++|++|.+-+  ..+       +.                 .+++|.++++++--
T Consensus         3 ieiessdVIrli~QflKE~~L~rtl~tLQeEt~VSLNTVDSvd~Fv~dI~sG~WD~VL~~vqsLKLP~kkL~dLYEqivl   82 (508)
T KOG0275|consen    3 IEIESSDVIRLIEQFLKENSLHRTLQTLQEETNVSLNTVDSVDGFVNDINSGHWDTVLKTVQSLKLPDKKLIDLYEQIVL   82 (508)
T ss_pred             eeeecchHHHHHHHHHhhhhHHHHHHHHHHhhccceeechhHHHHHHhcccCchHHHHHHHHhccCchhHHHHHHHHHHH
Confidence            33444678899999999999999999999998821  111       11                 16788888888776


Q ss_pred             HHHHHHHHhhh----------------hHHHHHHHHhhcccccccc-ccCC----CCCCchhhhccccCcccccccccCC
Q psy8430          64 EFELLYLENLN----------------LQDKIDMLMEKLDRESIIN-EKYP----ECNDMECVTNMNKNFNKQKVLASNP  122 (361)
Q Consensus        64 ~~~~l~~e~~~----------------l~~~~~~l~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  122 (361)
                      |+-+|.+--.+                -.+++..++..+...-... +.+.    +......+..   ...+..+++++.
T Consensus        83 EliELREL~tAR~~lRQTdpM~~lKQ~~peRy~~lE~ll~R~YFDp~EaY~dssKEkrRa~IAQ~---ls~EV~VVppSR  159 (508)
T KOG0275|consen   83 ELIELRELGTARSLLRQTDPMIMLKQIQPERYIRLENLLNRSYFDPREAYGDSSKEKRRAVIAQA---LSGEVHVVPPSR  159 (508)
T ss_pred             HHHHHHhhhHHHHHHhccCceehhhccChHHHHHHHHHhcccccChhhhcCcchHHHHHHHHHHH---hcCceEEcChHH
Confidence            66655432211                0122222222111100000 0000    0000000000   111233333443


Q ss_pred             CccccceeeeeeeccceeEEeeecCccc--------------eeeeEEee-ccCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q psy8430         123 SAQKLKTTNKLKVQTSKIVSSFKTSLLS--------------CYKIRSFS-GHRDGVWDVAVRPGQPVLGSASADRTVRL  187 (361)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~l~-~h~~~V~~l~~~~~~~~l~s~s~d~~i~~  187 (361)
                      ........-.|..|.+.+-..-..+..+              ..+.++++ |.++.+.|..|+|||++|++||.||.|-+
T Consensus       160 LlaLlGQaLKWQqHQGLLPPGt~iDLFRGkAA~K~~~Ee~~Pt~l~r~IKFg~KSh~EcA~FSPDgqyLvsgSvDGFiEV  239 (508)
T KOG0275|consen  160 LLALLGQALKWQQHQGLLPPGTTIDLFRGKAAMKDQEEERYPTQLARSIKFGQKSHVECARFSPDGQYLVSGSVDGFIEV  239 (508)
T ss_pred             HHHHHHHHhhhHhhcCCCCCCceeeeccchhhhhhhHhhhchHHhhhheecccccchhheeeCCCCceEeeccccceeee
Confidence            3334444455665555432211111111              12333443 56778999999999999999999999999


Q ss_pred             EeCCCCeEEEE--------EeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCcee
Q psy8430         188 WSTQTGKCVLQ--------YSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSIT  259 (361)
Q Consensus       188 wd~~~~~~~~~--------~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (361)
                      ||.-+|+....        |-.++.+|.|+.|+.+..++++|+.||.|++|.+.++.                       
T Consensus       240 Wny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~-----------------------  296 (508)
T KOG0275|consen  240 WNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQ-----------------------  296 (508)
T ss_pred             ehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecch-----------------------
Confidence            99998865433        34588999999999999999999999999999998874                       


Q ss_pred             cccccEEEe-CCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE--------EEEEcCCCcccC
Q psy8430         260 LRTPVKELL-GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI--------LCVSSYYSKVSC  330 (361)
Q Consensus       260 ~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~--------~~~s~s~~~v~~  330 (361)
                         +++.+. .|...|+++.|+.|+..+++++.|.++++.-+.+|+++..+.+|+..|..        .+.+++     .
T Consensus       297 ---ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaS-----s  368 (508)
T KOG0275|consen  297 ---CLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISAS-----S  368 (508)
T ss_pred             ---HHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEec-----C
Confidence               566665 89999999999999999999999999999999999999999999999988        455566     9


Q ss_pred             CCeEEEEcCCCCCCCCcceeeeeec
Q psy8430         331 DLFQRIQHLDCGTSENPIHSVCVFQ  355 (361)
Q Consensus       331 dg~i~iW~~d~~~~~~~~~~v~~~~  355 (361)
                      ||+|++|  +.   .. ..|+.+|.
T Consensus       369 DgtvkvW--~~---Kt-teC~~Tfk  387 (508)
T KOG0275|consen  369 DGTVKVW--HG---KT-TECLSTFK  387 (508)
T ss_pred             CccEEEe--cC---cc-hhhhhhcc
Confidence            9999999  76   22 45666664

>KOG0286|consensus

Probab=99.96  E-value=1.9e-27  Score=192.59  Aligned_cols=167  Identities=25%  Similarity=0.396  Sum_probs=146.2

Q ss_pred             CccceeeeEEeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCC
Q psy8430         147 SLLSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK  225 (361)
Q Consensus       147 ~~~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~  225 (361)
                      +..+++.+..|.||.+.|.+++++| +++.+++|+.|++.++||++.+.++++|.+|.+-|++|+|.|+|.-|++|+.|+
T Consensus       172 Die~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~  251 (343)
T KOG0286|consen  172 DIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDA  251 (343)
T ss_pred             EcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCc
Confidence            3367789999999999999999999 999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE
Q psy8430         226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI  305 (361)
Q Consensus       226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~  305 (361)
                      ++++||++...++.                        +........+|++++|+..|++|++|..|.++.+||.-.++.
T Consensus       252 tcRlyDlRaD~~~a------------------------~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~  307 (343)
T KOG0286|consen  252 TCRLYDLRADQELA------------------------VYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGER  307 (343)
T ss_pred             eeEEEeecCCcEEe------------------------eeccCcccCCceeEEEcccccEEEeeecCCceeEeeccccce
Confidence            99999999774331                        122223456899999999999999999999999999999999


Q ss_pred             EEEeecCCCCCeEEEEEcCCCcc---cCCCeEEEE
Q psy8430         306 LQSLTGHDEEPHILCVSSYYSKV---SCDLFQRIQ  337 (361)
Q Consensus       306 ~~~~~~h~~~v~~~~~s~s~~~v---~~dg~i~iW  337 (361)
                      +..+.+|.+.|+++-+++.+..|   ++|..+|||
T Consensus       308 vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW  342 (343)
T KOG0286|consen  308 VGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIW  342 (343)
T ss_pred             EEEeeccCCeeEEEEECCCCcEEEecchhHheeec
Confidence            99999999999994333332221   399999999

>KOG0281|consensus

Probab=99.96  E-value=2.3e-28  Score=202.28  Aligned_cols=193  Identities=26%  Similarity=0.361  Sum_probs=163.9

Q ss_pred             cceeeeeeeccceeEEeee------cCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe
Q psy8430         127 LKTTNKLKVQTSKIVSSFK------TSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS  200 (361)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~  200 (361)
                      .+.++.+.-..+.+++...      |+.++..+.+.|.||++.|.|+.|..  ..|++||.|.+|++||+++|+++.++.
T Consensus       197 skgVYClQYDD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~--rviisGSSDsTvrvWDv~tge~l~tli  274 (499)
T KOG0281|consen  197 SKGVYCLQYDDEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDE--RVIVSGSSDSTVRVWDVNTGEPLNTLI  274 (499)
T ss_pred             CCceEEEEecchhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeeccc--eEEEecCCCceEEEEeccCCchhhHHh
Confidence            3444555545555554332      33466678889999999999999974  499999999999999999999999999


Q ss_pred             CCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEc
Q psy8430         201 GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL  280 (361)
Q Consensus       201 ~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  280 (361)
                      +|...|..+.|+  ..++++++.|.++.+||+.....                       -++...+.||...|..+.| 
T Consensus       275 hHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~-----------------------it~rrVLvGHrAaVNvVdf-  328 (499)
T KOG0281|consen  275 HHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTD-----------------------ITLRRVLVGHRAAVNVVDF-  328 (499)
T ss_pred             hhcceeEEEEEe--CCEEEEecCCceeEEEeccCchH-----------------------HHHHHHHhhhhhheeeecc-
Confidence            999999999996  56999999999999999875422                       2356778899999999999 


Q ss_pred             CCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeee
Q psy8430         281 SDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVF  354 (361)
Q Consensus       281 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~  354 (361)
                       +.+++++++.|.+|++|++.|+++++++.+|.-.|-|      +++||+     .|.+||+|  |.   .. +.|+.++
T Consensus       329 -d~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQYr~rlvVSGS-----SDntIRlw--di---~~-G~cLRvL  396 (499)
T KOG0281|consen  329 -DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGS-----SDNTIRLW--DI---EC-GACLRVL  396 (499)
T ss_pred             -ccceEEEecCCceEEEEeccceeeehhhhcccccceehhccCeEEEecC-----CCceEEEE--ec---cc-cHHHHHH
Confidence             6779999999999999999999999999999999988      899999     99999999  77   33 7889999


Q ss_pred             ccccc
Q psy8430         355 QDIQS  359 (361)
Q Consensus       355 ~~h~~  359 (361)
                      +||..
T Consensus       397 eGHEe  401 (499)
T KOG0281|consen  397 EGHEE  401 (499)
T ss_pred             hchHH
Confidence            99975

>KOG0645|consensus

Probab=99.96  E-value=9.9e-27  Score=186.58  Aligned_cols=178  Identities=29%  Similarity=0.445  Sum_probs=152.3

Q ss_pred             eeeEEeeccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCC---eEEEEE-eCCCCCeEEEEEecCCCEEEEEECCCc
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTG---KCVLQY-SGHSGSVNSVRFLPNKDLVLSASGDKS  226 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~~---~~~~~~-~~h~~~v~~v~~~~~~~~l~s~~~d~~  226 (361)
                      ..++.+++|.+.|+.++|+|. |..|++||.|+.|++|+...+   .+...+ .+|...|.+++|+|.|++|++||.|.+
T Consensus         5 ~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t   84 (312)
T KOG0645|consen    5 ILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDAT   84 (312)
T ss_pred             eeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccce
Confidence            467889999999999999997 889999999999999999753   344444 379999999999999999999999999


Q ss_pred             EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC---C
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET---G  303 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~---~  303 (361)
                      +.||.-..+                        ...++..+.||.+.|.+++|+++|.+|++++.|.+|-||.+..   .
T Consensus        85 ~~Iw~k~~~------------------------efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEf  140 (312)
T KOG0645|consen   85 VVIWKKEDG------------------------EFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEF  140 (312)
T ss_pred             EEEeecCCC------------------------ceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcE
Confidence            999964321                        2247889999999999999999999999999999999999873   4


Q ss_pred             eEEEEeecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         304 TILQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       304 ~~~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      +|...++.|+.-|..        ++||++     +|.+||+|  .-.. ...-.|+++|.||+.+|
T Consensus       141 ec~aVL~~HtqDVK~V~WHPt~dlL~S~S-----YDnTIk~~--~~~~-dddW~c~~tl~g~~~TV  198 (312)
T KOG0645|consen  141 ECIAVLQEHTQDVKHVIWHPTEDLLFSCS-----YDNTIKVY--RDED-DDDWECVQTLDGHENTV  198 (312)
T ss_pred             EEEeeeccccccccEEEEcCCcceeEEec-----cCCeEEEE--eecC-CCCeeEEEEecCccceE
Confidence            788999999988776        888999     99999999  4432 33368999999998754

>KOG0315|consensus

Probab=99.95  E-value=1.2e-26  Score=183.91  Aligned_cols=207  Identities=19%  Similarity=0.262  Sum_probs=161.6

Q ss_pred             EEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEE
Q psy8430         141 VSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLS  220 (361)
Q Consensus       141 ~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s  220 (361)
                      ++.++..+....++.++.+|++.|+.+.|..+|+++++||.||+++|||++...+.+.++ |..+|++|..+|+..-|++
T Consensus        63 vRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpnQteLis  141 (311)
T KOG0315|consen   63 VRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPNQTELIS  141 (311)
T ss_pred             eEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhcc-CCCCcceEEecCCcceEEe
Confidence            444555556667999999999999999999999999999999999999999977777777 8899999999999999999


Q ss_pred             EECCCcEEEEeccccccccCCCCCCCCCC-----------------------CCCCCCCceecccccEEEeCCCCcEEEE
Q psy8430         221 ASGDKSVHIWQAVINWECLNNDNDSDLDE-----------------------SKEPDESSITLRTPVKELLGHSNVVIAA  277 (361)
Q Consensus       221 ~~~d~~i~lwd~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~  277 (361)
                      |..+|.|++||+.................                       +..........-.|+..+..|.+.+..+
T Consensus       142 ~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C  221 (311)
T KOG0315|consen  142 GDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRC  221 (311)
T ss_pred             ecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEE
Confidence            99999999999987743222111111000                       0000111112224677888999999999


Q ss_pred             EEcCCCCEEEEEeCCCcEEEeeCCCC-eEEEEeecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcc
Q psy8430         278 DWLSDGEQVITASWDRVANLFDVETG-TILQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPI  348 (361)
Q Consensus       278 ~~~~~~~~l~s~~~d~~v~iwd~~~~-~~~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~  348 (361)
                      .+||++++|++++.|.+++||+.++. +.-..+.+|..-+..        +++|++     .|+.+|+|  |+.+    .
T Consensus       222 ~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTas-----sd~~~rlW--~~~~----~  290 (311)
T KOG0315|consen  222 LLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTAS-----SDHTARLW--DLSA----G  290 (311)
T ss_pred             EECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecC-----CCCceeec--cccc----C
Confidence            99999999999999999999999987 555678888877766        555555     99999999  8833    4


Q ss_pred             eeeeeeccccc
Q psy8430         349 HSVCVFQDIQS  359 (361)
Q Consensus       349 ~~v~~~~~h~~  359 (361)
                      ..|...+||.-
T Consensus       291 k~v~qy~gh~K  301 (311)
T KOG0315|consen  291 KEVRQYQGHHK  301 (311)
T ss_pred             ceeeecCCccc
Confidence            45888888864

>KOG0266|consensus

Probab=99.95  E-value=3e-26  Score=211.43  Aligned_cols=190  Identities=30%  Similarity=0.470  Sum_probs=158.3

Q ss_pred             ceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeC-CCCeEEEEEeCCCCCeEEEEEecCCC
Q psy8430         138 SKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWST-QTGKCVLQYSGHSGSVNSVRFLPNKD  216 (361)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~-~~~~~~~~~~~h~~~v~~v~~~~~~~  216 (361)
                      +..+..|........+.+.+.+|...|.+++|+|++.++++|+.|++|++||+ ..+..+.++.+|...|++++|+|+++
T Consensus       180 ~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~  259 (456)
T KOG0266|consen  180 DGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGN  259 (456)
T ss_pred             CCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCC
Confidence            33444444422222477888999999999999999999999999999999999 55689999999999999999999999


Q ss_pred             EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy8430         217 LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVAN  296 (361)
Q Consensus       217 ~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~  296 (361)
                      ++++|+.|++|+|||++++                          .+...+.+|...|++++|++++.+|++++.|+.|+
T Consensus       260 ~i~Sgs~D~tvriWd~~~~--------------------------~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~  313 (456)
T KOG0266|consen  260 LLVSGSDDGTVRIWDVRTG--------------------------ECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIR  313 (456)
T ss_pred             EEEEecCCCcEEEEeccCC--------------------------eEEEeeeccCCceEEEEECCCCCEEEEcCCCccEE
Confidence            9999999999999999875                          47899999999999999999999999999999999


Q ss_pred             EeeCCCCe--EEEEeecCCCC--CeEEEEEcCCCc---ccCCCeEEEEcCCCCCCCCcceeeeeeccccc
Q psy8430         297 LFDVETGT--ILQSLTGHDEE--PHILCVSSYYSK---VSCDLFQRIQHLDCGTSENPIHSVCVFQDIQS  359 (361)
Q Consensus       297 iwd~~~~~--~~~~~~~h~~~--v~~~~~s~s~~~---v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~  359 (361)
                      +||+.++.  ++..+.++...  +..+.++....+   ++.|+.+++|  |+   +. ..++..+.+|..
T Consensus       314 vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w--~l---~~-~~~~~~~~~~~~  377 (456)
T KOG0266|consen  314 VWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLW--DL---RS-GKSVGTYTGHSN  377 (456)
T ss_pred             EEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEE--Ec---cC-CcceeeecccCC
Confidence            99999999  67888877666  666444443221   2389999999  88   44 556777777765

>KOG0266|consensus

Probab=99.95  E-value=5.6e-26  Score=209.61  Aligned_cols=188  Identities=27%  Similarity=0.401  Sum_probs=160.7

Q ss_pred             eeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec
Q psy8430         134 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP  213 (361)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~  213 (361)
                      .+..+..+++|.. ...+..++++.||...|++++|+|+|+++++|+.|++|++||+.+++++..+.+|.+.|.+++|++
T Consensus       220 s~s~D~tiriwd~-~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~  298 (456)
T KOG0266|consen  220 SGSDDKTLRIWDL-KDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSP  298 (456)
T ss_pred             EecCCceEEEeec-cCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECC
Confidence            3344444555555 466789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCC--cEEEEEEcCCCCEEEEEeC
Q psy8430         214 NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSN--VVIAADWLSDGEQVITASW  291 (361)
Q Consensus       214 ~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~s~~~  291 (361)
                      +++.|++++.|+.|++||+.++..                     .   +...+.++..  +++.+.|+|++.++++++.
T Consensus       299 d~~~l~s~s~d~~i~vwd~~~~~~---------------------~---~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~  354 (456)
T KOG0266|consen  299 DGNLLVSASYDGTIRVWDLETGSK---------------------L---CLKLLSGAENSAPVTSVQFSPNGKYLLSASL  354 (456)
T ss_pred             CCCEEEEcCCCccEEEEECCCCce---------------------e---eeecccCCCCCCceeEEEECCCCcEEEEecC
Confidence            999999999999999999987631                     0   3345555544  5999999999999999999


Q ss_pred             CCcEEEeeCCCCeEEEEeecCCCCCeE-----------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeeccc
Q psy8430         292 DRVANLFDVETGTILQSLTGHDEEPHI-----------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDI  357 (361)
Q Consensus       292 d~~v~iwd~~~~~~~~~~~~h~~~v~~-----------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h  357 (361)
                      |+.+++||+..+.++..+.+|...+.+           ++++++     .|+.|++|  |..+    ...++.+.||
T Consensus       355 d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~-----~d~~v~~~--~~~s----~~~~~~l~~h  420 (456)
T KOG0266|consen  355 DRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGS-----EDGSVYVW--DSSS----GGILQRLEGH  420 (456)
T ss_pred             CCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEe-----CCceEEEE--eCCc----cchhhhhcCC
Confidence            999999999999999999999886544           566666     99999999  7732    5568888898

>KOG0279|consensus

Probab=99.95  E-value=4.8e-26  Score=183.37  Aligned_cols=169  Identities=29%  Similarity=0.383  Sum_probs=142.9

Q ss_pred             ecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCC--CCCeEEEEEecC--CCEEEE
Q psy8430         145 KTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGH--SGSVNSVRFLPN--KDLVLS  220 (361)
Q Consensus       145 ~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h--~~~v~~v~~~~~--~~~l~s  220 (361)
                      .++...++..+.|.||...|.+++|++|...|++||.|++|++||+- |.+..++..+  .+.|.|++|+|+  ..++++
T Consensus        89 lWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~-g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs  167 (315)
T KOG0279|consen   89 LWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTL-GVCKYTIHEDSHREWVSCVRFSPNESNPIIVS  167 (315)
T ss_pred             EEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeec-ccEEEEEecCCCcCcEEEEEEcCCCCCcEEEE
Confidence            34456678999999999999999999999999999999999999985 5555555433  789999999997  678999


Q ss_pred             EECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeC
Q psy8430         221 ASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV  300 (361)
Q Consensus       221 ~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~  300 (361)
                      ++.|+++++||+++.                          +....+.||.+.++.+++||||..+++|+.||.+.+||+
T Consensus       168 ~s~DktvKvWnl~~~--------------------------~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL  221 (315)
T KOG0279|consen  168 ASWDKTVKVWNLRNC--------------------------QLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDL  221 (315)
T ss_pred             ccCCceEEEEccCCc--------------------------chhhccccccccEEEEEECCCCCEEecCCCCceEEEEEc
Confidence            999999999999765                          245667899999999999999999999999999999999


Q ss_pred             CCCeEEEEeecCCCCCeEEEEEcCCC--cccCCCeEEEEcCCC
Q psy8430         301 ETGTILQSLTGHDEEPHILCVSSYYS--KVSCDLFQRIQHLDC  341 (361)
Q Consensus       301 ~~~~~~~~~~~h~~~v~~~~~s~s~~--~v~~dg~i~iW~~d~  341 (361)
                      +.++++.++. |...|.+++|++.-.  ....+..|+|||++.
T Consensus       222 ~~~k~lysl~-a~~~v~sl~fspnrywL~~at~~sIkIwdl~~  263 (315)
T KOG0279|consen  222 NEGKNLYSLE-AFDIVNSLCFSPNRYWLCAATATSIKIWDLES  263 (315)
T ss_pred             cCCceeEecc-CCCeEeeEEecCCceeEeeccCCceEEEeccc
Confidence            9999988776 677888888877611  234577899994433

>KOG0273|consensus

Probab=99.94  E-value=2.2e-26  Score=197.44  Aligned_cols=188  Identities=19%  Similarity=0.278  Sum_probs=156.5

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCC
Q psy8430         162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNN  241 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~  241 (361)
                      ..|++++|+.+|.+||+|+.||.+++|+. .|..+.++..|.++|.+++|+..|+++++++.|+++.+||..++.....+
T Consensus       236 kdVT~L~Wn~~G~~LatG~~~G~~riw~~-~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f  314 (524)
T KOG0273|consen  236 KDVTSLDWNNDGTLLATGSEDGEARIWNK-DGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQF  314 (524)
T ss_pred             CCcceEEecCCCCeEEEeecCcEEEEEec-CchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEee
Confidence            57999999999999999999999999997 57778888889999999999999999999999999999999877655443


Q ss_pred             CCCCCC-CC--CCC-------CCC-----CceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEE
Q psy8430         242 DNDSDL-DE--SKE-------PDE-----SSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  306 (361)
Q Consensus       242 ~~~~~~-~~--~~~-------~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~  306 (361)
                      ...+.. .+  +..       ...     -......|+.++.+|.+.|.++.|+|.|.+|++++.|++++||......++
T Consensus       315 ~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~  394 (524)
T KOG0273|consen  315 EFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSV  394 (524)
T ss_pred             eeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcch
Confidence            333322 11  100       000     012334688999999999999999999999999999999999999999999


Q ss_pred             EEeecCCCCCeE-----------------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         307 QSLTGHDEEPHI-----------------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       307 ~~~~~h~~~v~~-----------------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      ..+.+|+..|+.                 .+++++     .|++|++|  |+   .. +.++++|..|+.+|
T Consensus       395 ~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas-----~dstV~lw--dv---~~-gv~i~~f~kH~~pV  455 (524)
T KOG0273|consen  395 HDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASAS-----FDSTVKLW--DV---ES-GVPIHTLMKHQEPV  455 (524)
T ss_pred             hhhhhhccceeeEeecCCCCccCCCcCCceEEEee-----cCCeEEEE--Ec---cC-CceeEeeccCCCce
Confidence            999999977666                 555566     99999999  87   44 78899999999876

>PTZ00421 coronin; Provisional

Probab=99.94  E-value=3.9e-25  Score=203.60  Aligned_cols=160  Identities=25%  Similarity=0.360  Sum_probs=133.8

Q ss_pred             EeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCC-------eEEEEEeCCCCCeEEEEEecCC-CEEEEEECCCc
Q psy8430         156 SFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTG-------KCVLQYSGHSGSVNSVRFLPNK-DLVLSASGDKS  226 (361)
Q Consensus       156 ~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~-------~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~  226 (361)
                      .+.||.+.|++++|+| ++++|++|+.|++|++||+.++       .++..+.+|...|.+++|+|++ ++|++++.|++
T Consensus        70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt  149 (493)
T PTZ00421         70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV  149 (493)
T ss_pred             eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE
Confidence            4779999999999999 8889999999999999999764       3567889999999999999975 68999999999


Q ss_pred             EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEE
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  306 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~  306 (361)
                      |+|||+.++                          .....+.+|...|.+++|+|+|.+|++++.|+.|++||+++++.+
T Consensus       150 VrIWDl~tg--------------------------~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v  203 (493)
T PTZ00421        150 VNVWDVERG--------------------------KAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIV  203 (493)
T ss_pred             EEEEECCCC--------------------------eEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEE
Confidence            999999765                          245677889999999999999999999999999999999999999


Q ss_pred             EEeecCCCCCeE-EEEEcCCC---c----ccCCCeEEEEcCCCCC
Q psy8430         307 QSLTGHDEEPHI-LCVSSYYS---K----VSCDLFQRIQHLDCGT  343 (361)
Q Consensus       307 ~~~~~h~~~v~~-~~~s~s~~---~----v~~dg~i~iW~~d~~~  343 (361)
                      .++.+|.+.... .++.....   .    -+.|+.|++|  |+++
T Consensus       204 ~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklW--Dlr~  246 (493)
T PTZ00421        204 SSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLW--DTRK  246 (493)
T ss_pred             EEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEE--eCCC
Confidence            999998765432 12211100   0    0258999999  8843

>KOG0276|consensus

Probab=99.94  E-value=3.1e-26  Score=202.73  Aligned_cols=166  Identities=28%  Similarity=0.422  Sum_probs=151.3

Q ss_pred             ccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-eEEEEEeCCCCCeEEEEEec-CCCEEEEEECCC
Q psy8430         148 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-KCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDK  225 (361)
Q Consensus       148 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~-~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~  225 (361)
                      .++.+.+++|..|..-|.|++.+|..++++++|.|-+|++||.+.+ .+.++|.||...|.+|+|+| |.+.|+++|.|+
T Consensus        84 ynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDr  163 (794)
T KOG0276|consen   84 YNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDR  163 (794)
T ss_pred             cccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccc
Confidence            3778999999999999999999999999999999999999999876 78899999999999999999 667899999999


Q ss_pred             cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC--CCCEEEEEeCCCcEEEeeCCCC
Q psy8430         226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS--DGEQVITASWDRVANLFDVETG  303 (361)
Q Consensus       226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~d~~v~iwd~~~~  303 (361)
                      +|++|.+...                          .|..++.+|...|+++.|-+  +..+|++|+.|.+|+|||..|.
T Consensus       164 TVKVWslgs~--------------------------~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk  217 (794)
T KOG0276|consen  164 TVKVWSLGSP--------------------------HPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTK  217 (794)
T ss_pred             cEEEEEcCCC--------------------------CCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchH
Confidence            9999987654                          47889999999999999987  4479999999999999999999


Q ss_pred             eEEEEeecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCC
Q psy8430         304 TILQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSEN  346 (361)
Q Consensus       304 ~~~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~  346 (361)
                      .|++++.||...|..        +++||+     .||++|||  ...|-|.
T Consensus       218 ~CV~TLeGHt~Nvs~v~fhp~lpiiisgs-----EDGTvriW--hs~Ty~l  261 (794)
T KOG0276|consen  218 SCVQTLEGHTNNVSFVFFHPELPIIISGS-----EDGTVRIW--NSKTYKL  261 (794)
T ss_pred             HHHHHhhcccccceEEEecCCCcEEEEec-----CCccEEEe--cCcceeh
Confidence            999999999999888        788888     99999999  7655443

>KOG0285|consensus

Probab=99.94  E-value=9.3e-26  Score=187.50  Aligned_cols=170  Identities=25%  Similarity=0.366  Sum_probs=151.6

Q ss_pred             CccccceeeeeeeccceeEEeee------------------cCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCc
Q psy8430         123 SAQKLKTTNKLKVQTSKIVSSFK------------------TSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRT  184 (361)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~  184 (361)
                      +..+.+..+.+.+|.+++.++-.                  ++..++++..++.||...|..+++++-..|+++++.|+.
T Consensus       137 WHapwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~  216 (460)
T KOG0285|consen  137 WHAPWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQ  216 (460)
T ss_pred             ccCcceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCe
Confidence            34455666777888887765322                  223677899999999999999999999999999999999


Q ss_pred             EEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceeccccc
Q psy8430         185 VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPV  264 (361)
Q Consensus       185 i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (361)
                      |+.||+...+.++.+.||-+.|.|++.+|.-+.+++|+.|.++++||+++.                          ..+
T Consensus       217 VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr--------------------------~~V  270 (460)
T KOG0285|consen  217 VKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTR--------------------------ASV  270 (460)
T ss_pred             eEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeeccc--------------------------ceE
Confidence            999999999999999999999999999999999999999999999999876                          378


Q ss_pred             EEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE
Q psy8430         265 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI  318 (361)
Q Consensus       265 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~  318 (361)
                      ..+.||..+|.++.+.|....+++|+.|++|++||++.|+...++..|...+.+
T Consensus       271 ~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~hkksvra  324 (460)
T KOG0285|consen  271 HVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRA  324 (460)
T ss_pred             EEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCceeEeeecccceeeE
Confidence            899999999999999998999999999999999999999998888888877776

>KOG0273|consensus

Probab=99.94  E-value=2.9e-25  Score=190.56  Aligned_cols=178  Identities=25%  Similarity=0.382  Sum_probs=150.1

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe----------------------------------
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK----------------------------------  194 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~----------------------------------  194 (361)
                      ..+.++.+|..|+++|.++.|+..|++|++++.|+++.+||..+|.                                  
T Consensus       264 ~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V  343 (524)
T KOG0273|consen  264 KDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHV  343 (524)
T ss_pred             cCchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCceEEE
Confidence            4567888899999999999999999999999999999999986442                                  


Q ss_pred             -------EEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE
Q psy8430         195 -------CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL  267 (361)
Q Consensus       195 -------~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (361)
                             ++.++.+|.+.|.++.|+|.+.+|++++.|++++||.....                          .+...+
T Consensus       344 ~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~--------------------------~~~~~l  397 (524)
T KOG0273|consen  344 CKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQS--------------------------NSVHDL  397 (524)
T ss_pred             EEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCC--------------------------cchhhh
Confidence                   33457789999999999999999999999999999986433                          367788


Q ss_pred             eCCCCcEEEEEEcCCC---------CEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEE
Q psy8430         268 LGHSNVVIAADWLSDG---------EQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQR  335 (361)
Q Consensus       268 ~~~~~~v~~~~~~~~~---------~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~  335 (361)
                      .+|...|+.+.|+|.|         ..+++++.|++|++||+..|.+++++..|..+|+++.+++++-   +.+.||.|.
T Consensus       398 ~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~  477 (524)
T KOG0273|consen  398 QAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVH  477 (524)
T ss_pred             hhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeE
Confidence            9999999999999965         4789999999999999999999999999999999954443311   123999999


Q ss_pred             EEcCCCCCCCCcceeeeeecccc
Q psy8430         336 IQHLDCGTSENPIHSVCVFQDIQ  358 (361)
Q Consensus       336 iW~~d~~~~~~~~~~v~~~~~h~  358 (361)
                      ||  ++   +. ...++.++|..
T Consensus       478 iw--s~---~~-~~l~~s~~~~~  494 (524)
T KOG0273|consen  478 IW--ST---KT-GKLVKSYQGTG  494 (524)
T ss_pred             ec--cc---cc-hheeEeecCCC
Confidence            99  88   33 55677776643

>KOG0295|consensus

Probab=99.94  E-value=1.2e-25  Score=187.14  Aligned_cols=164  Identities=23%  Similarity=0.428  Sum_probs=152.8

Q ss_pred             ecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC----------
Q psy8430         145 KTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN----------  214 (361)
Q Consensus       145 ~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~----------  214 (361)
                      .|+..++.++.++.+|...|..+..+.||.++++++.|.++++|-+.++++...++.|..+|.|++|.|.          
T Consensus       219 ~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at  298 (406)
T KOG0295|consen  219 AWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEAT  298 (406)
T ss_pred             EEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhcc
Confidence            3444678899999999999999999999999999999999999999999999999999999999999882          


Q ss_pred             -----CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy8430         215 -----KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA  289 (361)
Q Consensus       215 -----~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~  289 (361)
                           ++.+.+++.|++|++||+.++                          .++.++.+|.++|..++|+|.|+||+++
T Consensus       299 ~~~~~~~~l~s~SrDktIk~wdv~tg--------------------------~cL~tL~ghdnwVr~~af~p~Gkyi~Sc  352 (406)
T KOG0295|consen  299 GSTNGGQVLGSGSRDKTIKIWDVSTG--------------------------MCLFTLVGHDNWVRGVAFSPGGKYILSC  352 (406)
T ss_pred             CCCCCccEEEeecccceEEEEeccCC--------------------------eEEEEEecccceeeeeEEcCCCeEEEEE
Confidence                 358999999999999999877                          4789999999999999999999999999


Q ss_pred             eCCCcEEEeeCCCCeEEEEeecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         290 SWDRVANLFDVETGTILQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       290 ~~d~~v~iwd~~~~~~~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      ..|+++++||+++++|..++..|...+++        +++||+     -|..+++|  ..
T Consensus       353 aDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGs-----Vdqt~Kvw--Ec  405 (406)
T KOG0295|consen  353 ADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGS-----VDQTVKVW--EC  405 (406)
T ss_pred             ecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEecc-----ccceeeee--ec
Confidence            99999999999999999999999999988        889999     99999999  54

>KOG0284|consensus

Probab=99.94  E-value=8.3e-27  Score=196.67  Aligned_cols=169  Identities=18%  Similarity=0.318  Sum_probs=147.4

Q ss_pred             EEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCC-CCeEEEEEecCCCEEEEEECCCcEEEEecc
Q psy8430         155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHS-GSVNSVRFLPNKDLVLSASGDKSVHIWQAV  233 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~  233 (361)
                      .-++.|..+|.++.|+++|.+++||+.+|.|++|+..-. .+..+++|. ..|.+++|+|....|++++.||+|+|||..
T Consensus       132 tilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmn-nVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~  210 (464)
T KOG0284|consen  132 TILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMN-NVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFR  210 (464)
T ss_pred             HHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchh-hhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEecc
Confidence            345689999999999999999999999999999997543 344555554 999999999999999999999999999976


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCC
Q psy8430         234 INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD  313 (361)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~  313 (361)
                      ..                          +....+.||.--|.++.|||....+++|+.|+.|++||.++|.|+.++.+|.
T Consensus       211 ~~--------------------------kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HK  264 (464)
T KOG0284|consen  211 MP--------------------------KEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHK  264 (464)
T ss_pred             CC--------------------------chhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhcc
Confidence            54                          3556779999999999999999999999999999999999999999999999


Q ss_pred             CCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         314 EEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       314 ~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      ..|..        +++|++     .|..++++  |+   |. ..-+.+++||+..|
T Consensus       265 ntVl~~~f~~n~N~Llt~s-----kD~~~kv~--Di---R~-mkEl~~~r~Hkkdv  309 (464)
T KOG0284|consen  265 NTVLAVKFNPNGNWLLTGS-----KDQSCKVF--DI---RT-MKELFTYRGHKKDV  309 (464)
T ss_pred             ceEEEEEEcCCCCeeEEcc-----CCceEEEE--eh---hH-hHHHHHhhcchhhh
Confidence            99998        566666     99999999  99   53 55588899998643

>KOG0640|consensus

Probab=99.94  E-value=6.9e-26  Score=185.07  Aligned_cols=170  Identities=18%  Similarity=0.262  Sum_probs=140.9

Q ss_pred             EEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC------------CC------eEEEEEeCCCCCeEEEEEecCCC
Q psy8430         155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ------------TG------KCVLQYSGHSGSVNSVRFLPNKD  216 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~------------~~------~~~~~~~~h~~~v~~v~~~~~~~  216 (361)
                      ..+..|++++.+.+|+|||.++++||.|..|+|.|++            .|      -.++++..|...|+++.|+|...
T Consensus       106 ~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~  185 (430)
T KOG0640|consen  106 KYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRET  185 (430)
T ss_pred             EEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhh
Confidence            4577999999999999999999999999999999986            11      35788889999999999999999


Q ss_pred             EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy8430         217 LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVAN  296 (361)
Q Consensus       217 ~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~  296 (361)
                      .|++++.|++|++||......                        +..........+|.+++|+|.|.+++.|..-.+++
T Consensus       186 ILiS~srD~tvKlFDfsK~sa------------------------KrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~r  241 (430)
T KOG0640|consen  186 ILISGSRDNTVKLFDFSKTSA------------------------KRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLR  241 (430)
T ss_pred             eEEeccCCCeEEEEecccHHH------------------------HHHHHHhhccceeeeEeecCCCceEEEecCCCcee
Confidence            999999999999999864311                        11222233567899999999999999999999999


Q ss_pred             EeeCCCCeEEEEe---ecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeec-cccc
Q psy8430         297 LFDVETGTILQSL---TGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQ-DIQS  359 (361)
Q Consensus       297 iwd~~~~~~~~~~---~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~-~h~~  359 (361)
                      +||+.|.+|...-   .+|++.|++        +.++++     .||.|+||  |-    .+.+||.+|. +|.+
T Consensus       242 lYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaS-----kDG~Iklw--DG----VS~rCv~t~~~AH~g  305 (430)
T KOG0640|consen  242 LYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTAS-----KDGAIKLW--DG----VSNRCVRTIGNAHGG  305 (430)
T ss_pred             EEeccceeEeeecCcccccccceeEEEecCCccEEEEec-----cCCcEEee--cc----ccHHHHHHHHhhcCC
Confidence            9999999987654   358888887        667777     99999999  86    4467777774 5654

>PTZ00420 coronin; Provisional

Probab=99.94  E-value=2.8e-24  Score=199.04  Aligned_cols=150  Identities=17%  Similarity=0.258  Sum_probs=124.9

Q ss_pred             eEEeeecCccceeeeEEeeccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCe--------EEEEEeCCCCCeEEEE
Q psy8430         140 IVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGK--------CVLQYSGHSGSVNSVR  210 (361)
Q Consensus       140 ~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~~~--------~~~~~~~h~~~v~~v~  210 (361)
                      ++..|....  ...+..+.+|.+.|++++|+|+ +.+|++|+.|++|++||+.++.        ++..+.+|...|.+++
T Consensus        55 vI~L~~~~r--~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVa  132 (568)
T PTZ00420         55 AIRLENQMR--KPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIID  132 (568)
T ss_pred             EEEeeecCC--CceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEE
Confidence            344444433  3578889999999999999996 7899999999999999997642        3456789999999999


Q ss_pred             EecCCCE-EEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy8430         211 FLPNKDL-VLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA  289 (361)
Q Consensus       211 ~~~~~~~-l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~  289 (361)
                      |+|++.. +++++.|++|++||++++.                          ....+. |...|.+++|+|+|.+|+++
T Consensus       133 f~P~g~~iLaSgS~DgtIrIWDl~tg~--------------------------~~~~i~-~~~~V~SlswspdG~lLat~  185 (568)
T PTZ00420        133 WNPMNYYIMCSSGFDSFVNIWDIENEK--------------------------RAFQIN-MPKKLSSLKWNIKGNLLSGT  185 (568)
T ss_pred             ECCCCCeEEEEEeCCCeEEEEECCCCc--------------------------EEEEEe-cCCcEEEEEECCCCCEEEEE
Confidence            9998875 5789999999999998652                          223333 55789999999999999999


Q ss_pred             eCCCcEEEeeCCCCeEEEEeecCCCCCeE
Q psy8430         290 SWDRVANLFDVETGTILQSLTGHDEEPHI  318 (361)
Q Consensus       290 ~~d~~v~iwd~~~~~~~~~~~~h~~~v~~  318 (361)
                      +.|+.|+|||+++++.+.++.+|.+.+..
T Consensus       186 s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s  214 (568)
T PTZ00420        186 CVGKHMHIIDPRKQEIASSFHIHDGGKNT  214 (568)
T ss_pred             ecCCEEEEEECCCCcEEEEEecccCCcee
Confidence            99999999999999999999999886543

>KOG0645|consensus

Probab=99.93  E-value=4.7e-24  Score=171.28  Aligned_cols=177  Identities=29%  Similarity=0.360  Sum_probs=149.6

Q ss_pred             eeccceeEEeeecC-ccceeeeEEee-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--eEEEEEeCCCCCeEEE
Q psy8430         134 KVQTSKIVSSFKTS-LLSCYKIRSFS-GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVNSV  209 (361)
Q Consensus       134 ~~~~~~~~~~~~~~-~~~~~~~~~l~-~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~--~~~~~~~~h~~~v~~v  209 (361)
                      ...+++.+.+|... ..+..+...+. +|+..|.+++|+|.|++|++||.|.++.||.-..+  +++.++.||...|.|+
T Consensus        32 scg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~V  111 (312)
T KOG0645|consen   32 SCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCV  111 (312)
T ss_pred             eecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEE
Confidence            34555666666665 34445555553 79999999999999999999999999999987654  7899999999999999


Q ss_pred             EEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy8430         210 RFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA  289 (361)
Q Consensus       210 ~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~  289 (361)
                      +|+++|.+||+++.|+.|-||.+..+.+                       ..+...+..|..-|..+.|||...+|+++
T Consensus       112 aws~sG~~LATCSRDKSVWiWe~deddE-----------------------fec~aVL~~HtqDVK~V~WHPt~dlL~S~  168 (312)
T KOG0645|consen  112 AWSASGNYLATCSRDKSVWIWEIDEDDE-----------------------FECIAVLQEHTQDVKHVIWHPTEDLLFSC  168 (312)
T ss_pred             EEcCCCCEEEEeeCCCeEEEEEecCCCc-----------------------EEEEeeeccccccccEEEEcCCcceeEEe
Confidence            9999999999999999999999864322                       23788899999999999999999999999


Q ss_pred             eCCCcEEEeeCC---CCeEEEEeecCCCCCeEE--------EEEcCCCcccCCCeEEEEc
Q psy8430         290 SWDRVANLFDVE---TGTILQSLTGHDEEPHIL--------CVSSYYSKVSCDLFQRIQH  338 (361)
Q Consensus       290 ~~d~~v~iwd~~---~~~~~~~~~~h~~~v~~~--------~~s~s~~~v~~dg~i~iW~  338 (361)
                      ++|++|++|+-.   .-.|++++.+|++.|.++        +++++     .|++++||.
T Consensus       169 SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~s-----dD~tv~Iw~  223 (312)
T KOG0645|consen  169 SYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCS-----DDGTVSIWR  223 (312)
T ss_pred             ccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEec-----CCcceEeee
Confidence            999999999876   347899999999887774        55666     999999993

>KOG0265|consensus

Probab=99.93  E-value=1.8e-24  Score=176.05  Aligned_cols=183  Identities=25%  Similarity=0.326  Sum_probs=156.0

Q ss_pred             ccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCC-CEEEEEECCCc
Q psy8430         148 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK-DLVLSASGDKS  226 (361)
Q Consensus       148 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~  226 (361)
                      ...++-.-.+++|+++|..+.|.+|++.|+++|.|.+|+.||+++|+++..+++|..-|+++.-+..| .++.+++.||+
T Consensus        77 ~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t  156 (338)
T KOG0265|consen   77 YGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGT  156 (338)
T ss_pred             cccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCce
Confidence            35677788889999999999999999999999999999999999999999999999999998844444 45778999999


Q ss_pred             EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEE
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  306 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~  306 (361)
                      +++||+++..                          +++.+ ...-.++++.|...+..+++|+-|+.|++||++.....
T Consensus       157 ~kl~D~R~k~--------------------------~~~t~-~~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~  209 (338)
T KOG0265|consen  157 LKLWDIRKKE--------------------------AIKTF-ENKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGL  209 (338)
T ss_pred             EEEEeecccc--------------------------hhhcc-ccceeEEEEEecccccceeeccccCceeeeccccCcce
Confidence            9999998663                          22222 34567899999999999999999999999999999999


Q ss_pred             EEeecCCCCCeEEEEEcCCCc---ccCCCeEEEEcCCCCCCCCcceeeeeeccccc
Q psy8430         307 QSLTGHDEEPHILCVSSYYSK---VSCDLFQRIQHLDCGTSENPIHSVCVFQDIQS  359 (361)
Q Consensus       307 ~~~~~h~~~v~~~~~s~s~~~---v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~  359 (361)
                      .++.||..+|+.+..+..+.+   -+.|.++++|  |++-.--...||..|+||..
T Consensus       210 ~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvw--d~rp~~p~~R~v~if~g~~h  263 (338)
T KOG0265|consen  210 YTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVW--DVRPFAPSQRCVKIFQGHIH  263 (338)
T ss_pred             EEeecccCceeeEEeccCCCccccccccceEEEE--EecccCCCCceEEEeecchh
Confidence            999999999999877776443   3689999999  88443344567999999975

>KOG0319|consensus

Probab=99.93  E-value=4.7e-25  Score=198.68  Aligned_cols=151  Identities=26%  Similarity=0.431  Sum_probs=143.1

Q ss_pred             EeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecccc
Q psy8430         156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN  235 (361)
Q Consensus       156 ~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~  235 (361)
                      +...|...|+|++++|+..+|++||.|.+.+||+++.+....++.||...|.||.|+|..+.++|+|.|++|+||.+.+.
T Consensus       458 t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~f  537 (775)
T KOG0319|consen  458 TERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTF  537 (775)
T ss_pred             HHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccc
Confidence            44579999999999999999999999999999999999999999999999999999999999999999999999988765


Q ss_pred             ccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCC
Q psy8430         236 WECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE  315 (361)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~  315 (361)
                                                .+.+++.||...|..+.|-.+|+.|++++.||.+++|++.+++|+.++.+|...
T Consensus       538 --------------------------SClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~Dr  591 (775)
T KOG0319|consen  538 --------------------------SCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDR  591 (775)
T ss_pred             --------------------------eeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhccce
Confidence                                      489999999999999999999999999999999999999999999999999999


Q ss_pred             CeE--------EEEEcCCCcccCCCeEEEE
Q psy8430         316 PHI--------LCVSSYYSKVSCDLFQRIQ  337 (361)
Q Consensus       316 v~~--------~~~s~s~~~v~~dg~i~iW  337 (361)
                      |.+        .++||+     .||.|-+|
T Consensus       592 vWaL~~~~~~~~~~tgg-----~Dg~i~~w  616 (775)
T KOG0319|consen  592 VWALSVSPLLDMFVTGG-----GDGRIIFW  616 (775)
T ss_pred             eEEEeecCccceeEecC-----CCeEEEEe
Confidence            988        566777     99999999

>KOG0284|consensus

Probab=99.93  E-value=9.1e-26  Score=190.42  Aligned_cols=156  Identities=26%  Similarity=0.404  Sum_probs=142.6

Q ss_pred             eEEeeccC-CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430         154 IRSFSGHR-DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       154 ~~~l~~h~-~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~  232 (361)
                      ++.+++|. ..|.+++|+|+...|+++|.||+|+|||....+....+.+|.--|.++.|+|...++++++.|..|++||.
T Consensus       172 Vk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDp  251 (464)
T KOG0284|consen  172 VKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDP  251 (464)
T ss_pred             hHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecC
Confidence            33444555 99999999999999999999999999999988888889999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecC
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH  312 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h  312 (361)
                      +++                          .++.++.+|+..|.++.|+|++++|+++|.|..++++|+++.+-++++.+|
T Consensus       252 rSg--------------------------~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~H  305 (464)
T KOG0284|consen  252 RSG--------------------------SCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGH  305 (464)
T ss_pred             CCc--------------------------chhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcc
Confidence            988                          478889999999999999999999999999999999999999999999999


Q ss_pred             CCCCeE---------EEEEcCCCcccCCCeEEEEcCC
Q psy8430         313 DEEPHI---------LCVSSYYSKVSCDLFQRIQHLD  340 (361)
Q Consensus       313 ~~~v~~---------~~~s~s~~~v~~dg~i~iW~~d  340 (361)
                      ...+.+         ++.+++     .||.|..|.++
T Consensus       306 kkdv~~~~WhP~~~~lftsgg-----~Dgsvvh~~v~  337 (464)
T KOG0284|consen  306 KKDVTSLTWHPLNESLFTSGG-----SDGSVVHWVVG  337 (464)
T ss_pred             hhhheeeccccccccceeecc-----CCCceEEEecc
Confidence            998888         677777     99999999444

>KOG0277|consensus

Probab=99.93  E-value=5.4e-25  Score=175.13  Aligned_cols=189  Identities=22%  Similarity=0.345  Sum_probs=155.9

Q ss_pred             eccceeEEeeecCccceeeeEEeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec
Q psy8430         135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP  213 (361)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~  213 (361)
                      ...+..++.|. ......+++.++.|...|.++.|++ .+..++++|-|++|++|+..-++.+.+|.+|..-|...+|+|
T Consensus        79 a~GDGSLrl~d-~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp  157 (311)
T KOG0277|consen   79 ASGDGSLRLFD-LTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSP  157 (311)
T ss_pred             EecCceEEEec-cCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCC
Confidence            33444455555 4455668999999999999999999 566888889999999999999999999999999999999999


Q ss_pred             -CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeC
Q psy8430         214 -NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASW  291 (361)
Q Consensus       214 -~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~  291 (361)
                       .+++|+++|.|+++++||++...                          ....+..|...+.++.|+. +...++||+.
T Consensus       158 ~~~nlfas~Sgd~~l~lwdvr~~g--------------------------k~~~i~ah~~Eil~cdw~ky~~~vl~Tg~v  211 (311)
T KOG0277|consen  158 HIPNLFASASGDGTLRLWDVRSPG--------------------------KFMSIEAHNSEILCCDWSKYNHNVLATGGV  211 (311)
T ss_pred             CCCCeEEEccCCceEEEEEecCCC--------------------------ceeEEEeccceeEeecccccCCcEEEecCC
Confidence             67899999999999999987542                          2233778999999999987 6678899999


Q ss_pred             CCcEEEeeCCCC-eEEEEeecCCCCCeE---------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430         292 DRVANLFDVETG-TILQSLTGHDEEPHI---------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST  360 (361)
Q Consensus       292 d~~v~iwd~~~~-~~~~~~~~h~~~v~~---------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~  360 (361)
                      |+.|++||+++. .++..+.+|.-.|..         +++|++     +|-++|||  |.   ..+..++.+..-|+..
T Consensus       212 d~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSas-----YDmT~riw--~~---~~~ds~~e~~~~HtEF  280 (311)
T KOG0277|consen  212 DNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASAS-----YDMTVRIW--DP---ERQDSAIETVDHHTEF  280 (311)
T ss_pred             CceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhcc-----ccceEEec--cc---ccchhhhhhhhccceE
Confidence            999999999964 567788888888777         677777     99999999  77   4444566666667654

>KOG0281|consensus

Probab=99.92  E-value=4.7e-26  Score=188.67  Aligned_cols=176  Identities=22%  Similarity=0.351  Sum_probs=151.5

Q ss_pred             cCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe---EEEEEeCCCCCeEEEEEecCCCEEEEEE
Q psy8430         146 TSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK---CVLQYSGHSGSVNSVRFLPNKDLVLSAS  222 (361)
Q Consensus       146 ~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~---~~~~~~~h~~~v~~v~~~~~~~~l~s~~  222 (361)
                      |+-.+++++.++-+|...|..+.|+.  .+++++|.|.+|.+||+....   +.+.+.||...|+.+.|+  .+++++++
T Consensus       262 WDv~tge~l~tlihHceaVLhlrf~n--g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsAS  337 (499)
T KOG0281|consen  262 WDVNTGEPLNTLIHHCEAVLHLRFSN--GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSAS  337 (499)
T ss_pred             EeccCCchhhHHhhhcceeEEEEEeC--CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEec
Confidence            34478899999999999999999984  499999999999999997653   345577999999999994  66999999


Q ss_pred             CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC
Q psy8430         223 GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET  302 (361)
Q Consensus       223 ~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~  302 (361)
                      .|.+|++|++.++                          .++..+.+|...|-++.+  .|+++++|+.|.+|++||+..
T Consensus       338 gDRTikvW~~st~--------------------------efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~  389 (499)
T KOG0281|consen  338 GDRTIKVWSTSTC--------------------------EFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIEC  389 (499)
T ss_pred             CCceEEEEeccce--------------------------eeehhhhcccccceehhc--cCeEEEecCCCceEEEEeccc
Confidence            9999999998776                          378889999999999988  799999999999999999999


Q ss_pred             CeEEEEeecCCCCCeE------EEEEcCCCcccCCCeEEEEcCCCCCCCCc-----ceeeeeecccccC
Q psy8430         303 GTILQSLTGHDEEPHI------LCVSSYYSKVSCDLFQRIQHLDCGTSENP-----IHSVCVFQDIQST  360 (361)
Q Consensus       303 ~~~~~~~~~h~~~v~~------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~-----~~~v~~~~~h~~~  360 (361)
                      |.|++.+.||..-|.+      .++||.     +||+|+||  |+.++-.|     .-|+..+..|++-
T Consensus       390 G~cLRvLeGHEeLvRciRFd~krIVSGa-----YDGkikvW--dl~aaldpra~~~~~Cl~~lv~hsgR  451 (499)
T KOG0281|consen  390 GACLRVLEGHEELVRCIRFDNKRIVSGA-----YDGKIKVW--DLQAALDPRAPASTLCLRTLVEHSGR  451 (499)
T ss_pred             cHHHHHHhchHHhhhheeecCceeeecc-----ccceEEEE--ecccccCCcccccchHHHhhhhccce
Confidence            9999999999999988      688999     99999999  66554333     2366777777753

>KOG0265|consensus

Probab=99.92  E-value=1.9e-24  Score=175.83  Aligned_cols=172  Identities=21%  Similarity=0.321  Sum_probs=145.1

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC-CCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEE
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ-TGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  230 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~-~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lw  230 (361)
                      .++..+.||.+.|+.+.|+|+|..|+|||.|..|.+|++. ..+...++++|.++|..+.|.+++..+++++.|++++.|
T Consensus        38 ap~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~w  117 (338)
T KOG0265|consen   38 APIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGW  117 (338)
T ss_pred             chhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEE
Confidence            3455677999999999999999999999999999999964 335667788999999999999999999999999999999


Q ss_pred             eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCE-EEEEeCCCcEEEeeCCCCeEEEEe
Q psy8430         231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQ-VITASWDRVANLFDVETGTILQSL  309 (361)
Q Consensus       231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~d~~v~iwd~~~~~~~~~~  309 (361)
                      |..++                          +..+.+.+|...|+++..+.-|.. +.+++.|+++++||+++..+++++
T Consensus       118 D~~tG--------------------------~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~  171 (338)
T KOG0265|consen  118 DAETG--------------------------KRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTF  171 (338)
T ss_pred             ecccc--------------------------eeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhcc
Confidence            99887                          467888999999999986665655 556888999999999988888777


Q ss_pred             ecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         310 TGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       310 ~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      .. .-.+++        -+++|.     =|+.|++|  |+   |+ .....++.||.++|
T Consensus       172 ~~-kyqltAv~f~d~s~qv~sgg-----Idn~ikvW--d~---r~-~d~~~~lsGh~DtI  219 (338)
T KOG0265|consen  172 EN-KYQLTAVGFKDTSDQVISGG-----IDNDIKVW--DL---RK-NDGLYTLSGHADTI  219 (338)
T ss_pred             cc-ceeEEEEEecccccceeecc-----ccCceeee--cc---cc-CcceEEeecccCce
Confidence            42 222333        456677     89999999  99   77 67789999999876

>KOG0274|consensus

Probab=99.92  E-value=5.5e-24  Score=196.37  Aligned_cols=181  Identities=29%  Similarity=0.416  Sum_probs=156.6

Q ss_pred             cCccceeeeEE-eeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECC
Q psy8430         146 TSLLSCYKIRS-FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD  224 (361)
Q Consensus       146 ~~~~~~~~~~~-l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d  224 (361)
                      ++...+..+.. +.||.+.|+++++...+.+|++|+.|.++++||..+|.+..++.+|.+.|.++...  +..+++|+.|
T Consensus       233 ~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~--~~~~~sgs~D  310 (537)
T KOG0274|consen  233 WDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTID--PFLLVSGSRD  310 (537)
T ss_pred             eecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEcc--CceEeeccCC
Confidence            34456677777 99999999999999878899999999999999999999999999999999999874  5578889999


Q ss_pred             CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCe
Q psy8430         225 KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT  304 (361)
Q Consensus       225 ~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~  304 (361)
                      .+|++|++.++                          ..+..+.+|.++|.++.++  +.++++|+.|++|.+||+.+++
T Consensus       311 ~tVkVW~v~n~--------------------------~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~  362 (537)
T KOG0274|consen  311 NTVKVWDVTNG--------------------------ACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGK  362 (537)
T ss_pred             ceEEEEeccCc--------------------------ceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhce
Confidence            99999999766                          3677777899999999995  8999999999999999999999


Q ss_pred             EEEEeecCCCCCeEEEEEc-C-CCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         305 ILQSLTGHDEEPHILCVSS-Y-YSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       305 ~~~~~~~h~~~v~~~~~s~-s-~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      ++.++.+|++.|+++++.+ . ..+.+.|+.|++|  |+   +.+.+|+.+|++|++-|
T Consensus       363 cl~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~IkvW--dl---~~~~~c~~tl~~h~~~v  416 (537)
T KOG0274|consen  363 CLKSLSGHTGRVYSLIVDSENRLLSGSLDTTIKVW--DL---RTKRKCIHTLQGHTSLV  416 (537)
T ss_pred             eeeeecCCcceEEEEEecCcceEEeeeeccceEee--cC---CchhhhhhhhcCCcccc
Confidence            9999999999999955444 2 1123499999999  88   44228999999998753

>KOG0282|consensus

Probab=99.92  E-value=4.5e-25  Score=189.98  Aligned_cols=182  Identities=24%  Similarity=0.355  Sum_probs=144.2

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCC-CEEEEEECCCcEE
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK-DLVLSASGDKSVH  228 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~i~  228 (361)
                      .+.+++++.||..+|.+++|+.+|..|+|+|.|+.|++||+++|+++..+. ....+.|+.|+|++ +.|++|+.|+.|+
T Consensus       247 ~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~  325 (503)
T KOG0282|consen  247 DRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIR  325 (503)
T ss_pred             CcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEE
Confidence            578999999999999999999999999999999999999999999999987 67889999999988 7899999999999


Q ss_pred             EEeccccccccCCCC-------------------CCCCCC--------------------------CCCCCCCceec---
Q psy8430         229 IWQAVINWECLNNDN-------------------DSDLDE--------------------------SKEPDESSITL---  260 (361)
Q Consensus       229 lwd~~~~~~~~~~~~-------------------~~~~~~--------------------------~~~~~~~~~~~---  260 (361)
                      .||+++++-+.....                   .++...                          ...+.......   
T Consensus       326 ~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~  405 (503)
T KOG0282|consen  326 QWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSM  405 (503)
T ss_pred             EEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhcc
Confidence            999998865432110                   000000                          00000000000   


Q ss_pred             --------------ccccEEEeCCC--CcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE------
Q psy8430         261 --------------RTPVKELLGHS--NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI------  318 (361)
Q Consensus       261 --------------~~~~~~~~~~~--~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~------  318 (361)
                                    ....+.+.||.  +....+.|||||.+|++|+.||.+.+||.++-+.+..+++|++.+..      
T Consensus       406 dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~  485 (503)
T KOG0282|consen  406 DNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPV  485 (503)
T ss_pred             CceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCC
Confidence                          01123445664  45667899999999999999999999999999999999999887776      


Q ss_pred             ---EEEEcCCCcccCCCeEEEE
Q psy8430         319 ---LCVSSYYSKVSCDLFQRIQ  337 (361)
Q Consensus       319 ---~~~s~s~~~v~~dg~i~iW  337 (361)
                         .++|++     .||.|++|
T Consensus       486 e~Skvat~~-----w~G~Ikiw  502 (503)
T KOG0282|consen  486 EPSKVATCG-----WDGLIKIW  502 (503)
T ss_pred             CcceeEecc-----cCceeEec
Confidence               788999     99999999

>KOG0316|consensus

Probab=99.92  E-value=4.5e-24  Score=168.17  Aligned_cols=215  Identities=24%  Similarity=0.301  Sum_probs=162.2

Q ss_pred             eeeeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEE
Q psy8430         131 NKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR  210 (361)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~  210 (361)
                      +.+....++.++.|.+  .++.+++++.||...|..++.+.|...|++|+.|..+.+||+.+|+.++.|.+|.+.|+.|+
T Consensus        31 Y~ltcGsdrtvrLWNp--~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~  108 (307)
T KOG0316|consen   31 YCLTCGSDRTVRLWNP--LRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVR  108 (307)
T ss_pred             EEEEcCCCceEEeecc--cccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeecccccceeeEEE
Confidence            3444455556655554  57788999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCC------------CCCCc--eecccccEEEeCCCCcEEE
Q psy8430         211 FLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKE------------PDESS--ITLRTPVKELLGHSNVVIA  276 (361)
Q Consensus       211 ~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~------------~~~~~--~~~~~~~~~~~~~~~~v~~  276 (361)
                      |+.+...+++|+.|.++++||-++....+-.......+....            .+...  ...+.-......-..+|++
T Consensus       109 fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~heIvaGS~DGtvRtydiR~G~l~sDy~g~pit~  188 (307)
T KOG0316|consen  109 FNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAEHEIVAGSVDGTVRTYDIRKGTLSSDYFGHPITS  188 (307)
T ss_pred             ecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEecccEEEeeccCCcEEEEEeecceeehhhcCCccee
Confidence            999999999999999999999987654332222111111000            00000  0000000111123568999


Q ss_pred             EEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE----------EEEEcCCCcccCCCeEEEEcCCCCCCCC
Q psy8430         277 ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI----------LCVSSYYSKVSCDLFQRIQHLDCGTSEN  346 (361)
Q Consensus       277 ~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~----------~~~s~s~~~v~~dg~i~iW~~d~~~~~~  346 (361)
                      ++|+++++..+.++.|+++++.|-.+|+.++.+++|.+.-+.          .+++|+     .||.|.+|  |+   -.
T Consensus       189 vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgS-----EDG~Vy~w--dL---vd  258 (307)
T KOG0316|consen  189 VSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGS-----EDGKVYFW--DL---VD  258 (307)
T ss_pred             EEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccceeEEecc-----CCceEEEE--Ee---cc
Confidence            999999999999999999999999999999999999765433          788999     99999999  77   22


Q ss_pred             cceeeeeecccc
Q psy8430         347 PIHSVCVFQDIQ  358 (361)
Q Consensus       347 ~~~~v~~~~~h~  358 (361)
                       ...+..|..|.
T Consensus       259 -~~~~sk~~~~~  269 (307)
T KOG0316|consen  259 -ETQISKLSVVS  269 (307)
T ss_pred             -ceeeeeeccCC
Confidence             34455555444

>KOG0276|consensus

Probab=99.92  E-value=1.8e-24  Score=191.55  Aligned_cols=188  Identities=19%  Similarity=0.276  Sum_probs=169.0

Q ss_pred             ccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCC
Q psy8430         136 QTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK  215 (361)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~  215 (361)
                      .-+.-+++|..  .+..+++.+.-..-+|.+..|-+-.+++++|+.|..|++|+..+++.+.+|..|.+.|.|++.+|..
T Consensus        32 LynG~V~IWny--etqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~  109 (794)
T KOG0276|consen   32 LYNGDVQIWNY--ETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTL  109 (794)
T ss_pred             eecCeeEEEec--ccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecccceeeEEeeccccceeeeeecCCC
Confidence            33444445544  4557788888888999999999999999999999999999999999999999999999999999999


Q ss_pred             CEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCc
Q psy8430         216 DLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRV  294 (361)
Q Consensus       216 ~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~  294 (361)
                      .+++|+|.|-+|++||....+                         .+...+.||...|.+++|+| |.+.+++++-|++
T Consensus       110 P~vLtsSDDm~iKlW~we~~w-------------------------a~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrT  164 (794)
T KOG0276|consen  110 PYVLTSSDDMTIKLWDWENEW-------------------------ACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRT  164 (794)
T ss_pred             CeEEecCCccEEEEeeccCce-------------------------eeeeEEcCcceEEEEEEecCCCccceeeeecccc
Confidence            999999999999999987664                         47889999999999999999 6789999999999


Q ss_pred             EEEeeCCCCeEEEEeecCCCCCeE----------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         295 ANLFDVETGTILQSLTGHDEEPHI----------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       295 v~iwd~~~~~~~~~~~~h~~~v~~----------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      |+||.+.+..+..++.+|...|.+          +++||+     .|.+|+||  |.   .. ..||++|.||+..|
T Consensus       165 VKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsga-----DD~tiKvW--Dy---Qt-k~CV~TLeGHt~Nv  230 (794)
T KOG0276|consen  165 VKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGA-----DDLTIKVW--DY---QT-KSCVQTLEGHTNNV  230 (794)
T ss_pred             EEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecC-----CCceEEEe--ec---ch-HHHHHHhhcccccc
Confidence            999999999999999999999998          777888     99999999  98   55 78999999999765

>KOG0292|consensus

Probab=99.92  E-value=3.4e-24  Score=196.59  Aligned_cols=192  Identities=24%  Similarity=0.382  Sum_probs=162.1

Q ss_pred             eeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEe
Q psy8430         133 LKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL  212 (361)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~  212 (361)
                      +.++.+.+++.|+.  .-+.++..|.+|.|+|..++|+|.+.+|+|||.|..|++|+..+.+++.++.||.+.|..+.|+
T Consensus        25 LtslHsG~IQlWDY--RM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FH  102 (1202)
T KOG0292|consen   25 LTSLHSGVIQLWDY--RMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFH  102 (1202)
T ss_pred             EEeecCceeeeehh--hhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhccccceeEEeecc
Confidence            34455555655544  5567899999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy8430         213 PNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD  292 (361)
Q Consensus       213 ~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d  292 (361)
                      +...+++|+|.|.+|+||+..+.                          .++..+.||...|.+..|+|....++++|-|
T Consensus       103 heyPWIlSASDDQTIrIWNwqsr--------------------------~~iavltGHnHYVMcAqFhptEDlIVSaSLD  156 (1202)
T KOG0292|consen  103 HEYPWILSASDDQTIRIWNWQSR--------------------------KCIAVLTGHNHYVMCAQFHPTEDLIVSASLD  156 (1202)
T ss_pred             CCCceEEEccCCCeEEEEeccCC--------------------------ceEEEEecCceEEEeeccCCccceEEEeccc
Confidence            99999999999999999986554                          6899999999999999999999999999999


Q ss_pred             CcEEEeeCCC--------C-------------------e--EEEEeecCCCCCeE--------EEEEcCCCcccCCCeEE
Q psy8430         293 RVANLFDVET--------G-------------------T--ILQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQR  335 (361)
Q Consensus       293 ~~v~iwd~~~--------~-------------------~--~~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~  335 (361)
                      .+|+|||+.-        +                   .  ..+.+.||.-.|.-        +++||+     .|..|+
T Consensus       157 QTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~-----DDRqVK  231 (1202)
T KOG0292|consen  157 QTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGA-----DDRQVK  231 (1202)
T ss_pred             ceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecC-----Ccceee
Confidence            9999999852        1                   0  12456678776665        888898     999999


Q ss_pred             EEcCCCCCCCCcceeeeeecccccCC
Q psy8430         336 IQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       336 iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      +|.|+-    .+.=.|-+..||..+|
T Consensus       232 lWrmne----tKaWEvDtcrgH~nnV  253 (1202)
T KOG0292|consen  232 LWRMNE----TKAWEVDTCRGHYNNV  253 (1202)
T ss_pred             EEEecc----ccceeehhhhcccCCc
Confidence            995554    2234577788887765

>KOG0319|consensus

Probab=99.92  E-value=1.7e-24  Score=195.01  Aligned_cols=173  Identities=22%  Similarity=0.298  Sum_probs=150.5

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCe-----EEE----EEeCCCCCeEEEEEecCCCEEEEE
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGK-----CVL----QYSGHSGSVNSVRFLPNKDLVLSA  221 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~-----~~~----~~~~h~~~v~~v~~~~~~~~l~s~  221 (361)
                      -++....||.+.|.+++++..+. +|+++|.|+++++|++...+     .+.    +-..|+..|+||+.+|+..+++||
T Consensus       402 ~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~  481 (775)
T KOG0319|consen  402 LCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATG  481 (775)
T ss_pred             hhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEec
Confidence            45666789999999999977554 99999999999999997521     111    224699999999999999999999


Q ss_pred             ECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCC
Q psy8430         222 SGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  301 (361)
Q Consensus       222 ~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~  301 (361)
                      |.|++.+||++...                          .....+.||...|+++.|+|..+.++|+|.|++|+||.+.
T Consensus       482 SqDktaKiW~le~~--------------------------~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is  535 (775)
T KOG0319|consen  482 SQDKTAKIWDLEQL--------------------------RLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSIS  535 (775)
T ss_pred             ccccceeeecccCc--------------------------eEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEec
Confidence            99999999998633                          3678999999999999999999999999999999999999


Q ss_pred             CCeEEEEeecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         302 TGTILQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       302 ~~~~~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      +..|++++.||+..|..        .++|++     .||-++||  ++   .+ ..|++++-+|.+.|
T Consensus       536 ~fSClkT~eGH~~aVlra~F~~~~~qliS~~-----adGliKlW--ni---kt-~eC~~tlD~H~Drv  592 (775)
T KOG0319|consen  536 TFSCLKTFEGHTSAVLRASFIRNGKQLISAG-----ADGLIKLW--NI---KT-NECEMTLDAHNDRV  592 (775)
T ss_pred             cceeeeeecCccceeEeeeeeeCCcEEEecc-----CCCcEEEE--ec---cc-hhhhhhhhhcccee
Confidence            99999999999998877        677777     99999999  77   44 67899999998754

>KOG0291|consensus

Probab=99.92  E-value=2.4e-23  Score=188.19  Aligned_cols=156  Identities=25%  Similarity=0.404  Sum_probs=138.6

Q ss_pred             eeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430         153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       153 ~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~  232 (361)
                      .+-..+||...+++++++|||.++++|+.||.|++||..+|-|..+|..|+..|+.+.|+..++.++++|.||+|+.||+
T Consensus       342 YVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDl  421 (893)
T KOG0291|consen  342 YVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDL  421 (893)
T ss_pred             eeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeee
Confidence            34556799999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCC-CcEEEEEEcCCCCEEEEEeCCCc-EEEeeCCCCeEEEEee
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHS-NVVIAADWLSDGEQVITASWDRV-ANLFDVETGTILQSLT  310 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~d~~-v~iwd~~~~~~~~~~~  310 (361)
                      ...                          +..+++.... -...+++..|.|..+++|+.|.. |.+|++.||+.+-.+.
T Consensus       422 kRY--------------------------rNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLs  475 (893)
T KOG0291|consen  422 KRY--------------------------RNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILS  475 (893)
T ss_pred             ccc--------------------------ceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhc
Confidence            654                          2344444332 35678899999999999999876 9999999999999999


Q ss_pred             cCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         311 GHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       311 ~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      ||.++|.+        .++|+|     +|.+||+|  |+
T Consensus       476 GHEgPVs~l~f~~~~~~LaS~S-----WDkTVRiW--~i  507 (893)
T KOG0291|consen  476 GHEGPVSGLSFSPDGSLLASGS-----WDKTVRIW--DI  507 (893)
T ss_pred             CCCCcceeeEEccccCeEEecc-----ccceEEEE--Ee
Confidence            99999997        677777     99999999  76

>KOG0316|consensus

Probab=99.92  E-value=6.4e-24  Score=167.32  Aligned_cols=159  Identities=22%  Similarity=0.303  Sum_probs=145.3

Q ss_pred             eeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430         153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       153 ~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~  232 (361)
                      ..+.+..|+++|..+.|+-+|++.++++.|++|++|+...|.+++++.+|...|..++.+.+...|++|+.|+.+.+||+
T Consensus         9 r~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV   88 (307)
T KOG0316|consen    9 RLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDV   88 (307)
T ss_pred             hceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEc
Confidence            45677899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC--CeEEEEee
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET--GTILQSLT  310 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~--~~~~~~~~  310 (361)
                      .++                          +..+.+.+|.+.|+.+.|+.+...+++|+.|.++++||.++  -++++.+.
T Consensus        89 ~TG--------------------------kv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQild  142 (307)
T KOG0316|consen   89 NTG--------------------------KVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILD  142 (307)
T ss_pred             ccC--------------------------eeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhh
Confidence            988                          36788999999999999999999999999999999999885  47788887


Q ss_pred             cCCCCCeE------EEEEcCCCcccCCCeEEEEcCCCCCC
Q psy8430         311 GHDEEPHI------LCVSSYYSKVSCDLFQRIQHLDCGTS  344 (361)
Q Consensus       311 ~h~~~v~~------~~~s~s~~~v~~dg~i~iW~~d~~~~  344 (361)
                      .....|.+      .+++|+     .||++|.|  |++.|
T Consensus       143 ea~D~V~Si~v~~heIvaGS-----~DGtvRty--diR~G  175 (307)
T KOG0316|consen  143 EAKDGVSSIDVAEHEIVAGS-----VDGTVRTY--DIRKG  175 (307)
T ss_pred             hhcCceeEEEecccEEEeec-----cCCcEEEE--Eeecc
Confidence            77777777      567788     99999999  88544

>KOG0296|consensus

Probab=99.92  E-value=3.4e-23  Score=172.70  Aligned_cols=142  Identities=20%  Similarity=0.344  Sum_probs=129.5

Q ss_pred             eeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE
Q psy8430         143 SFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS  222 (361)
Q Consensus       143 ~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~  222 (361)
                      .|.|+..++.....+.+|+..|+++.|+.+|.+||+|+.+|.|+||...++.....+......+.-+.|+|.+..|+.|+
T Consensus        88 AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~  167 (399)
T KOG0296|consen   88 AFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGS  167 (399)
T ss_pred             EEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeec
Confidence            46666677778899999999999999999999999999999999999999988888877778899999999999999999


Q ss_pred             CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC
Q psy8430         223 GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET  302 (361)
Q Consensus       223 ~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~  302 (361)
                      .||.+.+|.+.+.                          ...+.+.||..++++-.|.|+|+.++++..||+|++||..+
T Consensus       168 ~DGsvWmw~ip~~--------------------------~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~kt  221 (399)
T KOG0296|consen  168 TDGSVWMWQIPSQ--------------------------ALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKT  221 (399)
T ss_pred             CCCcEEEEECCCc--------------------------ceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCC
Confidence            9999999998753                          25678899999999999999999999999999999999999


Q ss_pred             CeEEEEee
Q psy8430         303 GTILQSLT  310 (361)
Q Consensus       303 ~~~~~~~~  310 (361)
                      ++++..+.
T Consensus       222 g~p~~~~~  229 (399)
T KOG0296|consen  222 GQPLHKIT  229 (399)
T ss_pred             CceeEEec
Confidence            99887776

>KOG0274|consensus

Probab=99.91  E-value=2.2e-23  Score=192.47  Aligned_cols=171  Identities=26%  Similarity=0.391  Sum_probs=153.6

Q ss_pred             ccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcE
Q psy8430         148 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSV  227 (361)
Q Consensus       148 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i  227 (361)
                      ..++++.+.+.||.+.|.++...+.  ++++||.|.+|++|++.++.++..+.+|.++|+++..+  +.++++|+.|++|
T Consensus       278 ~~sg~C~~~l~gh~stv~~~~~~~~--~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v  353 (537)
T KOG0274|consen  278 CSTGECTHSLQGHTSSVRCLTIDPF--LLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTV  353 (537)
T ss_pred             cCCCcEEEEecCCCceEEEEEccCc--eEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceE
Confidence            5788999999999999999988754  88889999999999999999999999999999999996  8899999999999


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC-eEE
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG-TIL  306 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~-~~~  306 (361)
                      ++||+.++                          ++++.+.+|...|+++.+.+. .++++|+.|++|++||++++ +|+
T Consensus       354 ~VW~~~~~--------------------------~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~  406 (537)
T KOG0274|consen  354 KVWDPRTG--------------------------KCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCI  406 (537)
T ss_pred             EEEEhhhc--------------------------eeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhh
Confidence            99998765                          488999999999999988544 89999999999999999999 999


Q ss_pred             EEeecCCCCCeE------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecc-cccC
Q psy8430         307 QSLTGHDEEPHI------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQD-IQST  360 (361)
Q Consensus       307 ~~~~~h~~~v~~------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~-h~~~  360 (361)
                      .++.+|...+..      ++.+++     .||.|++|  |.   .. ..++.++.+ |.+.
T Consensus       407 ~tl~~h~~~v~~l~~~~~~Lvs~~-----aD~~Ik~W--D~---~~-~~~~~~~~~~~~~~  456 (537)
T KOG0274|consen  407 HTLQGHTSLVSSLLLRDNFLVSSS-----ADGTIKLW--DA---EE-GECLRTLEGRHVGG  456 (537)
T ss_pred             hhhcCCcccccccccccceeEecc-----ccccEEEe--ec---cc-CceeeeeccCCccc
Confidence            999999998876      778888     99999999  87   33 677888888 5443

>KOG0282|consensus

Probab=99.91  E-value=5.7e-25  Score=189.37  Aligned_cols=163  Identities=21%  Similarity=0.291  Sum_probs=141.0

Q ss_pred             eeeEEeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCC-CeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEE
Q psy8430         152 YKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI  229 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~-~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~l  229 (361)
                      +.++++.||+..|+++.|.| .+.+|++||.|+.|+||++.. ++++++|.+|..+|.+++|+++|..|+|++.|+.+++
T Consensus       205 k~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKl  284 (503)
T KOG0282|consen  205 KLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKL  284 (503)
T ss_pred             hheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeee
Confidence            57889999999999999999 899999999999999999976 8999999999999999999999999999999999999


Q ss_pred             EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEeeCCCCeEEEE
Q psy8430         230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG-EQVITASWDRVANLFDVETGTILQS  308 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~  308 (361)
                      ||+.+|.                          +...+. -...++++.|+|++ +.+++|+.|+.|+.||+++++.++.
T Consensus       285 wDtETG~--------------------------~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqe  337 (503)
T KOG0282|consen  285 WDTETGQ--------------------------VLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQE  337 (503)
T ss_pred             eccccce--------------------------EEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHH
Confidence            9999883                          344443 34578899999988 8899999999999999999999999


Q ss_pred             eecCCCCCeEEEEEcC---CCcccCCCeEEEEcCCC
Q psy8430         309 LTGHDEEPHILCVSSY---YSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       309 ~~~h~~~v~~~~~s~s---~~~v~~dg~i~iW~~d~  341 (361)
                      +..|-+.|..+.+-..   |++-+.|++++||+++.
T Consensus       338 Yd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~  373 (503)
T KOG0282|consen  338 YDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRI  373 (503)
T ss_pred             HHhhhhheeeeEEccCCceEeeeccCccEEEEEcCC
Confidence            9999998888433322   22334999999994433

>KOG0293|consensus

Probab=99.91  E-value=7.2e-23  Score=173.32  Aligned_cols=200  Identities=19%  Similarity=0.224  Sum_probs=151.9

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe-CCCCCeEEEEEecCCCEEEEEECCCcEEE
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNKDLVLSASGDKSVHI  229 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d~~i~l  229 (361)
                      .++.+++.||..+|.-+.|+||.++|++|+.|..+.+||+.+|.+...+. +|...+.+++|.|||..+++|+.|++|..
T Consensus       259 ~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~  338 (519)
T KOG0293|consen  259 FKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIM  338 (519)
T ss_pred             eeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEE
Confidence            57899999999999999999999999999999999999999999888776 45689999999999999999999999999


Q ss_pred             EeccccccccCCCCC-CCCCC-CCCCCCCce------------eccccc-EEEeCCCCcEEEEEEcCCCCEEEEEeCCCc
Q psy8430         230 WQAVINWECLNNDND-SDLDE-SKEPDESSI------------TLRTPV-KELLGHSNVVIAADWLSDGEQVITASWDRV  294 (361)
Q Consensus       230 wd~~~~~~~~~~~~~-~~~~~-~~~~~~~~~------------~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~  294 (361)
                      ||+.....-...... ...-+ ....++...            .....+ ..+..-..++++.+.|.+|+++++.-.+..
T Consensus       339 wdlDgn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qe  418 (519)
T KOG0293|consen  339 WDLDGNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQE  418 (519)
T ss_pred             ecCCcchhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCe
Confidence            998754221110000 00000 000000000            000000 112234568999999999999999999999


Q ss_pred             EEEeeCCCCeEEEEeecCCCCCeE-----------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         295 ANLFDVETGTILQSLTGHDEEPHI-----------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       295 v~iwd~~~~~~~~~~~~h~~~v~~-----------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      +++||++....++.+.||...-..           +++|||     .|+.|+||  +.   +. +.++.++.||..+|
T Consensus       419 i~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGS-----ED~kvyIW--hr---~s-gkll~~LsGHs~~v  485 (519)
T KOG0293|consen  419 IHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGS-----EDSKVYIW--HR---IS-GKLLAVLSGHSKTV  485 (519)
T ss_pred             eEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecC-----CCceEEEE--Ec---cC-CceeEeecCCccee
Confidence            999999988888888888755332           888888     99999999  76   33 78899999998765

>KOG0269|consensus

Probab=99.91  E-value=3.3e-24  Score=194.17  Aligned_cols=194  Identities=17%  Similarity=0.260  Sum_probs=160.0

Q ss_pred             eeccceeEEeeecCc-cceeeeEEeeccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEE
Q psy8430         134 KVQTSKIVSSFKTSL-LSCYKIRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF  211 (361)
Q Consensus       134 ~~~~~~~~~~~~~~~-~~~~~~~~l~~h~~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~  211 (361)
                      ...+...+.+|.-.. .+.+.+..|..|...|++++|++. .++|++||.||+|++||++..+...++.+....|.+|+|
T Consensus       105 T~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~f  184 (839)
T KOG0269|consen  105 TCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKF  184 (839)
T ss_pred             eecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceee
Confidence            345556666666544 456777889999999999999994 559999999999999999999989999999999999999


Q ss_pred             ec-CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe
Q psy8430         212 LP-NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS  290 (361)
Q Consensus       212 ~~-~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~  290 (361)
                      +| .+..|+++...|.+.+||++...                         ++...+.+|.++|.++.|+|++.+|+||+
T Consensus       185 sp~~~~~F~s~~dsG~lqlWDlRqp~-------------------------r~~~k~~AH~GpV~c~nwhPnr~~lATGG  239 (839)
T KOG0269|consen  185 SPGYGNKFASIHDSGYLQLWDLRQPD-------------------------RCEKKLTAHNGPVLCLNWHPNREWLATGG  239 (839)
T ss_pred             ccCCCceEEEecCCceEEEeeccCch-------------------------hHHHHhhcccCceEEEeecCCCceeeecC
Confidence            99 56789999999999999998653                         47888899999999999999999999999


Q ss_pred             CCCcEEEeeCCCCeEEEEeecCC-CCCeE---------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430         291 WDRVANLFDVETGTILQSLTGHD-EEPHI---------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST  360 (361)
Q Consensus       291 ~d~~v~iwd~~~~~~~~~~~~h~-~~v~~---------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~  360 (361)
                      .|+.|+|||+.+++.-.....++ .++..         .+++++   .+.|-.|+||  |+   |.|.-+..+|.-|++.
T Consensus       240 RDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcs---mv~dtsV~VW--Dv---rRPYIP~~t~~eH~~~  311 (839)
T KOG0269|consen  240 RDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCS---MVVDTSVHVW--DV---RRPYIPYATFLEHTDS  311 (839)
T ss_pred             CCccEEEEeccCCCccceeEEeecceeeeeeeccCccchhhhhh---ccccceEEEE--ee---ccccccceeeeccCcc
Confidence            99999999998765443333333 23333         344444   4579999999  99   9999999999999874

>KOG0308|consensus

Probab=99.91  E-value=3.7e-24  Score=190.40  Aligned_cols=207  Identities=20%  Similarity=0.264  Sum_probs=171.3

Q ss_pred             eeeeeccceeEEeeecCcccee----eeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--eEEEEEeCCCC
Q psy8430         131 NKLKVQTSKIVSSFKTSLLSCY----KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSG  204 (361)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~--~~~~~~~~h~~  204 (361)
                      +-+.+..+.++..|.......+    .+..++.|..+|+++....+|+.|+|+|.|-+|++|+...+  -+..++..|.+
T Consensus        39 yLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~H~D  118 (735)
T KOG0308|consen   39 YLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIRTHKD  118 (735)
T ss_pred             eEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhhcccc
Confidence            5778888888888887665443    57889999999999999999999999999999999999877  67788889999


Q ss_pred             CeEEEEE-ecCCCEEEEEECCCcEEEEecccccc--ccCCCCCCCCCCCCCCCCCceecccccEEEe-CCCCcEEEEEEc
Q psy8430         205 SVNSVRF-LPNKDLVLSASGDKSVHIWQAVINWE--CLNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWL  280 (361)
Q Consensus       205 ~v~~v~~-~~~~~~l~s~~~d~~i~lwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~  280 (361)
                      .|.|+++ .++..++|+|+.|+.|.+||+.++..  +..+..                  .+...+. |+...|++++.+
T Consensus       119 YVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~------------------~t~~sl~sG~k~siYSLA~N  180 (735)
T KOG0308|consen  119 YVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNN------------------VTVNSLGSGPKDSIYSLAMN  180 (735)
T ss_pred             hheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccc------------------cccccCCCCCccceeeeecC
Confidence            9999999 77888999999999999999987732  111100                  0122222 889999999999


Q ss_pred             CCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeeeeccc
Q psy8430         281 SDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQDI  357 (361)
Q Consensus       281 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h  357 (361)
                      +.|..+++|+..+.+++||.++++.+-.+.||+.-|..+++...+.   +-+.||+|++|  |+   +. .+|+.++..|
T Consensus       181 ~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlW--dL---gq-QrCl~T~~vH  254 (735)
T KOG0308|consen  181 QTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLW--DL---GQ-QRCLATYIVH  254 (735)
T ss_pred             CcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEee--ec---cc-cceeeeEEec
Confidence            9999999999999999999999999999999999999844433321   12399999999  88   55 7899999999


Q ss_pred             ccCC
Q psy8430         358 QSTG  361 (361)
Q Consensus       358 ~~~~  361 (361)
                      +..|
T Consensus       255 ~e~V  258 (735)
T KOG0308|consen  255 KEGV  258 (735)
T ss_pred             cCce
Confidence            8764

>KOG0292|consensus

Probab=99.90  E-value=1.9e-22  Score=185.30  Aligned_cols=201  Identities=21%  Similarity=0.235  Sum_probs=153.0

Q ss_pred             eeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEE
Q psy8430         139 KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV  218 (361)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l  218 (361)
                      ..+++|..  ...+++.+|.||-.-|..+.|++...+|+|+|.|-||+||++.+++++..+.||...|.|..|+|....+
T Consensus        73 ykIkVWnY--k~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlI  150 (1202)
T KOG0292|consen   73 YKIKVWNY--KTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLI  150 (1202)
T ss_pred             cEEEEEec--ccceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceE
Confidence            33444444  4557788999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEECCCcEEEEeccccccccCCCCCCCCCCCCCCC-CCcee--cccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcE
Q psy8430         219 LSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPD-ESSIT--LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVA  295 (361)
Q Consensus       219 ~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v  295 (361)
                      +|+|.|.+|++||+..-.+-.......+......+. .....  ..-....+.||...|+-++|+|.-..+++|+.|+.|
T Consensus       151 VSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqV  230 (1202)
T KOG0292|consen  151 VSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQV  230 (1202)
T ss_pred             EEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCccee
Confidence            999999999999987554432222211100000000 00000  111345678999999999999999999999999999


Q ss_pred             EEeeCCCCe--EEEEeecCCCCCeEEEEEcC---CCcccCCCeEEEEcCCC
Q psy8430         296 NLFDVETGT--ILQSLTGHDEEPHILCVSSY---YSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       296 ~iwd~~~~~--~~~~~~~h~~~v~~~~~s~s---~~~v~~dg~i~iW~~d~  341 (361)
                      ++|.+...+  -+-+..+|-+.|+++++-+.   .++.+.|++||||||+-
T Consensus       231 KlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~k  281 (1202)
T KOG0292|consen  231 KLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTK  281 (1202)
T ss_pred             eEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEeccc
Confidence            999987543  35577899999998555442   11234999999996665

>KOG0277|consensus

Probab=99.90  E-value=1.1e-22  Score=162.06  Aligned_cols=165  Identities=22%  Similarity=0.295  Sum_probs=138.9

Q ss_pred             cCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCC-CeEEEEEeCCCCCeEEEEEec-CCCEEEEEECCCcEEEEeccccc
Q psy8430         160 HRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVINW  236 (361)
Q Consensus       160 h~~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~-~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~lwd~~~~~  236 (361)
                      -...+..++|+++ .+.+++++.||++++||... ..++..++.|...|.++.|++ ++..++++|-|++|++|+...+ 
T Consensus        59 ~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~-  137 (311)
T KOG0277|consen   59 TEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRP-  137 (311)
T ss_pred             cccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCC-
Confidence            4577999999995 45889999999999999643 378899999999999999998 5566888899999999987543 


Q ss_pred             cccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCC
Q psy8430         237 ECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTGHDEE  315 (361)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~  315 (361)
                                               ..+.++.||...|+..+|+| .++.+++++.|+.+++||++.......+..|...
T Consensus       138 -------------------------~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~E  192 (311)
T KOG0277|consen  138 -------------------------NSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSE  192 (311)
T ss_pred             -------------------------cceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccce
Confidence                                     36778999999999999999 6789999999999999999864444448889866


Q ss_pred             CeE---------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430         316 PHI---------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST  360 (361)
Q Consensus       316 v~~---------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~  360 (361)
                      +.+         +++|++     .|+.||+|  |+   |+-..++.++.||+-.
T Consensus       193 il~cdw~ky~~~vl~Tg~-----vd~~vr~w--Di---r~~r~pl~eL~gh~~A  236 (311)
T KOG0277|consen  193 ILCCDWSKYNHNVLATGG-----VDNLVRGW--DI---RNLRTPLFELNGHGLA  236 (311)
T ss_pred             eEeecccccCCcEEEecC-----CCceEEEE--eh---hhccccceeecCCceE
Confidence            666         899999     99999999  99   5444568888998754

>KOG0313|consensus

Probab=99.90  E-value=4e-22  Score=167.17  Aligned_cols=219  Identities=24%  Similarity=0.285  Sum_probs=164.1

Q ss_pred             eeeeeeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCC---CEEEEEeCCCcEEEEeCCCCe----EEEEEeC
Q psy8430         129 TTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQ---PVLGSASADRTVRLWSTQTGK----CVLQYSG  201 (361)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~---~~l~s~s~d~~i~~wd~~~~~----~~~~~~~  201 (361)
                      ....+.+.-+.++..|..   .++.+.++.||.++|.+++|--..   ..|+++|.|.++++|.++.+.    ++....|
T Consensus       115 ~~~IltgsYDg~~riWd~---~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~G  191 (423)
T KOG0313|consen  115 SKWILTGSYDGTSRIWDL---KGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRG  191 (423)
T ss_pred             CceEEEeecCCeeEEEec---CCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcc
Confidence            455666666666666664   678899999999999988875432   269999999999999998774    3444569


Q ss_pred             CCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC
Q psy8430         202 HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS  281 (361)
Q Consensus       202 h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  281 (361)
                      |...|.+|...++|.++++|+.|..+.||+..+.... .......-.............+.|+..+.||..+|.++.|++
T Consensus       192 Hk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~-~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d  270 (423)
T KOG0313|consen  192 HKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEED-ELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD  270 (423)
T ss_pred             cccceeEEEecCCCCeEEeecccceeeecccCCCccc-cccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC
Confidence            9999999999999999999999999999993222110 000000000000011223445678899999999999999997


Q ss_pred             CCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCC-------CeEEEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeee
Q psy8430         282 DGEQVITASWDRVANLFDVETGTILQSLTGHDEE-------PHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVF  354 (361)
Q Consensus       282 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~-------v~~~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~  354 (361)
                       ...+++++.|.+|+.||+.++.++.++.+....       ...++++|+     .|..+|+|  |.+++.. ....+.|
T Consensus       271 -~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gs-----sdr~irl~--DPR~~~g-s~v~~s~  341 (423)
T KOG0313|consen  271 -ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGS-----SDRHIRLW--DPRTGDG-SVVSQSL  341 (423)
T ss_pred             -CCceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecC-----CCCceeec--CCCCCCC-ceeEEee
Confidence             778999999999999999999988887653322       222899999     99999999  9977644 5677889


Q ss_pred             cccccC
Q psy8430         355 QDIQST  360 (361)
Q Consensus       355 ~~h~~~  360 (361)
                      .||+.-
T Consensus       342 ~gH~nw  347 (423)
T KOG0313|consen  342 IGHKNW  347 (423)
T ss_pred             ecchhh
Confidence            999863

>KOG0318|consensus

Probab=99.90  E-value=5.1e-22  Score=172.91  Aligned_cols=205  Identities=20%  Similarity=0.261  Sum_probs=159.5

Q ss_pred             eeeeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe---CCCCCeE
Q psy8430         131 NKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS---GHSGSVN  207 (361)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~---~h~~~v~  207 (361)
                      +...+..+..+..|.-  ...+...++..|..-|.|+.|+|||.+++++|.||+|.+||-.+|+.+..+.   +|.+.|.
T Consensus       162 Ri~T~sdDn~v~ffeG--PPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIf  239 (603)
T KOG0318|consen  162 RIATGSDDNTVAFFEG--PPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIF  239 (603)
T ss_pred             EEEeccCCCeEEEeeC--CCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEE
Confidence            3333444444443333  3446667788999999999999999999999999999999999999999998   8999999


Q ss_pred             EEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCC------CCCC--------CCC---ceecccccEEEeCC
Q psy8430         208 SVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDE------SKEP--------DES---SITLRTPVKELLGH  270 (361)
Q Consensus       208 ~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~------~~~~--------~~~---~~~~~~~~~~~~~~  270 (361)
                      +++|+||+..|+|++.|.+++|||+.+...+...........      +...        ...   ......+...+.||
T Consensus       240 alsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GH  319 (603)
T KOG0318|consen  240 ALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGH  319 (603)
T ss_pred             EEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheeccc
Confidence            999999999999999999999999998866554333222111      0000        000   01112367888999


Q ss_pred             CCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEe-ecCCCCCeEEEEEcC--CCcccCCCeEEEE
Q psy8430         271 SNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL-TGHDEEPHILCVSSY--YSKVSCDLFQRIQ  337 (361)
Q Consensus       271 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~-~~h~~~v~~~~~s~s--~~~v~~dg~i~iW  337 (361)
                      ...|++++.+|++++|++|+.||.|.-||..+|..-+.. .+|+..|..+.++.+  .+.+++|.++++-
T Consensus       320 nK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~  389 (603)
T KOG0318|consen  320 NKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVI  389 (603)
T ss_pred             ccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEE
Confidence            999999999999999999999999999999998876544 679999988776663  3345699999998

>PTZ00421 coronin; Provisional

Probab=99.89  E-value=3.7e-21  Score=177.34  Aligned_cols=180  Identities=20%  Similarity=0.202  Sum_probs=133.8

Q ss_pred             eccceeEEeeecCcc-----ceeeeEEeeccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEE
Q psy8430         135 VQTSKIVSSFKTSLL-----SCYKIRSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNS  208 (361)
Q Consensus       135 ~~~~~~~~~~~~~~~-----~~~~~~~l~~h~~~V~~l~~~~~~-~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~  208 (361)
                      +..+..+..|.....     ...++..+.+|...|.+++|+|++ ++|++|+.|++|++||+.+++.+..+.+|...|.+
T Consensus        94 gS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~s  173 (493)
T PTZ00421         94 ASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITS  173 (493)
T ss_pred             EeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEE
Confidence            333444555654332     124677899999999999999975 69999999999999999999999999999999999


Q ss_pred             EEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCc-EEEEEEcCCCCEEE
Q psy8430         209 VRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNV-VIAADWLSDGEQVI  287 (361)
Q Consensus       209 v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~  287 (361)
                      ++|+|++.+|++++.|++|++||++++.                          .+..+.+|.+. +..+.|.+++..++
T Consensus       174 la~spdG~lLatgs~Dg~IrIwD~rsg~--------------------------~v~tl~~H~~~~~~~~~w~~~~~~iv  227 (493)
T PTZ00421        174 LEWNLDGSLLCTTSKDKKLNIIDPRDGT--------------------------IVSSVEAHASAKSQRCLWAKRKDLII  227 (493)
T ss_pred             EEEECCCCEEEEecCCCEEEEEECCCCc--------------------------EEEEEecCCCCcceEEEEcCCCCeEE
Confidence            9999999999999999999999998662                          45567778754 45678999888888


Q ss_pred             EEe----CCCcEEEeeCCCCe-EEEEeecCCCC-CeEEEEEcCC--Ccc-c-CCCeEEEEcCCCC
Q psy8430         288 TAS----WDRVANLFDVETGT-ILQSLTGHDEE-PHILCVSSYY--SKV-S-CDLFQRIQHLDCG  342 (361)
Q Consensus       288 s~~----~d~~v~iwd~~~~~-~~~~~~~h~~~-v~~~~~s~s~--~~v-~-~dg~i~iW~~d~~  342 (361)
                      +++    .|+.|++||+++.. ++.....+... +...+++.+.  .++ + .||.|++|  |+.
T Consensus       228 t~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriw--dl~  290 (493)
T PTZ00421        228 TLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCF--ELM  290 (493)
T ss_pred             EEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEE--Eee
Confidence            765    47899999998754 44444333322 2221122111  111 1 59999999  773

>KOG0313|consensus

Probab=99.89  E-value=2.7e-22  Score=168.20  Aligned_cols=171  Identities=22%  Similarity=0.284  Sum_probs=143.1

Q ss_pred             eeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC-------------------------CCeEEEEEeCCCCCeE
Q psy8430         153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ-------------------------TGKCVLQYSGHSGSVN  207 (361)
Q Consensus       153 ~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~-------------------------~~~~~~~~~~h~~~v~  207 (361)
                      .++.-.||.+.|-++...++|..+++||.|.+|++|+..                         ++.++.++.||..+|.
T Consensus       185 ~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs  264 (423)
T KOG0313|consen  185 ALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVS  264 (423)
T ss_pred             HHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEeccccccee
Confidence            334445999999999999999999999999999999932                         1235677899999999


Q ss_pred             EEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEE
Q psy8430         208 SVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI  287 (361)
Q Consensus       208 ~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  287 (361)
                      +|.|++ ...+++++.|.+|+.||+.++.                          ....+. ......++.++|..++|+
T Consensus       265 ~V~w~d-~~v~yS~SwDHTIk~WDletg~--------------------------~~~~~~-~~ksl~~i~~~~~~~Ll~  316 (423)
T KOG0313|consen  265 SVVWSD-ATVIYSVSWDHTIKVWDLETGG--------------------------LKSTLT-TNKSLNCISYSPLSKLLA  316 (423)
T ss_pred             eEEEcC-CCceEeecccceEEEEEeeccc--------------------------ceeeee-cCcceeEeecccccceee
Confidence            999987 7789999999999999998773                          233333 356788999999999999


Q ss_pred             EEeCCCcEEEeeCCCCe---EEEEeecCCCCCeE---------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeec
Q psy8430         288 TASWDRVANLFDVETGT---ILQSLTGHDEEPHI---------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQ  355 (361)
Q Consensus       288 s~~~d~~v~iwd~~~~~---~~~~~~~h~~~v~~---------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~  355 (361)
                      +|+.|..+++||.+++.   ..+++.+|.+-|.+         .++|++     +|+++++|  |+   |....++..+.
T Consensus       317 ~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S-----~D~t~klW--Dv---RS~k~plydI~  386 (423)
T KOG0313|consen  317 SGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGS-----YDNTVKLW--DV---RSTKAPLYDIA  386 (423)
T ss_pred             ecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEe-----cCCeEEEE--Ee---ccCCCcceeec
Confidence            99999999999999753   45789999998887         566666     99999999  99   77666889999


Q ss_pred             ccccCC
Q psy8430         356 DIQSTG  361 (361)
Q Consensus       356 ~h~~~~  361 (361)
                      ||.+.|
T Consensus       387 ~h~DKv  392 (423)
T KOG0313|consen  387 GHNDKV  392 (423)
T ss_pred             cCCceE
Confidence            997643

>KOG0643|consensus

Probab=99.89  E-value=7.2e-22  Score=158.50  Aligned_cols=179  Identities=19%  Similarity=0.301  Sum_probs=148.4

Q ss_pred             EeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecccc
Q psy8430         156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN  235 (361)
Q Consensus       156 ~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~  235 (361)
                      -++||..+++.+.++.+|.+|++|+.|.++.+|-..+|+.+.++.||.+.|+|+..+-+.+.+++|+.|.++++||+.++
T Consensus         5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tG   84 (327)
T KOG0643|consen    5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETG   84 (327)
T ss_pred             ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCC
Confidence            36799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCC-----------------CC----------CCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEE
Q psy8430         236 WECLNNDNDSDLDES-----------------KE----------PDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT  288 (361)
Q Consensus       236 ~~~~~~~~~~~~~~~-----------------~~----------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s  288 (361)
                      +++............                 ..          ..........|...+..+.+.++.+-|.|.+++|++
T Consensus        85 k~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~  164 (327)
T KOG0643|consen   85 KQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIA  164 (327)
T ss_pred             cEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEE
Confidence            876543222111100                 00          001112234567778888899999999999999999


Q ss_pred             EeCCCcEEEeeCCCC-eEEEEeecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         289 ASWDRVANLFDVETG-TILQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       289 ~~~d~~v~iwd~~~~-~~~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      |..||.|.+||+++| +.+..-..|+..|+.        ++++++     .|.+-++|  |.
T Consensus       165 Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s-----~Dttakl~--D~  219 (327)
T KOG0643|consen  165 GHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGS-----KDTTAKLV--DV  219 (327)
T ss_pred             ecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecc-----cCccceee--ec
Confidence            999999999999998 555666778888887        566677     99999999  87

>KOG0300|consensus

Probab=99.89  E-value=4.8e-22  Score=163.25  Aligned_cols=196  Identities=20%  Similarity=0.295  Sum_probs=159.8

Q ss_pred             ccceeeeeeeccceeEEe------------------eecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q psy8430         126 KLKTTNKLKVQTSKIVSS------------------FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRL  187 (361)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~  187 (361)
                      ..+..+.+.+|.+.+..+                  ..|....+.++.++.||.+.|++++|++.+.++++++.|++..|
T Consensus       137 ~~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHI  216 (481)
T KOG0300|consen  137 KFRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHI  216 (481)
T ss_pred             eEeehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHH
Confidence            345566667777766432                  22344778999999999999999999999999999999999999


Q ss_pred             EeC------CC------------------------------C----eEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcE
Q psy8430         188 WST------QT------------------------------G----KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSV  227 (361)
Q Consensus       188 wd~------~~------------------------------~----~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i  227 (361)
                      |..      ..                              +    .++..+.+|.+.|.+..|-..|+.+++++.|.+.
T Consensus       217 W~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTA  296 (481)
T KOG0300|consen  217 WKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTA  296 (481)
T ss_pred             HHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccc
Confidence            962      10                              0    1455678999999999999999999999999999


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC-CeEE
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET-GTIL  306 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~-~~~~  306 (361)
                      .+||+.++                          .++..+.||....+.++-+|..+++++.+.|.++++||++. -..+
T Consensus       297 nlwDVEtg--------------------------e~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV  350 (481)
T KOG0300|consen  297 NLWDVETG--------------------------EVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSV  350 (481)
T ss_pred             eeeeeccC--------------------------ceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhccee
Confidence            99999887                          36778899999999999999999999999999999999984 3557


Q ss_pred             EEeecCCCCCeEEEEEcCCCc--ccCCCeEEEEcCCCCCCCCcce
Q psy8430         307 QSLTGHDEEPHILCVSSYYSK--VSCDLFQRIQHLDCGTSENPIH  349 (361)
Q Consensus       307 ~~~~~h~~~v~~~~~s~s~~~--v~~dg~i~iW~~d~~~~~~~~~  349 (361)
                      ..+++|+..|++.+|.-++.-  .+.|.+|+||  |++++|.|+.
T Consensus       351 ~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvW--dLrNMRsplA  393 (481)
T KOG0300|consen  351 AVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVW--DLRNMRSPLA  393 (481)
T ss_pred             eeecccccceeEEEEecCCceeecCCCceEEEe--eeccccCcce
Confidence            788999999999444333221  1399999999  9988887653

>KOG0315|consensus

Probab=99.89  E-value=2e-21  Score=154.46  Aligned_cols=181  Identities=17%  Similarity=0.208  Sum_probs=148.6

Q ss_pred             cCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--eEEEEEeCCCCCeEEEEEecCCCEEEEEEC
Q psy8430         146 TSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVNSVRFLPNKDLVLSASG  223 (361)
Q Consensus       146 ~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~--~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~  223 (361)
                      |...++.+.++++...+.|+.+.+.|++..||+++. -.|++||++++  .++.+|.+|...|.+|.|..+|++++||+.
T Consensus        25 Wqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgse  103 (311)
T KOG0315|consen   25 WQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSE  103 (311)
T ss_pred             eehhcCeEEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCC
Confidence            344567778889888899999999999999998876 48999999887  469999999999999999999999999999


Q ss_pred             CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC
Q psy8430         224 DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  303 (361)
Q Consensus       224 d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~  303 (361)
                      ||+++|||++..                           ...+...|.++|+++..+|+...|++|..+|.|++||+...
T Consensus       104 Dgt~kIWdlR~~---------------------------~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~  156 (311)
T KOG0315|consen  104 DGTVKIWDLRSL---------------------------SCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGEN  156 (311)
T ss_pred             CceEEEEeccCc---------------------------ccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCC
Confidence            999999999864                           23344457799999999999999999999999999999987


Q ss_pred             eEEEEeec-CCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeeccccc
Q psy8430         304 TILQSLTG-HDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQS  359 (361)
Q Consensus       304 ~~~~~~~~-h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~  359 (361)
                      .|...+.. ....+.+        +++.+.     .-|+..+|++-....-.+..++..|++|++
T Consensus       157 ~c~~~liPe~~~~i~sl~v~~dgsml~a~n-----nkG~cyvW~l~~~~~~s~l~P~~k~~ah~~  216 (311)
T KOG0315|consen  157 SCTHELIPEDDTSIQSLTVMPDGSMLAAAN-----NKGNCYVWRLLNHQTASELEPVHKFQAHNG  216 (311)
T ss_pred             ccccccCCCCCcceeeEEEcCCCcEEEEec-----CCccEEEEEccCCCccccceEhhheecccc
Confidence            66655532 2334444        445555     889999996554444556789999999986

>KOG0289|consensus

Probab=99.89  E-value=8.5e-22  Score=167.81  Aligned_cols=169  Identities=20%  Similarity=0.190  Sum_probs=142.7

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEE
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  228 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~  228 (361)
                      ...+.+.+|+||...|+.+.++|+...+++++.|..|++|.............|..+|+.+..+|.|.+|++++.||+..
T Consensus       249 ~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~  328 (506)
T KOG0289|consen  249 PSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWA  328 (506)
T ss_pred             chhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccccccccccceeeeeccCCcEEEEecCCceEE
Confidence            45578889999999999999999999999999999999999987777777788999999999999999999999999999


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEE
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS  308 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~  308 (361)
                      +.|++++...                        ....-.+..-.+++.+|||||-.+.+|..|+.|+|||+.++..+..
T Consensus       329 Fsd~~~g~~l------------------------t~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~  384 (506)
T KOG0289|consen  329 FSDISSGSQL------------------------TVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAK  384 (506)
T ss_pred             EEEccCCcEE------------------------EEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCcccccc
Confidence            9999877321                        1111112334689999999999999999999999999999999999


Q ss_pred             eecCCCCCeEEEEEcCCCcc---cCCCeEEEEcCCCCCCCC
Q psy8430         309 LTGHDEEPHILCVSSYYSKV---SCDLFQRIQHLDCGTSEN  346 (361)
Q Consensus       309 ~~~h~~~v~~~~~s~s~~~v---~~dg~i~iW~~d~~~~~~  346 (361)
                      +.+|+++|..+-|+-.+.++   +.|+.|++|  |+   |+
T Consensus       385 Fpght~~vk~i~FsENGY~Lat~add~~V~lw--DL---RK  420 (506)
T KOG0289|consen  385 FPGHTGPVKAISFSENGYWLATAADDGSVKLW--DL---RK  420 (506)
T ss_pred             CCCCCCceeEEEeccCceEEEEEecCCeEEEE--Ee---hh
Confidence            99999999994444332211   289999999  99   66

>KOG0283|consensus

Probab=99.89  E-value=2e-22  Score=184.75  Aligned_cols=173  Identities=23%  Similarity=0.344  Sum_probs=139.1

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec-CCCEEEEEECCCcEEEE
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIW  230 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~lw  230 (361)
                      ++++.+.||.+.|.+|.|+.++ +|+++|.|.||++|++....|+.+|. |...|+||+|+| |.++|++|+.||.|+||
T Consensus       360 kP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~KvRiW  437 (712)
T KOG0283|consen  360 KPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDGKVRLW  437 (712)
T ss_pred             cchhhhhccchhheecccccCC-eeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeecccccceEEe
Confidence            6889999999999999999876 99999999999999999999999998 999999999999 78899999999999999


Q ss_pred             eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430         231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~  310 (361)
                      ++...                           .+..+..-...|++++|.|+|++.+.|+.+|..++|+....+....+.
T Consensus       438 sI~d~---------------------------~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~  490 (712)
T KOG0283|consen  438 SISDK---------------------------KVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFH  490 (712)
T ss_pred             ecCcC---------------------------eeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeee
Confidence            98644                           333333345789999999999999999999999999998766655443


Q ss_pred             c--C------CCCCeEEEEEcCCC---c-ccCCCeEEEEcCCCCCCCCcceeeeeeccccc
Q psy8430         311 G--H------DEEPHILCVSSYYS---K-VSCDLFQRIQHLDCGTSENPIHSVCVFQDIQS  359 (361)
Q Consensus       311 ~--h------~~~v~~~~~s~s~~---~-v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~  359 (361)
                      .  |      ...|+.+-+.++..   - .+.|..|||+  |.   |. ..+++.|.|+..
T Consensus       491 I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~--d~---~~-~~lv~KfKG~~n  545 (712)
T KOG0283|consen  491 IRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIY--DG---RD-KDLVHKFKGFRN  545 (712)
T ss_pred             EeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEE--ec---cc-hhhhhhhccccc
Confidence            2  1      11455532222211   0 1389999999  88   55 567888888764

>KOG0296|consensus

Probab=99.89  E-value=3.4e-21  Score=160.85  Aligned_cols=158  Identities=18%  Similarity=0.298  Sum_probs=140.7

Q ss_pred             eEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecc
Q psy8430         154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV  233 (361)
Q Consensus       154 ~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~  233 (361)
                      +.+|..|+++|.+++.+|+.+++++||.|....+|++.+|.....+.+|..+|.++.|+.+|.+|+||..+|.|+||...
T Consensus        57 ~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~s  136 (399)
T KOG0296|consen   57 LVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVS  136 (399)
T ss_pred             eeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcc
Confidence            45788999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCC
Q psy8430         234 INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD  313 (361)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~  313 (361)
                      ++..                          ...+...-..+.=+.|||.+..|++|+.||.+-+|.+.++...+.+.+|.
T Consensus       137 tg~~--------------------------~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~  190 (399)
T KOG0296|consen  137 TGGE--------------------------QWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHN  190 (399)
T ss_pred             cCce--------------------------EEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCC
Confidence            7632                          22333344556668999999999999999999999999988889999999


Q ss_pred             CCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCC
Q psy8430         314 EEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTS  344 (361)
Q Consensus       314 ~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~  344 (361)
                      .++++        .++++.     .||+|++|  |..|+
T Consensus       191 ~~ct~G~f~pdGKr~~tgy-----~dgti~~W--n~ktg  222 (399)
T KOG0296|consen  191 SPCTCGEFIPDGKRILTGY-----DDGTIIVW--NPKTG  222 (399)
T ss_pred             CCcccccccCCCceEEEEe-----cCceEEEE--ecCCC
Confidence            99988        788888     99999999  88443

>KOG1332|consensus

Probab=99.89  E-value=4.9e-22  Score=157.51  Aligned_cols=183  Identities=23%  Similarity=0.293  Sum_probs=149.1

Q ss_pred             eeeeeeccceeEEeeecCccce-eeeEEeeccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCe--EEEEEeCCCC
Q psy8430         130 TNKLKVQTSKIVSSFKTSLLSC-YKIRSFSGHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSG  204 (361)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~h~~~V~~l~~~~--~~~~l~s~s~d~~i~~wd~~~~~--~~~~~~~h~~  204 (361)
                      .+......+..+++|.-..+.. +++.+|.||+++|+.++|-.  -|++||+++.||.|.||.-.+|+  ....+..|..
T Consensus        24 krlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~  103 (299)
T KOG1332|consen   24 KRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSA  103 (299)
T ss_pred             ceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcc
Confidence            3444556677778787777665 89999999999999999976  79999999999999999988773  4556678999


Q ss_pred             CeEEEEEecC--CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC
Q psy8430         205 SVNSVRFLPN--KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD  282 (361)
Q Consensus       205 ~v~~v~~~~~--~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  282 (361)
                      .|++|+|.|.  |-.|++++.||.|.|.+.+...                       .....+....|.-.|++++|.|.
T Consensus       104 SVNsV~wapheygl~LacasSDG~vsvl~~~~~g-----------------------~w~t~ki~~aH~~GvnsVswapa  160 (299)
T KOG1332|consen  104 SVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSG-----------------------GWTTSKIVFAHEIGVNSVSWAPA  160 (299)
T ss_pred             cceeecccccccceEEEEeeCCCcEEEEEEcCCC-----------------------CccchhhhhccccccceeeecCc
Confidence            9999999994  6679999999999999876431                       12244556689999999999995


Q ss_pred             ---C-----------CEEEEEeCCCcEEEeeCCCCeE--EEEeecCCCCCeE------------EEEEcCCCcccCCCeE
Q psy8430         283 ---G-----------EQVITASWDRVANLFDVETGTI--LQSLTGHDEEPHI------------LCVSSYYSKVSCDLFQ  334 (361)
Q Consensus       283 ---~-----------~~l~s~~~d~~v~iwd~~~~~~--~~~~~~h~~~v~~------------~~~s~s~~~v~~dg~i  334 (361)
                         |           +.|++|+.|+.|+||+..+++-  -++|.+|++-|+.            .++|++     .||++
T Consensus       161 ~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~S-----qDg~v  235 (299)
T KOG1332|consen  161 SAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCS-----QDGTV  235 (299)
T ss_pred             CCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEec-----CCCcE
Confidence               4           5799999999999999987632  3468899988877            677888     99999


Q ss_pred             EEEcCC
Q psy8430         335 RIQHLD  340 (361)
Q Consensus       335 ~iW~~d  340 (361)
                      -||..+
T Consensus       236 iIwt~~  241 (299)
T KOG1332|consen  236 IIWTKD  241 (299)
T ss_pred             EEEEec
Confidence            999444

>KOG0267|consensus

Probab=99.88  E-value=4.6e-23  Score=185.51  Aligned_cols=157  Identities=23%  Similarity=0.375  Sum_probs=146.5

Q ss_pred             eeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430         153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       153 ~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~  232 (361)
                      .+..|.+|.++|-++.|++...+|++|+.+|+|++||+..++.++++.+|...+.+|.|+|.+.++++|+.|+.+++||+
T Consensus        62 ~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~  141 (825)
T KOG0267|consen   62 AITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDI  141 (825)
T ss_pred             hhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhh
Confidence            34458899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecC
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH  312 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h  312 (361)
                      +..                          .|.+.+.+|...|..+.|+|+|+|++.|+.|.+++|||...|+.+..|..|
T Consensus       142 Rk~--------------------------Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~  195 (825)
T KOG0267|consen  142 RKK--------------------------GCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSH  195 (825)
T ss_pred             hcc--------------------------CceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccccccccc
Confidence            843                          278889999999999999999999999999999999999999999999999


Q ss_pred             CCCCeE--------EEEEcCCCcccCCCeEEEEcCCCC
Q psy8430         313 DEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCG  342 (361)
Q Consensus       313 ~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~  342 (361)
                      ++.+..        ++++|+     .|+++++|  |++
T Consensus       196 e~~v~sle~hp~e~Lla~Gs-----~d~tv~f~--dle  226 (825)
T KOG0267|consen  196 EGKVQSLEFHPLEVLLAPGS-----SDRTVRFW--DLE  226 (825)
T ss_pred             cccccccccCchhhhhccCC-----CCceeeee--ccc
Confidence            988887        788888     99999999  774

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.88  E-value=5.6e-21  Score=165.63  Aligned_cols=175  Identities=27%  Similarity=0.451  Sum_probs=147.3

Q ss_pred             eEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecc
Q psy8430         154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV  233 (361)
Q Consensus       154 ~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~  233 (361)
                      ++++++|.++|++++|+|++++|++++.||.|++|++.+++....+..|...+..+.|+|+++.+++++.||.+.+|++.
T Consensus         2 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~   81 (289)
T cd00200           2 RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLE   81 (289)
T ss_pred             chHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcC
Confidence            45678999999999999999999999999999999999888888888999999999999999999999999999999987


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCC
Q psy8430         234 INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD  313 (361)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~  313 (361)
                      .+                          .....+..|...+.++.|+|++.++++++.|+.+.+||+++++....+..|.
T Consensus        82 ~~--------------------------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  135 (289)
T cd00200          82 TG--------------------------ECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHT  135 (289)
T ss_pred             cc--------------------------cceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCC
Confidence            54                          2456677888899999999999999998889999999999999999999898


Q ss_pred             CCCeEEEEEcC--CCccc-CCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430         314 EEPHILCVSSY--YSKVS-CDLFQRIQHLDCGTSENPIHSVCVFQDIQST  360 (361)
Q Consensus       314 ~~v~~~~~s~s--~~~v~-~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~  360 (361)
                      ..+.++.+++.  ++.++ .||.|++|  |+   +. ..++..+.+|...
T Consensus       136 ~~i~~~~~~~~~~~l~~~~~~~~i~i~--d~---~~-~~~~~~~~~~~~~  179 (289)
T cd00200         136 DWVNSVAFSPDGTFVASSSQDGTIKLW--DL---RT-GKCVATLTGHTGE  179 (289)
T ss_pred             CcEEEEEEcCcCCEEEEEcCCCcEEEE--Ec---cc-cccceeEecCccc
Confidence            88888555553  22223 59999999  77   32 3445566666543

>KOG0291|consensus

Probab=99.88  E-value=5e-21  Score=173.31  Aligned_cols=176  Identities=15%  Similarity=0.238  Sum_probs=152.7

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCC-CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcE
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD-RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSV  227 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d-~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i  227 (361)
                      ....+++.+.-...+|..++|+..|.+|+.|+.. |.+.+|++++...+...++|...+++++++|||++++||+.||.|
T Consensus       295 P~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKV  374 (893)
T KOG0291|consen  295 PDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKV  374 (893)
T ss_pred             CCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcE
Confidence            4567888888888999999999999999998765 899999999999999999999999999999999999999999999


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEE
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ  307 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~  307 (361)
                      +|||...+                          -|..++..|++.|+++.|+..|+.+++.+-||+|+.||+..+++.+
T Consensus       375 KvWn~~Sg--------------------------fC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfR  428 (893)
T KOG0291|consen  375 KVWNTQSG--------------------------FCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFR  428 (893)
T ss_pred             EEEeccCc--------------------------eEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceee
Confidence            99998776                          3789999999999999999999999999999999999999999999


Q ss_pred             EeecCCCCCeE---------EEEEcCCCcccCC-CeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         308 SLTGHDEEPHI---------LCVSSYYSKVSCD-LFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       308 ~~~~h~~~v~~---------~~~s~s~~~v~~d-g~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      ++......-.+         +++.|+     .| =.|.||  ++   .. ++.+-.+.||.++|
T Consensus       429 Tft~P~p~QfscvavD~sGelV~AG~-----~d~F~IfvW--S~---qT-GqllDiLsGHEgPV  481 (893)
T KOG0291|consen  429 TFTSPEPIQFSCVAVDPSGELVCAGA-----QDSFEIFVW--SV---QT-GQLLDILSGHEGPV  481 (893)
T ss_pred             eecCCCceeeeEEEEcCCCCEEEeec-----cceEEEEEE--Ee---ec-CeeeehhcCCCCcc
Confidence            99865432221         333333     44 378999  87   33 66789999999986

>KOG0264|consensus

Probab=99.88  E-value=1.2e-21  Score=167.99  Aligned_cols=181  Identities=23%  Similarity=0.313  Sum_probs=145.5

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCC-------eEEEEEeCCCCCeEEEEEec-CCCEEEE
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTG-------KCVLQYSGHSGSVNSVRFLP-NKDLVLS  220 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~-------~~~~~~~~h~~~v~~v~~~~-~~~~l~s  220 (361)
                      .+.+-.+|.||.+.-++++|++... .|++|+.|++|++||+...       .+...+.+|...|..++|++ +..+|++
T Consensus       166 ~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~s  245 (422)
T KOG0264|consen  166 ECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGS  245 (422)
T ss_pred             cCCCceEEEeecccccccccccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhhee
Confidence            4455668999999889999999544 9999999999999999643       24567889999999999999 5668999


Q ss_pred             EECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEee
Q psy8430         221 ASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFD  299 (361)
Q Consensus       221 ~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd  299 (361)
                      ++.|+.+.|||+|++                        ..++.....+|.+.|.+++|+| ++..|++|+.|++|++||
T Consensus       246 v~dd~~L~iwD~R~~------------------------~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwD  301 (422)
T KOG0264|consen  246 VGDDGKLMIWDTRSN------------------------TSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWD  301 (422)
T ss_pred             ecCCCeEEEEEcCCC------------------------CCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEee
Confidence            999999999999863                        1136677889999999999999 555678899999999999


Q ss_pred             CCCC-eEEEEeecCCCCCeE---------EEEEcCCCcccCCCeEEEEcCCCCCCC----------Ccceeeeeeccccc
Q psy8430         300 VETG-TILQSLTGHDEEPHI---------LCVSSYYSKVSCDLFQRIQHLDCGTSE----------NPIHSVCVFQDIQS  359 (361)
Q Consensus       300 ~~~~-~~~~~~~~h~~~v~~---------~~~s~s~~~v~~dg~i~iW~~d~~~~~----------~~~~~v~~~~~h~~  359 (361)
                      +|+. +++.++.+|...|..         +++|++     .|+.+.||  |+.--.          .|..++..=.||++
T Consensus       302 lRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg-----~D~rl~vW--Dls~ig~eq~~eda~dgppEllF~HgGH~~  374 (422)
T KOG0264|consen  302 LRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSG-----TDRRLNVW--DLSRIGEEQSPEDAEDGPPELLFIHGGHTA  374 (422)
T ss_pred             chhcccCceeccCCCcceEEEEeCCCCCceeEecc-----cCCcEEEE--eccccccccChhhhccCCcceeEEecCccc
Confidence            9964 578899999999998         566666     99999999  652211          12234455578887


Q ss_pred             CC
Q psy8430         360 TG  361 (361)
Q Consensus       360 ~~  361 (361)
                      .|
T Consensus       375 kV  376 (422)
T KOG0264|consen  375 KV  376 (422)
T ss_pred             cc
Confidence            64

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.87  E-value=2.6e-20  Score=184.19  Aligned_cols=167  Identities=17%  Similarity=0.240  Sum_probs=137.0

Q ss_pred             cCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec-CCCEEEEEECCCcEEEEecccccc
Q psy8430         160 HRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVINWE  237 (361)
Q Consensus       160 h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~lwd~~~~~~  237 (361)
                      +...|.+++|+| ++.+|++++.||+|++||+.+++.+..+.+|.+.|.+++|+| ++.+|++|+.||+|++||++++. 
T Consensus       531 ~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~-  609 (793)
T PLN00181        531 SRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV-  609 (793)
T ss_pred             ccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCc-
Confidence            346799999988 578999999999999999999999999999999999999997 78899999999999999987652 


Q ss_pred             ccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEc-CCCCEEEEEeCCCcEEEeeCCCCe-EEEEeecCCCC
Q psy8430         238 CLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL-SDGEQVITASWDRVANLFDVETGT-ILQSLTGHDEE  315 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~h~~~  315 (361)
                                               .+..+..+ ..+.++.|+ ++|.++++|+.||.|++||++++. .+..+.+|...
T Consensus       610 -------------------------~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~  663 (793)
T PLN00181        610 -------------------------SIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKT  663 (793)
T ss_pred             -------------------------EEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCC
Confidence                                     34444433 578899995 579999999999999999998765 56788899988


Q ss_pred             CeEE-------EEEcCCCcccCCCeEEEEcCCCCCCC--CcceeeeeecccccC
Q psy8430         316 PHIL-------CVSSYYSKVSCDLFQRIQHLDCGTSE--NPIHSVCVFQDIQST  360 (361)
Q Consensus       316 v~~~-------~~s~s~~~v~~dg~i~iW~~d~~~~~--~~~~~v~~~~~h~~~  360 (361)
                      |..+       +++++     .|+.|+||  |+.+..  ....++..|.||...
T Consensus       664 V~~v~f~~~~~lvs~s-----~D~~ikiW--d~~~~~~~~~~~~l~~~~gh~~~  710 (793)
T PLN00181        664 VSYVRFVDSSTLVSSS-----TDNTLKLW--DLSMSISGINETPLHSFMGHTNV  710 (793)
T ss_pred             EEEEEEeCCCEEEEEE-----CCCEEEEE--eCCCCccccCCcceEEEcCCCCC
Confidence            8874       44555     99999999  763321  113567889999764

>PTZ00420 coronin; Provisional

Probab=99.87  E-value=4.5e-20  Score=171.20  Aligned_cols=155  Identities=14%  Similarity=0.150  Sum_probs=124.4

Q ss_pred             eeEEeeccCCCeEEEEEcCCCCE-EEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430         153 KIRSFSGHRDGVWDVAVRPGQPV-LGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       153 ~~~~l~~h~~~V~~l~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd  231 (361)
                      ++..+.+|.+.|.+++|+|++.. |++|+.|++|++||+.+++.+..+. |...|.+++|+|+|.+|++++.|+.|+|||
T Consensus       117 p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD  195 (568)
T PTZ00420        117 PQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIID  195 (568)
T ss_pred             ceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEE
Confidence            45678899999999999998875 5799999999999999998777776 678899999999999999999999999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEE-----EEEcCCCCEEEEEeCCC----cEEEeeCCC
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIA-----ADWLSDGEQVITASWDR----VANLFDVET  302 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~l~s~~~d~----~v~iwd~~~  302 (361)
                      ++++.                          .+..+.+|.+.+.+     ..|++++.++++++.|+    .|+|||+++
T Consensus       196 ~Rsg~--------------------------~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~  249 (568)
T PTZ00420        196 PRKQE--------------------------IASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKN  249 (568)
T ss_pred             CCCCc--------------------------EEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCC
Confidence            98762                          45667788765433     34568999999988774    799999995


Q ss_pred             -CeEEEEeecC--CCCCeE--------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         303 -GTILQSLTGH--DEEPHI--------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       303 -~~~~~~~~~h--~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                       ++++..+..+  .+.+..        ++++|+     .|+.|++|  ++
T Consensus       250 ~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGk-----GD~tIr~~--e~  292 (568)
T PTZ00420        250 TTSALVTMSIDNASAPLIPHYDESTGLIYLIGK-----GDGNCRYY--QH  292 (568)
T ss_pred             CCCceEEEEecCCccceEEeeeCCCCCEEEEEE-----CCCeEEEE--Ec
Confidence             5666655432  233211        667777     99999999  66

>KOG0318|consensus

Probab=99.87  E-value=1.3e-20  Score=164.20  Aligned_cols=184  Identities=21%  Similarity=0.263  Sum_probs=152.0

Q ss_pred             eeecCccceeeeEEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEE
Q psy8430         143 SFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA  221 (361)
Q Consensus       143 ~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~  221 (361)
                      +|.++  ++..+..+.||...|++++|-|..+ .+++||.|++|.+|+-..-+...++..|..-|+|+.|+|||..|+++
T Consensus       131 ~F~~D--SG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~  208 (603)
T KOG0318|consen  131 VFLWD--SGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATA  208 (603)
T ss_pred             EEEec--CCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEe
Confidence            44443  3345677889999999999999777 89999999999999987778888888999999999999999999999


Q ss_pred             ECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe---CCCCcEEEEEEcCCCCEEEEEeCCCcEEEe
Q psy8430         222 SGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL---GHSNVVIAADWLSDGEQVITASWDRVANLF  298 (361)
Q Consensus       222 ~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~d~~v~iw  298 (361)
                      +.||++.+||=.++.                          .+..+.   +|.+.|++++|+||++.+++++.|.+++||
T Consensus       209 gsDgki~iyDGktge--------------------------~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIW  262 (603)
T KOG0318|consen  209 GSDGKIYIYDGKTGE--------------------------KVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIW  262 (603)
T ss_pred             cCCccEEEEcCCCcc--------------------------EEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEE
Confidence            999999999977763                          344444   899999999999999999999999999999


Q ss_pred             eCCCCeEEEEeecCCCCCeE----EEEEcC-CCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         299 DVETGTILQSLTGHDEEPHI----LCVSSY-YSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       299 d~~~~~~~~~~~~h~~~v~~----~~~s~s-~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      |+.+.++++++...+. +..    +++..+ .+.|+-+|.|.++  +.   .. ..+..++.||.-.|
T Consensus       263 dVs~~slv~t~~~~~~-v~dqqvG~lWqkd~lItVSl~G~in~l--n~---~d-~~~~~~i~GHnK~I  323 (603)
T KOG0318|consen  263 DVSTNSLVSTWPMGST-VEDQQVGCLWQKDHLITVSLSGTINYL--NP---SD-PSVLKVISGHNKSI  323 (603)
T ss_pred             EeeccceEEEeecCCc-hhceEEEEEEeCCeEEEEEcCcEEEEe--cc---cC-CChhheecccccce
Confidence            9999999999975433 222    555544 3356699999999  77   33 23678889997654

>KOG0294|consensus

Probab=99.87  E-value=9.7e-21  Score=155.40  Aligned_cols=189  Identities=18%  Similarity=0.286  Sum_probs=139.7

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCC--EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCc
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS  226 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~--~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~  226 (361)
                      .+...+..+-.|.+.|+++.|.++-.  .|++|+.||.|.+|+.....++.++++|.+.|+.++.+|.+++.++.+.|+.
T Consensus        71 ~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~  150 (362)
T KOG0294|consen   71 RKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQV  150 (362)
T ss_pred             cchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCce
Confidence            33455666778999999999999765  8999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeccccccccCCCCCCCCCCCC-CCCCC--ceecccccEEEe----------CCCCcEEEEEEcCCCCEEEEEeCCC
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESK-EPDES--SITLRTPVKELL----------GHSNVVIAADWLSDGEQVITASWDR  293 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~s~~~d~  293 (361)
                      +++||+..+....-........... .+.+.  ....+..+..+.          .....+.++.|. ++.+|++|+.|+
T Consensus       151 lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l-~~~~L~vG~d~~  229 (362)
T KOG0294|consen  151 LRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFREIENPKRILCATFL-DGSELLVGGDNE  229 (362)
T ss_pred             eeeehhhcCccceeeccCCcceeeEEcCCCCEEEEEeccEEEEEecccHhHhhhhhccccceeeeec-CCceEEEecCCc
Confidence            9999998774421111000000000 00000  000011111111          112335566665 678999999999


Q ss_pred             cEEEeeCCCCeEEEEeecCCCCCeE----------EEEEcCCCcccCCCeEEEEcCCCCC
Q psy8430         294 VANLFDVETGTILQSLTGHDEEPHI----------LCVSSYYSKVSCDLFQRIQHLDCGT  343 (361)
Q Consensus       294 ~v~iwd~~~~~~~~~~~~h~~~v~~----------~~~s~s~~~v~~dg~i~iW~~d~~~  343 (361)
                      .|.+||..++.+...+.+|...|..          +++|++     .||.|+|||+|..+
T Consensus       230 ~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaS-----SDG~I~vWd~~~~~  284 (362)
T KOG0294|consen  230 WISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTAS-----SDGFIKVWDIDMET  284 (362)
T ss_pred             eEEEeccCCCccceeeecchhheeeeEEEecCCceEEEEec-----cCceEEEEEccccc
Confidence            9999999999999999999998877          677777     99999999666643

>KOG0264|consensus

Probab=99.87  E-value=1.1e-20  Score=162.11  Aligned_cols=157  Identities=29%  Similarity=0.407  Sum_probs=135.0

Q ss_pred             eeeeEEeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCC--CCeEEEEEeCCCCCeEEEEEec-CCCEEEEEECCCc
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQ--TGKCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKS  226 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~--~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~  226 (361)
                      ..+...+.+|...|..++|++ +..+|++++.|+.+.|||++  +.++.....+|.+.|+|++|+| ++..|||||.|++
T Consensus       217 ~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~t  296 (422)
T KOG0264|consen  217 VDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKT  296 (422)
T ss_pred             ccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCc
Confidence            346677889999999999999 55699999999999999999  5567777889999999999999 5667999999999


Q ss_pred             EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEeeCCC---
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD-GEQVITASWDRVANLFDVET---  302 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~v~iwd~~~---  302 (361)
                      |.+||+|+-.                         .++..+.+|...|..+.|+|. ...|++++.|+.+.|||+..   
T Consensus       297 V~LwDlRnL~-------------------------~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~  351 (422)
T KOG0264|consen  297 VALWDLRNLN-------------------------KPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGE  351 (422)
T ss_pred             EEEeechhcc-------------------------cCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEecccccc
Confidence            9999998653                         388999999999999999995 56788899999999999863   


Q ss_pred             -----------CeEEEEeecCCCCCeE---------EEEEcCCCcccCCCeEEEE
Q psy8430         303 -----------GTILQSLTGHDEEPHI---------LCVSSYYSKVSCDLFQRIQ  337 (361)
Q Consensus       303 -----------~~~~~~~~~h~~~v~~---------~~~s~s~~~v~~dg~i~iW  337 (361)
                                 .+.+....||...|..         .++|.+     .|+.+.||
T Consensus       352 eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~Sva-----eDN~LqIW  401 (422)
T KOG0264|consen  352 EQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVA-----EDNILQIW  401 (422)
T ss_pred             ccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEec-----CCceEEEe
Confidence                       1345667789988887         677777     99999999

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.87  E-value=9.8e-20  Score=157.81  Aligned_cols=189  Identities=29%  Similarity=0.465  Sum_probs=152.9

Q ss_pred             ceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCE
Q psy8430         138 SKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL  217 (361)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~  217 (361)
                      +..+..|...  ..+.+..+.+|...|.++.|++++.++++++.|+.|.+||+.+++....+..|...|.+++|+|++.+
T Consensus        72 ~~~i~i~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  149 (289)
T cd00200          72 DKTIRLWDLE--TGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTF  149 (289)
T ss_pred             CCeEEEEEcC--cccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCE
Confidence            3444444443  33567778899999999999999889999888999999999989988889899999999999999888


Q ss_pred             EEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy8430         218 VLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANL  297 (361)
Q Consensus       218 l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~i  297 (361)
                      +++++.|+.+++||++.+                          .+...+..|...+.++.|+|+++.+++++.|+.|++
T Consensus       150 l~~~~~~~~i~i~d~~~~--------------------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i  203 (289)
T cd00200         150 VASSSQDGTIKLWDLRTG--------------------------KCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKL  203 (289)
T ss_pred             EEEEcCCCcEEEEEcccc--------------------------ccceeEecCccccceEEECCCcCEEEEecCCCcEEE
Confidence            888888999999998754                          245566688889999999999999999999999999


Q ss_pred             eeCCCCeEEEEeecCCCCCeEEEEEcC--CCccc-CCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430         298 FDVETGTILQSLTGHDEEPHILCVSSY--YSKVS-CDLFQRIQHLDCGTSENPIHSVCVFQDIQST  360 (361)
Q Consensus       298 wd~~~~~~~~~~~~h~~~v~~~~~s~s--~~~v~-~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~  360 (361)
                      ||+++++.+..+..|...+.++.++..  ++..+ .||.|++|  |.   +. ...+..+.+|...
T Consensus       204 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~--~~---~~-~~~~~~~~~~~~~  263 (289)
T cd00200         204 WDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVW--DL---RT-GECVQTLSGHTNS  263 (289)
T ss_pred             EECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEE--Ec---CC-ceeEEEccccCCc
Confidence            999999999988888888887555543  11112 59999999  76   32 3456666677643

>KOG0275|consensus

Probab=99.87  E-value=5.4e-22  Score=163.38  Aligned_cols=185  Identities=22%  Similarity=0.293  Sum_probs=148.4

Q ss_pred             eeeccceeEEeeecCccce------eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe-CCCCC
Q psy8430         133 LKVQTSKIVSSFKTSLLSC------YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGS  205 (361)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~------~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~-~h~~~  205 (361)
                      ..++.+..+.+|..-..+.      +....+--|..+|.|++|+.|...+++|+.||.|++|.+.+|.|++.|. .|...
T Consensus       229 vsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkG  308 (508)
T KOG0275|consen  229 VSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKG  308 (508)
T ss_pred             eeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhhhhhccC
Confidence            3455556666666543222      1222333478999999999999999999999999999999999999997 89999


Q ss_pred             eEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCE
Q psy8430         206 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQ  285 (361)
Q Consensus       206 v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  285 (361)
                      |+|+.|+.++..+++++.|.++++..+.++                          ++++.+.||++.|+...|.++|.+
T Consensus       309 vt~l~FSrD~SqiLS~sfD~tvRiHGlKSG--------------------------K~LKEfrGHsSyvn~a~ft~dG~~  362 (508)
T KOG0275|consen  309 VTCLSFSRDNSQILSASFDQTVRIHGLKSG--------------------------KCLKEFRGHSSYVNEATFTDDGHH  362 (508)
T ss_pred             eeEEEEccCcchhhcccccceEEEeccccc--------------------------hhHHHhcCccccccceEEcCCCCe
Confidence            999999999999999999999999988776                          478899999999999999999999


Q ss_pred             EEEEeCCCcEEEeeCCCCeEEEEeecC--CCCCeE---------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeee
Q psy8430         286 VITASWDRVANLFDVETGTILQSLTGH--DEEPHI---------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVF  354 (361)
Q Consensus       286 l~s~~~d~~v~iwd~~~~~~~~~~~~h--~~~v~~---------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~  354 (361)
                      +++++.||+|++|+..+++|+.+++..  .-+|..         .++.+.     ..++|.|-  ++     .++.|..|
T Consensus       363 iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCN-----rsntv~im--n~-----qGQvVrsf  430 (508)
T KOG0275|consen  363 IISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCN-----RSNTVYIM--NM-----QGQVVRSF  430 (508)
T ss_pred             EEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEc-----CCCeEEEE--ec-----cceEEeee
Confidence            999999999999999999999998753  334444         334445     66777777  43     23555555


Q ss_pred             c
Q psy8430         355 Q  355 (361)
Q Consensus       355 ~  355 (361)
                      .
T Consensus       431 s  431 (508)
T KOG0275|consen  431 S  431 (508)
T ss_pred             c
Confidence            3

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.86  E-value=9.7e-20  Score=180.18  Aligned_cols=159  Identities=20%  Similarity=0.311  Sum_probs=136.6

Q ss_pred             cceeeeEEeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec-CCCEEEEEECCCc
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKS  226 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~  226 (361)
                      .+++.+..+.+|.+.|++++|+| ++.+|++|+.|++|++||+.++..+..+.. ...|.++.|++ ++..|++|+.||.
T Consensus       563 ~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~-~~~v~~v~~~~~~g~~latgs~dg~  641 (793)
T PLN00181        563 ARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT-KANICCVQFPSESGRSLAFGSADHK  641 (793)
T ss_pred             CCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEec-CCCeEEEEEeCCCCCEEEEEeCCCe
Confidence            45677888999999999999997 788999999999999999999998888874 46899999964 7899999999999


Q ss_pred             EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC---
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG---  303 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~---  303 (361)
                      |++||++...                         .+...+.+|...|.++.|. ++.++++++.|++|++||++++   
T Consensus       642 I~iwD~~~~~-------------------------~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~  695 (793)
T PLN00181        642 VYYYDLRNPK-------------------------LPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISG  695 (793)
T ss_pred             EEEEECCCCC-------------------------ccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccc
Confidence            9999987542                         1456677899999999997 7889999999999999999853   


Q ss_pred             ---eEEEEeecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         304 ---TILQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       304 ---~~~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                         .++.++.+|...+..        ++++|+     .||.|++|  +.
T Consensus       696 ~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs-----~D~~v~iw--~~  737 (793)
T PLN00181        696 INETPLHSFMGHTNVKNFVGLSVSDGYIATGS-----ETNEVFVY--HK  737 (793)
T ss_pred             cCCcceEEEcCCCCCeeEEEEcCCCCEEEEEe-----CCCEEEEE--EC
Confidence               577889999887766        566666     99999999  54

>KOG0283|consensus

Probab=99.86  E-value=3.5e-21  Score=176.63  Aligned_cols=158  Identities=20%  Similarity=0.382  Sum_probs=129.9

Q ss_pred             eeEEee-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC---------------------------------------
Q psy8430         153 KIRSFS-GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT---------------------------------------  192 (361)
Q Consensus       153 ~~~~l~-~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~---------------------------------------  192 (361)
                      ..+.+. .|.++|+++.|++||.|||+||.|+.|+||.+..                                       
T Consensus       258 ~~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s  337 (712)
T KOG0283|consen  258 VVQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTS  337 (712)
T ss_pred             EeeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccc
Confidence            345556 8999999999999999999999999999998753                                       


Q ss_pred             ---------------------CeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCC
Q psy8430         193 ---------------------GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESK  251 (361)
Q Consensus       193 ---------------------~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~  251 (361)
                                           .+++..|.||.+.|.++.|+. .++|++++.|++|+||++...                
T Consensus       338 ~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSK-n~fLLSSSMDKTVRLWh~~~~----------------  400 (712)
T KOG0283|consen  338 SSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSK-NNFLLSSSMDKTVRLWHPGRK----------------  400 (712)
T ss_pred             ccccccCCccccCCCccccccccchhhhhccchhheeccccc-CCeeEeccccccEEeecCCCc----------------
Confidence                                 012344679999999999985 578999999999999998654                


Q ss_pred             CCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCCc---
Q psy8430         252 EPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSK---  327 (361)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~~---  327 (361)
                                .+++.+ .|...|++++|+| |.+|+++|+-|+.++||++...+.+ -|..-...|+++++++.+.+   
T Consensus       401 ----------~CL~~F-~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv-~W~Dl~~lITAvcy~PdGk~avI  468 (712)
T KOG0283|consen  401 ----------ECLKVF-SHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVV-DWNDLRDLITAVCYSPDGKGAVI  468 (712)
T ss_pred             ----------ceeeEE-ecCCeeEEEEecccCCCcEeecccccceEEeecCcCeeE-eehhhhhhheeEEeccCCceEEE
Confidence                      356555 5999999999999 8899999999999999999865544 45555588888888877432   


Q ss_pred             ccCCCeEEEEcCCC
Q psy8430         328 VSCDLFQRIQHLDC  341 (361)
Q Consensus       328 v~~dg~i~iW~~d~  341 (361)
                      .+.+|..++|  ++
T Consensus       469 Gt~~G~C~fY--~t  480 (712)
T KOG0283|consen  469 GTFNGYCRFY--DT  480 (712)
T ss_pred             EEeccEEEEE--Ec
Confidence            2589999999  77

>KOG0306|consensus

Probab=99.86  E-value=3.1e-21  Score=174.54  Aligned_cols=172  Identities=20%  Similarity=0.296  Sum_probs=149.2

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC-----Ce--EE------EEEeCCCCCeEEEEEecCCCEE
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-----GK--CV------LQYSGHSGSVNSVRFLPNKDLV  218 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~-----~~--~~------~~~~~h~~~v~~v~~~~~~~~l  218 (361)
                      .++.++..|.+.|++++.+||+..+++||.|.+|++||+.-     |.  .+      .++. -...|.|++++|++++|
T Consensus       445 ~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLe-l~ddvL~v~~Spdgk~L  523 (888)
T KOG0306|consen  445 SLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLE-LEDDVLCVSVSPDGKLL  523 (888)
T ss_pred             hhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEe-ccccEEEEEEcCCCcEE
Confidence            46677789999999999999999999999999999999741     21  11      2222 45789999999999999


Q ss_pred             EEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEe
Q psy8430         219 LSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLF  298 (361)
Q Consensus       219 ~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iw  298 (361)
                      +.+-.|.++++|=+.+-                          +....+-||.-||.+|.++||++.++|||.|..|+||
T Consensus       524 aVsLLdnTVkVyflDtl--------------------------KFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiW  577 (888)
T KOG0306|consen  524 AVSLLDNTVKVYFLDTL--------------------------KFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIW  577 (888)
T ss_pred             EEEeccCeEEEEEecce--------------------------eeeeeecccccceeEEeccCCcCeEEeccCCCceEEe
Confidence            99999999999966543                          3667788999999999999999999999999999999


Q ss_pred             eCCCCeEEEEeecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         299 DVETGTILQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       299 d~~~~~~~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      -+.-|.|-+++.+|...|.+        ++||++     .|+.|+-|  |.   .+ ..+++++.||++.|
T Consensus       578 GLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~g-----KD~kvKqW--Dg---~k-Fe~iq~L~~H~~ev  637 (888)
T KOG0306|consen  578 GLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCG-----KDGKVKQW--DG---EK-FEEIQKLDGHHSEV  637 (888)
T ss_pred             ccccchhhhhhhcccCceeEEEEcccceeEEEec-----CcceEEee--ch---hh-hhhheeeccchhee
Confidence            99999999999999999888        788888     99999999  87   44 77899999998754

>KOG0310|consensus

Probab=99.86  E-value=9.8e-21  Score=163.64  Aligned_cols=176  Identities=25%  Similarity=0.311  Sum_probs=139.3

Q ss_pred             eccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec
Q psy8430         135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP  213 (361)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~  213 (361)
                      +.....+++|.  ..+-..++.+.+|+.+|..+.|+|. +..|++|+.|+.+++||+.+......+.+|.+.|.|.+|+|
T Consensus        86 GD~sG~V~vfD--~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~  163 (487)
T KOG0310|consen   86 GDESGHVKVFD--MKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISP  163 (487)
T ss_pred             cCCcCcEEEec--cccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeecccc
Confidence            33444556666  3334567888999999999999995 55888999999999999998887778899999999999999


Q ss_pred             C-CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy8430         214 N-KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD  292 (361)
Q Consensus       214 ~-~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d  292 (361)
                      . +.+++||+.||+|++||++...                         ..+..+ .|..+|.++.+-|.|..+++++. 
T Consensus       164 ~~~hivvtGsYDg~vrl~DtR~~~-------------------------~~v~el-nhg~pVe~vl~lpsgs~iasAgG-  216 (487)
T KOG0310|consen  164 ANDHIVVTGSYDGKVRLWDTRSLT-------------------------SRVVEL-NHGCPVESVLALPSGSLIASAGG-  216 (487)
T ss_pred             CCCeEEEecCCCceEEEEEeccCC-------------------------ceeEEe-cCCCceeeEEEcCCCCEEEEcCC-
Confidence            5 5689999999999999998641                         133344 69999999999999999999875 


Q ss_pred             CcEEEeeCCCCeEE-EEeecCCCCCeEEEEEcC---CCcccCCCeEEEEcCCC
Q psy8430         293 RVANLFDVETGTIL-QSLTGHDEEPHILCVSSY---YSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       293 ~~v~iwd~~~~~~~-~~~~~h~~~v~~~~~s~s---~~~v~~dg~i~iW~~d~  341 (361)
                      +.|++||+-+|... ..+..|...|+|+.+...   ..+.+-|+.|++|  |+
T Consensus       217 n~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVf--d~  267 (487)
T KOG0310|consen  217 NSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVF--DT  267 (487)
T ss_pred             CeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEE--Ec
Confidence            77999999966544 445559999999544432   1223489999999  75

>KOG1407|consensus

Probab=99.86  E-value=2.5e-20  Score=149.24  Aligned_cols=201  Identities=20%  Similarity=0.299  Sum_probs=155.2

Q ss_pred             ceeEEeeecCccceeeeEEeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC
Q psy8430         138 SKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD  216 (361)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~  216 (361)
                      +..+.+|..+..+....-...+|.+.|-.++|+| ....|++++.|.+|++||++.++++....... .-..+.|+|+|.
T Consensus        41 dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~~-eni~i~wsp~g~  119 (313)
T KOG1407|consen   41 DKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIETKG-ENINITWSPDGE  119 (313)
T ss_pred             CCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeeccC-cceEEEEcCCCC
Confidence            3334444443333334445679999999999998 45599999999999999999999999988544 445578999999


Q ss_pred             EEEEEECCCcEEEEeccccccccCCCCCCCCCC--CCCC-------------CCCceecccccEEEeCCCCcEEEEEEcC
Q psy8430         217 LVLSASGDKSVHIWQAVINWECLNNDNDSDLDE--SKEP-------------DESSITLRTPVKELLGHSNVVIAADWLS  281 (361)
Q Consensus       217 ~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~--~~~~-------------~~~~~~~~~~~~~~~~~~~~v~~~~~~~  281 (361)
                      +++.++.|..|.+.|.++.+.........+...  +...             ....++.-+|+..+..|...+.++.|+|
T Consensus       120 ~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p  199 (313)
T KOG1407|consen  120 YIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDP  199 (313)
T ss_pred             EEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECC
Confidence            999999999999999987765443222221111  1000             1112344568888999999999999999


Q ss_pred             CCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCC
Q psy8430         282 DGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSEN  346 (361)
Q Consensus       282 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~  346 (361)
                      +|+|+++|+.|..+-+||+...-|++.+..+.-+|..        +++++|     .|..|-|=  ++.||++
T Consensus       200 ~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaS-----EDh~IDIA--~vetGd~  265 (313)
T KOG1407|consen  200 DGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASAS-----EDHFIDIA--EVETGDR  265 (313)
T ss_pred             CCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccC-----ccceEEeE--ecccCCe
Confidence            9999999999999999999999999999999999888        677777     99999888  7777766

>KOG0640|consensus

Probab=99.86  E-value=2.8e-21  Score=158.29  Aligned_cols=170  Identities=19%  Similarity=0.267  Sum_probs=139.4

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe---EEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEE
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK---CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  228 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~---~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~  228 (361)
                      ..|++|-+|...|+++.|+|...+|++|+.|++|++||+....   ....|+ ...+|.++.|+|.|.+++.|..--+++
T Consensus       163 PvIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~q-d~~~vrsiSfHPsGefllvgTdHp~~r  241 (430)
T KOG0640|consen  163 PVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQ-DTEPVRSISFHPSGEFLLVGTDHPTLR  241 (430)
T ss_pred             ceEeehhhccCcccceeecchhheEEeccCCCeEEEEecccHHHHHHHHHhh-ccceeeeEeecCCCceEEEecCCCcee
Confidence            6899999999999999999999999999999999999997542   223333 567999999999999999999999999


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEE
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS  308 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~  308 (361)
                      +||+.+-++-.                       +...-.+|.+.|+++.+++.|+..++++.||.|++||--+++|+.+
T Consensus       242 lYdv~T~Qcfv-----------------------sanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t  298 (430)
T KOG0640|consen  242 LYDVNTYQCFV-----------------------SANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRT  298 (430)
T ss_pred             EEeccceeEee-----------------------ecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHH
Confidence            99998764321                       1112346899999999999999999999999999999999999999


Q ss_pred             ee-cCCCC-CeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecc
Q psy8430         309 LT-GHDEE-PHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQD  356 (361)
Q Consensus       309 ~~-~h~~~-v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~  356 (361)
                      +. +|.+. |.+        ++.|.+     .|..+++|  +++|+|.    +.++.|
T Consensus       299 ~~~AH~gsevcSa~Ftkn~kyiLsSG-----~DS~vkLW--Ei~t~R~----l~~YtG  345 (430)
T KOG0640|consen  299 IGNAHGGSEVCSAVFTKNGKYILSSG-----KDSTVKLW--EISTGRM----LKEYTG  345 (430)
T ss_pred             HHhhcCCceeeeEEEccCCeEEeecC-----Ccceeeee--eecCCce----EEEEec
Confidence            86 46554 444        455555     99999999  8866655    555544

>KOG0650|consensus

Probab=99.86  E-value=1.1e-20  Score=167.00  Aligned_cols=245  Identities=23%  Similarity=0.328  Sum_probs=181.0

Q ss_pred             hHHHHHHHHhhccccccccccCCCCCCchhhhcccc---CcccccccccCCCccccceeeeeeeccceeEEeeecCccce
Q psy8430          75 LQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNK---NFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSC  151 (361)
Q Consensus        75 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (361)
                      +.+++..|+..+++.+.+.++|.+|+++++++..++   ++++..+.+..|.+...++              |..     
T Consensus       330 ~P~ky~sLR~VPaY~r~irErFeRcLDLYL~PR~rK~rlniDpe~LiPkLPsp~dLrP--------------FPt-----  390 (733)
T KOG0650|consen  330 IPQKYKSLRKVPAYERSIRERFERCLDLYLAPRVRKMRLNIDPESLIPKLPSPKDLRP--------------FPT-----  390 (733)
T ss_pred             ccccchhhhcchhHHHHHHHHHHHhHHhhhCcccccceecCCHHHhcccCCChhhcCC--------------Ccc-----
Confidence            789999999999999999999999999999999887   7788888888888887776              222     


Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCE-EEEEECCCcEEEE
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL-VLSASGDKSVHIW  230 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~~~d~~i~lw  230 (361)
                      .+-..+.||++.|.||..+|.|.+|++|+.||+|+||.+.+|+|+.++. ..+.|.||+|+|.+.. ++.++.+..+.|-
T Consensus       391 ~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~~~iv  469 (733)
T KOG0650|consen  391 RCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGECVLIV  469 (733)
T ss_pred             eeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEecCceEEe
Confidence            3344577999999999999999999999999999999999999999998 6789999999997764 4445555557777


Q ss_pred             eccccccccCCCCCCCCCCC---CCCCCC--ce------ecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC---CcEE
Q psy8430         231 QAVINWECLNNDNDSDLDES---KEPDES--SI------TLRTPVKELLGHSNVVIAADWLSDGEQVITASWD---RVAN  296 (361)
Q Consensus       231 d~~~~~~~~~~~~~~~~~~~---~~~~~~--~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~v~  296 (361)
                      +..-+..+........+...   ..+...  .+      .....+.....|...|..+.||..|.||++...+   ..|.
T Consensus       470 np~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~Vl  549 (733)
T KOG0650|consen  470 NPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVL  549 (733)
T ss_pred             CccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEE
Confidence            76655332221111111100   111000  00      0111244556789999999999999999998764   4588


Q ss_pred             EeeCCCCeEEEEeecCCCCCeEEEEEcC--CCcccCCCeEEEEcCCC
Q psy8430         297 LFDVETGTILQSLTGHDEEPHILCVSSY--YSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       297 iwd~~~~~~~~~~~~h~~~v~~~~~s~s--~~~v~~dg~i~iW~~d~  341 (361)
                      |.++..+.....+.-..+.+.+..|-++  +.+|+.-..|+||  |+
T Consensus       550 iHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~~vRiY--dL  594 (733)
T KOG0650|consen  550 IHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQRSVRIY--DL  594 (733)
T ss_pred             EEecccccccCchhhcCCceeEEEecCCCceEEEEeccceEEE--eh
Confidence            9998876665555545556666566555  5566677899999  76

>KOG0643|consensus

Probab=99.86  E-value=6e-20  Score=147.57  Aligned_cols=161  Identities=25%  Similarity=0.322  Sum_probs=106.3

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC-----
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-----  223 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-----  223 (361)
                      .+++.+.++.||+++|||++.+.+...+++|+.|.++++||+++|+.+.+++ ...+|..+.|+++|++++.+..     
T Consensus        40 ~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~  118 (327)
T KOG0643|consen   40 LNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGY  118 (327)
T ss_pred             cCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCc
Confidence            4668889999999999999999999999999999999999999998877665 4455555555555555443322     


Q ss_pred             CCcEEEEeccc-------cccccCCCCC-CCCCC--CCC---------CC--CCceecc---cccEEEeCCCCcEEEEEE
Q psy8430         224 DKSVHIWQAVI-------NWECLNNDND-SDLDE--SKE---------PD--ESSITLR---TPVKELLGHSNVVIAADW  279 (361)
Q Consensus       224 d~~i~lwd~~~-------~~~~~~~~~~-~~~~~--~~~---------~~--~~~~~~~---~~~~~~~~~~~~v~~~~~  279 (361)
                      -+.|.++|++.       ..+....... +....  +..         .+  ...+...   ..+.....|...|+.+.+
T Consensus       119 ~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~  198 (327)
T KOG0643|consen  119 TCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQF  198 (327)
T ss_pred             ceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccc
Confidence            23445555441       1111110000 00000  000         00  0000000   123344568889999999


Q ss_pred             cCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430         280 LSDGEQVITASWDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       280 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~  310 (361)
                      +|+..++++++.|.+.++||+++.++++++.
T Consensus       199 s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~  229 (327)
T KOG0643|consen  199 SRDRTYFITGSKDTTAKLVDVRTLEVLKTYT  229 (327)
T ss_pred             cCCcceEEecccCccceeeeccceeeEEEee
Confidence            9999999999999999999999877766664

>KOG0308|consensus

Probab=99.85  E-value=2.1e-20  Score=166.76  Aligned_cols=181  Identities=20%  Similarity=0.277  Sum_probs=150.4

Q ss_pred             eccceeEEeeecCccceeeeEEeeccCCCeEEEEE-cCCCCEEEEEeCCCcEEEEeCCCCe--EEEE--------Ee-CC
Q psy8430         135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAV-RPGQPVLGSASADRTVRLWSTQTGK--CVLQ--------YS-GH  202 (361)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~-~~~~~~l~s~s~d~~i~~wd~~~~~--~~~~--------~~-~h  202 (361)
                      .+.+..+..|.......-++.++..|...|.|++. .++..++|+||-|+.|.+||++++.  .+..        +. |+
T Consensus        91 ~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~  170 (735)
T KOG0308|consen   91 ASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGP  170 (735)
T ss_pred             ecCCceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCC
Confidence            34444455555555445677888999999999999 7788899999999999999999772  2222        22 78


Q ss_pred             CCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC
Q psy8430         203 SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD  282 (361)
Q Consensus       203 ~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  282 (361)
                      ..+|.+++.++.|..+++|+..+.+++||.++..                          .+..+.||...|..+-.+++
T Consensus       171 k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~--------------------------kimkLrGHTdNVr~ll~~dD  224 (735)
T KOG0308|consen  171 KDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCK--------------------------KIMKLRGHTDNVRVLLVNDD  224 (735)
T ss_pred             ccceeeeecCCcceEEEecCcccceEEecccccc--------------------------ceeeeeccccceEEEEEcCC
Confidence            8999999999999999999999999999998773                          56778899999999999999


Q ss_pred             CCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCC
Q psy8430         283 GEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGT  343 (361)
Q Consensus       283 ~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~  343 (361)
                      |..+++++.||+|++||+...+|+.++..|...|.++..+.+|.   +.+.||.|..=  |+++
T Consensus       225 Gt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~T--dl~n  286 (735)
T KOG0308|consen  225 GTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRT--DLRN  286 (735)
T ss_pred             CCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEec--ccCC
Confidence            99999999999999999999999999999999999855544432   22499998887  8844

>KOG1446|consensus

Probab=99.85  E-value=1.7e-19  Score=148.41  Aligned_cols=175  Identities=19%  Similarity=0.255  Sum_probs=141.5

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEE
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  228 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~  228 (361)
                      .+.+.++.+.||...|++|+.+|-+..++|++.|++|++||++..++...+..  ..-..++|.|.|-++|++.....|+
T Consensus        88 ~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~--~~~pi~AfDp~GLifA~~~~~~~Ik  165 (311)
T KOG1446|consen   88 HDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNL--SGRPIAAFDPEGLIFALANGSELIK  165 (311)
T ss_pred             ecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEec--CCCcceeECCCCcEEEEecCCCeEE
Confidence            55688999999999999999999999999999999999999998887766653  3334568999999999999888999


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe---CCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL---GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI  305 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~  305 (361)
                      +||++.-..                        .|...+.   +.....+.+.|+|+|++++.++..+.+++.|.-+|..
T Consensus       166 LyD~Rs~dk------------------------gPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~  221 (311)
T KOG1446|consen  166 LYDLRSFDK------------------------GPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTV  221 (311)
T ss_pred             EEEecccCC------------------------CCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcE
Confidence            999985422                        1333332   4467889999999999999999999999999999999


Q ss_pred             EEEeecCCCCC----eE-------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecc-cccC
Q psy8430         306 LQSLTGHDEEP----HI-------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQD-IQST  360 (361)
Q Consensus       306 ~~~~~~h~~~v----~~-------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~-h~~~  360 (361)
                      +.++..+...-    .+       ++++++     .||+|.+|  ++.+    +..|.+++| |.++
T Consensus       222 ~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs-----~dg~i~vw--~~~t----g~~v~~~~~~~~~~  277 (311)
T KOG1446|consen  222 KSTFSGYPNAGNLPLSATFTPDSKFVLSGS-----DDGTIHVW--NLET----GKKVAVLRGPNGGP  277 (311)
T ss_pred             eeeEeeccCCCCcceeEEECCCCcEEEEec-----CCCcEEEE--EcCC----CcEeeEecCCCCCC
Confidence            99998876544    22       667777     99999999  6633    455788877 4443

>KOG0772|consensus

Probab=99.85  E-value=1.2e-20  Score=164.08  Aligned_cols=178  Identities=20%  Similarity=0.246  Sum_probs=134.1

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC---------------------------CeEE--------
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT---------------------------GKCV--------  196 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~---------------------------~~~~--------  196 (361)
                      .....|++|+..|+++++.|.|-.|++||.|.+|++||+..                           |..+        
T Consensus       158 shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aq  237 (641)
T KOG0772|consen  158 SHEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQ  237 (641)
T ss_pred             cceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcc
Confidence            34567889999999999999999999999999999999861                           1111        


Q ss_pred             -----------E-------------EEeCCCCCeEEEEEecCC-CEEEEEECCCcEEEEeccccccccCCCCCCCCCCCC
Q psy8430         197 -----------L-------------QYSGHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESK  251 (361)
Q Consensus       197 -----------~-------------~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~  251 (361)
                                 .             .-+||...++|.+|+|.. ..|+|++.||++++||+...+.-.            
T Consensus       238 akl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~------------  305 (641)
T KOG0772|consen  238 AKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQL------------  305 (641)
T ss_pred             eeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhhe------------
Confidence                       0             124788999999999964 469999999999999987653211            


Q ss_pred             CCCCCceecccccEE--EeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE---EEEeecCCC--CCeEEEEEcC
Q psy8430         252 EPDESSITLRTPVKE--LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI---LQSLTGHDE--EPHILCVSSY  324 (361)
Q Consensus       252 ~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~---~~~~~~h~~--~v~~~~~s~s  324 (361)
                                +.++.  ..+..-++++++|+|+|++|++|+.||+|.+||..+...   ...-.+|..  .|+++.||..
T Consensus       306 ----------qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~d  375 (641)
T KOG0772|consen  306 ----------QVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYD  375 (641)
T ss_pred             ----------eEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccc
Confidence                      01111  123456899999999999999999999999999764322   223356876  8888888777


Q ss_pred             CCcc---cCCCeEEEEcCCCCCCCCcceeeeeecc
Q psy8430         325 YSKV---SCDLFQRIQHLDCGTSENPIHSVCVFQD  356 (361)
Q Consensus       325 ~~~v---~~dg~i~iW~~d~~~~~~~~~~v~~~~~  356 (361)
                      +.++   +.|+++++|  |+   |+..+++.++.|
T Consensus       376 g~~LlSRg~D~tLKvW--DL---rq~kkpL~~~tg  405 (641)
T KOG0772|consen  376 GNYLLSRGFDDTLKVW--DL---RQFKKPLNVRTG  405 (641)
T ss_pred             cchhhhccCCCceeee--ec---cccccchhhhcC
Confidence            4443   689999999  99   776666665544

>KOG0310|consensus

Probab=99.84  E-value=7.1e-21  Score=164.49  Aligned_cols=168  Identities=21%  Similarity=0.302  Sum_probs=137.0

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCC-CEEEEEECCCcEE
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK-DLVLSASGDKSVH  228 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~i~  228 (361)
                      ++...+++.-....|++++|..||.+|++|...|.|++||..+...++.+.+|..+|..+.|+|++ ..|++|+.|+.++
T Consensus        57 ~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k  136 (487)
T KOG0310|consen   57 TRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVK  136 (487)
T ss_pred             hhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEE
Confidence            344555666778999999999999999999999999999977766778889999999999999955 5678888899999


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEeeCCCC-eEE
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD-GEQVITASWDRVANLFDVETG-TIL  306 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~v~iwd~~~~-~~~  306 (361)
                      +||+.+..                          ....+.+|...|.+.+|+|. +..+++|++||.|++||.++. ..+
T Consensus       137 ~~d~s~a~--------------------------v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v  190 (487)
T KOG0310|consen  137 YWDLSTAY--------------------------VQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRV  190 (487)
T ss_pred             EEEcCCcE--------------------------EEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCcee
Confidence            99997651                          34578899999999999995 558899999999999999976 555


Q ss_pred             EEeecCCCCCeEEEEEcCCC--cccCCCeEEEEcCCCCCCCC
Q psy8430         307 QSLTGHDEEPHILCVSSYYS--KVSCDLFQRIQHLDCGTSEN  346 (361)
Q Consensus       307 ~~~~~h~~~v~~~~~s~s~~--~v~~dg~i~iW~~d~~~~~~  346 (361)
                      ..+. |..+|..+++-+++.  ..+....|+||  |+-+|+.
T Consensus       191 ~eln-hg~pVe~vl~lpsgs~iasAgGn~vkVW--Dl~~G~q  229 (487)
T KOG0310|consen  191 VELN-HGCPVESVLALPSGSLIASAGGNSVKVW--DLTTGGQ  229 (487)
T ss_pred             EEec-CCCceeeEEEcCCCCEEEEcCCCeEEEE--EecCCce
Confidence            5554 888888866655522  33467899999  8855544

>KOG0302|consensus

Probab=99.84  E-value=2.3e-20  Score=156.55  Aligned_cols=169  Identities=18%  Similarity=0.270  Sum_probs=137.5

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCeE---EEEEeCCCCCeEEEEEecC-CCEEEEEEC
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKC---VLQYSGHSGSVNSVRFLPN-KDLVLSASG  223 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~~~~---~~~~~~h~~~v~~v~~~~~-~~~l~s~~~  223 (361)
                      ...+++.++.+|.+.=+.|+|||- -..|++|..-+.|++|...+|.-   ...|.+|..+|-.++|+|. ...|++||.
T Consensus       199 s~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~  278 (440)
T KOG0302|consen  199 SEFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSC  278 (440)
T ss_pred             cccCceEEecccCccceeeecccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeec
Confidence            445789999999999999999993 23688998889999999988732   2346689999999999994 568999999


Q ss_pred             CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC-
Q psy8430         224 DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET-  302 (361)
Q Consensus       224 d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~-  302 (361)
                      ||+|+|||++.+..                        ++......|.+-|+.++|+..-.+|++|+.||+++|||+++ 
T Consensus       279 DgsIrIWDiRs~~~------------------------~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~  334 (440)
T KOG0302|consen  279 DGSIRIWDIRSGPK------------------------KAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQF  334 (440)
T ss_pred             CceEEEEEecCCCc------------------------cceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhc
Confidence            99999999987632                        12233378999999999999888999999999999999984 


Q ss_pred             --CeEEEEeecCCCCCeEEEEEcC----CCcccCCCeEEEEcCCC
Q psy8430         303 --GTILQSLTGHDEEPHILCVSSY----YSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       303 --~~~~~~~~~h~~~v~~~~~s~s----~~~v~~dg~i~iW~~d~  341 (361)
                        ++++.+++-|..+|+++-+.+.    +...+.|..|.||||.+
T Consensus       335 ~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsv  379 (440)
T KOG0302|consen  335 KSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSV  379 (440)
T ss_pred             cCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeec
Confidence              6788999999999999544432    11234899999995554

>KOG0305|consensus

Probab=99.84  E-value=6.1e-20  Score=164.10  Aligned_cols=168  Identities=23%  Similarity=0.227  Sum_probs=142.3

Q ss_pred             ecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeC-CCCCeEEEEEecCCCEEEEEEC
Q psy8430         145 KTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG-HSGSVNSVRFLPNKDLVLSASG  223 (361)
Q Consensus       145 ~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~~~  223 (361)
                      .|...++........+...|+++.|+++|.+|+.|..+|.|.|||..+.+.+..+.+ |...|-+++|.  +..+.+|+.
T Consensus       201 lW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssGsr  278 (484)
T KOG0305|consen  201 LWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSGSR  278 (484)
T ss_pred             EEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEecc--CceEEEecC
Confidence            333344443443344489999999999999999999999999999999988999988 99999999997  778999999


Q ss_pred             CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC
Q psy8430         224 DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  303 (361)
Q Consensus       224 d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~  303 (361)
                      |+.|..+|++....                         ....+.+|...|..++|++++.++++|+.|+.+.|||....
T Consensus       279 ~~~I~~~dvR~~~~-------------------------~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~  333 (484)
T KOG0305|consen  279 DGKILNHDVRISQH-------------------------VVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSP  333 (484)
T ss_pred             CCcEEEEEEecchh-------------------------hhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCc
Confidence            99999999986632                         22247899999999999999999999999999999999888


Q ss_pred             eEEEEeecCCCCCeE---------EEEEcCCCcccCCCeEEEEcCCCCCC
Q psy8430         304 TILQSLTGHDEEPHI---------LCVSSYYSKVSCDLFQRIQHLDCGTS  344 (361)
Q Consensus       304 ~~~~~~~~h~~~v~~---------~~~s~s~~~v~~dg~i~iW~~d~~~~  344 (361)
                      +++..+..|...|.+         ++|+|+   .+.|+.|++|  |+.++
T Consensus       334 ~p~~~~~~H~aAVKA~awcP~q~~lLAsGG---Gs~D~~i~fw--n~~~g  378 (484)
T KOG0305|consen  334 EPKFTFTEHTAAVKALAWCPWQSGLLATGG---GSADRCIKFW--NTNTG  378 (484)
T ss_pred             cccEEEeccceeeeEeeeCCCccCceEEcC---CCcccEEEEE--EcCCC
Confidence            999999999999998         444443   3479999999  77554

>KOG0293|consensus

Probab=99.83  E-value=3e-20  Score=157.56  Aligned_cols=136  Identities=24%  Similarity=0.353  Sum_probs=114.2

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC---eEEEEEeCCCCCeEEEEEecCCCEEEEEECCC
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG---KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK  225 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~---~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~  225 (361)
                      ..++..+.+..|+..|+-+.|+++|.+||+++.|.+..+|++...   +...++.+|..+|.-+.|+||.+++++|+.|.
T Consensus       212 ip~qt~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e  291 (519)
T KOG0293|consen  212 IPSQTWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDE  291 (519)
T ss_pred             CCchhhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchH
Confidence            445677888899999999999999999999999999999998554   45778889999999999999999999999999


Q ss_pred             cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE
Q psy8430         226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI  305 (361)
Q Consensus       226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~  305 (361)
                      .+.+||+.++.....                         --.++...+.+++|.|||..+++|+.|+.+..||+. |..
T Consensus       292 ~~~lwDv~tgd~~~~-------------------------y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD-gn~  345 (519)
T KOG0293|consen  292 VLSLWDVDTGDLRHL-------------------------YPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD-GNI  345 (519)
T ss_pred             heeeccCCcchhhhh-------------------------cccCcCCCcceeEEccCCceeEecCCCCcEEEecCC-cch
Confidence            999999988743211                         112356789999999999999999999999999986 443


Q ss_pred             EEEee
Q psy8430         306 LQSLT  310 (361)
Q Consensus       306 ~~~~~  310 (361)
                      ...|.
T Consensus       346 ~~~W~  350 (519)
T KOG0293|consen  346 LGNWE  350 (519)
T ss_pred             hhccc
Confidence            44443

>KOG0641|consensus

Probab=99.83  E-value=6e-19  Score=138.64  Aligned_cols=162  Identities=19%  Similarity=0.297  Sum_probs=119.2

Q ss_pred             EEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-----------------------------------------
Q psy8430         155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-----------------------------------------  193 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~-----------------------------------------  193 (361)
                      +.-+.|++.|+|.+|+|+|.+|++|+.|.+|++.-++..                                         
T Consensus        83 kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagd  162 (350)
T KOG0641|consen   83 KRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGD  162 (350)
T ss_pred             eeccccCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCc
Confidence            344579999999999999999999999999998655321                                         


Q ss_pred             -----------eEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceeccc
Q psy8430         194 -----------KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRT  262 (361)
Q Consensus       194 -----------~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (361)
                                 +..+.+.+|.+-|.++ ++=++-+|++|+.|.+|++||++-+..+...                     
T Consensus       163 c~iy~tdc~~g~~~~a~sghtghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l---------------------  220 (350)
T KOG0641|consen  163 CKIYITDCGRGQGFHALSGHTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTL---------------------  220 (350)
T ss_pred             ceEEEeecCCCCcceeecCCcccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeec---------------------
Confidence                       1112233455544443 1224667899999999999999865332110                     


Q ss_pred             ccEEEeC---CCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCCc---ccCCCeEEE
Q psy8430         263 PVKELLG---HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSK---VSCDLFQRI  336 (361)
Q Consensus       263 ~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~~---v~~dg~i~i  336 (361)
                       -..+.+   .++.|.++++.|.|++|++|..|....+||++-++.++.+..|+..|.++-++++.-+   -++|..|++
T Consensus       221 -~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikl  299 (350)
T KOG0641|consen  221 -DNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKL  299 (350)
T ss_pred             -cCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEE
Confidence             001111   2468999999999999999999999999999999999999999999999544444111   239999999


Q ss_pred             EcCCC
Q psy8430         337 QHLDC  341 (361)
Q Consensus       337 W~~d~  341 (361)
                      =  |+
T Consensus       300 t--dl  302 (350)
T KOG0641|consen  300 T--DL  302 (350)
T ss_pred             e--ec
Confidence            9  66

>KOG0294|consensus

Probab=99.83  E-value=2.1e-19  Score=147.61  Aligned_cols=126  Identities=24%  Similarity=0.397  Sum_probs=113.1

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC--EEEEEECCCcEEE
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD--LVLSASGDKSVHI  229 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~--~l~s~~~d~~i~l  229 (361)
                      .++..+..|.++|++++.+  +.++++||.|-+|+|||+.....+..+-.|.+.|+++.|.+...  .|++|+.||.|.+
T Consensus        34 ~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~i  111 (362)
T KOG0294|consen   34 KPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIII  111 (362)
T ss_pred             eccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEE
Confidence            3456677999999999997  88999999999999999999888888888999999999998654  7999999999999


Q ss_pred             EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE
Q psy8430         230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI  305 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~  305 (361)
                      |+...                          +..+..+.+|.+.|+.+++||.|+..++.+.|+.+++||+-.|+.
T Consensus       112 w~~~~--------------------------W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~  161 (362)
T KOG0294|consen  112 WRVGS--------------------------WELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRV  161 (362)
T ss_pred             EEcCC--------------------------eEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCcc
Confidence            98742                          257889999999999999999999999999999999999877653

>KOG0278|consensus

Probab=99.83  E-value=1.4e-20  Score=149.85  Aligned_cols=136  Identities=26%  Similarity=0.460  Sum_probs=126.4

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEE
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  228 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~  228 (361)
                      .++.-+.+|.||+++|++.+.+.+...-++++.|-+.++||.-+|..++.|. |...|..++|+.+.++|++|+.++.++
T Consensus        47 ~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllr  125 (334)
T KOG0278|consen   47 DTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLR  125 (334)
T ss_pred             CCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhh
Confidence            5677899999999999999999999999999999999999999999999998 999999999999999999999999999


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEE
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS  308 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~  308 (361)
                      |||++...                         .+...+.+|.+.|..+.|....+.+++.+.|++||+||.++|..+++
T Consensus       126 vfdln~p~-------------------------App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~s  180 (334)
T KOG0278|consen  126 VFDLNRPK-------------------------APPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQS  180 (334)
T ss_pred             hhhccCCC-------------------------CCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEE
Confidence            99986542                         37788899999999999999899999999999999999999999988


Q ss_pred             ee
Q psy8430         309 LT  310 (361)
Q Consensus       309 ~~  310 (361)
                      +.
T Consensus       181 L~  182 (334)
T KOG0278|consen  181 LE  182 (334)
T ss_pred             Ee
Confidence            86

>KOG0299|consensus

Probab=99.83  E-value=1.5e-18  Score=149.28  Aligned_cols=155  Identities=25%  Similarity=0.347  Sum_probs=132.5

Q ss_pred             eccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecccccc
Q psy8430         158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE  237 (361)
Q Consensus       158 ~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~  237 (361)
                      ++|...|.+++.++||.+|++|+.|..|.||+.++.+.+..|.+|.+.|.+++|-.....+++++.|+++++|++...  
T Consensus       199 ~~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~--  276 (479)
T KOG0299|consen  199 KGHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQL--  276 (479)
T ss_pred             ccccceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHh--
Confidence            489999999999999999999999999999999999999999999999999999988889999999999999987643  


Q ss_pred             ccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCe
Q psy8430         238 CLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPH  317 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~  317 (361)
                                              ..+.++.||...|.++.-...++.+-.|+.|+++++|++. -+....+.+|.+.+.
T Consensus       277 ------------------------s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~-eesqlifrg~~~sid  331 (479)
T KOG0299|consen  277 ------------------------SYVETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIP-EESQLIFRGGEGSID  331 (479)
T ss_pred             ------------------------HHHHHHhCCccceeeechhcccceEEeccccceeEEEecc-ccceeeeeCCCCCee
Confidence                                    3567788999999999888777777777799999999994 455556778888888


Q ss_pred             EEEEEcC--CCcccCCCeEEEEcCCC
Q psy8430         318 ILCVSSY--YSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       318 ~~~~s~s--~~~v~~dg~i~iW~~d~  341 (361)
                      |+++..+  |...+.||.|.+|  ++
T Consensus       332 cv~~In~~HfvsGSdnG~IaLW--s~  355 (479)
T KOG0299|consen  332 CVAFINDEHFVSGSDNGSIALW--SL  355 (479)
T ss_pred             eEEEecccceeeccCCceEEEe--ee
Confidence            8433332  2222399999999  76

>KOG0302|consensus

Probab=99.83  E-value=6.1e-20  Score=154.04  Aligned_cols=123  Identities=24%  Similarity=0.477  Sum_probs=107.6

Q ss_pred             EEeeccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCC---eEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEE
Q psy8430         155 RSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQTG---KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  230 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~~-~~l~s~s~d~~i~~wd~~~~---~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lw  230 (361)
                      +.+.+|+..|-.|+|+|.. ..|+|||.||+|+|||++.+   .++ ..+.|.+-|+.|.|+....+|++|+.||+++||
T Consensus       251 ~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~-~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iw  329 (440)
T KOG0302|consen  251 RPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAV-STKAHNSDVNVISWNRREPLLASGGDDGTLSIW  329 (440)
T ss_pred             ccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCcccee-EeeccCCceeeEEccCCcceeeecCCCceEEEE
Confidence            4567899999999999954 49999999999999999988   333 347899999999999988899999999999999


Q ss_pred             eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEeeCC
Q psy8430         231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVE  301 (361)
Q Consensus       231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~  301 (361)
                      |++.-                       ...+|+..+.-|..+|+++.|+| +...|++++.|..|.+||+.
T Consensus       330 DLR~~-----------------------~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDls  378 (440)
T KOG0302|consen  330 DLRQF-----------------------KSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLS  378 (440)
T ss_pred             Ehhhc-----------------------cCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEee
Confidence            99843                       44479999999999999999999 45678888999999999985

>KOG0289|consensus

Probab=99.83  E-value=9.1e-19  Score=149.52  Aligned_cols=170  Identities=21%  Similarity=0.187  Sum_probs=135.6

Q ss_pred             eEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeC--CCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430         154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG--HSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       154 ~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~--h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd  231 (361)
                      ......|.++|+.+..+|.|.||++++.|++..+.|+++|..+.....  ..-.+++.+|+|||.+|.+|..||.++|||
T Consensus       296 ~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwd  375 (506)
T KOG0289|consen  296 PTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWD  375 (506)
T ss_pred             ccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEE
Confidence            344557999999999999999999999999999999999988776653  234589999999999999999999999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG  311 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~  311 (361)
                      +.++.                          .+..+.+|.++|.+++|+.+|-||++++.|+.|++||+|..+..+++.-
T Consensus       376 lks~~--------------------------~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l  429 (506)
T KOG0289|consen  376 LKSQT--------------------------NVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQL  429 (506)
T ss_pred             cCCcc--------------------------ccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeec
Confidence            97652                          5677889999999999999999999999999999999999888888875


Q ss_pred             CCC-CCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccc
Q psy8430         312 HDE-EPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQ  358 (361)
Q Consensus       312 h~~-~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~  358 (361)
                      ... .+..        +++.++     .|=.|+++  +-.+  +.=.++..+..|+
T Consensus       430 ~~~~~v~s~~fD~SGt~L~~~g-----~~l~Vy~~--~k~~--k~W~~~~~~~~~s  476 (506)
T KOG0289|consen  430 DEKKEVNSLSFDQSGTYLGIAG-----SDLQVYIC--KKKT--KSWTEIKELADHS  476 (506)
T ss_pred             cccccceeEEEcCCCCeEEeec-----ceeEEEEE--eccc--ccceeeehhhhcc
Confidence            443 3444        333444     56666666  4311  1124555666555

>KOG4283|consensus

Probab=99.83  E-value=2.5e-19  Score=146.00  Aligned_cols=163  Identities=17%  Similarity=0.239  Sum_probs=132.7

Q ss_pred             ccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCe------------EEEE---EeCCCCCeEEEEEec-CCCEEEEE
Q psy8430         159 GHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGK------------CVLQ---YSGHSGSVNSVRFLP-NKDLVLSA  221 (361)
Q Consensus       159 ~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~------------~~~~---~~~h~~~v~~v~~~~-~~~~l~s~  221 (361)
                      -|.+.|+++.+.+ .|+++++|+.||.|.+||++...            ++.-   -.+|.-.|.++.|-| |..+|.++
T Consensus        41 ~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtss  120 (397)
T KOG4283|consen   41 PHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSS  120 (397)
T ss_pred             cCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecc
Confidence            6889999999999 78899999999999999997432            1100   125778999999999 66689999


Q ss_pred             ECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC---CCEEEEEeCCCcEEEe
Q psy8430         222 SGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD---GEQVITASWDRVANLF  298 (361)
Q Consensus       222 ~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~d~~v~iw  298 (361)
                      +.|.++++||.++.+                           ........+.|++-+|+|-   .-++++|..|-.|++.
T Consensus       121 SFDhtlKVWDtnTlQ---------------------------~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLC  173 (397)
T KOG4283|consen  121 SFDHTLKVWDTNTLQ---------------------------EAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLC  173 (397)
T ss_pred             cccceEEEeecccce---------------------------eeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEE
Confidence            999999999998762                           2223345677888888883   3467788888899999


Q ss_pred             eCCCCeEEEEeecCCCCCeE---------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccc
Q psy8430         299 DVETGTILQSLTGHDEEPHI---------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQ  358 (361)
Q Consensus       299 d~~~~~~~~~~~~h~~~v~~---------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~  358 (361)
                      |+.+|.+-+++.+|.+.|.+         +++||+     .||.||+|  |+   |.-..|+.++--|.
T Consensus       174 Di~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgs-----aDg~irlW--Di---Rrasgcf~~lD~hn  232 (397)
T KOG4283|consen  174 DIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGS-----ADGAIRLW--DI---RRASGCFRVLDQHN  232 (397)
T ss_pred             eccCCcceeeeccccCceEEEEeccCceeEEEecC-----CCceEEEE--Ee---ecccceeEEeeccc
Confidence            99999999999999999988         677777     99999999  99   77557777777665

>KOG0646|consensus

Probab=99.82  E-value=1.9e-19  Score=154.99  Aligned_cols=174  Identities=16%  Similarity=0.147  Sum_probs=140.7

Q ss_pred             eecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC---------CCeEEEEEeCCCCCeEEEEEecC
Q psy8430         144 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ---------TGKCVLQYSGHSGSVNSVRFLPN  214 (361)
Q Consensus       144 ~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~---------~~~~~~~~~~h~~~v~~v~~~~~  214 (361)
                      +-|...++.++..+.+|-..|+|+.|+.||.+|+|||.||.|.+|.+-         +-+++..|..|.-+|+++...+.
T Consensus       106 YlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~G  185 (476)
T KOG0646|consen  106 YLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSG  185 (476)
T ss_pred             EEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCC
Confidence            344456667777788999999999999999999999999999999863         34678899999999999998875


Q ss_pred             --CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy8430         215 --KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD  292 (361)
Q Consensus       215 --~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d  292 (361)
                        ..+++|+|.|.++++||+..+..                          +..+ .....+.+++.+|.+..+++|+.+
T Consensus       186 g~~~rl~TaS~D~t~k~wdlS~g~L--------------------------Llti-~fp~si~av~lDpae~~~yiGt~~  238 (476)
T KOG0646|consen  186 GTNARLYTASEDRTIKLWDLSLGVL--------------------------LLTI-TFPSSIKAVALDPAERVVYIGTEE  238 (476)
T ss_pred             CccceEEEecCCceEEEEEecccee--------------------------eEEE-ecCCcceeEEEcccccEEEecCCc
Confidence              35799999999999999977632                          2222 345688999999999999999999


Q ss_pred             CcEEEeeCCC----------------CeEEEEeecCCC--CCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCC
Q psy8430         293 RVANLFDVET----------------GTILQSLTGHDE--EPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSEN  346 (361)
Q Consensus       293 ~~v~iwd~~~----------------~~~~~~~~~h~~--~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~  346 (361)
                      |.|.+.++..                +..+..+.+|.+  .|+|        +++||+     .||.|+||  |+   ..
T Consensus       239 G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd-----~dg~VcvW--di---~S  308 (476)
T KOG0646|consen  239 GKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGD-----EDGKVCVW--DI---YS  308 (476)
T ss_pred             ceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeC-----CCCCEEEE--ec---ch
Confidence            9999888653                234677889988  8888        677777     99999999  88   32


Q ss_pred             cceeeeeec
Q psy8430         347 PIHSVCVFQ  355 (361)
Q Consensus       347 ~~~~v~~~~  355 (361)
                       .+|+.++.
T Consensus       309 -~Q~iRtl~  316 (476)
T KOG0646|consen  309 -KQCIRTLQ  316 (476)
T ss_pred             -HHHHHHHh
Confidence             45555544

>KOG0301|consensus

Probab=99.82  E-value=1.1e-19  Score=163.32  Aligned_cols=164  Identities=28%  Similarity=0.418  Sum_probs=139.9

Q ss_pred             eccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC
Q psy8430         135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN  214 (361)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~  214 (361)
                      +..+..+..|.  .....++.+|+||++.|.|+....++. ++|||-|.++++|-.  +++...+.+|..+|+++++-|.
T Consensus        77 g~~D~~i~v~~--~~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv~~l~e  151 (745)
T KOG0301|consen   77 GGMDTTIIVFK--LSQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRI--GELVYSLQGHTASVWAVASLPE  151 (745)
T ss_pred             ecccceEEEEe--cCCCCchhhhhccccceeeeecCCcCc-eEecccccceEEecc--hhhhcccCCcchheeeeeecCC
Confidence            33344444333  355678899999999999999888886 999999999999985  5666779999999999999998


Q ss_pred             CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc
Q psy8430         215 KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRV  294 (361)
Q Consensus       215 ~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~  294 (361)
                      + .++|||.|++|++|.-.                            +.++.+.+|...|.++++-+++ .+++++.||.
T Consensus       152 ~-~~vTgsaDKtIklWk~~----------------------------~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~  201 (745)
T KOG0301|consen  152 N-TYVTGSADKTIKLWKGG----------------------------TLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGS  201 (745)
T ss_pred             C-cEEeccCcceeeeccCC----------------------------chhhhhccchhheeeeEEecCC-CeEeecCCce
Confidence            7 89999999999999642                            3688899999999999998764 5789999999


Q ss_pred             EEEeeCCCCeEEEEeecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         295 ANLFDVETGTILQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       295 v~iwd~~~~~~~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      |++|++ +|+++..+.+|+..+++        +++|++     .|++++||  +.
T Consensus       202 Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~g-----EDrtlriW--~~  248 (745)
T KOG0301|consen  202 IRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTG-----EDRTLRIW--KK  248 (745)
T ss_pred             EEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEec-----CCceEEEe--ec
Confidence            999999 79999999999999988        567777     99999999  65

>KOG0270|consensus

Probab=99.82  E-value=2.7e-19  Score=153.15  Aligned_cols=154  Identities=27%  Similarity=0.369  Sum_probs=128.9

Q ss_pred             eeccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec-CCCEEEEEECCCcEEEEeccc
Q psy8430         157 FSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVI  234 (361)
Q Consensus       157 l~~h~~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~lwd~~~  234 (361)
                      -.+|+.+|..++|+.. .+.|||||.|.+|++||+.+|++..++..|.+.|.++.|+| .+..|++|+.|+++.+.|.+.
T Consensus       239 ~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~  318 (463)
T KOG0270|consen  239 ASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRD  318 (463)
T ss_pred             cccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccC
Confidence            3479999999999984 55999999999999999999999999999999999999999 466799999999999999874


Q ss_pred             cccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEeeCCC-CeEEEEeecC
Q psy8430         235 NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG-EQVITASWDRVANLFDVET-GTILQSLTGH  312 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~-~~~~~~~~~h  312 (361)
                      ...                         ....+ .-.+.|-.++|+|.. ..+++++.||+|+-+|+|. ++++.++++|
T Consensus       319 ~~~-------------------------s~~~w-k~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AH  372 (463)
T KOG0270|consen  319 PSN-------------------------SGKEW-KFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAH  372 (463)
T ss_pred             ccc-------------------------cCceE-EeccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEec
Confidence            211                         11122 134678889999854 4677888999999999996 4999999999


Q ss_pred             CCCCeE---------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         313 DEEPHI---------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       313 ~~~v~~---------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      .++|.+         +++|++     .|+.|++|+++.
T Consensus       373 d~~ISgl~~n~~~p~~l~t~s-----~d~~Vklw~~~~  405 (463)
T KOG0270|consen  373 DDEISGLSVNIQTPGLLSTAS-----TDKVVKLWKFDV  405 (463)
T ss_pred             cCCcceEEecCCCCcceeecc-----ccceEEEEeecC
Confidence            999998         455555     999999997776

>KOG0288|consensus

Probab=99.82  E-value=4.6e-19  Score=150.38  Aligned_cols=216  Identities=19%  Similarity=0.198  Sum_probs=160.1

Q ss_pred             eccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC
Q psy8430         135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN  214 (361)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~  214 (361)
                      +..+++|..|.....++..+.+|.|-.++|+.++|.+++..+++++.|+.+++|++...+...++.||.+.|+++.|...
T Consensus       193 gg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~  272 (459)
T KOG0288|consen  193 GGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLS  272 (459)
T ss_pred             cchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhcc
Confidence            34455666777777788899999999999999999999999999999999999999999999999999999999999877


Q ss_pred             CCEEEEEECCCcEEEEeccccccccCCCCCCCCCC---------CCCCCCC--ceecc--cccEEEeCCCCcEEEEEEcC
Q psy8430         215 KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDE---------SKEPDES--SITLR--TPVKELLGHSNVVIAADWLS  281 (361)
Q Consensus       215 ~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~---------~~~~~~~--~~~~~--~~~~~~~~~~~~v~~~~~~~  281 (361)
                      ...+++|+.|.+|++||+....+.......+.-..         ..+++..  .+..+  .+......+ +.|+++..++
T Consensus       273 ~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~g-g~vtSl~ls~  351 (459)
T KOG0288|consen  273 HSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCSISDVISGHFDKKVRFWDIRSADKTRSVPLG-GRVTSLDLSM  351 (459)
T ss_pred             ccceeeccccchhhhhhhhhhheeccccccccccceEecceeeeecccccceEEEeccCCceeeEeecC-cceeeEeecc
Confidence            66699999999999999998766544332211111         1111111  12211  233344444 4899999999


Q ss_pred             CCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCC----CeEEEEEcCCCcc---cCCCeEEEEcCCCCCCCCcceeeeee
Q psy8430         282 DGEQVITASWDRVANLFDVETGTILQSLTGHDEE----PHILCVSSYYSKV---SCDLFQRIQHLDCGTSENPIHSVCVF  354 (361)
Q Consensus       282 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~----v~~~~~s~s~~~v---~~dg~i~iW~~d~~~~~~~~~~v~~~  354 (361)
                      +|..+.+++.|.++.+.|+++.+..+++.+....    .+..++|++..||   +.||.|+||  ++.+    ..+...+
T Consensus       352 ~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW--~v~t----gKlE~~l  425 (459)
T KOG0288|consen  352 DGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIW--SVFT----GKLEKVL  425 (459)
T ss_pred             CCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEE--EccC----ceEEEEe
Confidence            9999999999999999999999998888653322    3334444443322   499999999  6622    4455555


Q ss_pred             ccc
Q psy8430         355 QDI  357 (361)
Q Consensus       355 ~~h  357 (361)
                      ...
T Consensus       426 ~~s  428 (459)
T KOG0288|consen  426 SLS  428 (459)
T ss_pred             ccC
Confidence            443

>KOG0303|consensus

Probab=99.82  E-value=2.1e-19  Score=151.71  Aligned_cols=163  Identities=23%  Similarity=0.346  Sum_probs=132.0

Q ss_pred             EeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCC-------eEEEEEeCCCCCeEEEEEecC-CCEEEEEECCCc
Q psy8430         156 SFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTG-------KCVLQYSGHSGSVNSVRFLPN-KDLVLSASGDKS  226 (361)
Q Consensus       156 ~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~-------~~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~  226 (361)
                      .+.||+++|..++|+| +...|||||.|.+|.||.+..+       +++..+.+|...|--|+|+|. .+.|++++.|.+
T Consensus        76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~  155 (472)
T KOG0303|consen   76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT  155 (472)
T ss_pred             CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence            4569999999999999 6679999999999999998654       567888999999999999995 457899999999


Q ss_pred             EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEE
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  306 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~  306 (361)
                      |.+||+.++.                          .+..+. |...|++++|+.+|.++++++.|..|+|||.++++.+
T Consensus       156 v~iWnv~tge--------------------------ali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v  208 (472)
T KOG0303|consen  156 VSIWNVGTGE--------------------------ALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVV  208 (472)
T ss_pred             EEEEeccCCc--------------------------eeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEe
Confidence            9999998873                          233343 9999999999999999999999999999999999999


Q ss_pred             EEeecCCCCCeE-EEEEcC-CC-----cccCCCeEEEEcCCCCCCCCc
Q psy8430         307 QSLTGHDEEPHI-LCVSSY-YS-----KVSCDLFQRIQHLDCGTSENP  347 (361)
Q Consensus       307 ~~~~~h~~~v~~-~~~s~s-~~-----~v~~dg~i~iW~~d~~~~~~~  347 (361)
                      ..-.+|.+.-.. .++-++ .+     +=-.+..+-+|  |..+-..|
T Consensus       209 ~e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLw--dp~nl~eP  254 (472)
T KOG0303|consen  209 SEGVAHEGAKPARAIFLASGKIFTTGFSRMSERQIALW--DPNNLEEP  254 (472)
T ss_pred             eecccccCCCcceeEEeccCceeeeccccccccceecc--CcccccCc
Confidence            988888765443 222222 11     11257888999  77444444

>KOG1407|consensus

Probab=99.82  E-value=1.8e-19  Score=144.44  Aligned_cols=193  Identities=20%  Similarity=0.279  Sum_probs=134.0

Q ss_pred             EEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE--EEeCCCCCeEEEEEec-CCCEEEEEECCCcEEEEe
Q psy8430         155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL--QYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~--~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~lwd  231 (361)
                      +.+++|.+.|.+++|+.+|..|++|+.|+++.+|++...+...  ...+|.+.|-.++|+| ....|++++.|++|++||
T Consensus        14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd   93 (313)
T KOG1407|consen   14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWD   93 (313)
T ss_pred             HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEE
Confidence            5677999999999999999999999999999999998774433  3568999999999998 677899999999999999


Q ss_pred             ccccccccCCCCCCCCCCC-CCCCCCceeccc-----------ccEEE--eCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy8430         232 AVINWECLNNDNDSDLDES-KEPDESSITLRT-----------PVKEL--LGHSNVVIAADWLSDGEQVITASWDRVANL  297 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~d~~v~i  297 (361)
                      ++.++++.......+.... ..++........           ..+..  ....-.+.-++|+-++.+++....-|.|.|
T Consensus        94 ~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~I  173 (313)
T KOG1407|consen   94 IRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEI  173 (313)
T ss_pred             eccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceEEE
Confidence            9988765543333332221 111111111100           00000  011224555666666666666655666666


Q ss_pred             eeCCCCeEEEEeecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccc
Q psy8430         298 FDVETGTILQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQ  358 (361)
Q Consensus       298 wd~~~~~~~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~  358 (361)
                      ......+++.++++|.....|        ++++|+     .|-.+.+|  |+   .. +-|+.+|..|.
T Consensus       174 LsypsLkpv~si~AH~snCicI~f~p~GryfA~Gs-----ADAlvSLW--D~---~E-LiC~R~isRld  231 (313)
T KOG1407|consen  174 LSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGS-----ADALVSLW--DV---DE-LICERCISRLD  231 (313)
T ss_pred             EeccccccccccccCCcceEEEEECCCCceEeecc-----ccceeecc--Ch---hH-hhhheeecccc
Confidence            666666778888888766555        667777     99999999  87   44 67777776654

>KOG0973|consensus

Probab=99.82  E-value=5.9e-19  Score=166.15  Aligned_cols=165  Identities=23%  Similarity=0.365  Sum_probs=135.9

Q ss_pred             cCCCeEEEEEcCCCCEEEEEe--CCCcEEEEeCCC------------CeEEEEEeCCCCCeEEEEEecCCCEEEEEECCC
Q psy8430         160 HRDGVWDVAVRPGQPVLGSAS--ADRTVRLWSTQT------------GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK  225 (361)
Q Consensus       160 h~~~V~~l~~~~~~~~l~s~s--~d~~i~~wd~~~------------~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~  225 (361)
                      +...|.+++.+|+|..+++||  .|+.+++|+.+.            .+.+.+...|.+.|.|+.|+|+|.+||+|+.|+
T Consensus        12 ~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~   91 (942)
T KOG0973|consen   12 NEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDR   91 (942)
T ss_pred             CCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcc
Confidence            446699999999999999999  999999998752            234556678999999999999999999999999


Q ss_pred             cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE
Q psy8430         226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI  305 (361)
Q Consensus       226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~  305 (361)
                      .|.||+.... .       .....+..........++....+.+|.+.|..++|+|++.++++++.|++|.||+..+.++
T Consensus        92 ~v~iW~~~~~-~-------~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~  163 (942)
T KOG0973|consen   92 LVMIWERAEI-G-------SGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFEL  163 (942)
T ss_pred             eEEEeeeccc-C-------CcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEcccccee
Confidence            9999987531 0       0000011111223445568889999999999999999999999999999999999999999


Q ss_pred             EEEeecCCCCCeE--------EEEEcCCCcccCCCeEEEE
Q psy8430         306 LQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQ  337 (361)
Q Consensus       306 ~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW  337 (361)
                      +.++.+|.+.|..        +++|-+     .|++|+||
T Consensus       164 ~~vl~~H~s~VKGvs~DP~Gky~ASqs-----dDrtikvw  198 (942)
T KOG0973|consen  164 LKVLRGHQSLVKGVSWDPIGKYFASQS-----DDRTLKVW  198 (942)
T ss_pred             eeeeecccccccceEECCccCeeeeec-----CCceEEEE
Confidence            9999999998877        666666     99999999

>KOG0973|consensus

Probab=99.82  E-value=4.5e-19  Score=166.95  Aligned_cols=126  Identities=29%  Similarity=0.408  Sum_probs=114.3

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC------------------CeEEEEEeCCCCCeEEEEEe
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT------------------GKCVLQYSGHSGSVNSVRFL  212 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~------------------~~~~~~~~~h~~~v~~v~~~  212 (361)
                      .+.+.+...|.+.|+|+.|+|||.+||+||.|+.|.+|....                  .+++..+.+|.+.|..++|+
T Consensus        59 ~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Ws  138 (942)
T KOG0973|consen   59 PKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWS  138 (942)
T ss_pred             chhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccC
Confidence            456777889999999999999999999999999999998762                  13677888999999999999


Q ss_pred             cCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy8430         213 PNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD  292 (361)
Q Consensus       213 ~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d  292 (361)
                      |++.+|++++.|++|.|||.++.                          ..+..+.+|.+.|-.+.|+|-|+||++-+.|
T Consensus       139 p~~~~lvS~s~DnsViiwn~~tF--------------------------~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdD  192 (942)
T KOG0973|consen  139 PDDSLLVSVSLDNSVIIWNAKTF--------------------------ELLKVLRGHQSLVKGVSWDPIGKYFASQSDD  192 (942)
T ss_pred             CCccEEEEecccceEEEEccccc--------------------------eeeeeeecccccccceEECCccCeeeeecCC
Confidence            99999999999999999998754                          3788999999999999999999999999999


Q ss_pred             CcEEEeeCCC
Q psy8430         293 RVANLFDVET  302 (361)
Q Consensus       293 ~~v~iwd~~~  302 (361)
                      ++|+||++.+
T Consensus       193 rtikvwrt~d  202 (942)
T KOG0973|consen  193 RTLKVWRTSD  202 (942)
T ss_pred             ceEEEEEccc
Confidence            9999999654

>KOG0306|consensus

Probab=99.81  E-value=4.5e-19  Score=160.72  Aligned_cols=151  Identities=30%  Similarity=0.366  Sum_probs=138.4

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccC
Q psy8430         161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLN  240 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~  240 (361)
                      ...|.|+.+||||.+|+.+=-|++|++|-+++-+.-..+.||.-+|.|+..+|++++++|||.|+.|++|-+.-|     
T Consensus       508 ~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFG-----  582 (888)
T KOG0306|consen  508 EDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFG-----  582 (888)
T ss_pred             cccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccc-----
Confidence            477999999999999999999999999999999998999999999999999999999999999999999977655     


Q ss_pred             CCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEE
Q psy8430         241 NDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILC  320 (361)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~  320 (361)
                                           .|-+.+.+|...|.++.|-|....+.+++.|+.|+-||-...++++.+.+|...|.++.
T Consensus       583 ---------------------DCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLa  641 (888)
T KOG0306|consen  583 ---------------------DCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLA  641 (888)
T ss_pred             ---------------------hhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhhhhhheeeccchheeeeeE
Confidence                                 47788899999999999999999999999999999999999999999999999999955


Q ss_pred             EEcCCCcc---cCCCeEEEE
Q psy8430         321 VSSYYSKV---SCDLFQRIQ  337 (361)
Q Consensus       321 ~s~s~~~v---~~dg~i~iW  337 (361)
                      +++++.+|   ++|.+||+|
T Consensus       642 v~~~G~~vvs~shD~sIRlw  661 (888)
T KOG0306|consen  642 VSPNGSFVVSSSHDKSIRLW  661 (888)
T ss_pred             EcCCCCeEEeccCCceeEee
Confidence            55543332   499999999

>KOG1332|consensus

Probab=99.81  E-value=1.7e-19  Score=143.19  Aligned_cols=171  Identities=22%  Similarity=0.272  Sum_probs=135.0

Q ss_pred             eccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC---eEEEEEeCCCCCeEEEEEec--CCCEEEEEECCCcEEEEec
Q psy8430         158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG---KCVLQYSGHSGSVNSVRFLP--NKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       158 ~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~---~~~~~~~~h~~~v~~v~~~~--~~~~l~s~~~d~~i~lwd~  232 (361)
                      .+|...|.++..+=-|..|++++.|++|+||.++..   +.+.++.||.++|..++|..  .|.+|++++.||.|.||.-
T Consensus         8 t~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke   87 (299)
T KOG1332|consen    8 TQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKE   87 (299)
T ss_pred             hhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEec
Confidence            479999999888888999999999999999999764   57889999999999999976  7999999999999999986


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCcEEEeeCCCC-e-E-EE
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVETG-T-I-LQ  307 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~-~-~-~~  307 (361)
                      .++                        ..+.......|...|++++|-|.  |-.|++++.||.|.|.+.++. . . -.
T Consensus        88 ~~g------------------------~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~k  143 (299)
T KOG1332|consen   88 ENG------------------------RWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSK  143 (299)
T ss_pred             CCC------------------------chhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchh
Confidence            543                        23456677789999999999884  668999999999999988753 1 1 22


Q ss_pred             EeecCCCCCeEE----------------------EEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         308 SLTGHDEEPHIL----------------------CVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       308 ~~~~h~~~v~~~----------------------~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      ...+|.-.|.++                      ++||+     .|..|+||.+|-  ++  -..-+.|.+|++-|
T Consensus       144 i~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgG-----cDn~VkiW~~~~--~~--w~~e~~l~~H~dwV  210 (299)
T KOG1332|consen  144 IVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGG-----CDNLVKIWKFDS--DS--WKLERTLEGHKDWV  210 (299)
T ss_pred             hhhccccccceeeecCcCCCccccccCcccccceeeccC-----CccceeeeecCC--cc--hhhhhhhhhcchhh
Confidence            335677666663                      55555     999999994443  22  23345589998743

>KOG0647|consensus

Probab=99.81  E-value=7e-19  Score=143.75  Aligned_cols=147  Identities=24%  Similarity=0.428  Sum_probs=122.7

Q ss_pred             cCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCC-CeEE-EEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccc
Q psy8430         160 HRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQT-GKCV-LQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW  236 (361)
Q Consensus       160 h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~-~~~~-~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~  236 (361)
                      -...|.+|+|+| ...++++||-|++||+|+++. |..+ .....|.++|.+++|+.+|..+++|+.|+.+++||+.++ 
T Consensus        26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~-  104 (347)
T KOG0647|consen   26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG-  104 (347)
T ss_pred             cccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC-
Confidence            357799999999 556777999999999999976 3322 223459999999999999999999999999999999877 


Q ss_pred             cccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCC--EEEEEeCCCcEEEeeCCCCeEEEEeecCCC
Q psy8430         237 ECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE--QVITASWDRVANLFDVETGTILQSLTGHDE  314 (361)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~  314 (361)
                                                ....+..|.++|..+.|-+...  .|+||+.|.+|+.||.+...++.++.- .+
T Consensus       105 --------------------------Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~L-Pe  157 (347)
T KOG0647|consen  105 --------------------------QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQL-PE  157 (347)
T ss_pred             --------------------------CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeec-cc
Confidence                                      5677788999999999987655  789999999999999999999888864 33


Q ss_pred             CCeE------EEEEcCCCcccCCCeEEEEcC
Q psy8430         315 EPHI------LCVSSYYSKVSCDLFQRIQHL  339 (361)
Q Consensus       315 ~v~~------~~~s~s~~~v~~dg~i~iW~~  339 (361)
                      .+++      +++.+.     .+..|.+|+|
T Consensus       158 RvYa~Dv~~pm~vVat-----a~r~i~vynL  183 (347)
T KOG0647|consen  158 RVYAADVLYPMAVVAT-----AERHIAVYNL  183 (347)
T ss_pred             eeeehhccCceeEEEe-----cCCcEEEEEc
Confidence            4444      677777     8899999944

>KOG0301|consensus

Probab=99.81  E-value=2.9e-19  Score=160.64  Aligned_cols=191  Identities=19%  Similarity=0.239  Sum_probs=159.8

Q ss_pred             eeeeeccceeEEeeecCccceeeeEEeeccCCCeEE-EEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEE
Q psy8430         131 NKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWD-VAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNS  208 (361)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~-l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~  208 (361)
                      ..+.+..++.++.|..........+.+.+|.+.|.+ +++.+ ++..|++|+.|.+|.+|......++.++.+|.+.|+|
T Consensus        27 ~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~  106 (745)
T KOG0301|consen   27 CIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCS  106 (745)
T ss_pred             EEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEEecCCCCchhhhhccccceee
Confidence            345556666677787777777777889999999988 88876 5557999999999999999999999999999999999


Q ss_pred             EEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEE
Q psy8430         209 VRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT  288 (361)
Q Consensus       209 v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s  288 (361)
                      +....++. ++|||.|.++++|.+.                            .+...+.+|...|++++.-|.+ .++|
T Consensus       107 ls~~~~~~-~iSgSWD~TakvW~~~----------------------------~l~~~l~gH~asVWAv~~l~e~-~~vT  156 (745)
T KOG0301|consen  107 LSIGEDGT-LISGSWDSTAKVWRIG----------------------------ELVYSLQGHTASVWAVASLPEN-TYVT  156 (745)
T ss_pred             eecCCcCc-eEecccccceEEecch----------------------------hhhcccCCcchheeeeeecCCC-cEEe
Confidence            99877776 9999999999999764                            2556689999999999999988 8899


Q ss_pred             EeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcC--CCcccCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430         289 ASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSY--YSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST  360 (361)
Q Consensus       289 ~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s--~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~  360 (361)
                      ||.|.+|++|.-  +++++++.+|+..|..+++-.+  |++.+.||.|++|  ++    . +.++....||++.
T Consensus       157 gsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w--~~----~-ge~l~~~~ghtn~  221 (745)
T KOG0301|consen  157 GSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLW--DL----D-GEVLLEMHGHTNF  221 (745)
T ss_pred             ccCcceeeeccC--CchhhhhccchhheeeeEEecCCCeEeecCCceEEEE--ec----c-CceeeeeeccceE
Confidence            999999999975  7889999999999999554333  4455699999999  54    1 3567888888864

>KOG2096|consensus

Probab=99.81  E-value=1.2e-18  Score=143.48  Aligned_cols=162  Identities=22%  Similarity=0.304  Sum_probs=118.9

Q ss_pred             eEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-----e-------------------------------EEE
Q psy8430         154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-----K-------------------------------CVL  197 (361)
Q Consensus       154 ~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~-----~-------------------------------~~~  197 (361)
                      +..|+||.+.|++++|+.||.+|++++.|++|++|+++.-     +                               .+.
T Consensus        79 ~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~  158 (420)
T KOG2096|consen   79 VSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLC  158 (420)
T ss_pred             hhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEE
Confidence            4568899999999999999999999999999999998621     1                               111


Q ss_pred             EEe-----------------------CCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCC
Q psy8430         198 QYS-----------------------GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPD  254 (361)
Q Consensus       198 ~~~-----------------------~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~  254 (361)
                      .+.                       .|.-.|.++-....+.++++++.|..|.+|+++ +                   
T Consensus       159 vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-G-------------------  218 (420)
T KOG2096|consen  159 VYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-G-------------------  218 (420)
T ss_pred             EEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-C-------------------
Confidence            110                       122233333333455677788888888888776 2                   


Q ss_pred             CCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCC---CC-----eEEEEeecCCCCCeEEEEEcC--
Q psy8430         255 ESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE---TG-----TILQSLTGHDEEPHILCVSSY--  324 (361)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~---~~-----~~~~~~~~h~~~v~~~~~s~s--  324 (361)
                             +.+..+......-+..+.+|+|+++++++-.--|++|.+-   .|     ..+..+++|...|..++++.+  
T Consensus       219 -------q~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~  291 (420)
T KOG2096|consen  219 -------QLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSST  291 (420)
T ss_pred             -------ceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcc
Confidence                   1344444445556678899999999999999999999864   22     235678999999999888877  


Q ss_pred             -CCcccCCCeEEEEcCCCC
Q psy8430         325 -YSKVSCDLFQRIQHLDCG  342 (361)
Q Consensus       325 -~~~v~~dg~i~iW~~d~~  342 (361)
                       .+.|+.||++||||.|++
T Consensus       292 r~vtvSkDG~wriwdtdVr  310 (420)
T KOG2096|consen  292 RAVTVSKDGKWRIWDTDVR  310 (420)
T ss_pred             eeEEEecCCcEEEeeccce
Confidence             335789999999987773

>KOG0278|consensus

Probab=99.80  E-value=2.2e-18  Score=137.35  Aligned_cols=156  Identities=25%  Similarity=0.271  Sum_probs=130.2

Q ss_pred             EEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccc
Q psy8430         155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI  234 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~  234 (361)
                      ..+.+|.+.|..+.|....+.|++++.|++||+||.+++..++.+. ...+|+++..+++|+++.+ +..+.|.+||..+
T Consensus       137 ~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~-~~s~VtSlEvs~dG~ilTi-a~gssV~Fwdaks  214 (334)
T KOG0278|consen  137 KEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLE-FNSPVTSLEVSQDGRILTI-AYGSSVKFWDAKS  214 (334)
T ss_pred             hhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEe-cCCCCcceeeccCCCEEEE-ecCceeEEecccc
Confidence            4567999999999999988899999999999999999999999988 6789999999999987755 4567899999864


Q ss_pred             cccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEe-ecCC
Q psy8430         235 NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL-TGHD  313 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~-~~h~  313 (361)
                      -.                          .++... -...|.+.+.+|+...+++|+.|..++.||..||+-+..+ ++|-
T Consensus       215 f~--------------------------~lKs~k-~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~  267 (334)
T KOG0278|consen  215 FG--------------------------LLKSYK-MPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHF  267 (334)
T ss_pred             cc--------------------------ceeecc-CccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCC
Confidence            42                          222222 2346888999999999999999999999999999999987 8999


Q ss_pred             CCCeEEEEEcC---CCcccCCCeEEEEcCCC
Q psy8430         314 EEPHILCVSSY---YSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       314 ~~v~~~~~s~s---~~~v~~dg~i~iW~~d~  341 (361)
                      ++|.|+-++++   |.+.+.||+||||  -+
T Consensus       268 gpVhcVrFSPdGE~yAsGSEDGTirlW--Qt  296 (334)
T KOG0278|consen  268 GPVHCVRFSPDGELYASGSEDGTIRLW--QT  296 (334)
T ss_pred             CceEEEEECCCCceeeccCCCceEEEE--Ee
Confidence            99999655555   3334599999999  55

>KOG0305|consensus

Probab=99.80  E-value=1.7e-18  Score=154.96  Aligned_cols=159  Identities=16%  Similarity=0.316  Sum_probs=133.1

Q ss_pred             EeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec-CCCEEEEEE--CCCcEEEEec
Q psy8430         156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP-NKDLVLSAS--GDKSVHIWQA  232 (361)
Q Consensus       156 ~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~--~d~~i~lwd~  232 (361)
                      ++.+|...|..++|++|+.+||+|+.|+.+.|||.....+...+..|...|..++|+| ...+||+|+  .|+.|++||+
T Consensus       296 ~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~  375 (484)
T KOG0305|consen  296 TLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNT  375 (484)
T ss_pred             hhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEc
Confidence            4789999999999999999999999999999999988888889999999999999999 566788865  6999999999


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe--CCCcEEEeeCCCCeEEEEee
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS--WDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~d~~v~iwd~~~~~~~~~~~  310 (361)
                      .++.                          .+..+ .-.+.|.++.|++..+-|+++.  .++.|.||+..+.+.+..+.
T Consensus       376 ~~g~--------------------------~i~~v-dtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~  428 (484)
T KOG0305|consen  376 NTGA--------------------------RIDSV-DTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELL  428 (484)
T ss_pred             CCCc--------------------------Eeccc-ccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeec
Confidence            8763                          22222 3467899999999988787754  46789999999999999999


Q ss_pred             cCCCCCeEEEEEcCCCc---ccCCCeEEEEcCCCCC
Q psy8430         311 GHDEEPHILCVSSYYSK---VSCDLFQRIQHLDCGT  343 (361)
Q Consensus       311 ~h~~~v~~~~~s~s~~~---v~~dg~i~iW~~d~~~  343 (361)
                      +|...|..+..++++.+   .+.|.++++|  ++-+
T Consensus       429 gH~~RVl~la~SPdg~~i~t~a~DETlrfw--~~f~  462 (484)
T KOG0305|consen  429 GHTSRVLYLALSPDGETIVTGAADETLRFW--NLFD  462 (484)
T ss_pred             CCcceeEEEEECCCCCEEEEecccCcEEec--cccC
Confidence            99999988655555332   2499999999  5533

>KOG0299|consensus

Probab=99.79  E-value=2.4e-18  Score=147.92  Aligned_cols=174  Identities=21%  Similarity=0.250  Sum_probs=141.6

Q ss_pred             cCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCC
Q psy8430         146 TSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK  225 (361)
Q Consensus       146 ~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~  225 (361)
                      |+..+++.++.+++|.+.|.+++|--.-.-+++++.|++|++|+++.-..+.++.+|.+.|..|......+.+-.|+.|+
T Consensus       229 w~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrDr  308 (479)
T KOG0299|consen  229 WDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSRERCVTVGGRDR  308 (479)
T ss_pred             ecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcccceEEeccccc
Confidence            34466788889999999999999998888999999999999999998888888999999999998887777777777999


Q ss_pred             cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE
Q psy8430         226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI  305 (361)
Q Consensus       226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~  305 (361)
                      ++++|++...                           ....+.+|.+.+-+++|- +...+++|+.+|.|.+|++-+.++
T Consensus       309 T~rlwKi~ee---------------------------sqlifrg~~~sidcv~~I-n~~HfvsGSdnG~IaLWs~~KKkp  360 (479)
T KOG0299|consen  309 TVRLWKIPEE---------------------------SQLIFRGGEGSIDCVAFI-NDEHFVSGSDNGSIALWSLLKKKP  360 (479)
T ss_pred             eeEEEecccc---------------------------ceeeeeCCCCCeeeEEEe-cccceeeccCCceEEEeeecccCc
Confidence            9999998433                           345667888899999987 567899999999999999999998


Q ss_pred             EEEeec-CCC-----------CCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeee
Q psy8430         306 LQSLTG-HDE-----------EPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVF  354 (361)
Q Consensus       306 ~~~~~~-h~~-----------~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~  354 (361)
                      +.+... |.-           -|++        +++||+     ++|.||+|  -++++-.++.++..+
T Consensus       361 lf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS-----~~G~vrLW--~i~~g~r~i~~l~~l  422 (479)
T KOG0299|consen  361 LFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGS-----WSGCVRLW--KIEDGLRAINLLYSL  422 (479)
T ss_pred             eeEeeccccccCCccccccccceeeeEecccCceEEecC-----CCCceEEE--EecCCccccceeeec
Confidence            887652 321           1222        778888     99999999  776654445554443

>KOG0639|consensus

Probab=99.79  E-value=1.4e-18  Score=150.97  Aligned_cols=194  Identities=13%  Similarity=0.161  Sum_probs=156.2

Q ss_pred             eeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEE
Q psy8430         139 KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV  218 (361)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l  218 (361)
                      ..+++|+-...+......+..-.-..+.++.+||.+..+++..||.|.|||+++...++.|+||.+.+.||..+++|..|
T Consensus       487 stlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtkl  566 (705)
T KOG0639|consen  487 STLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKL  566 (705)
T ss_pred             ceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCcee
Confidence            34556666666666666666666778889999999999999999999999999999999999999999999999999999


Q ss_pred             EEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCcee--------------cccccEEEeCCCCcEEEEEEcCCCC
Q psy8430         219 LSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSIT--------------LRTPVKELLGHSNVVIAADWLSDGE  284 (361)
Q Consensus       219 ~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~v~~~~~~~~~~  284 (361)
                      .||+.|.+|+.||++++.++......+-+....+.....|.              .......+..|.+.|.++.|.+.|+
T Consensus       567 WTGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVLSlKFa~cGk  646 (705)
T KOG0639|consen  567 WTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLKFAYCGK  646 (705)
T ss_pred             ecCCCccceeehhhhhhhhhhhhhhhhhheecccCCCccceeeecccCcEEEEecCCccceeecccccEEEEEEecccCc
Confidence            99999999999999999887766554443332222211111              1122345566889999999999999


Q ss_pred             EEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE-------EEEEcCCCcccCCCeEEEE
Q psy8430         285 QVITASWDRVANLFDVETGTILQSLTGHDEEPHI-------LCVSSYYSKVSCDLFQRIQ  337 (361)
Q Consensus       285 ~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~-------~~~s~s~~~v~~dg~i~iW  337 (361)
                      ++++.+.|+.+..|....|..+...+..+....|       +++||+     .|....||
T Consensus       647 wfvStGkDnlLnawrtPyGasiFqskE~SsVlsCDIS~ddkyIVTGS-----GdkkATVY  701 (705)
T KOG0639|consen  647 WFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISFDDKYIVTGS-----GDKKATVY  701 (705)
T ss_pred             eeeecCchhhhhhccCccccceeeccccCcceeeeeccCceEEEecC-----CCcceEEE
Confidence            9999999999999999999888888765555444       899999     99988888

>KOG0772|consensus

Probab=99.78  E-value=2.3e-18  Score=150.07  Aligned_cols=162  Identities=19%  Similarity=0.203  Sum_probs=120.4

Q ss_pred             EEeeccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCe-EEEEEe-----CCCCCeEEEEEecCCCEEEEEECCCcE
Q psy8430         155 RSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGK-CVLQYS-----GHSGSVNSVRFLPNKDLVLSASGDKSV  227 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~~~-~~~~~~-----~h~~~v~~v~~~~~~~~l~s~~~d~~i  227 (361)
                      ..-+||...++|.+|+|. .+.|++++.||++++||+...+ .+.++.     +..-+++.++|+|+++++|+|+.||.|
T Consensus       262 ~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSI  341 (641)
T KOG0772|consen  262 YNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSI  341 (641)
T ss_pred             hccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCce
Confidence            344689999999999995 4589999999999999997653 333333     334578999999999999999999999


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCC--cEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC-e
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSN--VVIAADWLSDGEQVITASWDRVANLFDVETG-T  304 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~-~  304 (361)
                      .+|+....                       ........-..|..  .|++++||++|++|++-+.|+++++||++.. +
T Consensus       342 Q~W~~~~~-----------------------~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kk  398 (641)
T KOG0772|consen  342 QIWDKGSR-----------------------TVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKK  398 (641)
T ss_pred             eeeecCCc-----------------------ccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecccccc
Confidence            99997532                       22223445557776  8999999999999999999999999999964 5


Q ss_pred             EEEEeecCC------CCCeE----EEEEcCCC-cccCCCeEEEEcCCC
Q psy8430         305 ILQSLTGHD------EEPHI----LCVSSYYS-KVSCDLFQRIQHLDC  341 (361)
Q Consensus       305 ~~~~~~~h~------~~v~~----~~~s~s~~-~v~~dg~i~iW~~d~  341 (361)
                      ++..+.+-.      ..+.+    ++++|.-+ ....-|.+.++  |.
T Consensus       399 pL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~--d~  444 (641)
T KOG0772|consen  399 PLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFF--DR  444 (641)
T ss_pred             chhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEE--ec
Confidence            555554321      11111    66666511 22356778888  76

>KOG0288|consensus

Probab=99.77  E-value=1.7e-19  Score=152.94  Aligned_cols=169  Identities=21%  Similarity=0.306  Sum_probs=140.9

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe--EEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEE
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI  229 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~l  229 (361)
                      .....+..|.+.|..+.|-++...|++|+.|..|++|++..++  .+.++.|..++|+++.|.+++..+++++.|+.+++
T Consensus       166 ~~~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~  245 (459)
T KOG0288|consen  166 RALFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRL  245 (459)
T ss_pred             hhhhhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceee
Confidence            4455677899999999999998999999999999999997765  67788889999999999999999999999999999


Q ss_pred             EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEe
Q psy8430         230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL  309 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~  309 (361)
                      |++...                          +...++.||...|+++.|......+++|+.|.+|++||+..+.|..++
T Consensus       246 Wnvd~~--------------------------r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~  299 (459)
T KOG0288|consen  246 WNVDSL--------------------------RLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTV  299 (459)
T ss_pred             eeccch--------------------------hhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheeccc
Confidence            998755                          367788999999999999877767999999999999999999998877


Q ss_pred             ecCCC--CCeE---EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeeccc
Q psy8430         310 TGHDE--EPHI---LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDI  357 (361)
Q Consensus       310 ~~h~~--~v~~---~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h  357 (361)
                      ..-+.  .|.+   .++|+.     .|++||+|  |.   |. ..++.+..+|
T Consensus       300 l~~S~cnDI~~~~~~~~SgH-----~DkkvRfw--D~---Rs-~~~~~sv~~g  341 (459)
T KOG0288|consen  300 LPGSQCNDIVCSISDVISGH-----FDKKVRFW--DI---RS-ADKTRSVPLG  341 (459)
T ss_pred             cccccccceEecceeeeecc-----cccceEEE--ec---cC-CceeeEeecC
Confidence            53222  2222   567788     99999999  98   44 3344444444

>KOG0269|consensus

Probab=99.77  E-value=8.2e-19  Score=159.55  Aligned_cols=150  Identities=17%  Similarity=0.246  Sum_probs=126.8

Q ss_pred             eEEEEEcC-CCCEEEEEeCCCcEEEEeCCC---CeEEEEEeCCCCCeEEEEEec-CCCEEEEEECCCcEEEEeccccccc
Q psy8430         164 VWDVAVRP-GQPVLGSASADRTVRLWSTQT---GKCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVINWEC  238 (361)
Q Consensus       164 V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~---~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~lwd~~~~~~~  238 (361)
                      +..+.|.. +.++||+++..|.|.+||+..   .+.+..|..|...|+++.|++ ...+|++|+.||+|++||++...  
T Consensus        90 ~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~--  167 (839)
T KOG0269|consen   90 AADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKK--  167 (839)
T ss_pred             hhhcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccc--
Confidence            44566876 567999999999999999976   455667888999999999998 56789999999999999998663  


Q ss_pred             cCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEeeCCC-CeEEEEeecCCCCC
Q psy8430         239 LNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVET-GTILQSLTGHDEEP  316 (361)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~-~~~~~~~~~h~~~v  316 (361)
                                              ....+.+....|..++|+| .+.+++++...|.+.+||++. .++...+.+|.++|
T Consensus       168 ------------------------S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV  223 (839)
T KOG0269|consen  168 ------------------------SKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPV  223 (839)
T ss_pred             ------------------------ccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCce
Confidence                                    4455666788999999999 677889999999999999985 46778889999999


Q ss_pred             eE--------EEEEcCCCcccCCCeEEEEcCCCCCCCC
Q psy8430         317 HI--------LCVSSYYSKVSCDLFQRIQHLDCGTSEN  346 (361)
Q Consensus       317 ~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~  346 (361)
                      .+        ++|||+     .|+.|+||  |..+++.
T Consensus       224 ~c~nwhPnr~~lATGG-----RDK~vkiW--d~t~~~~  254 (839)
T KOG0269|consen  224 LCLNWHPNREWLATGG-----RDKMVKIW--DMTDSRA  254 (839)
T ss_pred             EEEeecCCCceeeecC-----CCccEEEE--eccCCCc
Confidence            98        899999     99999999  6654443

>KOG0647|consensus

Probab=99.77  E-value=2.4e-17  Score=134.91  Aligned_cols=181  Identities=15%  Similarity=0.178  Sum_probs=129.6

Q ss_pred             EEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC--EEEEEECCCcEEEEec
Q psy8430         155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD--LVLSASGDKSVHIWQA  232 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~--~l~s~~~d~~i~lwd~  232 (361)
                      +....|.++|.+++|+.+|..+++|+.|+.+++||+.+++ ..++..|.++|.++.|.+...  .|+|||-|++|+.||.
T Consensus        66 ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q-~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~  144 (347)
T KOG0647|consen   66 KAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQ-VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDT  144 (347)
T ss_pred             hhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCC-eeeeeecccceeEEEEecCCCcceeEecccccceeeccc
Confidence            3445799999999999999999999999999999999996 456677999999999998665  7999999999999999


Q ss_pred             cccccccCCCCCCCCCCCCCC-----------CCCceecccccEEEeCC----CCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy8430         233 VINWECLNNDNDSDLDESKEP-----------DESSITLRTPVKELLGH----SNVVIAADWLSDGEQVITASWDRVANL  297 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~s~~~d~~v~i  297 (361)
                      +...++...............           ....+....+...+..+    .-.+.+++..++..-.+.|+-.|.+.|
T Consensus       145 R~~~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~i  224 (347)
T KOG0647|consen  145 RSSNPVATLQLPERVYAADVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAI  224 (347)
T ss_pred             CCCCeeeeeeccceeeehhccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEE
Confidence            987665543332221111100           00011111112222222    235788998888888899999999999


Q ss_pred             eeCCCC--eEEEEeecCCC------CCeE-----------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         298 FDVETG--TILQSLTGHDE------EPHI-----------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       298 wd~~~~--~~~~~~~~h~~------~v~~-----------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      ..+..+  +.-.++++|..      .|++           .++|.+     .||++.+||-|.
T Consensus       225 q~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaG-----sDGtf~FWDkda  282 (347)
T KOG0647|consen  225 QYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAG-----SDGTFSFWDKDA  282 (347)
T ss_pred             EecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEec-----CCceEEEecchh
Confidence            988876  44456667753      1333           556666     999999995555

>KOG0268|consensus

Probab=99.76  E-value=2.9e-18  Score=143.37  Aligned_cols=196  Identities=19%  Similarity=0.221  Sum_probs=144.8

Q ss_pred             eeEEeeccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430         153 KIRSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       153 ~~~~l~~h~~~V~~l~~~~~~-~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd  231 (361)
                      .+..|.||...|.|++=+|.. ..+++|+.||.|++||+....++.++..|.+.|..|++..  ..+++++.|++|+.|-
T Consensus        58 Fv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk  135 (433)
T KOG0268|consen   58 FVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWK  135 (433)
T ss_pred             chhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeee
Confidence            445677999999999999977 7999999999999999999999999999999999999975  7899999999999998


Q ss_pred             ccccccccCCCCCCCCCC--------CCCCCCC---ce--ecccccEEEeCCCCcEEEEEEcCCCC-EEEEEeCCCcEEE
Q psy8430         232 AVINWECLNNDNDSDLDE--------SKEPDES---SI--TLRTPVKELLGHSNVVIAADWLSDGE-QVITASWDRVANL  297 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~--------~~~~~~~---~~--~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~v~i  297 (361)
                      +... ........+....        .....+.   .+  .-..|+..+......+.++.|+|-.. .|++|+.|+.|.+
T Consensus       136 ~~~~-p~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvL  214 (433)
T KOG0268|consen  136 IDGP-PLHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVL  214 (433)
T ss_pred             ccCC-cceeeeccccccccccccccccccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEE
Confidence            6542 1111111111100        0000010   11  11236777777788899999999655 5566779999999


Q ss_pred             eeCCCCeEEEEeec--CCCCCeE-----EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         298 FDVETGTILQSLTG--HDEEPHI-----LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       298 wd~~~~~~~~~~~~--h~~~v~~-----~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      ||++++.+++.+.-  -++.|.-     .+++++     .|.++..+  |+   |....++.++++|.+.|
T Consensus       215 yD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~-----ED~nlY~~--Dm---R~l~~p~~v~~dhvsAV  275 (433)
T KOG0268|consen  215 YDLRQASPLKKVILTMRTNTICWNPEAFNFVAAN-----EDHNLYTY--DM---RNLSRPLNVHKDHVSAV  275 (433)
T ss_pred             EecccCCccceeeeeccccceecCccccceeecc-----ccccceeh--hh---hhhcccchhhcccceeE
Confidence            99999988876642  1222211     455566     99999999  99   88778899999998764

>KOG0267|consensus

Probab=99.75  E-value=9.5e-19  Score=158.03  Aligned_cols=174  Identities=20%  Similarity=0.291  Sum_probs=150.4

Q ss_pred             EEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccc
Q psy8430         155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI  234 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~  234 (361)
                      +.+..|...|.|+..-..++.+++|+.|..+.+|.+....++..+.+|..+|.+|.|++...++++|+.+|+|++||+..
T Consensus        22 ~~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDlee  101 (825)
T KOG0267|consen   22 REFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEE  101 (825)
T ss_pred             hhhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhcccccCCceeeeehhh
Confidence            34557999999999877889999999999999999988888888999999999999999999999999999999999976


Q ss_pred             cccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCC
Q psy8430         235 NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE  314 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~  314 (361)
                      .                          ..++.+.||...+.++.|+|-+.|.++|+.|.-+++||++...|...+.+|..
T Consensus       102 A--------------------------k~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~  155 (825)
T KOG0267|consen  102 A--------------------------KIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTR  155 (825)
T ss_pred             h--------------------------hhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcc
Confidence            5                          35678899999999999999999999999999999999998899999999999


Q ss_pred             CCeEEEEEcCCCcc---cCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430         315 EPHILCVSSYYSKV---SCDLFQRIQHLDCGTSENPIHSVCVFQDIQST  360 (361)
Q Consensus       315 ~v~~~~~s~s~~~v---~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~  360 (361)
                      .+..+.+++++..+   +.|..++||  |.   +. +.....|.+|.+.
T Consensus       156 vv~~l~lsP~Gr~v~~g~ed~tvki~--d~---~a-gk~~~ef~~~e~~  198 (825)
T KOG0267|consen  156 VVDVLRLSPDGRWVASGGEDNTVKIW--DL---TA-GKLSKEFKSHEGK  198 (825)
T ss_pred             eeEEEeecCCCceeeccCCcceeeee--cc---cc-ccccccccccccc
Confidence            99986666553322   378999999  87   44 4556677777654

>KOG1273|consensus

Probab=99.75  E-value=4.1e-17  Score=134.29  Aligned_cols=176  Identities=16%  Similarity=0.113  Sum_probs=125.4

Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCC
Q psy8430         164 VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDN  243 (361)
Q Consensus       164 V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~  243 (361)
                      -.|+.|++.|.+||.|..||.|.|||+.+...-+.+.+|..+|++++|+++|+.|+|+|.|..|.+||+..+..+.....
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf  105 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRF  105 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEc
Confidence            77999999999999999999999999999888888999999999999999999999999999999999998875543332


Q ss_pred             CCCCCCCCCCCCC--------------ceecccccEEEeCC------CCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC
Q psy8430         244 DSDLDESKEPDES--------------SITLRTPVKELLGH------SNVVIAADWLSDGEQVITASWDRVANLFDVETG  303 (361)
Q Consensus       244 ~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~  303 (361)
                      .+.+-.....+..              ......+.+.+...      ........|++.|+++++|...|.+-++|..+.
T Consensus       106 ~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~  185 (405)
T KOG1273|consen  106 DSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETL  185 (405)
T ss_pred             cCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchh
Confidence            2222111110000              00011111211110      011222358889999999999999999999999


Q ss_pred             eEEEEeecCC-CCCeEEEEEcCCCc---ccCCCeEEEEcCCC
Q psy8430         304 TILQSLTGHD-EEPHILCVSSYYSK---VSCDLFQRIQHLDC  341 (361)
Q Consensus       304 ~~~~~~~~h~-~~v~~~~~s~s~~~---v~~dg~i~iW~~d~  341 (361)
                      +|+..+...+ ..|..+.++-.+.+   =+.|..||.|  +.
T Consensus       186 e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~y--e~  225 (405)
T KOG1273|consen  186 ECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTY--EI  225 (405)
T ss_pred             eeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEE--eh
Confidence            9999887655 44554333322111   1389999999  65

>KOG0642|consensus

Probab=99.75  E-value=4.1e-17  Score=143.85  Aligned_cols=199  Identities=21%  Similarity=0.200  Sum_probs=147.0

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC----------eEEEEEeCCCCCeEEEEEecCCCEE
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG----------KCVLQYSGHSGSVNSVRFLPNKDLV  218 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~----------~~~~~~~~h~~~v~~v~~~~~~~~l  218 (361)
                      ...+++.+|.+|.++|.|+++.+++..+++||.||+|+.|++...          .....+.||.+.|+.+++++....|
T Consensus       332 ~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~L  411 (577)
T KOG0642|consen  332 KDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRL  411 (577)
T ss_pred             cceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccce
Confidence            456899999999999999999999999999999999999966421          2345678999999999999999999


Q ss_pred             EEEECCCcEEEEeccccccccCCCCCCCCCCCCCC-------------CCC-----ceecccccEEEe-------CCCCc
Q psy8430         219 LSASGDKSVHIWQAVINWECLNNDNDSDLDESKEP-------------DES-----SITLRTPVKELL-------GHSNV  273 (361)
Q Consensus       219 ~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~-------------~~~-----~~~~~~~~~~~~-------~~~~~  273 (361)
                      ++++.||++++|+......+...............             ...     .......+..+.       .....
T Consensus       412 lscs~DgTvr~w~~~~~~~~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~  491 (577)
T KOG0642|consen  412 LSCSSDGTVRLWEPTEESPCTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQ  491 (577)
T ss_pred             eeecCCceEEeeccCCcCccccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCc
Confidence            99999999999998766553221111111100000             000     000001111111       01234


Q ss_pred             EEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCC
Q psy8430         274 VIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSE  345 (361)
Q Consensus       274 v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~  345 (361)
                      +..+.++|.+...+++..|+.|+++|..++.++.....|...+++        ++++++     .||.+++|++|.    
T Consensus       492 in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s-----~d~sv~l~kld~----  562 (577)
T KOG0642|consen  492 INKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGS-----HDGSVRLWKLDV----  562 (577)
T ss_pred             cceEEecCCCCeeEecccCCceecccccccccchheeeccceecceeecCCCceEEeec-----CCceeehhhccc----
Confidence            667789999999999999999999999999999999999998888        555666     999999997766    


Q ss_pred             Ccceeeeeecccc
Q psy8430         346 NPIHSVCVFQDIQ  358 (361)
Q Consensus       346 ~~~~~v~~~~~h~  358 (361)
                        ..|+....+|-
T Consensus       563 --k~~~~es~~~r  573 (577)
T KOG0642|consen  563 --KTCVLESTAHR  573 (577)
T ss_pred             --hheeecccccc
Confidence              56777766664

>KOG2445|consensus

Probab=99.75  E-value=5.4e-16  Score=127.34  Aligned_cols=212  Identities=19%  Similarity=0.223  Sum_probs=145.7

Q ss_pred             eccceeEEeee--cCccceeeeEEeeccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEeCCC---------CeEEEEEeC
Q psy8430         135 VQTSKIVSSFK--TSLLSCYKIRSFSGHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQT---------GKCVLQYSG  201 (361)
Q Consensus       135 ~~~~~~~~~~~--~~~~~~~~~~~l~~h~~~V~~l~~~~--~~~~l~s~s~d~~i~~wd~~~---------~~~~~~~~~  201 (361)
                      .+.+..+++|.  .++.+..+-...+.|.+.|+.+.|-+  -|+.+|+++.|+++.||.-..         .....++..
T Consensus        31 CSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~D  110 (361)
T KOG2445|consen   31 CSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVD  110 (361)
T ss_pred             ccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEeec
Confidence            34444455565  45577788888999999999999976  588999999999999998621         134455667


Q ss_pred             CCCCeEEEEEec--CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCC----------------------------
Q psy8430         202 HSGSVNSVRFLP--NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESK----------------------------  251 (361)
Q Consensus       202 h~~~v~~v~~~~--~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~----------------------------  251 (361)
                      ..+.|++|+|.|  -|-.+++++.||.++||+....-.+..=....++....                            
T Consensus       111 srssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvg  190 (361)
T KOG2445|consen  111 SRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVG  190 (361)
T ss_pred             CCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEE
Confidence            789999999999  47789999999999999865442222111111111000                            


Q ss_pred             CCC-------------CCceecccccEEEeCCCCcEEEEEEcCC----CCEEEEEeCCCcEEEeeCCCC-----------
Q psy8430         252 EPD-------------ESSITLRTPVKELLGHSNVVIAADWLSD----GEQVITASWDRVANLFDVETG-----------  303 (361)
Q Consensus       252 ~~~-------------~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~s~~~d~~v~iwd~~~~-----------  303 (361)
                      ...             .........+..+.+|..+|+.++|.|+    ...|++++.|| |+||.+...           
T Consensus       191 s~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~  269 (361)
T KOG2445|consen  191 SDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLA  269 (361)
T ss_pred             cccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccC
Confidence            000             0000111234456689999999999994    35789999999 999998731           


Q ss_pred             ---------eEEEEeecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeec
Q psy8430         304 ---------TILQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQ  355 (361)
Q Consensus       304 ---------~~~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~  355 (361)
                               +.+..+.+|.+.|..        ++.|.+     .||.||+|..++   .+.-.|..++.
T Consensus       270 ~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStG-----dDG~VRLWkany---~n~~kC~sv~~  330 (361)
T KOG2445|consen  270 PDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTG-----DDGCVRLWKANY---NNLWKCTSVLK  330 (361)
T ss_pred             CCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecC-----CCceeeehhhhh---hhhheeeeEEe
Confidence                     235567788888776        666777     999999996555   33344555554

>KOG1446|consensus

Probab=99.75  E-value=2.4e-16  Score=129.94  Aligned_cols=158  Identities=15%  Similarity=0.190  Sum_probs=135.9

Q ss_pred             eEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC--CCcEEEEe
Q psy8430         154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG--DKSVHIWQ  231 (361)
Q Consensus       154 ~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~--d~~i~lwd  231 (361)
                      .+.+..-.+.|+++.|+++|..+++++.|-++++||..+|+.+.++..+.-.|..++|-...+.++.++.  |.+|+.-+
T Consensus         7 ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLs   86 (311)
T KOG1446|consen    7 AKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLS   86 (311)
T ss_pred             ccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEE
Confidence            3455567788999999999999999999999999999999999999888888999999887787777776  88999998


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG  311 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~  311 (361)
                      +..+                          +.++.+.||...|.+++.+|-+..+++++.|++|++||++..+|...+..
T Consensus        87 l~dN--------------------------kylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~  140 (311)
T KOG1446|consen   87 LHDN--------------------------KYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNL  140 (311)
T ss_pred             eecC--------------------------ceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEec
Confidence            7655                          47888999999999999999999999999999999999999888888876


Q ss_pred             CCCCCeE------EEEEcCCCcccCCCeEEEEcCCCCCC
Q psy8430         312 HDEEPHI------LCVSSYYSKVSCDLFQRIQHLDCGTS  344 (361)
Q Consensus       312 h~~~v~~------~~~s~s~~~v~~dg~i~iW~~d~~~~  344 (361)
                      ...++.+      ++|.+.     ....|+||  |++..
T Consensus       141 ~~~pi~AfDp~GLifA~~~-----~~~~IkLy--D~Rs~  172 (311)
T KOG1446|consen  141 SGRPIAAFDPEGLIFALAN-----GSELIKLY--DLRSF  172 (311)
T ss_pred             CCCcceeECCCCcEEEEec-----CCCeEEEE--Eeccc
Confidence            6666665      556665     55699999  98543

>KOG4283|consensus

Probab=99.74  E-value=5.2e-17  Score=132.56  Aligned_cols=160  Identities=23%  Similarity=0.315  Sum_probs=129.4

Q ss_pred             eccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC---CCEEEEEECCCcEEEEecc
Q psy8430         158 SGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN---KDLVLSASGDKSVHIWQAV  233 (361)
Q Consensus       158 ~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~---~~~l~s~~~d~~i~lwd~~  233 (361)
                      .+|+-.|.++.|-| |-..|.++|.|.++++||..+.+....|. ..+.|.+-+|+|-   -.++++|..|-.|++.|+.
T Consensus        98 ~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~  176 (397)
T KOG4283|consen   98 NGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIA  176 (397)
T ss_pred             ccceeeeeeeEEeeecCceeecccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEecc
Confidence            47999999999999 55689999999999999999988888887 6788999999983   3467778888899999998


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCE-EEEEeCCCcEEEeeCCCC-eEEEEeec
Q psy8430         234 INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQ-VITASWDRVANLFDVETG-TILQSLTG  311 (361)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~d~~v~iwd~~~~-~~~~~~~~  311 (361)
                      ++                          ...+.+.||.+.|.++.|+|...+ |++|+.||.|++||++.. .|...+..
T Consensus       177 SG--------------------------s~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~  230 (397)
T KOG4283|consen  177 SG--------------------------SFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQ  230 (397)
T ss_pred             CC--------------------------cceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeec
Confidence            77                          478899999999999999998876 578999999999999864 55555554


Q ss_pred             C--------------CCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCC
Q psy8430         312 H--------------DEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSEN  346 (361)
Q Consensus       312 h--------------~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~  346 (361)
                      |              .+.+..+++|....   .++.|..+++|  +...|++
T Consensus       231 hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~w--n~~~G~n  280 (397)
T KOG4283|consen  231 HNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVW--NMESGRN  280 (397)
T ss_pred             ccCccCccccccccccceeeeeeecccchhhhhccCccceEEe--ecccCcc
Confidence            4              44444566666533   35689999999  7666655

>KOG0268|consensus

Probab=99.74  E-value=1e-17  Score=140.12  Aligned_cols=159  Identities=17%  Similarity=0.226  Sum_probs=131.2

Q ss_pred             ccceeeeEEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCc
Q psy8430         148 LLSCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS  226 (361)
Q Consensus       148 ~~~~~~~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~  226 (361)
                      .....++..+......|.++.|+|... +|++|+.|+.|.+||++++.++.... -...-+.|+|+|.+-.|++|+.|..
T Consensus       174 ~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi-~~mRTN~IswnPeafnF~~a~ED~n  252 (433)
T KOG0268|consen  174 EQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVI-LTMRTNTICWNPEAFNFVAANEDHN  252 (433)
T ss_pred             cccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceee-eeccccceecCccccceeecccccc
Confidence            345568888888889999999999655 78888899999999999998887766 4566789999998888999999999


Q ss_pred             EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEE
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  306 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~  306 (361)
                      +..||++.-                         ..|+....+|.+.|.++.|+|.|+-+++||.|.+|+||..+.+...
T Consensus       253 lY~~DmR~l-------------------------~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SR  307 (433)
T KOG0268|consen  253 LYTYDMRNL-------------------------SRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSR  307 (433)
T ss_pred             ceehhhhhh-------------------------cccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcch
Confidence            999998754                         3488889999999999999999999999999999999999876543


Q ss_pred             EEeecC-CCCCeE--------EEEEcCCCcccCCCeEEEE
Q psy8430         307 QSLTGH-DEEPHI--------LCVSSYYSKVSCDLFQRIQ  337 (361)
Q Consensus       307 ~~~~~h-~~~v~~--------~~~s~s~~~v~~dg~i~iW  337 (361)
                      -.+..- -..|.+        +++|||     .|+.||+|
T Consensus       308 diYhtkRMq~V~~Vk~S~Dskyi~SGS-----dd~nvRlW  342 (433)
T KOG0268|consen  308 DIYHTKRMQHVFCVKYSMDSKYIISGS-----DDGNVRLW  342 (433)
T ss_pred             hhhhHhhhheeeEEEEeccccEEEecC-----CCcceeee
Confidence            332110 011222        788888     99999999

>KOG0641|consensus

Probab=99.73  E-value=4.3e-16  Score=122.70  Aligned_cols=166  Identities=18%  Similarity=0.266  Sum_probs=131.4

Q ss_pred             eecCccceeeeEEeeccCCCeEEEE-EcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeC-------CCCCeEEEEEecCC
Q psy8430         144 FKTSLLSCYKIRSFSGHRDGVWDVA-VRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG-------HSGSVNSVRFLPNK  215 (361)
Q Consensus       144 ~~~~~~~~~~~~~l~~h~~~V~~l~-~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~-------h~~~v~~v~~~~~~  215 (361)
                      +..+-.+++..+-+.||++.|.++- |+  |-.+++|+.|.+|++||++-..++.++..       ..+.|.+++..|.|
T Consensus       166 y~tdc~~g~~~~a~sghtghilalyswn--~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsg  243 (350)
T KOG0641|consen  166 YITDCGRGQGFHALSGHTGHILALYSWN--GAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSG  243 (350)
T ss_pred             EEeecCCCCcceeecCCcccEEEEEEec--CcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCc
Confidence            3344466778889999999999883 65  67999999999999999998888877642       23689999999999


Q ss_pred             CEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcE
Q psy8430         216 DLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVA  295 (361)
Q Consensus       216 ~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v  295 (361)
                      ++|++|-.|..+.+||++.+                          +++..+..|...|.++.|+|...|+++++.|..|
T Consensus       244 rll~sg~~dssc~lydirg~--------------------------r~iq~f~phsadir~vrfsp~a~yllt~syd~~i  297 (350)
T KOG0641|consen  244 RLLASGHADSSCMLYDIRGG--------------------------RMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKI  297 (350)
T ss_pred             ceeeeccCCCceEEEEeeCC--------------------------ceeeeeCCCccceeEEEeCCCceEEEEecccceE
Confidence            99999999999999999876                          4788999999999999999999999999999999


Q ss_pred             EEeeCCCC----eEEEEeecCCCCCeEEEEEcC---CCcccCCCeEEEE
Q psy8430         296 NLFDVETG----TILQSLTGHDEEPHILCVSSY---YSKVSCDLFQRIQ  337 (361)
Q Consensus       296 ~iwd~~~~----~~~~~~~~h~~~v~~~~~s~s---~~~v~~dg~i~iW  337 (361)
                      ++-|+.-.    -++-....|...+..+-+-+.   |++.+.|.++.+|
T Consensus       298 kltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlw  346 (350)
T KOG0641|consen  298 KLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLW  346 (350)
T ss_pred             EEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEe
Confidence            99998721    122333446554443222221   2222399999999

>KOG0646|consensus

Probab=99.73  E-value=1.9e-16  Score=136.59  Aligned_cols=174  Identities=16%  Similarity=0.128  Sum_probs=140.8

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccC
Q psy8430         161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLN  240 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~  240 (361)
                      .++|.|++-+|+|.+|+.|+-.|.|++|.+.+|..+..+.+|-..|+|+.|+-||.+|+||+.||.|.+|.+..-..-. 
T Consensus        81 Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~-  159 (476)
T KOG0646|consen   81 PGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSAD-  159 (476)
T ss_pred             ccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccc-
Confidence            5889999999999999999999999999999999999999999999999999999999999999999999875321100 


Q ss_pred             CCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE
Q psy8430         241 NDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI  318 (361)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~  318 (361)
                                      ......|...+..|.-+|+.+...+.  ..++++++.|.++++||+..|..+.++.- ...+.+
T Consensus       160 ----------------~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~f-p~si~a  222 (476)
T KOG0646|consen  160 ----------------NDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITF-PSSIKA  222 (476)
T ss_pred             ----------------cCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEec-CCccee
Confidence                            00133478899999999999988764  46899999999999999999998887753 233333


Q ss_pred             --------EEEEcCCCcccCCCeEEEEcCCCCCCC------------Ccceeeeeeccccc
Q psy8430         319 --------LCVSSYYSKVSCDLFQRIQHLDCGTSE------------NPIHSVCVFQDIQS  359 (361)
Q Consensus       319 --------~~~s~s~~~v~~dg~i~iW~~d~~~~~------------~~~~~v~~~~~h~~  359 (361)
                              .++.|+     .+|.|.+-  ++....            .....+.+|.||.+
T Consensus       223 v~lDpae~~~yiGt-----~~G~I~~~--~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~  276 (476)
T KOG0646|consen  223 VALDPAERVVYIGT-----EEGKIFQN--LLFKLSGQSAGVNQKGRHEENTQINVLVGHEN  276 (476)
T ss_pred             EEEcccccEEEecC-----CcceEEee--ehhcCCcccccccccccccccceeeeeccccC
Confidence                    677777     99999888  442211            12346778888876

>KOG1034|consensus

Probab=99.72  E-value=4.2e-17  Score=134.94  Aligned_cols=146  Identities=25%  Similarity=0.413  Sum_probs=111.0

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCeEEEEEe---CCCCCeEEEEEecCCCEEEEEECC
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQYS---GHSGSVNSVRFLPNKDLVLSASGD  224 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~~~~~~~~~---~h~~~v~~v~~~~~~~~l~s~~~d  224 (361)
                      .+.++...+.+|.+.|+.+.+.|+ .+++++||.|.+|++|++++..++..|-   +|.+.|.++.|+++|.++++++.|
T Consensus       123 ~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmD  202 (385)
T KOG1034|consen  123 VSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMD  202 (385)
T ss_pred             chhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCc
Confidence            456778889999999999999995 4699999999999999999999998874   799999999999999999999999


Q ss_pred             CcEEEEeccccccccCCCCCCCCCCCCCCCCCceeccc-----c-cEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEe
Q psy8430         225 KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRT-----P-VKELLGHSNVVIAADWLSDGEQVITASWDRVANLF  298 (361)
Q Consensus       225 ~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iw  298 (361)
                      .++++|++....--..    .+......+.....+..+     | ..+-.-|+..|-++.|  -|.++++-+.++.|..|
T Consensus       203 hslk~W~l~~~~f~~~----lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw--~gd~ilSkscenaI~~w  276 (385)
T KOG1034|consen  203 HSLKLWRLNVKEFKNK----LELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRW--FGDFILSKSCENAIVCW  276 (385)
T ss_pred             ceEEEEecChhHHhhh----hhhhcccCCCCccCcCCccccccccccccccccchHHHHHH--HhhheeecccCceEEEE
Confidence            9999999974321100    000001111111101111     1 1133458899999999  58999999999999999


Q ss_pred             eC
Q psy8430         299 DV  300 (361)
Q Consensus       299 d~  300 (361)
                      ..
T Consensus       277 ~p  278 (385)
T KOG1034|consen  277 KP  278 (385)
T ss_pred             ec
Confidence            87

>KOG2445|consensus

Probab=99.72  E-value=1e-15  Score=125.74  Aligned_cols=184  Identities=19%  Similarity=0.256  Sum_probs=133.7

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC----eEEEEEeCCCCCeEEEEEec--CCCEEEEEECCCcEEEEec
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG----KCVLQYSGHSGSVNSVRFLP--NKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~----~~~~~~~~h~~~v~~v~~~~--~~~~l~s~~~d~~i~lwd~  232 (361)
                      +|..-|.|+.|++.|+.+|+|+.|.+|+|||....    .+...++.|.+.|..|.|.+  -|+.+++++.|+++.||.-
T Consensus        11 ~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE   90 (361)
T KOG2445|consen   11 GHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEE   90 (361)
T ss_pred             CCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeee
Confidence            89999999999999999999999999999996432    67778899999999999976  5899999999999999974


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC--CCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS--DGEQVITASWDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~d~~v~iwd~~~~~~~~~~~  310 (361)
                      ......                 .....+.....+...++.|+.+.|.|  -|-.+++++.||.+|||+.-.--.+..+.
T Consensus        91 ~~~~~~-----------------~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~  153 (361)
T KOG2445|consen   91 QEKSEE-----------------AHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWT  153 (361)
T ss_pred             cccccc-----------------cccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccch
Confidence            311100                 00112223455666788999999999  57789999999999999876433333222


Q ss_pred             -------------cCCCCCeEEEEEcC-----CCcccCCC------eEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         311 -------------GHDEEPHILCVSSY-----YSKVSCDL------FQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       311 -------------~h~~~v~~~~~s~s-----~~~v~~dg------~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                                   .+..+..|+-+..+     .+.|+.|.      .+.||  ......+.-..+..+.+|+++|
T Consensus       154 Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iy--e~~e~~rKw~kva~L~d~~dpI  226 (361)
T KOG2445|consen  154 LQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIY--EYNENGRKWLKVAELPDHTDPI  226 (361)
T ss_pred             hhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEE--EecCCcceeeeehhcCCCCCcc
Confidence                         12233333222222     22344555      89999  6655444477899999999876

>KOG1063|consensus

Probab=99.72  E-value=5.4e-17  Score=146.17  Aligned_cols=162  Identities=19%  Similarity=0.284  Sum_probs=132.2

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCc
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADR-----TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS  226 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~-----~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~  226 (361)
                      ..++.|-||.-.|++++.+|+|+++||+....     .|++|+..+...+..+.+|.-.|+.++|+|++++|+++|.|++
T Consensus       516 PEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt  595 (764)
T KOG1063|consen  516 PEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRT  595 (764)
T ss_pred             hhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCce
Confidence            45677889999999999999999999997653     5999999988888889999999999999999999999999999


Q ss_pred             EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC--e
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG--T  304 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~--~  304 (361)
                      +.+|.......                      ..........|+.-|+++.|+|++.+++|+|.|.+|.+|.....  +
T Consensus       596 ~sl~~~~~~~~----------------------~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~  653 (764)
T KOG1063|consen  596 VSLYEVQEDIK----------------------DEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDK  653 (764)
T ss_pred             EEeeeeecccc----------------------hhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhh
Confidence            99998743311                      01113346789999999999999999999999999999998876  4


Q ss_pred             EEEEe--ecCCCCCeE-------------EEEEcCCCcccCCCeEEEEcCC
Q psy8430         305 ILQSL--TGHDEEPHI-------------LCVSSYYSKVSCDLFQRIQHLD  340 (361)
Q Consensus       305 ~~~~~--~~h~~~v~~-------------~~~s~s~~~v~~dg~i~iW~~d  340 (361)
                      .+..+  ..++..|++             +++.|-     ..|.|.||+.+
T Consensus       654 ~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGl-----e~GeI~l~~~~  699 (764)
T KOG1063|consen  654 YISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGL-----EKGEIVLWRRK  699 (764)
T ss_pred             hhhhhchhccCCceeeEEeeccccccccceEEEEe-----cccEEEEEecc
Confidence            44332  236667776             344444     89999999544

>KOG2048|consensus

Probab=99.71  E-value=1.6e-15  Score=136.44  Aligned_cols=186  Identities=16%  Similarity=0.143  Sum_probs=137.3

Q ss_pred             ccceeEEeeecCccceeeeEEeeccC-CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC
Q psy8430         136 QTSKIVSSFKTSLLSCYKIRSFSGHR-DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN  214 (361)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~l~~h~-~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~  214 (361)
                      .++..+..|.... .+-+...+.|+. +.|.+++|.+ +..|++.+.+|+|.-||+.+++.+..+....+.|++++.+|.
T Consensus        44 Rt~g~IEiwN~~~-~w~~~~vi~g~~drsIE~L~W~e-~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~  121 (691)
T KOG2048|consen   44 RTDGNIEIWNLSN-NWFLEPVIHGPEDRSIESLAWAE-GGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPE  121 (691)
T ss_pred             ccCCcEEEEccCC-CceeeEEEecCCCCceeeEEEcc-CCeEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCc
Confidence            4445555555543 455566677764 7799999995 558889999999999999999999999989999999999999


Q ss_pred             CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc
Q psy8430         215 KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRV  294 (361)
Q Consensus       215 ~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~  294 (361)
                      +..++.||.||.+..+++..+.-                        +....+.-..+.|.+++|+|++..+++|+.||.
T Consensus       122 ~~~l~IgcddGvl~~~s~~p~~I------------------------~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~  177 (691)
T KOG2048|consen  122 NTILAIGCDDGVLYDFSIGPDKI------------------------TYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGV  177 (691)
T ss_pred             cceEEeecCCceEEEEecCCceE------------------------EEEeecccccceEEEEEecCCccEEEecccCce
Confidence            99999999999777776643311                        111222234689999999999999999999999


Q ss_pred             EEEeeCCCCeEEEEeecC-----C-CC--CeE-------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccc
Q psy8430         295 ANLFDVETGTILQSLTGH-----D-EE--PHI-------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQ  358 (361)
Q Consensus       295 v~iwd~~~~~~~~~~~~h-----~-~~--v~~-------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~  358 (361)
                      |++||..++..+......     . ..  |.+       .+++|+     .-|+|.+|  |..+    ...++.+..|.
T Consensus       178 Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~sgD-----S~G~V~FW--d~~~----gTLiqS~~~h~  245 (691)
T KOG2048|consen  178 IRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDSTIASGD-----SAGTVTFW--DSIF----GTLIQSHSCHD  245 (691)
T ss_pred             EEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecCcEEEec-----CCceEEEE--cccC----cchhhhhhhhh
Confidence            999999998876632211     1 11  111       677888     99999999  6632    33344444444

>KOG0639|consensus

Probab=99.70  E-value=1.2e-16  Score=139.00  Aligned_cols=157  Identities=15%  Similarity=0.223  Sum_probs=127.8

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC---eEEEEEe--CCCCCeEEEEEecCCCEEEEEECCCcEEEEecc
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG---KCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV  233 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~---~~~~~~~--~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~  233 (361)
                      .|...|..++++...+.+++|+. |.|+|||+...   .++..+.  .....|.++...|+|+.|++|+.-.++.|||+.
T Consensus       417 ~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLA  495 (705)
T KOG0639|consen  417 AHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLA  495 (705)
T ss_pred             ccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeecc
Confidence            48788888899998889999876 78999999643   2333332  356789999999999999999999999999986


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCC
Q psy8430         234 INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD  313 (361)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~  313 (361)
                      ....                        +....+......+++++.+||.+..++++.||.|.|||+.+...++.+++|+
T Consensus       496 apTp------------------------rikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGht  551 (705)
T KOG0639|consen  496 APTP------------------------RIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT  551 (705)
T ss_pred             CCCc------------------------chhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCC
Confidence            5421                        1223333444578899999999999999999999999999999999999999


Q ss_pred             CCCeEE--------EEEcCCCcccCCCeEEEEcCCCCCCCCc
Q psy8430         314 EEPHIL--------CVSSYYSKVSCDLFQRIQHLDCGTSENP  347 (361)
Q Consensus       314 ~~v~~~--------~~s~s~~~v~~dg~i~iW~~d~~~~~~~  347 (361)
                      ..+.|+        ++||+     -|.+||-|  |++++|.+
T Consensus       552 DGascIdis~dGtklWTGG-----lDntvRcW--Dlregrql  586 (705)
T KOG0639|consen  552 DGASCIDISKDGTKLWTGG-----LDNTVRCW--DLREGRQL  586 (705)
T ss_pred             CCceeEEecCCCceeecCC-----Cccceeeh--hhhhhhhh
Confidence            999994        55566     99999999  99777764

>KOG0321|consensus

Probab=99.69  E-value=1.1e-16  Score=142.96  Aligned_cols=146  Identities=24%  Similarity=0.402  Sum_probs=103.3

Q ss_pred             EEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEE--EeCCCCCeEEEEEec-CCCEEEEEECCCcEEEEe
Q psy8430         155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~--~~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~lwd  231 (361)
                      +....|.++|.++.|-|....|++++.|.++++||+.+++++..  +.||.+.|.+++|.| +...|++|+.||.|.|||
T Consensus        94 k~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD  173 (720)
T KOG0321|consen   94 KKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWD  173 (720)
T ss_pred             cccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEE
Confidence            44567999999999999777999999999999999999988777  889999999999999 456799999999999999


Q ss_pred             ccccccccCCCCCCCCCCCCC---CC--CCceecccccEEEeCCCCcEEE---EEEcCCCCEEEEEeC-CCcEEEeeCCC
Q psy8430         232 AVINWECLNNDNDSDLDESKE---PD--ESSITLRTPVKELLGHSNVVIA---ADWLSDGEQVITASW-DRVANLFDVET  302 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~v~~---~~~~~~~~~l~s~~~-d~~v~iwd~~~  302 (361)
                      ++-...-    ...++.....   ..  .......+.+.....+...+.+   +-+..|...|++++. |+.|+|||+++
T Consensus       174 ~R~n~~d----~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk  249 (720)
T KOG0321|consen  174 CRCNGVD----ALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRK  249 (720)
T ss_pred             Eeccchh----hHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecc
Confidence            9865310    1111111000   00  0111111122333344444444   344457888888887 99999999996


Q ss_pred             Ce
Q psy8430         303 GT  304 (361)
Q Consensus       303 ~~  304 (361)
                      ..
T Consensus       250 ~~  251 (720)
T KOG0321|consen  250 NY  251 (720)
T ss_pred             cc
Confidence            54

>KOG1036|consensus

Probab=99.69  E-value=1.1e-15  Score=125.63  Aligned_cols=149  Identities=17%  Similarity=0.256  Sum_probs=125.2

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccC
Q psy8430         161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLN  240 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~  240 (361)
                      ...|+++.|+|.++.|+.++-||++++||+........+. |..++.+++|.+ ...+++|+.||.|+.+|+.++     
T Consensus        13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~-----   85 (323)
T KOG1036|consen   13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTG-----   85 (323)
T ss_pred             hhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhee-cCCceeeeeccC-CceEEEeccCceEEEEEecCC-----
Confidence            4679999999999999999999999999998876666666 999999999986 567889999999999999877     


Q ss_pred             CCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE--
Q psy8430         241 NDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI--  318 (361)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~--  318 (361)
                                            ....+-.|..++.++.+++-...+++|+.|++|++||.+...+..++.. ...|.+  
T Consensus        86 ----------------------~~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~-~kkVy~~~  142 (323)
T KOG1036|consen   86 ----------------------NEDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQ-GKKVYCMD  142 (323)
T ss_pred             ----------------------cceeeccCCCceEEEEeeccCCeEEEcccCccEEEEecccccccccccc-CceEEEEe
Confidence                                  5566778999999999999888999999999999999997666655553 336666  


Q ss_pred             ----EEEEcCCCcccCCCeEEEEcCCCCCCCC
Q psy8430         319 ----LCVSSYYSKVSCDLFQRIQHLDCGTSEN  346 (361)
Q Consensus       319 ----~~~s~s~~~v~~dg~i~iW~~d~~~~~~  346 (361)
                          .++.|.     .|..+.+|  |+++.+.
T Consensus       143 v~g~~LvVg~-----~~r~v~iy--DLRn~~~  167 (323)
T KOG1036|consen  143 VSGNRLVVGT-----SDRKVLIY--DLRNLDE  167 (323)
T ss_pred             ccCCEEEEee-----cCceEEEE--Ecccccc
Confidence                445555     89999999  9966544

>KOG4378|consensus

Probab=99.68  E-value=1e-15  Score=133.14  Aligned_cols=194  Identities=15%  Similarity=0.130  Sum_probs=153.7

Q ss_pred             eeeeeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCC-CCCeEE
Q psy8430         130 TNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGH-SGSVNS  208 (361)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h-~~~v~~  208 (361)
                      .+...+..+.++.+|...  .-.+++.+++|+..|+++.++....+||+++..|-|.|-.+.++....+|... ...|.-
T Consensus        92 ~y~~sgG~~~~Vkiwdl~--~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRl  169 (673)
T KOG4378|consen   92 LYEISGGQSGCVKIWDLR--AKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRL  169 (673)
T ss_pred             eeeeccCcCceeeehhhH--HHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEE
Confidence            455566667777777664  44567788999999999999999999999999999999999998877777633 456779


Q ss_pred             EEEecCCCE-EEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC-CCEE
Q psy8430         209 VRFLPNKDL-VLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD-GEQV  286 (361)
Q Consensus       209 v~~~~~~~~-l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l  286 (361)
                      +.|+|..+. |.+++.+|.|.+||+....                         ........|..+...++|+|. ...|
T Consensus       170 l~ys~skr~lL~~asd~G~VtlwDv~g~s-------------------------p~~~~~~~HsAP~~gicfspsne~l~  224 (673)
T KOG4378|consen  170 LRYSPSKRFLLSIASDKGAVTLWDVQGMS-------------------------PIFHASEAHSAPCRGICFSPSNEALL  224 (673)
T ss_pred             eecccccceeeEeeccCCeEEEEeccCCC-------------------------cccchhhhccCCcCcceecCCccceE
Confidence            999997664 6688999999999986442                         123344679999999999994 5577


Q ss_pred             EEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccc
Q psy8430         287 ITASWDRVANLFDVETGTILQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQ  358 (361)
Q Consensus       287 ~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~  358 (361)
                      ++.+.|..|++||++......++.. +.+...        +++.|+     ..|.|..|  |+   |....+|.++.+|.
T Consensus       225 vsVG~Dkki~~yD~~s~~s~~~l~y-~~Plstvaf~~~G~~L~aG~-----s~G~~i~Y--D~---R~~k~Pv~v~sah~  293 (673)
T KOG4378|consen  225 VSVGYDKKINIYDIRSQASTDRLTY-SHPLSTVAFSECGTYLCAGN-----SKGELIAY--DM---RSTKAPVAVRSAHD  293 (673)
T ss_pred             EEecccceEEEeecccccccceeee-cCCcceeeecCCceEEEeec-----CCceEEEE--ec---ccCCCCceEeeecc
Confidence            8999999999999998777766653 333333        566666     89999999  99   87788999999998


Q ss_pred             cCC
Q psy8430         359 STG  361 (361)
Q Consensus       359 ~~~  361 (361)
                      ..|
T Consensus       294 ~sV  296 (673)
T KOG4378|consen  294 ASV  296 (673)
T ss_pred             cce
Confidence            654

>KOG1539|consensus

Probab=99.67  E-value=3.1e-15  Score=137.61  Aligned_cols=171  Identities=20%  Similarity=0.211  Sum_probs=131.6

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEE---eCCCCCeEEEEEecCCCEEEEEECCCcEEEEecccccc
Q psy8430         161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY---SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE  237 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~---~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~  237 (361)
                      ...+++++.++.|++.+.|...|+|-+|++++|-....|   +.|.++|+.++...-++.+++++.+|.+++||..+...
T Consensus       448 ~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l  527 (910)
T KOG1539|consen  448 DINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVL  527 (910)
T ss_pred             CcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcce
Confidence            377999999999999999999999999999999888888   58999999999988888999999999999999987653


Q ss_pred             ccCCCCCCCCCCCCC----------CCC-----CceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC
Q psy8430         238 CLNNDNDSDLDESKE----------PDE-----SSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET  302 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~----------~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~  302 (361)
                      ...-..........+          .+.     .....+..++.+.||.+.+++++|||+|+||++++.|++|++||+.+
T Consensus       528 ~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt  607 (910)
T KOG1539|consen  528 KKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPT  607 (910)
T ss_pred             eeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccC
Confidence            222111111111000          000     01223345677889999999999999999999999999999999999


Q ss_pred             CeEEEEeecCCCCCeE--------EEEEcCCCcccCC-CeEEEE
Q psy8430         303 GTILQSLTGHDEEPHI--------LCVSSYYSKVSCD-LFQRIQ  337 (361)
Q Consensus       303 ~~~~~~~~~h~~~v~~--------~~~s~s~~~v~~d-g~i~iW  337 (361)
                      +.++-.+.- ..+...        +++|..     .| .-|++|
T Consensus       608 ~~lID~~~v-d~~~~sls~SPngD~LAT~H-----vd~~gIylW  645 (910)
T KOG1539|consen  608 GTLIDGLLV-DSPCTSLSFSPNGDFLATVH-----VDQNGIYLW  645 (910)
T ss_pred             cceeeeEec-CCcceeeEECCCCCEEEEEE-----ecCceEEEE
Confidence            999877753 333334        455544     56 788999

>KOG1009|consensus

Probab=99.67  E-value=1.5e-15  Score=129.11  Aligned_cols=167  Identities=22%  Similarity=0.344  Sum_probs=128.3

Q ss_pred             CCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCC---------eEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEE
Q psy8430         161 RDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTG---------KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  230 (361)
Q Consensus       161 ~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~---------~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lw  230 (361)
                      ..+|.++.|.++.. .|+||+.|..|++|.+..+         +....+..|...|++|.|+|+|.++++|+.+|.+.+|
T Consensus        13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lW   92 (434)
T KOG1009|consen   13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLW   92 (434)
T ss_pred             CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEE
Confidence            47799999999766 9999999999999988543         2344567899999999999999999999999999999


Q ss_pred             eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430         231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~  310 (361)
                      -....   .....      .. ........+...+.+.+|...++.++|+|++.++++++.|+++++||+..|.....+.
T Consensus        93 k~~~~---~~~~~------d~-e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~  162 (434)
T KOG1009|consen   93 KQGDV---RIFDA------DT-EADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILD  162 (434)
T ss_pred             EecCc---CCccc------cc-hhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeecc
Confidence            75421   00000      00 0000112234566778899999999999999999999999999999999999999999


Q ss_pred             cCCCCCeEEEEEcCCC---cccCCCeEEEE
Q psy8430         311 GHDEEPHILCVSSYYS---KVSCDLFQRIQ  337 (361)
Q Consensus       311 ~h~~~v~~~~~s~s~~---~v~~dg~i~iW  337 (361)
                      .|...+..+.+-+-.-   ..+.|...++.
T Consensus       163 dh~~yvqgvawDpl~qyv~s~s~dr~~~~~  192 (434)
T KOG1009|consen  163 DHEHYVQGVAWDPLNQYVASKSSDRHPEGF  192 (434)
T ss_pred             ccccccceeecchhhhhhhhhccCccccee
Confidence            9999888754443311   22477777777

>KOG0270|consensus

Probab=99.66  E-value=5e-16  Score=133.32  Aligned_cols=161  Identities=18%  Similarity=0.236  Sum_probs=121.7

Q ss_pred             eEEEEEcC-------CCCEEEEEeCCCcEEEEeCCCC---eEE------------------EEEeCCCCCeEEEEEecC-
Q psy8430         164 VWDVAVRP-------GQPVLGSASADRTVRLWSTQTG---KCV------------------LQYSGHSGSVNSVRFLPN-  214 (361)
Q Consensus       164 V~~l~~~~-------~~~~l~s~s~d~~i~~wd~~~~---~~~------------------~~~~~h~~~v~~v~~~~~-  214 (361)
                      -.|++|-.       -|+++|.|..|..|.|||+.--   .+.                  ..-.+|+..|..+.|+.. 
T Consensus       176 PLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~  255 (463)
T KOG0270|consen  176 PLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNF  255 (463)
T ss_pred             chhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhcccc
Confidence            35666533       3679999999999999998621   111                  112369999999999874 


Q ss_pred             CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCC
Q psy8430         215 KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDR  293 (361)
Q Consensus       215 ~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~  293 (361)
                      .+.|++||.|.+|++||+.++                          +|...+..|...|.+++|+| ...+|++|+.|+
T Consensus       256 ~nVLaSgsaD~TV~lWD~~~g--------------------------~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~  309 (463)
T KOG0270|consen  256 RNVLASGSADKTVKLWDVDTG--------------------------KPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDG  309 (463)
T ss_pred             ceeEEecCCCceEEEEEcCCC--------------------------CcceehhhcCCceeEEEecCCCceEEEeccccc
Confidence            457999999999999999887                          36777778999999999999 567899999999


Q ss_pred             cEEEeeCCCCeEE-EEeecCCCCCe---------EEEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         294 VANLFDVETGTIL-QSLTGHDEEPH---------ILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       294 ~v~iwd~~~~~~~-~~~~~h~~~v~---------~~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      +|.+.|.|...+. ..|+ -.+.|-         ..++.+.     .||+|+=+  |.   |++..++-++++|.++|
T Consensus       310 ~V~l~D~R~~~~s~~~wk-~~g~VEkv~w~~~se~~f~~~t-----ddG~v~~~--D~---R~~~~~vwt~~AHd~~I  376 (463)
T KOG0270|consen  310 TVALKDCRDPSNSGKEWK-FDGEVEKVAWDPHSENSFFVST-----DDGTVYYF--DI---RNPGKPVWTLKAHDDEI  376 (463)
T ss_pred             eEEeeeccCccccCceEE-eccceEEEEecCCCceeEEEec-----CCceEEee--ec---CCCCCceeEEEeccCCc
Confidence            9999999932211 1111 111111         1455566     89999999  99   99889999999998865

>KOG1036|consensus

Probab=99.66  E-value=1.8e-14  Score=118.56  Aligned_cols=75  Identities=21%  Similarity=0.320  Sum_probs=66.6

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecccc
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN  235 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~  235 (361)
                      .|.+++.+++|.++ ..+++|+.||.|+.+|+.++... .+..|..+|.||.+++....+++|+.|++|++||.+..
T Consensus        52 ~~~~plL~c~F~d~-~~~~~G~~dg~vr~~Dln~~~~~-~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~  126 (323)
T KOG1036|consen   52 KHGAPLLDCAFADE-STIVTGGLDGQVRRYDLNTGNED-QIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNK  126 (323)
T ss_pred             ecCCceeeeeccCC-ceEEEeccCceEEEEEecCCcce-eeccCCCceEEEEeeccCCeEEEcccCccEEEEecccc
Confidence            58999999999984 48899999999999999887644 44569999999999998889999999999999999864

>KOG1408|consensus

Probab=99.66  E-value=1.5e-15  Score=137.50  Aligned_cols=166  Identities=17%  Similarity=0.191  Sum_probs=135.0

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCC--CEEEEEeCCCcEEEEeCCCCeEEEEEeCC-----CCCeEEEEEecCCCEEEEEE
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQ--PVLGSASADRTVRLWSTQTGKCVLQYSGH-----SGSVNSVRFLPNKDLVLSAS  222 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~--~~l~s~s~d~~i~~wd~~~~~~~~~~~~h-----~~~v~~v~~~~~~~~l~s~~  222 (361)
                      ...++.++.+|...|+++.|-..|  ...+++|.|..|.+--.+.......|..|     ...+..++..|..+++++++
T Consensus       536 ny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~c  615 (1080)
T KOG1408|consen  536 NYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVC  615 (1080)
T ss_pred             ccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEe
Confidence            445678899999999999999877  58999999998865333322222223222     35788999999999999999


Q ss_pred             CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC
Q psy8430         223 GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET  302 (361)
Q Consensus       223 ~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~  302 (361)
                      .|+.|+|||+.+++.+.                       ..+.-.+|.+....+...|.|-|+++.+.|.++.++|+.+
T Consensus       616 QDrnirif~i~sgKq~k-----------------------~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~s  672 (1080)
T KOG1408|consen  616 QDRNIRIFDIESGKQVK-----------------------SFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVS  672 (1080)
T ss_pred             cccceEEEeccccceee-----------------------eecccccCCCceEEEEECCCccEEEEeecCCceEEEEecc
Confidence            99999999998875432                       2233345777788899999999999999999999999999


Q ss_pred             CeEEEEeecCCCCCeEEEEEcC---CCcccCCCeEEEEc
Q psy8430         303 GTILQSLTGHDEEPHILCVSSY---YSKVSCDLFQRIQH  338 (361)
Q Consensus       303 ~~~~~~~~~h~~~v~~~~~s~s---~~~v~~dg~i~iW~  338 (361)
                      |+|+.++.||+..|+.+.|+.+   .++|+.||.|.||.
T Consensus       673 gEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~  711 (1080)
T KOG1408|consen  673 GECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWK  711 (1080)
T ss_pred             chhhhhhcCcchheeeeeecccchhheeecCCceEEEEE
Confidence            9999999999999999888877   55788999999993

>KOG1445|consensus

Probab=99.66  E-value=8e-16  Score=137.58  Aligned_cols=118  Identities=22%  Similarity=0.396  Sum_probs=104.2

Q ss_pred             CCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCC-------eEEEEEeCCCCCeEEEEEec-CCCEEEEEECCCcEEEEe
Q psy8430         161 RDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTG-------KCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       161 ~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~-------~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~lwd  231 (361)
                      ...|+++.|+| |...|+.++.||.|++|.+..+       .+...+.+|...|+++.|+| -.+.|++++.|-+|++||
T Consensus       627 gt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWD  706 (1012)
T KOG1445|consen  627 GTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWD  706 (1012)
T ss_pred             CceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeee
Confidence            46799999999 7789999999999999998654       34566788999999999999 456899999999999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCe
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT  304 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~  304 (361)
                      +.+..                          ....+.+|.+.|..++|+|+|+.+++.+.||+|++|..++++
T Consensus       707 l~~~~--------------------------~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e  753 (1012)
T KOG1445|consen  707 LANAK--------------------------LYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSRE  753 (1012)
T ss_pred             hhhhh--------------------------hhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCC
Confidence            98763                          456788999999999999999999999999999999988653

>KOG0649|consensus

Probab=99.66  E-value=4.8e-15  Score=118.09  Aligned_cols=167  Identities=20%  Similarity=0.231  Sum_probs=122.5

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC---------C-eEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430         162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQT---------G-KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~---------~-~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd  231 (361)
                      ..|..-+|+|.+++|+.|+.+|+|.+..+.+         | ..+..+++|+++|..++|.  ...|++|+ ||.|+-|.
T Consensus        11 ~tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~   87 (325)
T KOG0649|consen   11 NTVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWE   87 (325)
T ss_pred             HHHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeecc-CceEEEee
Confidence            3466667999999999999999999998853         2 3566678999999999997  34566655 59999998


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG  311 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~  311 (361)
                      .+...+......             .+....|.+.-...-..|+++...|..+-++.++.|+.++-||+++|+...++.+
T Consensus        88 W~E~~es~~~K~-------------lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rG  154 (325)
T KOG0649|consen   88 WNEEEESLATKR-------------LWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRG  154 (325)
T ss_pred             ehhhhhhccchh-------------hhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcC
Confidence            765433111000             0111112222122334689999999888888888999999999999999999999


Q ss_pred             CCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeec
Q psy8430         312 HDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQ  355 (361)
Q Consensus       312 h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~  355 (361)
                      |+..+.+        -++||+     .||++|||  |+   +. .++|.++.
T Consensus       155 HtDYvH~vv~R~~~~qilsG~-----EDGtvRvW--d~---kt-~k~v~~ie  195 (325)
T KOG0649|consen  155 HTDYVHSVVGRNANGQILSGA-----EDGTVRVW--DT---KT-QKHVSMIE  195 (325)
T ss_pred             CcceeeeeeecccCcceeecC-----CCccEEEE--ec---cc-cceeEEec
Confidence            9999988        456677     99999999  98   44 44555543

>KOG1274|consensus

Probab=99.65  E-value=1.8e-14  Score=133.94  Aligned_cols=163  Identities=16%  Similarity=0.145  Sum_probs=127.3

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccc
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC  238 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~  238 (361)
                      ..+-++.+++|+.+|+++|.||.|-.|++-+.........+++|.++|.++.|+|.+++||+.+.||.|++||+..+...
T Consensus        94 Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~  173 (933)
T KOG1274|consen   94 RFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILS  173 (933)
T ss_pred             eeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhh
Confidence            34578999999999999999999999999999999889999999999999999999999999999999999999876432


Q ss_pred             cCCCCCCCCCCCCCCCCCceecccccEEEeC-CCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec--CCCC
Q psy8430         239 LNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG--HDEE  315 (361)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~--h~~~  315 (361)
                      .....                   ....... ....+..++|+|+|..++..+.|+.|.+|+....+....+..  ++..
T Consensus       174 ~tl~~-------------------v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~  234 (933)
T KOG1274|consen  174 KTLTG-------------------VDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSK  234 (933)
T ss_pred             hhccc-------------------CCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccc
Confidence            21100                   0011111 155678899999998999999999999999999988888764  3333


Q ss_pred             CeEEEEEcCCCc---ccCCCeEEEEcCC
Q psy8430         316 PHILCVSSYYSK---VSCDLFQRIQHLD  340 (361)
Q Consensus       316 v~~~~~s~s~~~---v~~dg~i~iW~~d  340 (361)
                      +..+-+++.+-|   +..||.|-|||.|
T Consensus       235 ~~~~~wsPnG~YiAAs~~~g~I~vWnv~  262 (933)
T KOG1274|consen  235 FSDLQWSPNGKYIAASTLDGQILVWNVD  262 (933)
T ss_pred             eEEEEEcCCCcEEeeeccCCcEEEEecc
Confidence            444334433221   2399999999544

>KOG0303|consensus

Probab=99.65  E-value=2e-15  Score=127.85  Aligned_cols=136  Identities=25%  Similarity=0.304  Sum_probs=110.8

Q ss_pred             EeCCCCCeEEEEEec-CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEE
Q psy8430         199 YSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAA  277 (361)
Q Consensus       199 ~~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  277 (361)
                      +.||.++|..++|+| +.+.+||||.|.+|.||++..+...                   .....++..+.||...|-.+
T Consensus        77 v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~-------------------~~ltepvv~L~gH~rrVg~V  137 (472)
T KOG0303|consen   77 VCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLT-------------------RDLTEPVVELYGHQRRVGLV  137 (472)
T ss_pred             ccCccccccccccCccCCceeecCCCCceEEEEECCCcccc-------------------cCcccceEEEeecceeEEEE
Confidence            568999999999999 6678999999999999998765332                   22335889999999999999


Q ss_pred             EEcCC-CCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeee
Q psy8430         278 DWLSD-GEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCV  353 (361)
Q Consensus       278 ~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~  353 (361)
                      +|||. .+.|++++.|.+|.+|++.||+.+-++. |...|.++.++.++.   ..+.|..||||  |.   |. ...|..
T Consensus       138 ~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~--dp---r~-~~~v~e  210 (472)
T KOG0303|consen  138 QWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVI--DP---RR-GTVVSE  210 (472)
T ss_pred             eecccchhhHhhccCCceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEE--cC---CC-CcEeee
Confidence            99994 5688999999999999999999999988 998888844433322   22399999999  99   66 566777


Q ss_pred             ecccccC
Q psy8430         354 FQDIQST  360 (361)
Q Consensus       354 ~~~h~~~  360 (361)
                      -.+|.+.
T Consensus       211 ~~~heG~  217 (472)
T KOG0303|consen  211 GVAHEGA  217 (472)
T ss_pred             cccccCC
Confidence            7888763

>KOG0642|consensus

Probab=99.65  E-value=2.5e-15  Score=132.75  Aligned_cols=139  Identities=24%  Similarity=0.350  Sum_probs=114.4

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC--------CeEEEEEeCCCCCeEEEEEecCCCEEEEEE
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT--------GKCVLQYSGHSGSVNSVRFLPNKDLVLSAS  222 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~--------~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~  222 (361)
                      +.+-.++..|...|..+.|.|....|++|+.||++++|+++.        -+++.+|++|.++|.|+++.+.+..+++|+
T Consensus       284 w~ik~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg  363 (577)
T KOG0642|consen  284 WNIKFTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGG  363 (577)
T ss_pred             cceeeeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeec
Confidence            444557888999999999999999999999999999999932        167899999999999999999999999999


Q ss_pred             CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC
Q psy8430         223 GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET  302 (361)
Q Consensus       223 ~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~  302 (361)
                      .||+|+.|++... .-.               ............+.||...|+.+++|+....|++++.||++++|+...
T Consensus       364 ~Dg~I~~w~~p~n-~dp---------------~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~  427 (577)
T KOG0642|consen  364 IDGTIRCWNLPPN-QDP---------------DDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTE  427 (577)
T ss_pred             cCceeeeeccCCC-CCc---------------ccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCC
Confidence            9999999987511 100               001112234567889999999999999999999999999999999765


Q ss_pred             CeE
Q psy8430         303 GTI  305 (361)
Q Consensus       303 ~~~  305 (361)
                      ..+
T Consensus       428 ~~~  430 (577)
T KOG0642|consen  428 ESP  430 (577)
T ss_pred             cCc
Confidence            443

>KOG1007|consensus

Probab=99.65  E-value=1.4e-15  Score=123.98  Aligned_cols=153  Identities=25%  Similarity=0.337  Sum_probs=123.6

Q ss_pred             ccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCeEEEEEe-CCCCCeEEEEEecCCC-EEEEEECCCcEEEEeccc
Q psy8430         159 GHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAVI  234 (361)
Q Consensus       159 ~h~~~V~~l~~~~--~~~~l~s~s~d~~i~~wd~~~~~~~~~~~-~h~~~v~~v~~~~~~~-~l~s~~~d~~i~lwd~~~  234 (361)
                      +|+...++-+|+|  +|+.+++. .|+++..||+++.++...+. .|...|..+.|+|+.+ +|++|+.||.|++||.+.
T Consensus       168 e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~  246 (370)
T KOG1007|consen  168 EMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRK  246 (370)
T ss_pred             cccceecccccCCCCccceEEEe-CCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccC
Confidence            3677788889999  67677665 57899999999877666664 6889999999999765 588999999999999876


Q ss_pred             cccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEeeCCCC----------
Q psy8430         235 NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD-GEQVITASWDRVANLFDVETG----------  303 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~v~iwd~~~~----------  303 (361)
                      .+                         .|+..+.+|..+|+++.|+|. ..++++|+.|..|.+|...+-          
T Consensus       247 tk-------------------------~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~  301 (370)
T KOG1007|consen  247 TK-------------------------FPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFED  301 (370)
T ss_pred             CC-------------------------ccccccCCCceEEEEEEecCccceEEEecCCCceeEEEecccccccccccccc
Confidence            53                         388999999999999999994 457789999999999975421          


Q ss_pred             -------------------eEEEEeecCCCCCeEEEEEcC----CCcccCCCeEEEE
Q psy8430         304 -------------------TILQSLTGHDEEPHILCVSSY----YSKVSCDLFQRIQ  337 (361)
Q Consensus       304 -------------------~~~~~~~~h~~~v~~~~~s~s----~~~v~~dg~i~iW  337 (361)
                                         ..+.++..|...|+++.+|..    |+++++||.+-|=
T Consensus       302 dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs  358 (370)
T KOG1007|consen  302 DESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIIS  358 (370)
T ss_pred             ccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCceEEee
Confidence                               135678889999999666655    5566799999876

>KOG1034|consensus

Probab=99.65  E-value=1.4e-15  Score=125.95  Aligned_cols=153  Identities=23%  Similarity=0.408  Sum_probs=124.6

Q ss_pred             ccCCCeEEEEEcCC----CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC-CCEEEEEECCCcEEEEecc
Q psy8430         159 GHRDGVWDVAVRPG----QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN-KDLVLSASGDKSVHIWQAV  233 (361)
Q Consensus       159 ~h~~~V~~l~~~~~----~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~i~lwd~~  233 (361)
                      .|......++|+-+    ..++|.||.-|.|+|.|+.++++...+.+|...|+.+.|+|. .++++++|.|.+|++|+++
T Consensus        87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~  166 (385)
T KOG1034|consen   87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQ  166 (385)
T ss_pred             CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEecc
Confidence            37778888888753    348999999999999999999999999999999999999995 5789999999999999998


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE------E-
Q psy8430         234 INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI------L-  306 (361)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~------~-  306 (361)
                      +..++.                       ...-+.||...|.++.|+++|.++++++.|.++++|++...+.      . 
T Consensus       167 ~~~Cv~-----------------------VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~  223 (385)
T KOG1034|consen  167 TDVCVA-----------------------VFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSI  223 (385)
T ss_pred             CCeEEE-----------------------EecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhc
Confidence            774321                       2344568999999999999999999999999999999983221      0 


Q ss_pred             ------------------E---EeecCCCCCeE------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         307 ------------------Q---SLTGHDEEPHI------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       307 ------------------~---~~~~h~~~v~~------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                                        .   +-..|...|.|      +++|-+     .++.|..|  -.
T Consensus       224 ~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~gd~ilSks-----cenaI~~w--~p  278 (385)
T KOG1034|consen  224 TYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFGDFILSKS-----CENAIVCW--KP  278 (385)
T ss_pred             ccCCCCccCcCCccccccccccccccccchHHHHHHHhhheeecc-----cCceEEEE--ec
Confidence                              0   11235555555      777777     99999999  55

>KOG1408|consensus

Probab=99.65  E-value=1.5e-15  Score=137.59  Aligned_cols=192  Identities=19%  Similarity=0.243  Sum_probs=140.0

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec---CCCEEEEEECCCcEEEEecccc
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP---NKDLVLSASGDKSVHIWQAVIN  235 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~---~~~~l~s~~~d~~i~lwd~~~~  235 (361)
                      +.+-.|.+++++|+|.+||+|..-|++++|++..-+....+..|...|.|+.|+-   ..++|++++.|.-|+|+|+...
T Consensus       457 d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rn  536 (1080)
T KOG1408|consen  457 DSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRN  536 (1080)
T ss_pred             CcccceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccc
Confidence            4456799999999999999999999999999998888888899999999999985   3567999999999999999766


Q ss_pred             ccccCCCCC--CCCCCCCC---C---------CCCceecc--c---ccEEEe-----CCCCcEEEEEEcCCCCEEEEEeC
Q psy8430         236 WECLNNDND--SDLDESKE---P---------DESSITLR--T---PVKELL-----GHSNVVIAADWLSDGEQVITASW  291 (361)
Q Consensus       236 ~~~~~~~~~--~~~~~~~~---~---------~~~~~~~~--~---~~~~~~-----~~~~~v~~~~~~~~~~~l~s~~~  291 (361)
                      .........  ..+.....   .         .......+  +   ....+.     .....++.|++.|..+++++++.
T Consensus       537 y~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQ  616 (1080)
T KOG1408|consen  537 YDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQ  616 (1080)
T ss_pred             cchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEec
Confidence            443321111  11100000   0         00000000  0   001111     12357899999999999999999


Q ss_pred             CCcEEEeeCCCCeEEEEeec---CCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430         292 DRVANLFDVETGTILQSLTG---HDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST  360 (361)
Q Consensus       292 d~~v~iwd~~~~~~~~~~~~---h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~  360 (361)
                      |+.|+|||+.+|+..+.+++   |.+....        ++++..     .|.++.++  |+   -. +.||....||...
T Consensus       617 Drnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atSc-----sdktl~~~--Df---~s-gEcvA~m~GHsE~  685 (1080)
T KOG1408|consen  617 DRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSC-----SDKTLCFV--DF---VS-GECVAQMTGHSEA  685 (1080)
T ss_pred             ccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEee-----cCCceEEE--Ee---cc-chhhhhhcCcchh
Confidence            99999999999999999986   3343333        555555     89999999  88   33 7789999999875


Q ss_pred             C
Q psy8430         361 G  361 (361)
Q Consensus       361 ~  361 (361)
                      |
T Consensus       686 V  686 (1080)
T KOG1408|consen  686 V  686 (1080)
T ss_pred             e
Confidence            4

>KOG4328|consensus

Probab=99.64  E-value=9.9e-15  Score=125.90  Aligned_cols=175  Identities=21%  Similarity=0.212  Sum_probs=126.2

Q ss_pred             cceeeeEEeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCe---------------------------------
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGK---------------------------------  194 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~---------------------------------  194 (361)
                      .+..-+..+..|.++|.++.|+| +-..+++.|.||+|++-|++.+.                                 
T Consensus       222 ~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G  301 (498)
T KOG4328|consen  222 KDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVG  301 (498)
T ss_pred             CccCceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeeccc
Confidence            34456777889999999999999 45589999999999998876321                                 


Q ss_pred             ------------EEEEEeCCCCCeEEEEEec-CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecc
Q psy8430         195 ------------CVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLR  261 (361)
Q Consensus       195 ------------~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (361)
                                  ....+.-|...|++|+++| ...+++|++.|++.+|||++.-..                      ..
T Consensus       302 ~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~----------------------K~  359 (498)
T KOG4328|consen  302 NFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRG----------------------KA  359 (498)
T ss_pred             ceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcC----------------------CC
Confidence                        0011234777999999999 456799999999999999985421                      11


Q ss_pred             cccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCC----CCeEEEEeecCCCC--------------CeEEEEEc
Q psy8430         262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE----TGTILQSLTGHDEE--------------PHILCVSS  323 (361)
Q Consensus       262 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~----~~~~~~~~~~h~~~--------------v~~~~~s~  323 (361)
                      .|......|...|.++.|||.+..|+|.+.|..|+|||..    .-.+..++. |...              -..+++.+
T Consensus       360 sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~-Hn~~t~RwlT~fKA~W~P~~~li~vg  438 (498)
T KOG4328|consen  360 SPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIP-HNNRTGRWLTPFKAAWDPDYNLIVVG  438 (498)
T ss_pred             CcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceee-ccCcccccccchhheeCCCccEEEEe
Confidence            1455666899999999999998889999999999999983    222223332 2211              12277777


Q ss_pred             CCCcccCCCeEEEEcCCCCCCCCcceeeeeeccc
Q psy8430         324 YYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDI  357 (361)
Q Consensus       324 s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h  357 (361)
                      .     +-..|-|+  |-   .. ++.|+.|.+.
T Consensus       439 ~-----~~r~IDv~--~~---~~-~q~v~el~~P  461 (498)
T KOG4328|consen  439 R-----YPRPIDVF--DG---NG-GQMVCELHDP  461 (498)
T ss_pred             c-----cCcceeEE--cC---CC-CEEeeeccCc
Confidence            7     77778888  76   22 5556665443

>KOG4328|consensus

Probab=99.62  E-value=7.1e-15  Score=126.77  Aligned_cols=181  Identities=17%  Similarity=0.167  Sum_probs=134.9

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCC--EEEEEeCCCcEEEEeCCCC----eEEEEEeCCCCCeEEEEEec-CCCEEEEE
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQP--VLGSASADRTVRLWSTQTG----KCVLQYSGHSGSVNSVRFLP-NKDLVLSA  221 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~--~l~s~s~d~~i~~wd~~~~----~~~~~~~~h~~~v~~v~~~~-~~~~l~s~  221 (361)
                      .+......++-|.+.|++++|+|..+  ++++|..-|+|-+||+.+.    ..+..+..|..+|.++.|+| +...+++.
T Consensus       174 ~~~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ss  253 (498)
T KOG4328|consen  174 DDYRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSS  253 (498)
T ss_pred             ccceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeee
Confidence            44455556677899999999999655  8899999999999999522    33556778999999999999 55679999


Q ss_pred             ECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCC
Q psy8430         222 SGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  301 (361)
Q Consensus       222 ~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~  301 (361)
                      |.||+|++-|+....                        ...+..+.......+++.|+.....++.+..=|.+.+||.+
T Consensus       254 SyDGtiR~~D~~~~i------------------------~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R  309 (498)
T KOG4328|consen  254 SYDGTIRLQDFEGNI------------------------SEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLR  309 (498)
T ss_pred             ccCceeeeeeecchh------------------------hHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEee
Confidence            999999999987541                        11233333455677888998888888888888899999999


Q ss_pred             CCeE-EEEeecCCCCCeE---------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430         302 TGTI-LQSLTGHDEEPHI---------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST  360 (361)
Q Consensus       302 ~~~~-~~~~~~h~~~v~~---------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~  360 (361)
                      ++.. ...+.-|...|..         +++|++     -|++++||  |++..+....++-....|...
T Consensus       310 ~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s-----~D~T~kIW--D~R~l~~K~sp~lst~~Hrrs  371 (498)
T KOG4328|consen  310 TDGSEYENLRLHKKKITSVALNPVCPWFLATAS-----LDQTAKIW--DLRQLRGKASPFLSTLPHRRS  371 (498)
T ss_pred             cCCccchhhhhhhcccceeecCCCCchheeecc-----cCcceeee--ehhhhcCCCCcceecccccce
Confidence            8655 5556666666665         889999     99999999  994433322223334455543

>KOG2919|consensus

Probab=99.61  E-value=8.6e-15  Score=121.17  Aligned_cols=161  Identities=20%  Similarity=0.269  Sum_probs=125.1

Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEeC-CCCeEEEE---E----eCCCCCeEEEEEec-CCCEEEEEECCCcEEEEeccc
Q psy8430         164 VWDVAVRPGQPVLGSASADRTVRLWST-QTGKCVLQ---Y----SGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVI  234 (361)
Q Consensus       164 V~~l~~~~~~~~l~s~s~d~~i~~wd~-~~~~~~~~---~----~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~lwd~~~  234 (361)
                      -.+++|+|||..|++| ..+.|++||+ +.|+....   +    .+..+-+.|++|+| +...++.++...++-|+.-..
T Consensus       161 AhsL~Fs~DGeqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~  239 (406)
T KOG2919|consen  161 AHSLQFSPDGEQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDG  239 (406)
T ss_pred             heeEEecCCCCeEeec-ccceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCC
Confidence            4589999999999876 5579999999 55532111   1    13467889999999 455899999998888886432


Q ss_pred             cccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEeeCCC-CeEEEEeecC
Q psy8430         235 NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-DRVANLFDVET-GTILQSLTGH  312 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd~~~-~~~~~~~~~h  312 (361)
                                                +.|...+.+|.+.|+.+.|.++|+.|++|.. |-.|-.||++. +.++-.+..|
T Consensus       240 --------------------------~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rh  293 (406)
T KOG2919|consen  240 --------------------------RRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERH  293 (406)
T ss_pred             --------------------------CCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhh
Confidence                                      3578888899999999999999999999876 67799999984 4566667666


Q ss_pred             CC-CCeE----------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         313 DE-EPHI----------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       313 ~~-~v~~----------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      .+ ....          ++++|+     .||.|++|  |+   ..++..+.++..|+++|
T Consensus       294 v~~TNQRI~FDld~~~~~LasG~-----tdG~V~vw--dl---k~~gn~~sv~~~~sd~v  343 (406)
T KOG2919|consen  294 VGDTNQRILFDLDPKGEILASGD-----TDGSVRVW--DL---KDLGNEVSVTGNYSDTV  343 (406)
T ss_pred             ccCccceEEEecCCCCceeeccC-----CCccEEEE--ec---CCCCCcccccccccccc
Confidence            55 2222          889999     99999999  88   66666788888887754

>KOG1273|consensus

Probab=99.61  E-value=1.6e-14  Score=119.14  Aligned_cols=203  Identities=15%  Similarity=0.108  Sum_probs=120.8

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC-EEEEEECCCcEE
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVH  228 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~  228 (361)
                      +...-+.|.+|..+|++++|+++|++|+++|.|..|.+||+..|.++..+. ..++|+.+.|+|... .++..-.+..-.
T Consensus        54 T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~  132 (405)
T KOG1273|consen   54 TFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPV  132 (405)
T ss_pred             ccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE-ccCccceeeeccccCCeEEEEEecCCcE
Confidence            334667788999999999999999999999999999999999998888877 677888888888433 333333333222


Q ss_pred             EEecc--ccccccCCCC-CCCCCCC---CCCCCCceec--------------ccccEEEeCCC-CcEEEEEEcCCCCEEE
Q psy8430         229 IWQAV--INWECLNNDN-DSDLDES---KEPDESSITL--------------RTPVKELLGHS-NVVIAADWLSDGEQVI  287 (361)
Q Consensus       229 lwd~~--~~~~~~~~~~-~~~~~~~---~~~~~~~~~~--------------~~~~~~~~~~~-~~v~~~~~~~~~~~l~  287 (361)
                      +-++.  ....++.... .......   ....+.....              ..++..++-.. ..|.++.++..|++|+
T Consensus       133 vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~li  212 (405)
T KOG1273|consen  133 VIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLI  212 (405)
T ss_pred             EEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCcEEE
Confidence            22222  1111111100 0000000   0000111111              12233333233 5778889999999999


Q ss_pred             EEeCCCcEEEeeCCCC-------eE--EEEeec--CCCCCeEEEEEcCCCcc----cCCCeEEEEcCCCCCCCCcceeee
Q psy8430         288 TASWDRVANLFDVETG-------TI--LQSLTG--HDEEPHILCVSSYYSKV----SCDLFQRIQHLDCGTSENPIHSVC  352 (361)
Q Consensus       288 s~~~d~~v~iwd~~~~-------~~--~~~~~~--h~~~v~~~~~s~s~~~v----~~dg~i~iW~~d~~~~~~~~~~v~  352 (361)
                      .-+.|+.|+.|+++.-       +.  .+.+..  ..-.-.++++++.+.||    ..-..++||  ...+    +..|.
T Consensus       213 iNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIW--E~~~----GsLVK  286 (405)
T KOG1273|consen  213 INTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIW--EKSI----GSLVK  286 (405)
T ss_pred             EecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccEEEeccccceeEEEE--ecCC----cceee
Confidence            9999999999998621       11  111111  00111125555554433    367889999  6522    56688


Q ss_pred             eeccccc
Q psy8430         353 VFQDIQS  359 (361)
Q Consensus       353 ~~~~h~~  359 (361)
                      .|.|.++
T Consensus       287 ILhG~kg  293 (405)
T KOG1273|consen  287 ILHGTKG  293 (405)
T ss_pred             eecCCch
Confidence            8887764

>KOG1310|consensus

Probab=99.59  E-value=2.7e-15  Score=132.18  Aligned_cols=135  Identities=23%  Similarity=0.297  Sum_probs=112.7

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe-CCCCCeEEEEEec--CCCEEEEEECCCcEE
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLP--NKDLVLSASGDKSVH  228 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~-~h~~~v~~v~~~~--~~~~l~s~~~d~~i~  228 (361)
                      .....|+||++-|+|++|+.+|.+|++||.|-.+.|||....+.++.+. ||...|.+++|-|  +..++++|+.|..|+
T Consensus        41 ~lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~  120 (758)
T KOG1310|consen   41 DLEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIK  120 (758)
T ss_pred             chhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEE
Confidence            4456788999999999999999999999999999999998888887775 8999999999999  456899999999999


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEeeCCC
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG-EQVITASWDRVANLFDVET  302 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~  302 (361)
                      +||+...++-..                ......+...+..|...|..++..|++ ..+.+++.||+++-+|++.
T Consensus       121 lfdl~~~~~~~~----------------d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiRE  179 (758)
T KOG1310|consen  121 LFDLDSSKEGGM----------------DHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIRE  179 (758)
T ss_pred             EEeccccccccc----------------ccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccC
Confidence            999874322100                111223556667799999999999988 7889999999999999985

>KOG0771|consensus

Probab=99.59  E-value=1.7e-14  Score=123.39  Aligned_cols=173  Identities=17%  Similarity=0.184  Sum_probs=128.1

Q ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCC
Q psy8430         165 WDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDND  244 (361)
Q Consensus       165 ~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~  244 (361)
                      -+++|+++|..+++|+.||++|+|++.+-..+.....|...|.++.|+|||+.|++.+.| ..+||+++++..+......
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~  226 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF  226 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence            679999999999999999999999988888888888899999999999999999999999 9999999988544332210


Q ss_pred             CCC---CC--CC--------------CCCCCceecc-----c----ccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy8430         245 SDL---DE--SK--------------EPDESSITLR-----T----PVKELLGHSNVVIAADWLSDGEQVITASWDRVAN  296 (361)
Q Consensus       245 ~~~---~~--~~--------------~~~~~~~~~~-----~----~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~  296 (361)
                      ...   ..  ..              .+........     .    +..........|++++++++|++++.|+.||.|-
T Consensus       227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVa  306 (398)
T KOG0771|consen  227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVA  306 (398)
T ss_pred             ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEE
Confidence            000   00  00              0000000000     0    0011111234799999999999999999999999


Q ss_pred             EeeCCCCeEEEEee-cCCCCCeEEEEEcC---CCcccCCCeEEEEc
Q psy8430         297 LFDVETGTILQSLT-GHDEEPHILCVSSY---YSKVSCDLFQRIQH  338 (361)
Q Consensus       297 iwd~~~~~~~~~~~-~h~~~v~~~~~s~s---~~~v~~dg~i~iW~  338 (361)
                      |++..+.++++-.+ .|...|+.+-++++   ...++.|....|-.
T Consensus       307 i~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~  352 (398)
T KOG0771|consen  307 IYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTK  352 (398)
T ss_pred             EEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEE
Confidence            99999988887664 69999999888887   22456777777763

>KOG0307|consensus

Probab=99.59  E-value=1.4e-15  Score=144.48  Aligned_cols=188  Identities=17%  Similarity=0.230  Sum_probs=140.5

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEE--eCCCCCeEEEEEecC-CCEEEEEECC
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQY--SGHSGSVNSVRFLPN-KDLVLSASGD  224 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~--~~h~~~v~~v~~~~~-~~~l~s~~~d  224 (361)
                      .....+.+...|.+.|..++|++.+. +||+|+.||.|.|||+..-+.-..+  ....+.|.+++|+.. .+.|++++.+
T Consensus       104 ~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~s  183 (1049)
T KOG0307|consen  104 ASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPS  183 (1049)
T ss_pred             cchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCC
Confidence            34467788889999999999999655 9999999999999999865433332  224678999999874 4578899999


Q ss_pred             CcEEEEeccccccccCCCCCCCCC----CCCCCC-------------CCceec------ccccEEEeCCCCcEEEEEEcC
Q psy8430         225 KSVHIWQAVINWECLNNDNDSDLD----ESKEPD-------------ESSITL------RTPVKELLGHSNVVIAADWLS  281 (361)
Q Consensus       225 ~~i~lwd~~~~~~~~~~~~~~~~~----~~~~~~-------------~~~~~~------~~~~~~~~~~~~~v~~~~~~~  281 (361)
                      |++.|||++..+.+..........    ...+++             ......      ..+.+.+.+|...|.++.|++
T Consensus       184 g~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~  263 (1049)
T KOG0307|consen  184 GRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCP  263 (1049)
T ss_pred             CCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCC
Confidence            999999999887665543322210    001111             011111      237778889999999999999


Q ss_pred             CC-CEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE---------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         282 DG-EQVITASWDRVANLFDVETGTILQSLTGHDEEPHI---------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       282 ~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~---------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      .+ .++++++.|+.|.+|+.++|+.+..+....+-+..         +++.++     -||.|.|+++-.
T Consensus       264 ~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~as-----fdgkI~I~sl~~  328 (1049)
T KOG0307|consen  264 QDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAAS-----FDGKISIYSLQG  328 (1049)
T ss_pred             CCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhhe-----eccceeeeeeec
Confidence            66 89999999999999999999999999875555555         455555     899999994433

>KOG1007|consensus

Probab=99.59  E-value=1.6e-14  Score=117.81  Aligned_cols=155  Identities=19%  Similarity=0.199  Sum_probs=123.2

Q ss_pred             eeeeEEee-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE-EEEEe-----CCCCCeEEEEEec--CCCEEEEE
Q psy8430         151 CYKIRSFS-GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC-VLQYS-----GHSGSVNSVRFLP--NKDLVLSA  221 (361)
Q Consensus       151 ~~~~~~l~-~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~-~~~~~-----~h~~~v~~v~~~~--~~~~l~s~  221 (361)
                      .+++..|. .+-+.|.|+.|.|++..+++-. |..|.+|++..+.. +..+.     .+.....+-+|+|  +++.+++.
T Consensus       112 lE~v~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt  190 (370)
T KOG1007|consen  112 LECVASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT  190 (370)
T ss_pred             hhHhhcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe
Confidence            45666665 6778999999999999888765 88999999987754 33332     3566778889999  67777664


Q ss_pred             ECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEeeC
Q psy8430         222 SGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITASWDRVANLFDV  300 (361)
Q Consensus       222 ~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~  300 (361)
                       .|+++..||+++..+                         ....-..|...|..+.|+|+.. +|++|+.||.|+|||.
T Consensus       191 -~d~tl~~~D~RT~~~-------------------------~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~  244 (370)
T KOG1007|consen  191 -SDSTLQFWDLRTMKK-------------------------NNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDT  244 (370)
T ss_pred             -CCCcEEEEEccchhh-------------------------hcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEec
Confidence             589999999986643                         1222346888999999999765 5788999999999999


Q ss_pred             CC-CeEEEEeecCCCCCeE---------EEEEcCCCcccCCCeEEEE
Q psy8430         301 ET-GTILQSLTGHDEEPHI---------LCVSSYYSKVSCDLFQRIQ  337 (361)
Q Consensus       301 ~~-~~~~~~~~~h~~~v~~---------~~~s~s~~~v~~dg~i~iW  337 (361)
                      ++ ..+++.+.+|+.-|.+         ++.|++     .|..|-+|
T Consensus       245 R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~-----SDs~V~Ls  286 (370)
T KOG1007|consen  245 RKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGG-----SDSAVNLS  286 (370)
T ss_pred             cCCCccccccCCCceEEEEEEecCccceEEEecC-----CCceeEEE
Confidence            84 5678999999998887         788888     99999999

>KOG1274|consensus

Probab=99.59  E-value=4e-14  Score=131.75  Aligned_cols=128  Identities=18%  Similarity=0.268  Sum_probs=106.3

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeC--------CCCCeEEEEEecCCCEEEE
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG--------HSGSVNSVRFLPNKDLVLS  220 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~--------h~~~v~~v~~~~~~~~l~s  220 (361)
                      .+...+.++.+|.++|.++.|+|.+++||+.+.||+|++||+.++....++.+        ....+..++|+|++..|+.
T Consensus       126 ~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~  205 (933)
T KOG1274|consen  126 DDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAV  205 (933)
T ss_pred             cccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEe
Confidence            34456678889999999999999999999999999999999999877666542        1456788999999999999


Q ss_pred             EECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe--CCCCcEEEEEEcCCCCEEEEEeCCCcEEEe
Q psy8430         221 ASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASWDRVANLF  298 (361)
Q Consensus       221 ~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~d~~v~iw  298 (361)
                      .+.|+.|++|+....                          .....+.  -+...+..++|+|+|+||++++.||.|.||
T Consensus       206 ~~~d~~Vkvy~r~~w--------------------------e~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vW  259 (933)
T KOG1274|consen  206 PPVDNTVKVYSRKGW--------------------------ELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVW  259 (933)
T ss_pred             eccCCeEEEEccCCc--------------------------eeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEE
Confidence            999999999986543                          1233332  244558999999999999999999999999


Q ss_pred             eCCC
Q psy8430         299 DVET  302 (361)
Q Consensus       299 d~~~  302 (361)
                      |+++
T Consensus       260 nv~t  263 (933)
T KOG1274|consen  260 NVDT  263 (933)
T ss_pred             eccc
Confidence            9995

>KOG2048|consensus

Probab=99.58  E-value=1.2e-13  Score=124.66  Aligned_cols=172  Identities=17%  Similarity=0.241  Sum_probs=131.8

Q ss_pred             cCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE--EEeCCCCCeEEEEEecCCCEEEEEEC
Q psy8430         146 TSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL--QYSGHSGSVNSVRFLPNKDLVLSASG  223 (361)
Q Consensus       146 ~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~--~~~~h~~~v~~v~~~~~~~~l~s~~~  223 (361)
                      ++..+++....+....++||+++.+|.+..++.|+.||.+..++...++...  .+....+.|.++.|+|++..+++|+.
T Consensus        95 wDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~  174 (691)
T KOG2048|consen   95 WDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSI  174 (691)
T ss_pred             EecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEeccc
Confidence            3446677788888889999999999999999999999988888877765432  34445689999999999999999999


Q ss_pred             CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe-CCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC
Q psy8430         224 DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITASWDRVANLFDVET  302 (361)
Q Consensus       224 d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~  302 (361)
                      ||.|++||+.++..+.-                   ....+..+. +...-|+++.|-.+ ..+++|...|+|.+||...
T Consensus       175 Dg~Iriwd~~~~~t~~~-------------------~~~~~d~l~k~~~~iVWSv~~Lrd-~tI~sgDS~G~V~FWd~~~  234 (691)
T KOG2048|consen  175 DGVIRIWDVKSGQTLHI-------------------ITMQLDRLSKREPTIVWSVLFLRD-STIASGDSAGTVTFWDSIF  234 (691)
T ss_pred             CceEEEEEcCCCceEEE-------------------eeecccccccCCceEEEEEEEeec-CcEEEecCCceEEEEcccC
Confidence            99999999987744310                   000111111 13346888988854 4799999999999999999


Q ss_pred             CeEEEEeecCCCCCeEEEEEcCCCcc---cCCCeEEEE
Q psy8430         303 GTILQSLTGHDEEPHILCVSSYYSKV---SCDLFQRIQ  337 (361)
Q Consensus       303 ~~~~~~~~~h~~~v~~~~~s~s~~~v---~~dg~i~iW  337 (361)
                      |..++.+..|..-|.++.++.....|   +.|+.|--+
T Consensus       235 gTLiqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~  272 (691)
T KOG2048|consen  235 GTLIQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQY  272 (691)
T ss_pred             cchhhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEE
Confidence            99999999999999985444432211   378888777

>KOG0644|consensus

Probab=99.58  E-value=6.4e-16  Score=142.04  Aligned_cols=121  Identities=27%  Similarity=0.509  Sum_probs=102.8

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEE
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  230 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lw  230 (361)
                      -+.++.|.||..+|+|+.|+..|.++++|+.|..++||..+++.++..+.||.+.|+.++.+....++++++.|..|++|
T Consensus       180 mk~ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvW  259 (1113)
T KOG0644|consen  180 MKNIKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVW  259 (1113)
T ss_pred             HHHHHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEE
Confidence            35677888999999999999999999999999999999999999999999999999999999888899999999999999


Q ss_pred             eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCC
Q psy8430         231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  301 (361)
Q Consensus       231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~  301 (361)
                      .+..+.                          ++..+.+|.+.|++++|+|-.    +.+.||++++||.+
T Consensus       260 rl~~~~--------------------------pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r  300 (1113)
T KOG0644|consen  260 RLPDGA--------------------------PVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDAR  300 (1113)
T ss_pred             ecCCCc--------------------------hHHHHhccccceeeeccCccc----cCCCCCceEecccc
Confidence            887663                          566666777777777776643    55566666666655

>KOG2394|consensus

Probab=99.58  E-value=4e-14  Score=124.55  Aligned_cols=135  Identities=18%  Similarity=0.287  Sum_probs=108.0

Q ss_pred             CCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCC--------------C--------------eEEEEEeCCCCCeEEEEE
Q psy8430         161 RDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQT--------------G--------------KCVLQYSGHSGSVNSVRF  211 (361)
Q Consensus       161 ~~~V~~l~~~~~~-~~l~s~s~d~~i~~wd~~~--------------~--------------~~~~~~~~h~~~v~~v~~  211 (361)
                      +..|+|+.|-|.+ ..++.+-.+|.+.++|...              +              .++..|.--.+.|+..+|
T Consensus       219 ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~F  298 (636)
T KOG2394|consen  219 KSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAF  298 (636)
T ss_pred             ccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeE
Confidence            4789999999944 4777888899999997631              0              122223333468899999


Q ss_pred             ecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC
Q psy8430         212 LPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW  291 (361)
Q Consensus       212 ~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~  291 (361)
                      +|||++||+.+.||.++|||..+..                          ....++...+...+++|+|||+||++|+.
T Consensus       299 S~DG~~LA~VSqDGfLRvF~fdt~e--------------------------Llg~mkSYFGGLLCvcWSPDGKyIvtGGE  352 (636)
T KOG2394|consen  299 SPDGKYLATVSQDGFLRIFDFDTQE--------------------------LLGVMKSYFGGLLCVCWSPDGKYIVTGGE  352 (636)
T ss_pred             cCCCceEEEEecCceEEEeeccHHH--------------------------HHHHHHhhccceEEEEEcCCccEEEecCC
Confidence            9999999999999999999976542                          33444556778999999999999999999


Q ss_pred             CCcEEEeeCCCCeEEEEeecCCCCCeEEEE
Q psy8430         292 DRVANLFDVETGTILQSLTGHDEEPHILCV  321 (361)
Q Consensus       292 d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~  321 (361)
                      |..|.||.+..++.+..=.+|..-|..++|
T Consensus       353 DDLVtVwSf~erRVVARGqGHkSWVs~VaF  382 (636)
T KOG2394|consen  353 DDLVTVWSFEERRVVARGQGHKSWVSVVAF  382 (636)
T ss_pred             cceEEEEEeccceEEEeccccccceeeEee
Confidence            999999999999999998889888877443

>KOG1445|consensus

Probab=99.57  E-value=1.9e-14  Score=128.98  Aligned_cols=175  Identities=24%  Similarity=0.333  Sum_probs=135.5

Q ss_pred             cceeeeEEeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCe--E----EEEEeCCCCCeEEEEEecCCCEEEEE
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGK--C----VLQYSGHSGSVNSVRFLPNKDLVLSA  221 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~--~----~~~~~~h~~~v~~v~~~~~~~~l~s~  221 (361)
                      .+.+.+..|.+|...|+++.|+| +..+|++||.|..|+||.+..|-  .    -..+.+..-.|.++.|+|...-++..
T Consensus        67 r~~r~i~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~s  146 (1012)
T KOG1445|consen   67 RRTRDIGILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILAS  146 (1012)
T ss_pred             ccccccceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEEe
Confidence            33456777889999999999999 55599999999999999997542  1    12233445678899999977777777


Q ss_pred             ECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCC
Q psy8430         222 SGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  301 (361)
Q Consensus       222 ~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~  301 (361)
                      +..|.+.|||+.++                          +....+.+|...|.++.|+.||..+++++.|..|+|||.+
T Consensus       147 ~a~g~v~i~D~stq--------------------------k~~~el~~h~d~vQSa~WseDG~llatscKdkqirifDPR  200 (1012)
T KOG1445|consen  147 GAHGSVYITDISTQ--------------------------KTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPR  200 (1012)
T ss_pred             ccCceEEEEEcccC--------------------------ceeecccCCchhhhccccccCCceEeeecCCcceEEeCCc
Confidence            77899999999876                          3677889999999999999999999999999999999998


Q ss_pred             -CCeEEEEeecCCCCCeE-EEEEcCC---Cc----ccCCCeEEEEcCCCCCCCCcceeeeee
Q psy8430         302 -TGTILQSLTGHDEEPHI-LCVSSYY---SK----VSCDLFQRIQHLDCGTSENPIHSVCVF  354 (361)
Q Consensus       302 -~~~~~~~~~~h~~~v~~-~~~s~s~---~~----v~~dg~i~iW~~d~~~~~~~~~~v~~~  354 (361)
                       .++.+++..+|.+.-.+ +++.|.-   ++    --.-..|++|  |+   |+-..+++++
T Consensus       201 a~~~piQ~te~H~~~rdsRv~w~Gn~~rlisTGF~~~R~reV~~~--Dt---r~f~~p~~tl  257 (1012)
T KOG1445|consen  201 ASMEPIQTTEGHGGMRDSRVLWAGNWERLISTGFTTKRIREVRAY--DT---RKFGAPVHTL  257 (1012)
T ss_pred             cCCCccccccccccchhheeeeccchhhhhhcccchhhheeeeee--ec---cccCCcceeE
Confidence             57889988999876444 5555541   11    1234578999  99   5433444444

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.56  E-value=1.9e-12  Score=113.74  Aligned_cols=157  Identities=18%  Similarity=0.178  Sum_probs=112.8

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEE-ECCCcE
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA-SGDKSV  227 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~~~l-~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~-~~d~~i  227 (361)
                      +++.+..+.+|.. +.+++|+|++..+ ++++.++.|++||..+++.+..+..+. .+..++|+|+++.++++ +.|+.+
T Consensus        20 t~~~~~~~~~~~~-~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~~~~~~~~~l   97 (300)
T TIGR03866        20 TLEVTRTFPVGQR-PRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGP-DPELFALHPNGKILYIANEDDNLV   97 (300)
T ss_pred             CCceEEEEECCCC-CCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCC-CccEEEECCCCCEEEEEcCCCCeE
Confidence            3456667776644 6789999999876 567789999999999988877776443 35788999999877554 568999


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC-cEEEeeCCCCeEE
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR-VANLFDVETGTIL  306 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-~v~iwd~~~~~~~  306 (361)
                      ++||+.+..                          .+..+. +...+.+++|+|+|.++++++.++ .+.+||..+++..
T Consensus        98 ~~~d~~~~~--------------------------~~~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~  150 (300)
T TIGR03866        98 TVIDIETRK--------------------------VLAEIP-VGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIV  150 (300)
T ss_pred             EEEECCCCe--------------------------EEeEee-CCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEE
Confidence            999987542                          223332 223467899999999999988875 4678899988876


Q ss_pred             EEeecCCCCCeE---------EEEEcCCCcccCCCeEEEEcCCCCC
Q psy8430         307 QSLTGHDEEPHI---------LCVSSYYSKVSCDLFQRIQHLDCGT  343 (361)
Q Consensus       307 ~~~~~h~~~v~~---------~~~s~s~~~v~~dg~i~iW~~d~~~  343 (361)
                      ..+..... ...         +++++.     .++.|++|  |+.+
T Consensus       151 ~~~~~~~~-~~~~~~s~dg~~l~~~~~-----~~~~v~i~--d~~~  188 (300)
T TIGR03866       151 DNVLVDQR-PRFAEFTADGKELWVSSE-----IGGTVSVI--DVAT  188 (300)
T ss_pred             EEEEcCCC-ccEEEECCCCCEEEEEcC-----CCCEEEEE--EcCc
Confidence            65543222 222         334444     79999999  7744

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG1523|consensus

Probab=99.56  E-value=6.2e-14  Score=116.01  Aligned_cols=174  Identities=16%  Similarity=0.161  Sum_probs=136.4

Q ss_pred             eecCccc-eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC-C--eEEEEEeCCCCCeEEEEEecCCCEEE
Q psy8430         144 FKTSLLS-CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-G--KCVLQYSGHSGSVNSVRFLPNKDLVL  219 (361)
Q Consensus       144 ~~~~~~~-~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~-~--~~~~~~~~h~~~v~~v~~~~~~~~l~  219 (361)
                      +.....+ .+..++++.|...|++++|+|..+.|++|+.|..-++|.... +  ++...+..+...+++|.|+|..+.|+
T Consensus        37 y~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFA  116 (361)
T KOG1523|consen   37 YSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFA  116 (361)
T ss_pred             EEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEE
Confidence            4444445 788999999999999999999999999999999999999843 3  56666667999999999999999999


Q ss_pred             EEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEee
Q psy8430         220 SASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD  299 (361)
Q Consensus       220 s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd  299 (361)
                      +|+..+.|.||=....+                      ..+-..+.-..+.+.|.++.|+|++-++++|+.|+..++|.
T Consensus       117 VgSgar~isVcy~E~EN----------------------dWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfS  174 (361)
T KOG1523|consen  117 VGSGARLISVCYYEQEN----------------------DWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFS  174 (361)
T ss_pred             eccCccEEEEEEEeccc----------------------ceehhhhhCCccccceeeeeccCCcceecccccCcceeEEE
Confidence            99999999998654321                      11112223344678899999999999999999999999986


Q ss_pred             CC-----C-------------CeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCC
Q psy8430         300 VE-----T-------------GTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDC  341 (361)
Q Consensus       300 ~~-----~-------------~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~  341 (361)
                      ..     .             |+.+..+....+.+..+.+++++.   +|++|+.+.+=  |.
T Consensus       175 ayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~--da  235 (361)
T KOG1523|consen  175 AYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFV--DA  235 (361)
T ss_pred             EeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEe--ec
Confidence            42     1             233444444556677788887744   67899999998  76

>KOG0321|consensus

Probab=99.56  E-value=7e-14  Score=125.33  Aligned_cols=84  Identities=20%  Similarity=0.369  Sum_probs=63.1

Q ss_pred             eEEeeccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCe---------------------------EEEEEeCCCCC
Q psy8430         154 IRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGK---------------------------CVLQYSGHSGS  205 (361)
Q Consensus       154 ~~~l~~h~~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~~~---------------------------~~~~~~~h~~~  205 (361)
                      .+.+.||.+.|-+++|.|+ ...|++|+.||.|.|||++...                           .+.....+...
T Consensus       137 ~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~t  216 (720)
T KOG0321|consen  137 GRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNT  216 (720)
T ss_pred             ceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCc
Confidence            3348899999999999994 5589999999999999986221                           11223344455


Q ss_pred             eEE---EEEecCCCEEEEEEC-CCcEEEEecccccc
Q psy8430         206 VNS---VRFLPNKDLVLSASG-DKSVHIWQAVINWE  237 (361)
Q Consensus       206 v~~---v~~~~~~~~l~s~~~-d~~i~lwd~~~~~~  237 (361)
                      |.+   +.+..|...|++++. |+.|+|||+++...
T Consensus       217 i~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~  252 (720)
T KOG0321|consen  217 IFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYT  252 (720)
T ss_pred             eeeeeEEEEEeccceeeeccCCCcceEEEeeccccc
Confidence            554   555668888888887 99999999997744

>KOG2055|consensus

Probab=99.55  E-value=5e-13  Score=115.65  Aligned_cols=171  Identities=13%  Similarity=0.161  Sum_probs=123.9

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--eEEEEEeCCCCCeEEEEEecCCC-EEEEEECCCcEEEEecccccc
Q psy8430         161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAVINWE  237 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~--~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~lwd~~~~~~  237 (361)
                      .+.|+++.|+|...++++|+.|++++||.++..  ..+..+.-...+|.+.+|.|+|. .+++++.-..+..||+.+.+.
T Consensus       213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~  292 (514)
T KOG2055|consen  213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKV  292 (514)
T ss_pred             cCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccccc
Confidence            478999999999999999999999999998633  34555555678999999999999 899999999999999987754


Q ss_pred             ccCCCC-CCCCCCCCCCCCCceecccccEEEeC--------------------CCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy8430         238 CLNNDN-DSDLDESKEPDESSITLRTPVKELLG--------------------HSNVVIAADWLSDGEQVITASWDRVAN  296 (361)
Q Consensus       238 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~v~~~~~~~~~~~l~s~~~d~~v~  296 (361)
                      .+-... ..+......+.+..   ......+.|                    -.+.|..++|+.+|+.|++++.+|.|.
T Consensus       293 ~k~~~~~g~e~~~~e~FeVSh---d~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~GeV~  369 (514)
T KOG2055|consen  293 TKLKPPYGVEEKSMERFEVSH---DSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTGEVY  369 (514)
T ss_pred             ccccCCCCcccchhheeEecC---CCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCceEE
Confidence            332111 00000100000000   000111111                    245688899999999999999999999


Q ss_pred             EeeCCCCeEEEEeecCCCCCeE----------EEEEcCCCcccCCCeEEEEcCCCC
Q psy8430         297 LFDVETGTILQSLTGHDEEPHI----------LCVSSYYSKVSCDLFQRIQHLDCG  342 (361)
Q Consensus       297 iwd~~~~~~~~~~~~h~~~v~~----------~~~s~s~~~v~~dg~i~iW~~d~~  342 (361)
                      +||+++..|++++.... .|..          ++|+|+     ..|.|.||  |..
T Consensus       370 v~nl~~~~~~~rf~D~G-~v~gts~~~S~ng~ylA~GS-----~~GiVNIY--d~~  417 (514)
T KOG2055|consen  370 VWNLRQNSCLHRFVDDG-SVHGTSLCISLNGSYLATGS-----DSGIVNIY--DGN  417 (514)
T ss_pred             EEecCCcceEEEEeecC-ccceeeeeecCCCceEEecc-----CcceEEEe--ccc
Confidence            99999999999987422 2221          788888     99999999  643

>KOG0290|consensus

Probab=99.55  E-value=1.1e-13  Score=113.18  Aligned_cols=179  Identities=19%  Similarity=0.197  Sum_probs=130.6

Q ss_pred             eeeccceeEEeeecCc--cceeeeEEe-----eccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCe---EEEEEeC
Q psy8430         133 LKVQTSKIVSSFKTSL--LSCYKIRSF-----SGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGK---CVLQYSG  201 (361)
Q Consensus       133 ~~~~~~~~~~~~~~~~--~~~~~~~~l-----~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~---~~~~~~~  201 (361)
                      +-+.++..++.|..+.  ....+...|     ..+.+++++..|+. +-++|.++|-|.+..|||+++|.   ...++..
T Consensus       115 lLATs~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIA  194 (364)
T KOG0290|consen  115 LLATSSDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIA  194 (364)
T ss_pred             hhhcccCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEe
Confidence            3344455555565552  222222222     24678999999998 77799999999999999999873   3556778


Q ss_pred             CCCCeEEEEEecCC-CEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEc
Q psy8430         202 HSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL  280 (361)
Q Consensus       202 h~~~v~~v~~~~~~-~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  280 (361)
                      |+..|..|+|...+ +.|++++.||.+++||++...-                       .+.+..-.....+...++|+
T Consensus       195 HDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leH-----------------------STIIYE~p~~~~pLlRLswn  251 (364)
T KOG0290|consen  195 HDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEH-----------------------STIIYEDPSPSTPLLRLSWN  251 (364)
T ss_pred             cCcceeEEEeccCccceEEEecCCCcEEEEEeccccc-----------------------ceEEecCCCCCCcceeeccC
Confidence            99999999999854 5799999999999999985421                       11111212225677888998


Q ss_pred             C-CCCEEEEEeCC-CcEEEeeCCC-CeEEEEeecCCCCCeE---------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         281 S-DGEQVITASWD-RVANLFDVET-GTILQSLTGHDEEPHI---------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       281 ~-~~~~l~s~~~d-~~v~iwd~~~-~~~~~~~~~h~~~v~~---------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      + +-+++++-..| ..|.|.|++. ..++.++.+|.+.|..         .++|++     .|..+-||  |+
T Consensus       252 kqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaG-----DD~qaliW--Dl  317 (364)
T KOG0290|consen  252 KQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAG-----DDCQALIW--DL  317 (364)
T ss_pred             cCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecC-----CcceEEEE--ec
Confidence            8 45677776655 4489999995 5678899999999988         566677     99999999  66

>KOG0649|consensus

Probab=99.54  E-value=3.9e-13  Score=107.34  Aligned_cols=131  Identities=18%  Similarity=0.199  Sum_probs=103.4

Q ss_pred             eeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe------EEEE--EeC-----CCCCeEEEEEecCCCEEE
Q psy8430         153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK------CVLQ--YSG-----HSGSVNSVRFLPNKDLVL  219 (361)
Q Consensus       153 ~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~------~~~~--~~~-----h~~~v~~v~~~~~~~~l~  219 (361)
                      .+-..++|.++|+.++|..+  +|++|+ ||.|+-|..+...      .+..  ...     ....|+++-..|..+.++
T Consensus        54 ~iv~eqahdgpiy~~~f~d~--~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~  130 (325)
T KOG0649|consen   54 KIVPEQAHDGPIYYLAFHDD--FLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSIL  130 (325)
T ss_pred             ceeeccccCCCeeeeeeehh--heeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEE
Confidence            34456899999999999843  676665 4999999875321      1111  111     234688999999888888


Q ss_pred             EEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEee
Q psy8430         220 SASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD  299 (361)
Q Consensus       220 s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd  299 (361)
                      .++.|+.+..||+.++                          +....++||+..+.++.--.....+++|+.||++++||
T Consensus       131 ~AgGD~~~y~~dlE~G--------------------------~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd  184 (325)
T KOG0649|consen  131 FAGGDGVIYQVDLEDG--------------------------RIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWD  184 (325)
T ss_pred             EecCCeEEEEEEecCC--------------------------EEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEe
Confidence            8889999999999877                          46788999999999998755667899999999999999


Q ss_pred             CCCCeEEEEeecC
Q psy8430         300 VETGTILQSLTGH  312 (361)
Q Consensus       300 ~~~~~~~~~~~~h  312 (361)
                      .++++++..+...
T Consensus       185 ~kt~k~v~~ie~y  197 (325)
T KOG0649|consen  185 TKTQKHVSMIEPY  197 (325)
T ss_pred             ccccceeEEeccc
Confidence            9999999888643

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.54  E-value=1.2e-12  Score=106.79  Aligned_cols=118  Identities=18%  Similarity=0.353  Sum_probs=91.5

Q ss_pred             cCCCeEEEEEcCCCCEEEEE--eCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECC---CcEEEEeccc
Q psy8430         160 HRDGVWDVAVRPGQPVLGSA--SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD---KSVHIWQAVI  234 (361)
Q Consensus       160 h~~~V~~l~~~~~~~~l~s~--s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d---~~i~lwd~~~  234 (361)
                      ..++|.+++|+|+|+.|+..  ..++.|.+||++ ++.+..+.  ...++.|.|+|+|++++.++.+   |.+.+||+++
T Consensus        58 ~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~  134 (194)
T PF08662_consen   58 KEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRK  134 (194)
T ss_pred             CCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCC
Confidence            44679999999999976554  467899999996 66676664  5678899999999999998754   6799999875


Q ss_pred             cccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC------CCcEEEeeCCCCeEEEE
Q psy8430         235 NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW------DRVANLFDVETGTILQS  308 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~------d~~v~iwd~~~~~~~~~  308 (361)
                      ..                          .+...  ....++.++|+|+|+++++++.      |+.++||+.. |+.+..
T Consensus       135 ~~--------------------------~i~~~--~~~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~~l~~  185 (194)
T PF08662_consen  135 KK--------------------------KISTF--EHSDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GRLLYK  185 (194)
T ss_pred             CE--------------------------Eeecc--ccCcEEEEEEcCCCCEEEEEEeccceeccccEEEEEec-CeEeEe
Confidence            42                          22222  2335789999999999999874      7889999985 776655


Q ss_pred             e
Q psy8430         309 L  309 (361)
Q Consensus       309 ~  309 (361)
                      .
T Consensus       186 ~  186 (194)
T PF08662_consen  186 K  186 (194)
T ss_pred             c
Confidence            4

>KOG2096|consensus

Probab=99.51  E-value=3.5e-13  Score=111.55  Aligned_cols=124  Identities=19%  Similarity=0.328  Sum_probs=105.9

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccc
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC  238 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~  238 (361)
                      -|+-.|..+-...++.+|++++.|..|.+|++. |+.+..+......-+..+.+|+|+.+++++.--.+++|.+-.++.-
T Consensus       185 kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG  263 (420)
T KOG2096|consen  185 KHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDG  263 (420)
T ss_pred             hcccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCc
Confidence            467778888888889999999999999999998 8888888877777888899999999999999999999987543210


Q ss_pred             cCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCC
Q psy8430         239 LNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  301 (361)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~  301 (361)
                                        .......+..+.||.+.|.+++|+++...+++.+.||+++|||..
T Consensus       264 ------------------~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtd  308 (420)
T KOG2096|consen  264 ------------------TFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTD  308 (420)
T ss_pred             ------------------chhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeecc
Confidence                              122223567889999999999999999999999999999999975

>KOG4227|consensus

Probab=99.51  E-value=1.2e-13  Score=117.33  Aligned_cols=169  Identities=14%  Similarity=0.087  Sum_probs=126.8

Q ss_pred             eeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC------CCeEEEEEe-CCCCCeEEEEEecCCCEEEEEECCC
Q psy8430         153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ------TGKCVLQYS-GHSGSVNSVRFLPNKDLVLSASGDK  225 (361)
Q Consensus       153 ~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~------~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d~  225 (361)
                      +.+.+.+|.+-|+++.|+.++.+|++|+.|..+++|++.      +.+++.... .|.+.|.|++|....+.+.+|..++
T Consensus        48 ~qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~  127 (609)
T KOG4227|consen   48 CQKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWG  127 (609)
T ss_pred             hhhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcc
Confidence            344567999999999999999999999999999999985      335665544 3558999999999889999999999


Q ss_pred             cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCe-
Q psy8430         226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT-  304 (361)
Q Consensus       226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~-  304 (361)
                      +|.+.|+.+...+                        -+.......+.|+.+..+|..+.+++.+.++.|-+||.+... 
T Consensus       128 ~VI~HDiEt~qsi------------------------~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~  183 (609)
T KOG4227|consen  128 TVIKHDIETKQSI------------------------YVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQN  183 (609)
T ss_pred             eeEeeecccceee------------------------eeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCC
Confidence            9999999765211                        112222334599999999999999999999999999998654 


Q ss_pred             EEEE-eecCCC----------CCeEEEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeec
Q psy8430         305 ILQS-LTGHDE----------EPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQ  355 (361)
Q Consensus       305 ~~~~-~~~h~~----------~v~~~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~  355 (361)
                      .+.. +.+..+          .-..++++++     .-+-+-+|  |.   |.+..++....
T Consensus       184 ~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~-----~~~G~~~~--D~---R~~~~~~~~~~  235 (609)
T KOG4227|consen  184 PISLVLPANSGKNFYTAEFHPETPALILVNS-----ETGGPNVF--DR---RMQARPVYQRS  235 (609)
T ss_pred             CCceeeecCCCccceeeeecCCCceeEEecc-----ccCCCCce--ee---ccccchHHhhh
Confidence            1111 111111          1122788888     88899999  99   77655554433

>KOG1063|consensus

Probab=99.50  E-value=3.6e-13  Score=121.91  Aligned_cols=137  Identities=22%  Similarity=0.221  Sum_probs=107.2

Q ss_pred             eeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe----EEEEEeCCCCCeEEEEEecCCCEE
Q psy8430         143 SFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK----CVLQYSGHSGSVNSVRFLPNKDLV  218 (361)
Q Consensus       143 ~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~----~~~~~~~h~~~v~~v~~~~~~~~l  218 (361)
                      ++.+.......+..|.+|+-.|+.++|+|||++|++.|.|+++.+|......    .....+.|..-|.+..|+|++.+|
T Consensus       554 I~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~F  633 (764)
T KOG1063|consen  554 IRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYF  633 (764)
T ss_pred             EEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCccccee
Confidence            3444455666777899999999999999999999999999999999985431    123356899999999999999999


Q ss_pred             EEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-----CCCEEEEEeCCC
Q psy8430         219 LSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-----DGEQVITASWDR  293 (361)
Q Consensus       219 ~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~s~~~d~  293 (361)
                      +|+|.|++|++|.......                      ..-+-.....+...|++++|.|     .+..++.|-..|
T Consensus       634 aTaSRDK~VkVW~~~~~~d----------------------~~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~G  691 (764)
T KOG1063|consen  634 ATASRDKKVKVWEEPDLRD----------------------KYISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKG  691 (764)
T ss_pred             EEecCCceEEEEeccCchh----------------------hhhhhhchhccCCceeeEEeeccccccccceEEEEeccc
Confidence            9999999999998754410                      0001113445788999999987     233678888999


Q ss_pred             cEEEeeCC
Q psy8430         294 VANLFDVE  301 (361)
Q Consensus       294 ~v~iwd~~  301 (361)
                      .|.+|...
T Consensus       692 eI~l~~~~  699 (764)
T KOG1063|consen  692 EIVLWRRK  699 (764)
T ss_pred             EEEEEecc
Confidence            99999855

>KOG4378|consensus

Probab=99.50  E-value=1.5e-13  Score=119.98  Aligned_cols=175  Identities=15%  Similarity=0.143  Sum_probs=132.6

Q ss_pred             eeEEeeecCccce--eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC
Q psy8430         139 KIVSSFKTSLLSC--YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD  216 (361)
Q Consensus       139 ~~~~~~~~~~~~~--~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~  216 (361)
                      .++.+|......+  ..++.+.|.  .-.|++......++++||..+.|+|||++...+.+.+.+|...|+++.++-...
T Consensus        57 k~~~~~~K~g~~~~Vp~~~k~~gd--~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~De  134 (673)
T KOG4378|consen   57 KVMRIKEKDGKTPEVPRVRKLTGD--NAFCVACASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDE  134 (673)
T ss_pred             eeEEEecccCCCCccceeeccccc--hHHHHhhhhcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcc
Confidence            3444444433333  233333443  445666555668999999999999999997777788899999999999999999


Q ss_pred             EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC-CCCcEEEEEEcCCCCE-EEEEeCCCc
Q psy8430         217 LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGEQ-VITASWDRV  294 (361)
Q Consensus       217 ~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~-l~s~~~d~~  294 (361)
                      ++++++..|.|.|..+.++..                          ...+.- ....|.-+.|+|..++ |.+++.+|.
T Consensus       135 yiAsvs~gGdiiih~~~t~~~--------------------------tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~  188 (673)
T KOG4378|consen  135 YIASVSDGGDIIIHGTKTKQK--------------------------TTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGA  188 (673)
T ss_pred             eeEEeccCCcEEEEecccCcc--------------------------ccceecCCCCeEEEeecccccceeeEeeccCCe
Confidence            999999999999999876632                          222222 2345668999997765 467899999


Q ss_pred             EEEeeCCCCeEEEEe-ecCCCCCeEEEEEcC----CCcccCCCeEEEEcCCCCC
Q psy8430         295 ANLFDVETGTILQSL-TGHDEEPHILCVSSY----YSKVSCDLFQRIQHLDCGT  343 (361)
Q Consensus       295 v~iwd~~~~~~~~~~-~~h~~~v~~~~~s~s----~~~v~~dg~i~iW~~d~~~  343 (361)
                      |.+||+....++..+ ..|+.+...++++++    +.+|+.|..|.+|  |.+.
T Consensus       189 VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~y--D~~s  240 (673)
T KOG4378|consen  189 VTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIY--DIRS  240 (673)
T ss_pred             EEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEe--eccc
Confidence            999999988777766 469988888999888    3367899999999  8853

>KOG1188|consensus

Probab=99.50  E-value=4.8e-13  Score=111.67  Aligned_cols=176  Identities=18%  Similarity=0.224  Sum_probs=124.7

Q ss_pred             ceeEEeeecCccceeeeEEeeccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCeE--EEEEeCCC-CCeEEEEEe
Q psy8430         138 SKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTGKC--VLQYSGHS-GSVNSVRFL  212 (361)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~--~~~~l~s~s~d~~i~~wd~~~~~~--~~~~~~h~-~~v~~v~~~  212 (361)
                      ...+..+.+++  ++.+..+++|...++.+.|..  ....+.+|+.||+|++||++....  ...+..+. .+-.|++.+
T Consensus        49 ngsv~lyd~~t--g~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~n  126 (376)
T KOG1188|consen   49 NGSVRLYDKGT--GQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLN  126 (376)
T ss_pred             CCeEEEEeccc--hhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeecc
Confidence            34445555544  788899999999999999987  456899999999999999987643  34444554 466777776


Q ss_pred             cCCCEEEEEE----CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccE-EEeCCCCcEEEEEEcC-CCCEE
Q psy8430         213 PNKDLVLSAS----GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVK-ELLGHSNVVIAADWLS-DGEQV  286 (361)
Q Consensus       213 ~~~~~l~s~~----~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~-~~~~l  286 (361)
                      ..++.+++|.    .|-.+.+||++...+                         ++. -...|..-|+++.|+| +.+.|
T Consensus       127 ck~~ii~~GtE~~~s~A~v~lwDvR~~qq-------------------------~l~~~~eSH~DDVT~lrFHP~~pnlL  181 (376)
T KOG1188|consen  127 CKKNIIACGTELTRSDASVVLWDVRSEQQ-------------------------LLRQLNESHNDDVTQLRFHPSDPNLL  181 (376)
T ss_pred             CcCCeEEeccccccCceEEEEEEeccccc-------------------------hhhhhhhhccCcceeEEecCCCCCeE
Confidence            6778888775    456799999986633                         222 2356999999999999 56789


Q ss_pred             EEEeCCCcEEEeeCCCCe---EEEEeecCCCCCeEEEEEcCC-C---cccCCCeEEEEcCCCC
Q psy8430         287 ITASWDRVANLFDVETGT---ILQSLTGHDEEPHILCVSSYY-S---KVSCDLFQRIQHLDCG  342 (361)
Q Consensus       287 ~s~~~d~~v~iwd~~~~~---~~~~~~~h~~~v~~~~~s~s~-~---~v~~dg~i~iW~~d~~  342 (361)
                      ++|+.||.|.+||+..-.   .+.....|...|..+-+.+.. -   -+++.+.+.+|  ++.
T Consensus       182 lSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~--ele  242 (376)
T KOG1188|consen  182 LSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIY--ELE  242 (376)
T ss_pred             EeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEE--Ecc
Confidence            999999999999987431   122222344455554444331 1   13488999999  553

>KOG2919|consensus

Probab=99.49  E-value=5.9e-13  Score=110.45  Aligned_cols=140  Identities=17%  Similarity=0.266  Sum_probs=114.1

Q ss_pred             cCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC-CCcEEEEecccccc
Q psy8430         160 HRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DKSVHIWQAVINWE  237 (361)
Q Consensus       160 h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~~i~lwd~~~~~~  237 (361)
                      ..+-|.|++|+| +...++.|+.-.++-|+.-..+.++..+-+|.+.|+.++|+++|+.|.+|+. |-.|..||++... 
T Consensus       206 q~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~-  284 (406)
T KOG2919|consen  206 QKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSR-  284 (406)
T ss_pred             ccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhcc-
Confidence            367899999999 5559999999999999999889999999999999999999999999999886 6789999998653 


Q ss_pred             ccCCCCCCCCCCCCCCCCCceecccccEEEeCCCC---cEEEEEEcCCCCEEEEEeCCCcEEEeeCCC-CeEEEEeecCC
Q psy8430         238 CLNNDNDSDLDESKEPDESSITLRTPVKELLGHSN---VVIAADWLSDGEQVITASWDRVANLFDVET-GTILQSLTGHD  313 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~-~~~~~~~~~h~  313 (361)
                                              .++..+..|..   .-.-....|+|++|++|+.||.|++||+.+ |..+..+..|+
T Consensus       285 ------------------------~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~s  340 (406)
T KOG2919|consen  285 ------------------------DPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYS  340 (406)
T ss_pred             ------------------------chhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCccccccccc
Confidence                                    25555555543   333355678999999999999999999997 67677776676


Q ss_pred             CCCeE--------EEEEcC
Q psy8430         314 EEPHI--------LCVSSY  324 (361)
Q Consensus       314 ~~v~~--------~~~s~s  324 (361)
                      ..+..        ++++++
T Consensus       341 d~vNgvslnP~mpilatss  359 (406)
T KOG2919|consen  341 DTVNGVSLNPIMPILATSS  359 (406)
T ss_pred             ccccceecCcccceeeecc
Confidence            66555        666666

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.49  E-value=7.1e-12  Score=114.63  Aligned_cols=164  Identities=30%  Similarity=0.490  Sum_probs=130.9

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC-EEEEEECCCcEE
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVH  228 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~-d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~  228 (361)
                      ......+.+|...|.+++|+|++..+++++. |+.+++|+...+..+..+.+|...|.+++|+|++. .+++++.|+.+.
T Consensus       145 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~  224 (466)
T COG2319         145 GKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIR  224 (466)
T ss_pred             CeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEE
Confidence            5677788899999999999999998888886 99999999998888999999999999999999988 566669999999


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccE-EEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE-E
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVK-ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI-L  306 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~-~  306 (361)
                      +||...+.                          ... .+.+|...+ ...|+|++.++++++.|+.+++||.+.... +
T Consensus       225 ~wd~~~~~--------------------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  277 (466)
T COG2319         225 LWDLSTGK--------------------------LLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLL  277 (466)
T ss_pred             EEECCCCc--------------------------EEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEE
Confidence            99876331                          233 567777775 448999999999999999999999986664 5


Q ss_pred             EEeecCCCCCeEEEEEcC---CCcccCCCeEEEEcCCCCC
Q psy8430         307 QSLTGHDEEPHILCVSSY---YSKVSCDLFQRIQHLDCGT  343 (361)
Q Consensus       307 ~~~~~h~~~v~~~~~s~s---~~~v~~dg~i~iW~~d~~~  343 (361)
                      ..+.+|...+.++.+.+.   ....+.|+.+++|  |..+
T Consensus       278 ~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~--~~~~  315 (466)
T COG2319         278 RTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLW--DLET  315 (466)
T ss_pred             EEEecCCccEEEEEECCCCCEEEEeeCCCcEEEE--EcCC
Confidence            555677777777544441   1112378889999  7733

>KOG2106|consensus

Probab=99.48  E-value=3.2e-12  Score=111.97  Aligned_cols=133  Identities=17%  Similarity=0.285  Sum_probs=105.8

Q ss_pred             EEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccc
Q psy8430         155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI  234 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~  234 (361)
                      .+..+|....+.++.+|+.+.+++++.|+.+++|+  ..+.+.+.. -..++.|+.|+|.| .++.|...|...+.|..+
T Consensus       362 ~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~-~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~  437 (626)
T KOG2106|consen  362 LTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKI-IEDPAECADFHPSG-VVAVGTATGRWFVLDTET  437 (626)
T ss_pred             EEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEE-ecCceeEeeccCcc-eEEEeeccceEEEEeccc
Confidence            34568999999999999999999999999999999  445554444 57889999999999 999999999999999876


Q ss_pred             cccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCC-CCeEEEEeec-C
Q psy8430         235 NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE-TGTILQSLTG-H  312 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~-~~~~~~~~~~-h  312 (361)
                      .                           ....+.....+++.++|+|+|.+|+.|+.|+.|+||.+. +|.....+.- +
T Consensus       438 ~---------------------------~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~  490 (626)
T KOG2106|consen  438 Q---------------------------DLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCS  490 (626)
T ss_pred             c---------------------------eeEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeec
Confidence            4                           333444448899999999999999999999999999876 3444443332 2


Q ss_pred             CCCCeE
Q psy8430         313 DEEPHI  318 (361)
Q Consensus       313 ~~~v~~  318 (361)
                      ..+|+.
T Consensus       491 gs~ith  496 (626)
T KOG2106|consen  491 GSPITH  496 (626)
T ss_pred             CceeEE
Confidence            244444

>KOG0307|consensus

Probab=99.48  E-value=6.4e-14  Score=133.37  Aligned_cols=168  Identities=15%  Similarity=0.178  Sum_probs=125.3

Q ss_pred             CCCeEEEEEcCCCCE----EEEEeCCCcEEEEeCCC---C---eEEEEEeCCCCCeEEEEEecCC-CEEEEEECCCcEEE
Q psy8430         161 RDGVWDVAVRPGQPV----LGSASADRTVRLWSTQT---G---KCVLQYSGHSGSVNSVRFLPNK-DLVLSASGDKSVHI  229 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~----l~s~s~d~~i~~wd~~~---~---~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~i~l  229 (361)
                      ....+.|+|.+.|..    |+.|..||.|.+||...   +   ..+.++..|.+.|..+.|++.. +++++|+.||.|.|
T Consensus        64 ~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~i  143 (1049)
T KOG0307|consen   64 SNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILI  143 (1049)
T ss_pred             cccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEE
Confidence            356889999987664    99999999999999865   2   3456677899999999999954 59999999999999


Q ss_pred             EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEeeCCCCeEEEE
Q psy8430         230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD-GEQVITASWDRVANLFDVETGTILQS  308 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~  308 (361)
                      ||+.+...-..                      +.  -....+.|.+++|+.. ...|++++.+|.+.|||++..+.+-.
T Consensus       144 WDlnn~~tP~~----------------------~~--~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~  199 (1049)
T KOG0307|consen  144 WDLNKPETPFT----------------------PG--SQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIK  199 (1049)
T ss_pred             eccCCcCCCCC----------------------CC--CCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccc
Confidence            99976421100                      00  1124567899999874 45678889999999999998877777


Q ss_pred             eecCCCCCeE-------------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         309 LTGHDEEPHI-------------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       309 ~~~h~~~v~~-------------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      +..|.+...+             +++|.+    -.+-.|.+|  |+   |....++.++++|+.+|
T Consensus       200 ls~~~~~~~~S~l~WhP~~aTql~~As~d----d~~PviqlW--Dl---R~assP~k~~~~H~~Gi  256 (1049)
T KOG0307|consen  200 LSDTPGRMHCSVLAWHPDHATQLLVASGD----DSAPVIQLW--DL---RFASSPLKILEGHQRGI  256 (1049)
T ss_pred             cccCCCccceeeeeeCCCCceeeeeecCC----CCCceeEee--cc---cccCCchhhhcccccce
Confidence            7666553322             233332    134589999  99   77777889999998764

>KOG2394|consensus

Probab=99.47  E-value=1.4e-13  Score=121.27  Aligned_cols=104  Identities=17%  Similarity=0.245  Sum_probs=90.0

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd  231 (361)
                      .++..+.-..+.|...+|+|||.+||+.|.||.++|||+.+.+.+..++..-+...||+|+|||+++++|+.|--|.||.
T Consensus       281 NPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwS  360 (636)
T KOG2394|consen  281 NPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWS  360 (636)
T ss_pred             CccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEE
Confidence            34445555667999999999999999999999999999998887777777778999999999999999999999999996


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS  281 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  281 (361)
                      +.                          .++.+..-.+|.++|..++|+|
T Consensus       361 f~--------------------------erRVVARGqGHkSWVs~VaFDp  384 (636)
T KOG2394|consen  361 FE--------------------------ERRVVARGQGHKSWVSVVAFDP  384 (636)
T ss_pred             ec--------------------------cceEEEeccccccceeeEeecc
Confidence            54                          3356777789999999999986

>KOG1009|consensus

Probab=99.47  E-value=2.5e-13  Score=115.75  Aligned_cols=129  Identities=23%  Similarity=0.308  Sum_probs=112.3

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC--------C--------CeEEEEEeCCCCCeEEEEEec
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ--------T--------GKCVLQYSGHSGSVNSVRFLP  213 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~--------~--------~~~~~~~~~h~~~v~~v~~~~  213 (361)
                      +-+.+..|..|..+|+++.|+|+|++|+||+.+|.|.+|...        +        ......+.+|...|..++|+|
T Consensus        54 ~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~  133 (434)
T KOG1009|consen   54 KVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSP  133 (434)
T ss_pred             eEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccC
Confidence            446778889999999999999999999999999999999765        2        234556778999999999999


Q ss_pred             CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC
Q psy8430         214 NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR  293 (361)
Q Consensus       214 ~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~  293 (361)
                      ++..+++++.|..+++||+..+.                          ....+..|...+..++|.|-.+++++-+.|.
T Consensus       134 d~~~l~s~s~dns~~l~Dv~~G~--------------------------l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr  187 (434)
T KOG1009|consen  134 DSNFLVSGSVDNSVRLWDVHAGQ--------------------------LLAILDDHEHYVQGVAWDPLNQYVASKSSDR  187 (434)
T ss_pred             CCceeeeeeccceEEEEEeccce--------------------------eEeeccccccccceeecchhhhhhhhhccCc
Confidence            99999999999999999998773                          5667778999999999999999999999999


Q ss_pred             cEEEeeCCCCe
Q psy8430         294 VANLFDVETGT  304 (361)
Q Consensus       294 ~v~iwd~~~~~  304 (361)
                      ..+.+.+...+
T Consensus       188 ~~~~~~~~~~~  198 (434)
T KOG1009|consen  188 HPEGFSAKLKQ  198 (434)
T ss_pred             ccceeeeeeee
Confidence            77777766433

>KOG2110|consensus

Probab=99.47  E-value=5.9e-12  Score=106.33  Aligned_cols=128  Identities=14%  Similarity=0.218  Sum_probs=102.5

Q ss_pred             cceeeeEEeec---cCCCeEEEEEcCCCCEEEEEe--CCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC
Q psy8430         149 LSCYKIRSFSG---HRDGVWDVAVRPGQPVLGSAS--ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG  223 (361)
Q Consensus       149 ~~~~~~~~l~~---h~~~V~~l~~~~~~~~l~s~s--~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~  223 (361)
                      .+-++++++..   |...+.++++++.+.+++-=+  ..|.|.+||..+-+++..+..|.+++.+++|+++|.++||+|.
T Consensus       114 ~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASe  193 (391)
T KOG2110|consen  114 KDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASE  193 (391)
T ss_pred             ccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEecc
Confidence            44456666553   455576777777777887543  3589999999999999999999999999999999999999999


Q ss_pred             CCc-EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCC--CCcEEEEEEcCCCCEEEEEeCCCcEEEeeC
Q psy8430         224 DKS-VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGH--SNVVIAADWLSDGEQVITASWDRVANLFDV  300 (361)
Q Consensus       224 d~~-i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~  300 (361)
                      .|+ ||||.+..+.                          .+..++-.  -..|++++|+|++++|.+.+..++|++|.+
T Consensus       194 KGTVIRVf~v~~G~--------------------------kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL  247 (391)
T KOG2110|consen  194 KGTVIRVFSVPEGQ--------------------------KLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKL  247 (391)
T ss_pred             CceEEEEEEcCCcc--------------------------EeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEe
Confidence            997 7899987764                          33344322  346899999999999999999999999988


Q ss_pred             CC
Q psy8430         301 ET  302 (361)
Q Consensus       301 ~~  302 (361)
                      ..
T Consensus       248 ~~  249 (391)
T KOG2110|consen  248 EK  249 (391)
T ss_pred             cc
Confidence            64

>KOG0290|consensus

Probab=99.47  E-value=2.3e-12  Score=105.52  Aligned_cols=191  Identities=17%  Similarity=0.169  Sum_probs=128.1

Q ss_pred             EEeeecCccceeeeEEe-eccCCCeEEEEEcCCCC-----EEEEEeCCCcEEEEeCCCC--eE--EEEE-----eCCCCC
Q psy8430         141 VSSFKTSLLSCYKIRSF-SGHRDGVWDVAVRPGQP-----VLGSASADRTVRLWSTQTG--KC--VLQY-----SGHSGS  205 (361)
Q Consensus       141 ~~~~~~~~~~~~~~~~l-~~h~~~V~~l~~~~~~~-----~l~s~s~d~~i~~wd~~~~--~~--~~~~-----~~h~~~  205 (361)
                      +.+...+...++.+..- ..|.-+++.+-|.|+..     +||+++.  .+|+|.+...  +.  ...+     ..+..+
T Consensus        75 vqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs~D--~LRlWri~~ee~~~~~~~~L~~~kns~~~aP  152 (364)
T KOG0290|consen   75 VQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATSSD--FLRLWRIGDEESRVELQSVLNNNKNSEFCAP  152 (364)
T ss_pred             eEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhcccC--eEEEEeccCcCCceehhhhhccCcccccCCc
Confidence            33333333344433322 36899999999999763     5666543  8999998632  11  1111     235678


Q ss_pred             eEEEEEec-CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCC-
Q psy8430         206 VNSVRFLP-NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG-  283 (361)
Q Consensus       206 v~~v~~~~-~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-  283 (361)
                      +++..|+. +.+++.+++-|.++.|||+.++.                       .......+..|...|+.++|...+ 
T Consensus       153 lTSFDWne~dp~~igtSSiDTTCTiWdie~~~-----------------------~~~vkTQLIAHDKEV~DIaf~~~s~  209 (364)
T KOG0290|consen  153 LTSFDWNEVDPNLIGTSSIDTTCTIWDIETGV-----------------------SGTVKTQLIAHDKEVYDIAFLKGSR  209 (364)
T ss_pred             ccccccccCCcceeEeecccCeEEEEEEeecc-----------------------ccceeeEEEecCcceeEEEeccCcc
Confidence            99999987 77889999999999999997651                       112355678999999999999754 


Q ss_pred             CEEEEEeCCCcEEEeeCCCCeEEEEeecC---CCCCeEEEEEcC---CC-cccC-CCeEEEEcCCCCCCCCcceeeeeec
Q psy8430         284 EQVITASWDRVANLFDVETGTILQSLTGH---DEEPHILCVSSY---YS-KVSC-DLFQRIQHLDCGTSENPIHSVCVFQ  355 (361)
Q Consensus       284 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~h---~~~v~~~~~s~s---~~-~v~~-dg~i~iW~~d~~~~~~~~~~v~~~~  355 (361)
                      ..+++.+.||+|++||++..+.-..+...   +.+...+.+.-.   |. .+.. ...|-|-  |+   |.|..+|..|+
T Consensus       210 ~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iL--Di---R~P~tpva~L~  284 (364)
T KOG0290|consen  210 DVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVIL--DI---RVPCTPVARLR  284 (364)
T ss_pred             ceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEE--Ee---cCCCcceehhh
Confidence            47889999999999999976543333221   112222212111   00 1113 3466777  99   99999999999


Q ss_pred             ccccCC
Q psy8430         356 DIQSTG  361 (361)
Q Consensus       356 ~h~~~~  361 (361)
                      +|++.|
T Consensus       285 ~H~a~V  290 (364)
T KOG0290|consen  285 NHQASV  290 (364)
T ss_pred             cCcccc
Confidence            999875

>KOG1188|consensus

Probab=99.47  E-value=7.8e-13  Score=110.45  Aligned_cols=137  Identities=23%  Similarity=0.345  Sum_probs=109.9

Q ss_pred             CEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec--CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCC
Q psy8430         174 PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP--NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESK  251 (361)
Q Consensus       174 ~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~--~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~  251 (361)
                      +.+|++-..|+|++||..+++.+..|+++...++.++|..  .+..+.+|+.||+|++||++...+.             
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~-------------  107 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAES-------------  107 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhh-------------
Confidence            5788888999999999999999999999999999999987  5778999999999999999876432             


Q ss_pred             CCCCCceecccccEEEeCCC-CcEEEEEEcCCCCEEEEEeC----CCcEEEeeCCCCeE-EEEee-cCCCCCeE------
Q psy8430         252 EPDESSITLRTPVKELLGHS-NVVIAADWLSDGEQVITASW----DRVANLFDVETGTI-LQSLT-GHDEEPHI------  318 (361)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~----d~~v~iwd~~~~~~-~~~~~-~h~~~v~~------  318 (361)
                                 +.....++. .+-.+++.+-.+..+++|+.    |-.|.+||+|..+. +..|. .|..-|++      
T Consensus       108 -----------a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~  176 (376)
T KOG1188|consen  108 -----------ARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPS  176 (376)
T ss_pred             -----------hheeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCC
Confidence                       333444454 45556666556677777653    67799999997765 66664 58888888      


Q ss_pred             ---EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         319 ---LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       319 ---~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                         +++|||     .||.|.|+  |+
T Consensus       177 ~pnlLlSGS-----vDGLvnlf--D~  195 (376)
T KOG1188|consen  177 DPNLLLSGS-----VDGLVNLF--DT  195 (376)
T ss_pred             CCCeEEeec-----ccceEEee--ec
Confidence               778888     99999999  66

>KOG1539|consensus

Probab=99.46  E-value=1.3e-11  Score=114.16  Aligned_cols=164  Identities=13%  Similarity=0.159  Sum_probs=131.2

Q ss_pred             CeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCC
Q psy8430         163 GVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNN  241 (361)
Q Consensus       163 ~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~  241 (361)
                      .|+++...+. -+.++.|+.+|.+.+|++++++.+.+++++...|+++.-+|-=..++.|..+|+|.+++++.++     
T Consensus       161 ~Ital~HP~TYLNKIvvGs~~G~lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dk-----  235 (910)
T KOG1539|consen  161 FITALLHPSTYLNKIVVGSSQGRLQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDK-----  235 (910)
T ss_pred             ceeeEecchhheeeEEEeecCCcEEEEEeccCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCc-----
Confidence            3777754442 4589999999999999999999999999999999999999988899999999999999998773     


Q ss_pred             CCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEE-EEEeCCCcEEEeeCCCCeEEEEee-cCCCCCeE-
Q psy8430         242 DNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV-ITASWDRVANLFDVETGTILQSLT-GHDEEPHI-  318 (361)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~d~~v~iwd~~~~~~~~~~~-~h~~~v~~-  318 (361)
                                           .+..+....+.|++++|..||..+ ++|+..|.+.+||++..+.+..+. .|.+.+.. 
T Consensus       236 ---------------------il~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~  294 (910)
T KOG1539|consen  236 ---------------------ILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGA  294 (910)
T ss_pred             ---------------------EEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccc
Confidence                                 456666556999999999999865 566667999999999888777665 68666655 


Q ss_pred             -------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeeccccc
Q psy8430         319 -------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQS  359 (361)
Q Consensus       319 -------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~  359 (361)
                             +++|++     .|+.+++|-+|.+++.  .+.+..-.||+.
T Consensus       295 ~fl~~epVl~ta~-----~DnSlk~~vfD~~dg~--pR~LR~R~GHs~  335 (910)
T KOG1539|consen  295 TFLPGEPVLVTAG-----ADNSLKVWVFDSGDGV--PRLLRSRGGHSA  335 (910)
T ss_pred             eecCCCceEeecc-----CCCceeEEEeeCCCCc--chheeeccCCCC
Confidence                   889999     9999999977754431  122333346654

>KOG1240|consensus

Probab=99.45  E-value=6.3e-12  Score=120.70  Aligned_cols=193  Identities=16%  Similarity=0.084  Sum_probs=130.9

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCC-------CeEEEEEeCCCCCeEEEEEecCCCEEEE
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQT-------GKCVLQYSGHSGSVNSVRFLPNKDLVLS  220 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~-~~l~s~s~d~~i~~wd~~~-------~~~~~~~~~h~~~v~~v~~~~~~~~l~s  220 (361)
                      .+|.++.+|..|+..|..++.++.. .+|+|||.||+|++||...       .++..++......+.++.+.+.++.+|.
T Consensus      1036 p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av 1115 (1431)
T KOG1240|consen 1036 PRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAV 1115 (1431)
T ss_pred             ccceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEE
Confidence            5678999999999999999988755 8999999999999999853       1455666667899999999999999999


Q ss_pred             EECCCcEEEEeccccccccCCCCCCCCCCCC---------CC--CCCc--------------eecccc----cEEEeCCC
Q psy8430         221 ASGDKSVHIWQAVINWECLNNDNDSDLDESK---------EP--DESS--------------ITLRTP----VKELLGHS  271 (361)
Q Consensus       221 ~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~---------~~--~~~~--------------~~~~~~----~~~~~~~~  271 (361)
                      ++.||.|++.++................+..         .+  ....              +..+..    ........
T Consensus      1116 ~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~h 1195 (1431)
T KOG1240|consen 1116 STKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRH 1195 (1431)
T ss_pred             EcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccc
Confidence            9999999999987631111111111111100         00  0000              000000    00111235


Q ss_pred             CcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec-CCCCCeEEEEEcCCC--c-----c-cCCCeEEEEcCCCC
Q psy8430         272 NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG-HDEEPHILCVSSYYS--K-----V-SCDLFQRIQHLDCG  342 (361)
Q Consensus       272 ~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~-h~~~v~~~~~s~s~~--~-----v-~~dg~i~iW~~d~~  342 (361)
                      +.|++++.+|.+.++++|+..|.+.+||++-+.++..|.. +...+..+.+..-+-  +     + +..+-|.+|  ++.
T Consensus      1196 G~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~w--n~~ 1273 (1431)
T KOG1240|consen 1196 GLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTW--NME 1273 (1431)
T ss_pred             cceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeee--ecc
Confidence            6899999999999999999999999999999999888863 233444322221111  0     0 157889999  663


Q ss_pred             C
Q psy8430         343 T  343 (361)
Q Consensus       343 ~  343 (361)
                      +
T Consensus      1274 ~ 1274 (1431)
T KOG1240|consen 1274 T 1274 (1431)
T ss_pred             c
Confidence            3

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.45  E-value=2.7e-11  Score=106.40  Aligned_cols=163  Identities=17%  Similarity=0.142  Sum_probs=110.2

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCC-cE
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSA-SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK-SV  227 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~-s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~-~i  227 (361)
                      +++.+..+..+.. +..++|+|+++.++++ +.|+.+++||+.+++.+..+. +...+.+++|+|++..+++++.++ .+
T Consensus        62 ~~~~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~~  139 (300)
T TIGR03866        62 TGEVIGTLPSGPD-PELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIP-VGVEPEGMAVSPDGKIVVNTSETTNMA  139 (300)
T ss_pred             CCcEEEeccCCCC-ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEee-CCCCcceEEECCCCCEEEEEecCCCeE
Confidence            3455556655544 5678999999876554 568999999999888777776 344578899999999999988775 46


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEE-eCCCcEEEeeCCCCeEE
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA-SWDRVANLFDVETGTIL  306 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~d~~v~iwd~~~~~~~  306 (361)
                      .+||..++.                          ...... .......++|+|+|++++.+ ..++.|++||+++++++
T Consensus       140 ~~~d~~~~~--------------------------~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~  192 (300)
T TIGR03866       140 HFIDTKTYE--------------------------IVDNVL-VDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVI  192 (300)
T ss_pred             EEEeCCCCe--------------------------EEEEEE-cCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceee
Confidence            677876442                          111121 22345678999999988655 46899999999999887


Q ss_pred             EEeecCCC-----C--CeEEEEEcCCC--cc--cCCCeEEEEcCCCCC
Q psy8430         307 QSLTGHDE-----E--PHILCVSSYYS--KV--SCDLFQRIQHLDCGT  343 (361)
Q Consensus       307 ~~~~~h~~-----~--v~~~~~s~s~~--~v--~~dg~i~iW~~d~~~  343 (361)
                      ..+..+..     .  ...+.++++..  ++  +.++.+.+|  |..+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~--d~~~  238 (300)
T TIGR03866       193 KKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVV--DAKT  238 (300)
T ss_pred             eeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEE--ECCC
Confidence            77653211     1  11233333211  11  257789999  7743

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.43  E-value=7e-11  Score=108.02  Aligned_cols=156  Identities=33%  Similarity=0.539  Sum_probs=126.1

Q ss_pred             eeEEeeccC-CCeEEEEE-cCCCC-EEEEEeC-CCcEEEEeCCC-CeEEEEEeCCCCCeEEEEEecCCCEEEEEEC-CCc
Q psy8430         153 KIRSFSGHR-DGVWDVAV-RPGQP-VLGSASA-DRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DKS  226 (361)
Q Consensus       153 ~~~~l~~h~-~~V~~l~~-~~~~~-~l~s~s~-d~~i~~wd~~~-~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~~  226 (361)
                      .+..+.++. ..+..+.+ ++++. .++..+. |+.+.+|+... ......+..|...|.+++|+|++..+++++. |+.
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~  179 (466)
T COG2319         100 LIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGT  179 (466)
T ss_pred             eEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCc
Confidence            555666644 37778877 88887 5555455 99999999987 7888889999999999999999998888886 999


Q ss_pred             EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEeeCCCCeE
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITASWDRVANLFDVETGTI  305 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~~  305 (361)
                      +++|++..+                          .....+.+|...+..++|+|++. .+++++.|+.|++||..++..
T Consensus       180 ~~~~~~~~~--------------------------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~  233 (466)
T COG2319         180 IKLWDLRTG--------------------------KPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKL  233 (466)
T ss_pred             eEEEEcCCC--------------------------ceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcE
Confidence            999998753                          25666777999999999999998 555559999999999998888


Q ss_pred             EE-EeecCCCCC-eE------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         306 LQ-SLTGHDEEP-HI------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       306 ~~-~~~~h~~~v-~~------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      +. .+.+|.... ..      ++++++     .|+.+++|  |.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~~~~--~~  270 (466)
T COG2319         234 LRSTLSGHSDSVVSSFSPDGSLLASGS-----SDGTIRLW--DL  270 (466)
T ss_pred             EeeecCCCCcceeEeECCCCCEEEEec-----CCCcEEEe--ee
Confidence            88 688887763 21      445666     99999999  77

>KOG2106|consensus

Probab=99.41  E-value=4.2e-11  Score=105.07  Aligned_cols=171  Identities=20%  Similarity=0.240  Sum_probs=125.3

Q ss_pred             eccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe--------------------
Q psy8430         135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--------------------  194 (361)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~--------------------  194 (361)
                      +..+..+.+|..  ..++..+....|.+.|.+++.-.+|.+| +|+.|+.|..||-.-.+                    
T Consensus       263 gDS~G~i~Iw~~--~~~~~~k~~~aH~ggv~~L~~lr~Gtll-SGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~  339 (626)
T KOG2106|consen  263 GDSGGNILIWSK--GTNRISKQVHAHDGGVFSLCMLRDGTLL-SGGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGK  339 (626)
T ss_pred             ecCCceEEEEeC--CCceEEeEeeecCCceEEEEEecCccEe-ecCccceEEeccccccccccccCchhcCCeeEEecCC
Confidence            444445555555  4556666666999999999999999555 59999999999842100                    


Q ss_pred             --------------------EEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCC
Q psy8430         195 --------------------CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPD  254 (361)
Q Consensus       195 --------------------~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~  254 (361)
                                          ...+..+|......++.+|+.+.++|++.|+.+++|+- ..                   
T Consensus       340 ~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~~-~k-------------------  399 (626)
T KOG2106|consen  340 GDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWND-HK-------------------  399 (626)
T ss_pred             CcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEccC-Cc-------------------
Confidence                                00123478889999999999999999999999999982 11                   


Q ss_pred             CCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC--cc-cCC
Q psy8430         255 ESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS--KV-SCD  331 (361)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~--~v-~~d  331 (361)
                              +.. -..-..++.++.|+|.| .++.|+..|...+.|.++...+..-.. ..+++++.++.++.  +| +.|
T Consensus       400 --------~~w-t~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d  468 (626)
T KOG2106|consen  400 --------LEW-TKIIEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHD  468 (626)
T ss_pred             --------eeE-EEEecCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEec-CCceEEEEEcCCCCEEEEecCC
Confidence                    111 12245688899999999 999999999999999999766665555 77777744444422  22 399


Q ss_pred             CeEEEEcC
Q psy8430         332 LFQRIQHL  339 (361)
Q Consensus       332 g~i~iW~~  339 (361)
                      +.|.||..
T Consensus       469 ~~iyiy~V  476 (626)
T KOG2106|consen  469 NHIYIYRV  476 (626)
T ss_pred             CeEEEEEE
Confidence            99999933

>KOG1272|consensus

Probab=99.41  E-value=9.9e-13  Score=114.00  Aligned_cols=161  Identities=17%  Similarity=0.200  Sum_probs=128.0

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEE
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  228 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~  228 (361)
                      ..+..++-++.| ..|..+.|-|..-+|++++..|.++.-|+.+|+.+..+..-.+.+..++-+|....+-+|...|+|.
T Consensus       198 ~~GtElHClk~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVS  276 (545)
T KOG1272|consen  198 NNGTELHCLKRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVS  276 (545)
T ss_pred             CCCcEEeehhhc-CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEE
Confidence            344556666665 5588999999998999999999999999999999999988888999999999988999999999999


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEE
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS  308 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~  308 (361)
                      +|.....                          .|+..+..|.++|.+++++++|.|++|++.|..++|||+++...+.+
T Consensus       277 lWSP~sk--------------------------ePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t  330 (545)
T KOG1272|consen  277 LWSPNSK--------------------------EPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHT  330 (545)
T ss_pred             ecCCCCc--------------------------chHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccce
Confidence            9976543                          47778889999999999999999999999999999999998877666


Q ss_pred             eecCCCCCeEEEEEcC-CCcccCCCeEEEE
Q psy8430         309 LTGHDEEPHILCVSSY-YSKVSCDLFQRIQ  337 (361)
Q Consensus       309 ~~~h~~~v~~~~~s~s-~~~v~~dg~i~iW  337 (361)
                      +.. ..+...+.+|-- ..+++....|.||
T Consensus       331 ~~t-p~~a~~ls~SqkglLA~~~G~~v~iw  359 (545)
T KOG1272|consen  331 YRT-PHPASNLSLSQKGLLALSYGDHVQIW  359 (545)
T ss_pred             eec-CCCccccccccccceeeecCCeeeee
Confidence            654 122222111111 1112256678899

>KOG1523|consensus

Probab=99.40  E-value=1.1e-11  Score=102.81  Aligned_cols=152  Identities=16%  Similarity=0.210  Sum_probs=124.0

Q ss_pred             EeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC---eEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430         156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG---KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       156 ~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~---~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~  232 (361)
                      .+.--..+|+|.+|++|+..+|.+-....|.||.....   +..+++..|...|+.|.|+|..+.+++|+.|..-.+|..
T Consensus         5 ~~~~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~   84 (361)
T KOG1523|consen    5 VFHRLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQ   84 (361)
T ss_pred             EeeeccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCcccccc
Confidence            34445689999999999999999999999999988654   578899999999999999999999999999999999987


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCe--------
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT--------  304 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~--------  304 (361)
                      ..+                       ..+.+...+..+...++++.|+|..+.+++|+....|.||-++.-.        
T Consensus        85 ~~~-----------------------~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhi  141 (361)
T KOG1523|consen   85 PSG-----------------------GTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHI  141 (361)
T ss_pred             CCC-----------------------CeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhh
Confidence            432                       3345777777889999999999999999999999999999876422        


Q ss_pred             --E----EEEeecCCCCCeEEEEEcCCCcccCCCeEEEE
Q psy8430         305 --I----LQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQ  337 (361)
Q Consensus       305 --~----~~~~~~h~~~v~~~~~s~s~~~v~~dg~i~iW  337 (361)
                        +    +.++.=|...|  +++.|+     .|+..||+
T Consensus       142 kkPirStv~sldWhpnnV--LlaaGs-----~D~k~rVf  173 (361)
T KOG1523|consen  142 KKPIRSTVTSLDWHPNNV--LLAAGS-----TDGKCRVF  173 (361)
T ss_pred             CCccccceeeeeccCCcc--eecccc-----cCcceeEE
Confidence              1    12222232222  788888     99999988

>KOG0322|consensus

Probab=99.39  E-value=3.5e-12  Score=103.09  Aligned_cols=156  Identities=19%  Similarity=0.173  Sum_probs=117.0

Q ss_pred             cCCCeEEEEEcC-CCC--EEEEEeCCCcEEEEeCCCCeEEEE----------EeCCCCCeEEEEEecCCCEEEEEECCCc
Q psy8430         160 HRDGVWDVAVRP-GQP--VLGSASADRTVRLWSTQTGKCVLQ----------YSGHSGSVNSVRFLPNKDLVLSASGDKS  226 (361)
Q Consensus       160 h~~~V~~l~~~~-~~~--~l~s~s~d~~i~~wd~~~~~~~~~----------~~~h~~~v~~v~~~~~~~~l~s~~~d~~  226 (361)
                      -.+.|.|..|.. ++.  ++++|-.+|.+.+||+.++..+..          ...|..+|.++.|.+.-..=++|+.+..
T Consensus       149 Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dk  228 (323)
T KOG0322|consen  149 KLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDK  228 (323)
T ss_pred             ccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCcccc
Confidence            457788887654 233  677778899999999998844333          3368999999999876555567777888


Q ss_pred             EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEE
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  306 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~  306 (361)
                      +..|.+.-....                      -+.-.........|..+.+-||++.+++++.|+.|+||..+++.++
T Consensus       229 l~~~Sl~~s~gs----------------------lq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pL  286 (323)
T KOG0322|consen  229 LVMYSLNHSTGS----------------------LQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPL  286 (323)
T ss_pred             ceeeeeccccCc----------------------ccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCch
Confidence            889987532110                      0111222334456788889999999999999999999999999999


Q ss_pred             EEeecCCCCCeEEEEEcCC---CcccCCCeEEEE
Q psy8430         307 QSLTGHDEEPHILCVSSYY---SKVSCDLFQRIQ  337 (361)
Q Consensus       307 ~~~~~h~~~v~~~~~s~s~---~~v~~dg~i~iW  337 (361)
                      ..++-|+..|.++.+++..   +.-+.|+.|.+|
T Consensus       287 AVLkyHsagvn~vAfspd~~lmAaaskD~rISLW  320 (323)
T KOG0322|consen  287 AVLKYHSAGVNAVAFSPDCELMAAASKDARISLW  320 (323)
T ss_pred             hhhhhhhcceeEEEeCCCCchhhhccCCceEEee
Confidence            9999999999996666551   123599999999

>KOG0644|consensus

Probab=99.36  E-value=1.4e-12  Score=120.44  Aligned_cols=183  Identities=21%  Similarity=0.331  Sum_probs=130.2

Q ss_pred             eeeeeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEE
Q psy8430         130 TNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV  209 (361)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v  209 (361)
                      .+.+.+..+..+++|.  ..+..+..+..||.+.|+.++.+.+..+++++|.|..|++|.+..+.++..+.+|.+.|+++
T Consensus       203 ~~Iitgsdd~lvKiwS--~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtai  280 (1113)
T KOG0644|consen  203 RYIITGSDDRLVKIWS--METARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAI  280 (1113)
T ss_pred             ceEeecCccceeeeee--ccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhccccceeee
Confidence            4555666666677776  46778889999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCCCEEEEEECCCcEEEEecccc-cc-ccCCCCC------------------------CCCCC--------------
Q psy8430         210 RFLPNKDLVLSASGDKSVHIWQAVIN-WE-CLNNDND------------------------SDLDE--------------  249 (361)
Q Consensus       210 ~~~~~~~~l~s~~~d~~i~lwd~~~~-~~-~~~~~~~------------------------~~~~~--------------  249 (361)
                      +|+|-.    +.+.||++++||.+-. .. ++.....                        .+...              
T Consensus       281 afsP~~----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~li  356 (1113)
T KOG0644|consen  281 AFSPRA----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLAWRSNLLI  356 (1113)
T ss_pred             ccCccc----cCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccccccccCCcccccchhhHhhhhccceE
Confidence            999964    7788999999998811 00 0000000                        00000              


Q ss_pred             ---CCCCCCCc------------e--ecccccEEEeCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEeeCCCCeEEEEee-
Q psy8430         250 ---SKEPDESS------------I--TLRTPVKELLGHSNVVIAADWLSDGE-QVITASWDRVANLFDVETGTILQSLT-  310 (361)
Q Consensus       250 ---~~~~~~~~------------~--~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~-  310 (361)
                         ........            +  ......+.+.+|...++.+.+||-.. ...+++.||...|||+-.|.+++.+. 
T Consensus       357 f~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~  436 (1113)
T KOG0644|consen  357 FVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFI  436 (1113)
T ss_pred             EEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeec
Confidence               00000000            0  00011233456888999999999555 45678999999999999998887664 


Q ss_pred             cCCCCCeE
Q psy8430         311 GHDEEPHI  318 (361)
Q Consensus       311 ~h~~~v~~  318 (361)
                      +|...+.+
T Consensus       437 gh~kl~d~  444 (1113)
T KOG0644|consen  437 GHGKLVDG  444 (1113)
T ss_pred             ccceeecc
Confidence            45444444

>KOG2055|consensus

Probab=99.36  E-value=2.5e-11  Score=105.31  Aligned_cols=132  Identities=15%  Similarity=0.221  Sum_probs=105.0

Q ss_pred             eeecCccceeeeEEeeccC-CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEE
Q psy8430         143 SFKTSLLSCYKIRSFSGHR-DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA  221 (361)
Q Consensus       143 ~~~~~~~~~~~~~~l~~h~-~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~  221 (361)
                      +|.........+..+.|+. ..+....++|++++|+..|..|.|.+-...+++.+..++ -.+.|..++|+.+++.|+.+
T Consensus       284 syDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~K-ieG~v~~~~fsSdsk~l~~~  362 (514)
T KOG2055|consen  284 SYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK-IEGVVSDFTFSSDSKELLAS  362 (514)
T ss_pred             EeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheee-eccEEeeEEEecCCcEEEEE
Confidence            3333334444555555665 456677899999999999999999999999999998888 67899999999999999999


Q ss_pred             ECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCC-CcEEEEEEcCCCCEEEEEeCCCcEEEeeC
Q psy8430         222 SGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHS-NVVIAADWLSDGEQVITASWDRVANLFDV  300 (361)
Q Consensus       222 ~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~d~~v~iwd~  300 (361)
                      +.+|.|.+||++...                          ++..+.... -.-++++.+++|.|+++|+..|.|.|||.
T Consensus       363 ~~~GeV~v~nl~~~~--------------------------~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~  416 (514)
T KOG2055|consen  363 GGTGEVYVWNLRQNS--------------------------CLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDG  416 (514)
T ss_pred             cCCceEEEEecCCcc--------------------------eEEEEeecCccceeeeeecCCCceEEeccCcceEEEecc
Confidence            999999999998652                          444443221 23456778899999999999999999996


Q ss_pred             C
Q psy8430         301 E  301 (361)
Q Consensus       301 ~  301 (361)
                      .
T Consensus       417 ~  417 (514)
T KOG2055|consen  417 N  417 (514)
T ss_pred             c
Confidence            5

>KOG1524|consensus

Probab=99.36  E-value=4.8e-12  Score=111.69  Aligned_cols=147  Identities=17%  Similarity=0.265  Sum_probs=118.2

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEE
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  228 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~  228 (361)
                      ..++..+.+..|.++|.|-.|+|+|.-|+++|.||.|++|.- +|-...++-....+|.|++|.|++..++-+.. +.+.
T Consensus        92 k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSr-sGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g-~h~~  169 (737)
T KOG1524|consen   92 KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSR-SGMLRSTVVQNEESIRCARWAPNSNSIVFCQG-GHIS  169 (737)
T ss_pred             ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEec-cchHHHHHhhcCceeEEEEECCCCCceEEecC-CeEE
Confidence            455666778899999999999999999999999999999995 56544455456789999999998776655433 3344


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEE
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS  308 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~  308 (361)
                      |=.+.                          ....+-.+..|.+-|.++.|++..+.+++|+.|-..+|||.. |..+.+
T Consensus       170 IKpL~--------------------------~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~  222 (737)
T KOG1524|consen  170 IKPLA--------------------------ANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLFT  222 (737)
T ss_pred             Eeecc--------------------------cccceeEEeccCcEEEEeecCccccceeecCCceeEEeeccc-Cccccc
Confidence            43322                          223566778999999999999999999999999999999976 888888


Q ss_pred             eecCCCCCeEEEEEcC
Q psy8430         309 LTGHDEEPHILCVSSY  324 (361)
Q Consensus       309 ~~~h~~~v~~~~~s~s  324 (361)
                      -..|..+|+++.+.+.
T Consensus       223 S~~~ey~ITSva~npd  238 (737)
T KOG1524|consen  223 SAAEEYAITSVAFNPE  238 (737)
T ss_pred             CChhccceeeeeeccc
Confidence            8889999999666554

>KOG1587|consensus

Probab=99.36  E-value=1.8e-11  Score=113.16  Aligned_cols=180  Identities=17%  Similarity=0.122  Sum_probs=121.4

Q ss_pred             cCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeE--EEE----EeCCCCCeEEEEEecCCC--EEEEEECCCcEEEE
Q psy8430         160 HRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKC--VLQ----YSGHSGSVNSVRFLPNKD--LVLSASGDKSVHIW  230 (361)
Q Consensus       160 h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~--~~~----~~~h~~~v~~v~~~~~~~--~l~s~~~d~~i~lw  230 (361)
                      -...|+|++|+| +.++++.|..+|.|.+||+..+..  ...    ...|..+|+.+.|..+..  -|++++.||.|+.|
T Consensus       241 ~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W  320 (555)
T KOG1587|consen  241 SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSW  320 (555)
T ss_pred             cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeee
Confidence            457899999999 667999999999999999987643  222    235899999999987544  49999999999999


Q ss_pred             eccccccccCCC-CCCCC---------------CCCC---------CCCCCce------------ecccccEEEeCCCCc
Q psy8430         231 QAVINWECLNND-NDSDL---------------DESK---------EPDESSI------------TLRTPVKELLGHSNV  273 (361)
Q Consensus       231 d~~~~~~~~~~~-~~~~~---------------~~~~---------~~~~~~~------------~~~~~~~~~~~~~~~  273 (361)
                      +++.-..-.... .....               ....         ...+...            ...++...+..|.++
T Consensus       321 ~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~  400 (555)
T KOG1587|consen  321 DTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGP  400 (555)
T ss_pred             eccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcc
Confidence            876443211000 00000               0000         0000000            011223355568899


Q ss_pred             EEEEEEcCCCCEEEEEeCCCcEEEeeCC-CCeEEEEeecCCCCCeEEEEEcC----CCcccCCCeEEEEcCCC
Q psy8430         274 VIAADWLSDGEQVITASWDRVANLFDVE-TGTILQSLTGHDEEPHILCVSSY----YSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       274 v~~~~~~~~~~~l~s~~~d~~v~iwd~~-~~~~~~~~~~h~~~v~~~~~s~s----~~~v~~dg~i~iW~~d~  341 (361)
                      |+++.++|-+..++..+.|.+|+||... ...++..+..+...++++.+|..    |..+..||.|.||  |+
T Consensus       401 v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iW--DL  471 (555)
T KOG1587|consen  401 VYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIW--DL  471 (555)
T ss_pred             eEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehh--hh
Confidence            9999999988777766669999999987 66777777777777777444444    2223389999999  65

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.36  E-value=9.6e-11  Score=95.57  Aligned_cols=143  Identities=14%  Similarity=0.148  Sum_probs=96.6

Q ss_pred             EEEEcCCCCEEEEEeC---C-------CcEEEEeCCC-CeEEEEEeC-CCCCeEEEEEecCCCEEEEE--ECCCcEEEEe
Q psy8430         166 DVAVRPGQPVLGSASA---D-------RTVRLWSTQT-GKCVLQYSG-HSGSVNSVRFLPNKDLVLSA--SGDKSVHIWQ  231 (361)
Q Consensus       166 ~l~~~~~~~~l~s~s~---d-------~~i~~wd~~~-~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~--~~d~~i~lwd  231 (361)
                      .+.|+|.|.+|+.-..   |       +...+|.++. +.....+.- ..++|.+++|+|+|+.|+..  ..++.|.+||
T Consensus        10 ~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd   89 (194)
T PF08662_consen   10 KLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYD   89 (194)
T ss_pred             EEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEc
Confidence            5679999986554332   1       2344555522 233333332 45679999999999987654  4567999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC---CcEEEeeCCCCeEEEE
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD---RVANLFDVETGTILQS  308 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~v~iwd~~~~~~~~~  308 (361)
                      ++..                           ++..+  +...+..+.|+|+|+++++++.+   |.+.+||+++.+.+.+
T Consensus        90 ~~~~---------------------------~i~~~--~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~  140 (194)
T PF08662_consen   90 VKGK---------------------------KIFSF--GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKIST  140 (194)
T ss_pred             Cccc---------------------------EeEee--cCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeec
Confidence            8522                           34444  35677889999999999998754   5699999999998887


Q ss_pred             eecCCCCCeEEEEEcCCC---------cccCCCeEEEEcCCC
Q psy8430         309 LTGHDEEPHILCVSSYYS---------KVSCDLFQRIQHLDC  341 (361)
Q Consensus       309 ~~~h~~~v~~~~~s~s~~---------~v~~dg~i~iW~~d~  341 (361)
                      ... .. +..+.+++++-         ....|+.++||  +.
T Consensus       141 ~~~-~~-~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw--~~  178 (194)
T PF08662_consen  141 FEH-SD-ATDVEWSPDGRYLATATTSPRLRVDNGFKIW--SF  178 (194)
T ss_pred             ccc-Cc-EEEEEEcCCCCEEEEEEeccceeccccEEEE--Ee
Confidence            753 32 34545555422         12358999999  55

>KOG0650|consensus

Probab=99.36  E-value=8.1e-12  Score=111.59  Aligned_cols=164  Identities=22%  Similarity=0.185  Sum_probs=130.7

Q ss_pred             eeecCccceeeeEEeec---------cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec
Q psy8430         143 SFKTSLLSCYKIRSFSG---------HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP  213 (361)
Q Consensus       143 ~~~~~~~~~~~~~~l~~---------h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~  213 (361)
                      +...+..+..+++.|.-         ..+.|.++.|+|...+|+.++. ..|++||+.....+..+..-...|..++.+|
T Consensus       539 V~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL~tg~kwiS~msihp  617 (733)
T KOG0650|consen  539 VMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKLLTGSKWISSMSIHP  617 (733)
T ss_pred             eccCCCcceEEEEecccccccCchhhcCCceeEEEecCCCceEEEEec-cceEEEehhHHHHHHHHhcCCeeeeeeeecC
Confidence            33334455566666653         3577999999999998888876 5899999987766666665667889999999


Q ss_pred             CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC
Q psy8430         214 NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR  293 (361)
Q Consensus       214 ~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~  293 (361)
                      .|..|+.++.|+.++.||+.-.                         .++.+.+..|...+++++||+.-.++++|+.||
T Consensus       618 ~GDnli~gs~d~k~~WfDldls-------------------------skPyk~lr~H~~avr~Va~H~ryPLfas~sdDg  672 (733)
T KOG0650|consen  618 NGDNLILGSYDKKMCWFDLDLS-------------------------SKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDG  672 (733)
T ss_pred             CCCeEEEecCCCeeEEEEcccC-------------------------cchhHHhhhhhhhhhhhhhccccceeeeecCCC
Confidence            9999999999999999998643                         237888899999999999999999999999999


Q ss_pred             cEEEeeCC--C-------CeEEEEeecCCCC----CeE--------EEEEcCCCcccCCCeEEEE
Q psy8430         294 VANLFDVE--T-------GTILQSLTGHDEE----PHI--------LCVSSYYSKVSCDLFQRIQ  337 (361)
Q Consensus       294 ~v~iwd~~--~-------~~~~~~~~~h~~~----v~~--------~~~s~s~~~v~~dg~i~iW  337 (361)
                      ++.||.-.  +       --++..+.+|...    |..        .++|++     .||+|++|
T Consensus       673 tv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAG-----Ad~tirlf  732 (733)
T KOG0650|consen  673 TVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAG-----ADGTIRLF  732 (733)
T ss_pred             cEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecC-----CCceEEee
Confidence            99998632  1       1346777788654    332        789999     99999999

>KOG1538|consensus

Probab=99.34  E-value=1.5e-11  Score=111.24  Aligned_cols=192  Identities=16%  Similarity=0.152  Sum_probs=119.4

Q ss_pred             eecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--------eEEEEE----------------
Q psy8430         144 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--------KCVLQY----------------  199 (361)
Q Consensus       144 ~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~--------~~~~~~----------------  199 (361)
                      +..+.+++..+.+++||+..|+|++|+.||..++||+.|..|.+|+..-.        ..++..                
T Consensus        36 liyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkYSH~D~IQCMsFNP~~h~LasCsLsd  115 (1081)
T KOG1538|consen   36 LVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYSHNDAIQCMSFNPITHQLASCSLSD  115 (1081)
T ss_pred             EEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccceeeeccCCeeeEeecCchHHHhhhcchhh
Confidence            34456788899999999999999999999999999999999999986421        111110                


Q ss_pred             ----e---------CCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCC-CCCCCCCC-----CCCCCC----
Q psy8430         200 ----S---------GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNND-NDSDLDES-----KEPDES----  256 (361)
Q Consensus       200 ----~---------~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~-~~~~~~~~-----~~~~~~----  256 (361)
                          .         .....|.+.+|..||++|+-|-.||+|.+-+-.......-.. .-...+.+     .....+    
T Consensus       116 FglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di  195 (1081)
T KOG1538|consen  116 FGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDI  195 (1081)
T ss_pred             ccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCCCCCCccce
Confidence                0         012456777888889999999999999987543222211100 00000000     000000    


Q ss_pred             --ceeccc--ccEEEeC--------CCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE------
Q psy8430         257 --SITLRT--PVKELLG--------HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI------  318 (361)
Q Consensus       257 --~~~~~~--~~~~~~~--------~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~------  318 (361)
                        .....+  ....+.|        -.-...++++.++|.|++.|+.|+.+.+|- +.|-.+.++.....-|..      
T Consensus       196 ~aV~DW~qTLSFy~LsG~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~PN  274 (1081)
T KOG1538|consen  196 LAVADWGQTLSFYQLSGKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQAKPN  274 (1081)
T ss_pred             EEEEeccceeEEEEecceeecccccCCCCchhheeccCCcEEEEccCCCceEEEe-ecCeEEeeccccceeEEEEEEccC
Confidence              001111  1111211        112345678888999999999999999986 446666666544444444      


Q ss_pred             --EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         319 --LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       319 --~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                        .++.|.     .||+|-.||+-.
T Consensus       275 sQ~v~~GC-----qDGTiACyNl~f  294 (1081)
T KOG1538|consen  275 SQYVVVGC-----QDGTIACYNLIF  294 (1081)
T ss_pred             CceEEEEE-----ccCeeehhhhHH
Confidence              344455     899999995444

>KOG2110|consensus

Probab=99.33  E-value=3.2e-10  Score=96.01  Aligned_cols=166  Identities=15%  Similarity=0.220  Sum_probs=111.5

Q ss_pred             cCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCc-EEEEeCCCCeEEEEEeCC--CCCeEEEEEecCCCEEEEEE
Q psy8430         146 TSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRT-VRLWSTQTGKCVLQYSGH--SGSVNSVRFLPNKDLVLSAS  222 (361)
Q Consensus       146 ~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~-i~~wd~~~~~~~~~~~~h--~~~v~~v~~~~~~~~l~s~~  222 (361)
                      .+..+.+.+.++..|.+++-|++|+++|.+||++|..|+ ||+|.+.+|+.+..|+.-  -..|.+++|+|++++|++.+
T Consensus       158 ~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS  237 (391)
T KOG2110|consen  158 FDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASS  237 (391)
T ss_pred             EEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEec
Confidence            344667888899999999999999999999999999997 789999999999999732  34688999999999999999


Q ss_pred             CCCcEEEEeccccccccCCCCCCCCCCC----------CCCCCC--ceecccccEEEeCCCC---cEEEEEEcCCCCEEE
Q psy8430         223 GDKSVHIWQAVINWECLNNDNDSDLDES----------KEPDES--SITLRTPVKELLGHSN---VVIAADWLSDGEQVI  287 (361)
Q Consensus       223 ~d~~i~lwd~~~~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~  287 (361)
                      ..++|++|.+........ ........+          ..+...  .+...+.........+   .+.++.-.+...++.
T Consensus       238 ~TeTVHiFKL~~~~~~~~-~~p~~~~~~~~~~sk~~~sylps~V~~~~~~~R~FAt~~l~~s~~~~~~~l~~~~~~~~v~  316 (391)
T KOG2110|consen  238 NTETVHIFKLEKVSNNPP-ESPTAGTSWFGKVSKAATSYLPSQVSSVLDQSRKFATAKLPESGRKNICSLSSIQKIPRVL  316 (391)
T ss_pred             CCCeEEEEEecccccCCC-CCCCCCCcccchhhhhhhhhcchhhhhhhhhccceeEEEccCCCccceEEeeccCCCCEEE
Confidence            999999999875531111 100000000          000000  0111122222222222   233333335788999


Q ss_pred             EEeCCCcEEEeeCC--CCeEEEEeecC
Q psy8430         288 TASWDRVANLFDVE--TGTILQSLTGH  312 (361)
Q Consensus       288 s~~~d~~v~iwd~~--~~~~~~~~~~h  312 (361)
                      .++.||.++.|.+.  +|..+..++.|
T Consensus       317 vas~dG~~y~y~l~~~~gGec~lik~h  343 (391)
T KOG2110|consen  317 VASYDGHLYSYRLPPKEGGECALIKRH  343 (391)
T ss_pred             EEEcCCeEEEEEcCCCCCceeEEEEee
Confidence            99999999999765  45445555544

>KOG3881|consensus

Probab=99.32  E-value=1.1e-10  Score=99.35  Aligned_cols=161  Identities=18%  Similarity=0.295  Sum_probs=125.4

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCC-EEEEEeCC--CcEEEEeCCCCeEEEEEeC---------CCCCeEEEEEecC--CCE
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQP-VLGSASAD--RTVRLWSTQTGKCVLQYSG---------HSGSVNSVRFLPN--KDL  217 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d--~~i~~wd~~~~~~~~~~~~---------h~~~v~~v~~~~~--~~~  217 (361)
                      .....+..| ..+..+.-++... ++++||..  ..+.+||++..+.+..-+.         -.-.++++.|-+.  ...
T Consensus       140 s~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~  218 (412)
T KOG3881|consen  140 SKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYK  218 (412)
T ss_pred             ccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCce
Confidence            334444444 4466666666444 66669988  8899999988755433221         1135568889887  778


Q ss_pred             EEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy8430         218 VLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANL  297 (361)
Q Consensus       218 l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~i  297 (361)
                      |++++.-+.+++||++.+                         ++|+..+.--..+++++...|+|+++++|..-+.+..
T Consensus       219 fat~T~~hqvR~YDt~~q-------------------------RRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~  273 (412)
T KOG3881|consen  219 FATITRYHQVRLYDTRHQ-------------------------RRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAK  273 (412)
T ss_pred             EEEEecceeEEEecCccc-------------------------CcceeEeccccCcceeeeecCCCcEEEEecccchhhe
Confidence            999999999999998644                         5688888888899999999999999999999999999


Q ss_pred             eeCCCCeEEEE-eecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCC
Q psy8430         298 FDVETGTILQS-LTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSEN  346 (361)
Q Consensus       298 wd~~~~~~~~~-~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~  346 (361)
                      ||++.++.... +.+.++.+++        ++++++     -|..|||+  |+.| |.
T Consensus       274 FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~G-----LDRyvRIh--D~kt-rk  323 (412)
T KOG3881|consen  274 FDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCG-----LDRYVRIH--DIKT-RK  323 (412)
T ss_pred             ecccCceeeccccCCccCCcceEEEcCCCceEEeec-----cceeEEEe--eccc-ch
Confidence            99999988776 7777777776        788888     99999999  6644 44

>KOG2111|consensus

Probab=99.31  E-value=5.3e-10  Score=92.96  Aligned_cols=142  Identities=14%  Similarity=0.164  Sum_probs=101.5

Q ss_pred             EEeeccCCCeEEEEEcCCCCEEEEEeCCCc-EEEEeCCCCeEEEEEeC--CCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430         155 RSFSGHRDGVWDVAVRPGQPVLGSASADRT-VRLWSTQTGKCVLQYSG--HSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~-i~~wd~~~~~~~~~~~~--h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd  231 (361)
                      ..+..|.+.|.|++.+.+|.++||+|..|| |||||..+|..+..++.  ....|.|++|+|+..+|+.+|..|+++||.
T Consensus       175 ~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~  254 (346)
T KOG2111|consen  175 SIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFS  254 (346)
T ss_pred             eEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEE
Confidence            567799999999999999999999999997 89999999999999873  346799999999999999999999999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEe
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLF  298 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iw  298 (361)
                      ++.........+......  .--............+.-..+....++|-.+.+.++..+.||+.+-+
T Consensus       255 l~~~~~~~~~~SSl~~~~--~~lpky~~S~wS~~~f~l~~~~~~~~~fg~~~nsvi~i~~Dgsy~k~  319 (346)
T KOG2111|consen  255 LRDTENTEDESSSLSFKR--LVLPKYFSSEWSFAKFQLPQGTQCIIAFGSETNTVIAICADGSYYKF  319 (346)
T ss_pred             eecCCCCccccccccccc--cccchhcccceeEEEEEccCCCcEEEEecCCCCeEEEEEeCCcEEEE
Confidence            875432222110000000  00000111112344444556677788887776777777788887643

>KOG1538|consensus

Probab=99.29  E-value=6.5e-11  Score=107.24  Aligned_cols=159  Identities=19%  Similarity=0.302  Sum_probs=110.0

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCC
Q psy8430         163 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNND  242 (361)
Q Consensus       163 ~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~  242 (361)
                      .|..++|.|||..|+.+.. ..+.+||...|..+.++++|.+.|.||+|+.+|+.|++|+.|+.|.+|...-...+.. .
T Consensus        14 ci~d~afkPDGsqL~lAAg-~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkY-S   91 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAAG-SRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKY-S   91 (1081)
T ss_pred             chheeEECCCCceEEEecC-CEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccceeee-c
Confidence            7899999999997766654 4788999999999999999999999999999999999999999999998654322221 1


Q ss_pred             CCCCCCCCCCCCCC---------ceecccc-cEEEe--CCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430         243 NDSDLDESKEPDES---------SITLRTP-VKELL--GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       243 ~~~~~~~~~~~~~~---------~~~~~~~-~~~~~--~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~  310 (361)
                      ....+......+..         .+..+.+ -+...  .....+.+++|..||.+++.|..+|+|.+-+- +|+....+.
T Consensus        92 H~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk-~gEek~~I~  170 (1081)
T KOG1538|consen   92 HNDAIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNK-NGEEKVKIE  170 (1081)
T ss_pred             cCCeeeEeecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecC-CCCcceEEe
Confidence            11111111111110         0011111 01111  13457889999999999999999999998753 354443443


Q ss_pred             ---cCCCCCeEEEEEcC
Q psy8430         311 ---GHDEEPHILCVSSY  324 (361)
Q Consensus       311 ---~h~~~v~~~~~s~s  324 (361)
                         +...+|.++.++++
T Consensus       171 Rpgg~Nspiwsi~~~p~  187 (1081)
T KOG1538|consen  171 RPGGSNSPIWSICWNPS  187 (1081)
T ss_pred             CCCCCCCCceEEEecCC
Confidence               46667777666654

>KOG0322|consensus

Probab=99.27  E-value=1.3e-11  Score=99.82  Aligned_cols=124  Identities=19%  Similarity=0.175  Sum_probs=102.0

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--e--EEEEEeCCCCCeEEEEEecCCCEEEEEECCCcE
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--K--CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSV  227 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~--~--~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i  227 (361)
                      +.+.....|.++|.++.+.+.-..=++|+.+-.+..|+++..  .  ......-....|..+..-||++.++|++.|++|
T Consensus       196 kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~Ri  275 (323)
T KOG0322|consen  196 KVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRI  275 (323)
T ss_pred             ccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcE
Confidence            445556689999999999986555667888888889987533  2  122233345678899999999999999999999


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCC
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  301 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~  301 (361)
                      +||..++.                          .|+..+.-|++.|.+++|+|+...+++++.|+.|.+|++.
T Consensus       276 RVyswrtl--------------------------~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkLY  323 (323)
T KOG0322|consen  276 RVYSWRTL--------------------------NPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKLY  323 (323)
T ss_pred             EEEEeccC--------------------------CchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeecC
Confidence            99987765                          4888899999999999999999999999999999999863

>KOG0974|consensus

Probab=99.26  E-value=1e-10  Score=110.92  Aligned_cols=138  Identities=22%  Similarity=0.269  Sum_probs=112.8

Q ss_pred             EcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCC
Q psy8430         169 VRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLD  248 (361)
Q Consensus       169 ~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~  248 (361)
                      ++++.-++++|+.-+.|.+|+....+.-..+.+|.+.+.++.|+-+|.+++++|.|.++++|++.+...           
T Consensus       141 ~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~-----------  209 (967)
T KOG0974|consen  141 DSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREV-----------  209 (967)
T ss_pred             ccCcEEEEEeccccccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccc-----------
Confidence            556666999999999999999874333335789999999999999999999999999999999976632           


Q ss_pred             CCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCC-CeE--------E
Q psy8430         249 ESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE-PHI--------L  319 (361)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~-v~~--------~  319 (361)
                                    ......+|+..|+.+.|+|+  .+++++.|-+.++|+.. +..+..+.+|.+. +..        +
T Consensus       210 --------------~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~-~~~l~~y~~h~g~~iw~~~~~~~~~~  272 (967)
T KOG0974|consen  210 --------------LGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVN-GTQLEVYDEHSGKGIWKIAVPIGVII  272 (967)
T ss_pred             --------------cCcccccccceeEEEEeccc--eeEEeccceEEEEEecc-cceehhhhhhhhcceeEEEEcCCceE
Confidence                          22456789999999999988  99999999999999765 5556677777543 222        6


Q ss_pred             EEEcCCCcccCCCeEEEEcCCC
Q psy8430         320 CVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       320 ~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      .+|++     .||.+++|  |.
T Consensus       273 ~vT~g-----~Ds~lk~~--~l  287 (967)
T KOG0974|consen  273 KVTGG-----NDSTLKLW--DL  287 (967)
T ss_pred             EEeec-----cCcchhhh--hh
Confidence            77788     99999999  55

>KOG0974|consensus

Probab=99.26  E-value=5.3e-11  Score=112.79  Aligned_cols=130  Identities=21%  Similarity=0.311  Sum_probs=108.8

Q ss_pred             EeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE-EEeCCCCCeEEEEEecCCCEEEE
Q psy8430         142 SSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL-QYSGHSGSVNSVRFLPNKDLVLS  220 (361)
Q Consensus       142 ~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s  220 (361)
                      -+|++. .+...+ .+.||.+.|..+.|+.||.++++.|.|+++++|++++.+... +.-+|...|..++|.|.  .++|
T Consensus       158 ivW~~~-~dn~p~-~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t  233 (967)
T KOG0974|consen  158 IVWKPH-EDNKPI-RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIIT  233 (967)
T ss_pred             EEEecc-ccCCcc-eecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEE
Confidence            356655 333333 688999999999999999999999999999999999987655 66689999999999988  9999


Q ss_pred             EECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCC-CcEEEEEEcCCCCEEEEEeCCCcEEEee
Q psy8430         221 ASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHS-NVVIAADWLSDGEQVITASWDRVANLFD  299 (361)
Q Consensus       221 ~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~d~~v~iwd  299 (361)
                      ++.|.++++|+..-.                           ....+.+|. ..++.++.++....++|++.|+.+++||
T Consensus       234 ~gedctcrvW~~~~~---------------------------~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~  286 (967)
T KOG0974|consen  234 VGEDCTCRVWGVNGT---------------------------QLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWD  286 (967)
T ss_pred             eccceEEEEEecccc---------------------------eehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhh
Confidence            999999999965422                           233566675 4689999999999999999999999999


Q ss_pred             CCC
Q psy8430         300 VET  302 (361)
Q Consensus       300 ~~~  302 (361)
                      ...
T Consensus       287 l~~  289 (967)
T KOG0974|consen  287 LNG  289 (967)
T ss_pred             hhc
Confidence            763

>KOG1310|consensus

Probab=99.25  E-value=1.8e-11  Score=108.49  Aligned_cols=123  Identities=19%  Similarity=0.303  Sum_probs=98.6

Q ss_pred             EEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEE-EeCCCCcE
Q psy8430         196 VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKE-LLGHSNVV  274 (361)
Q Consensus       196 ~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v  274 (361)
                      ...+.||.+-|+|+.|+.+|.+|++|+.|-.+.|||.-..                          ++... -.||...|
T Consensus        43 E~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~--------------------------KllhsI~TgHtaNI   96 (758)
T KOG1310|consen   43 EAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEY--------------------------KLLHSISTGHTANI   96 (758)
T ss_pred             hhhhccccceecceeecCCCCEEeecCCcceEEeecchhc--------------------------ceeeeeecccccce
Confidence            3567899999999999999999999999999999997433                          23333 35899999


Q ss_pred             EEEEEcC--CCCEEEEEeCCCcEEEeeCCC----------CeEEEEeecCCCCCeE---------EEEEcCCCcccCCCe
Q psy8430         275 IAADWLS--DGEQVITASWDRVANLFDVET----------GTILQSLTGHDEEPHI---------LCVSSYYSKVSCDLF  333 (361)
Q Consensus       275 ~~~~~~~--~~~~l~s~~~d~~v~iwd~~~----------~~~~~~~~~h~~~v~~---------~~~s~s~~~v~~dg~  333 (361)
                      .++.|-|  +.+.+++|..|..|++||+..          -.....+.+|...|..         .+++++     .||+
T Consensus        97 FsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~Phtfwsas-----EDGt  171 (758)
T KOG1310|consen   97 FSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSAS-----EDGT  171 (758)
T ss_pred             eEEeeeccCCCeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEec-----CCcc
Confidence            9999998  567889999999999999984          2345566677766554         678888     9999


Q ss_pred             EEEEcCCCCCCCCcceeeeee
Q psy8430         334 QRIQHLDCGTSENPIHSVCVF  354 (361)
Q Consensus       334 i~iW~~d~~~~~~~~~~v~~~  354 (361)
                      |+-+  |+   |.|..|-...
T Consensus       172 irQy--Di---REph~c~p~~  187 (758)
T KOG1310|consen  172 IRQY--DI---REPHVCNPDE  187 (758)
T ss_pred             eeee--cc---cCCccCCccc
Confidence            9999  99   7766554433

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.23  E-value=6.7e-10  Score=102.58  Aligned_cols=79  Identities=18%  Similarity=0.176  Sum_probs=58.7

Q ss_pred             eEEeeccCCCeEEEEEcCCCCEEEEEeCC---CcEEEEeCCCCeE--EEEEeCCCCCeEEEEEecCCCEEEEEE-CCCcE
Q psy8430         154 IRSFSGHRDGVWDVAVRPGQPVLGSASAD---RTVRLWSTQTGKC--VLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKSV  227 (361)
Q Consensus       154 ~~~l~~h~~~V~~l~~~~~~~~l~s~s~d---~~i~~wd~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~~i  227 (361)
                      .+.+..|...+.+.+|+|||+.|+.++.+   ..|.+||+.+++.  +..+.+   ....++|+|+|+.|+.++ .+|.+
T Consensus       196 ~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g---~~~~~~wSPDG~~La~~~~~~g~~  272 (429)
T PRK01742        196 QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRG---HNGAPAFSPDGSRLAFASSKDGVL  272 (429)
T ss_pred             ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCC---ccCceeECCCCCEEEEEEecCCcE
Confidence            46677888899999999999999888754   3699999988753  333333   344689999999887764 68876


Q ss_pred             EEE--ecccc
Q psy8430         228 HIW--QAVIN  235 (361)
Q Consensus       228 ~lw--d~~~~  235 (361)
                      .||  |+.++
T Consensus       273 ~Iy~~d~~~~  282 (429)
T PRK01742        273 NIYVMGANGG  282 (429)
T ss_pred             EEEEEECCCC
Confidence            666  54433

>KOG1409|consensus

Probab=99.23  E-value=9.2e-11  Score=98.39  Aligned_cols=172  Identities=21%  Similarity=0.285  Sum_probs=123.9

Q ss_pred             eeeeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe-EEEEEeCCCCCeEEE
Q psy8430         131 NKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-CVLQYSGHSGSVNSV  209 (361)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~-~~~~~~~h~~~v~~v  209 (361)
                      ..+.+....-+....-....+.++.++.+|.+.|.+++|.|....|++|..|..+.+||+-..+ ....+.+|...|..+
T Consensus       167 ~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l  246 (404)
T KOG1409|consen  167 YAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQAL  246 (404)
T ss_pred             EEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhh
Confidence            6666666666666677778889999999999999999999999999999999999999996443 345677899999999


Q ss_pred             EEecCCCEEEEEECCCcEEEEeccccccccCCCCCC----------------------------------C---C---CC
Q psy8430         210 RFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDS----------------------------------D---L---DE  249 (361)
Q Consensus       210 ~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~----------------------------------~---~---~~  249 (361)
                      ...+-...+++++.||.|.+||.+........=..+                                  .   .   ..
T Consensus       247 ~~~~~t~~l~S~~edg~i~~w~mn~~r~etpewl~s~~cQ~c~qpffwn~~~m~~~k~~glr~h~crkcg~avc~~c~s~  326 (404)
T KOG1409|consen  247 SYAQHTRQLISCGEDGGIVVWNMNVKRVETPEWLDSDSCQKCNQPFFWNFRQMWDRKQLGLRQHHCRKCGKAVCGKCSSN  326 (404)
T ss_pred             hhhhhheeeeeccCCCeEEEEeccceeecCccccccchhhhhCchHHHHHHHHHhhhhhhhhhhhhhhhhhhcCcccccC
Confidence            999888999999999999999987543211100000                                  0   0   00


Q ss_pred             CC-CC---------------CCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC
Q psy8430         250 SK-EP---------------DESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET  302 (361)
Q Consensus       250 ~~-~~---------------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~  302 (361)
                      .. .+               .......++++.....-...|+++.+...-.+|+|++.|+.|+|||++.
T Consensus       327 ~~~~p~mg~e~~vR~~~~c~~~i~~~~~t~LA~phei~tgItamhlqetlglLvTsG~~Rvi~iwd~~~  395 (404)
T KOG1409|consen  327 RSSYPTMGFEFSVRVCDSCYPTIKDEERTPLAIPHEIKTGITAMHLQETLGLLVTSGTDRVIKIWDVRS  395 (404)
T ss_pred             ccccccccceeEEEEecccchhhhcCCCCccccccccccceeEEEhhhhccceeecCCceEEEEEechh
Confidence            00 00               0000111123333333345688888888888999999999999999874

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.21  E-value=1.6e-09  Score=100.14  Aligned_cols=166  Identities=16%  Similarity=0.178  Sum_probs=103.4

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEe-CCCcEEEE--eCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE-CCCcE
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSAS-ADRTVRLW--STQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKSV  227 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s-~d~~i~~w--d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~~i  227 (361)
                      +.+..+.+|   ...++|+|||+.|+.++ .+|.+.||  |+.++.. ..+..+...+....|+|+|+.++.++ .++..
T Consensus       241 ~~l~~~~g~---~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~  316 (429)
T PRK01742        241 KVVASFRGH---NGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTP-SQLTSGAGNNTEPSWSPDGQSILFTSDRSGSP  316 (429)
T ss_pred             EEEecCCCc---cCceeECCCCCEEEEEEecCCcEEEEEEECCCCCe-EeeccCCCCcCCEEECCCCCEEEEEECCCCCc
Confidence            444445554   34689999999887764 68876655  6655553 44555777788999999999876554 57888


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEE
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ  307 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~  307 (361)
                      .||++.....                         ....+ ++..  ....|+|+|++++.++.++ +.+||+.++....
T Consensus       317 ~I~~~~~~~~-------------------------~~~~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~  367 (429)
T PRK01742        317 QVYRMSASGG-------------------------GASLV-GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEV  367 (429)
T ss_pred             eEEEEECCCC-------------------------CeEEe-cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEE
Confidence            9997643210                         11112 3333  4578999999999888765 5569999887543


Q ss_pred             EeecCCCCCeE------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeeccccc
Q psy8430         308 SLTGHDEEPHI------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQS  359 (361)
Q Consensus       308 ~~~~h~~~v~~------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~  359 (361)
                      ....+...-..      +++.++     .+|.+++|.+...+    +..+..+.+|.+
T Consensus       368 lt~~~~~~~~~~sPdG~~i~~~s-----~~g~~~~l~~~~~~----G~~~~~l~~~~g  416 (429)
T PRK01742        368 LSSTFLDESPSISPNGIMIIYSS-----TQGLGKVLQLVSAD----GRFKARLPGSDG  416 (429)
T ss_pred             ecCCCCCCCceECCCCCEEEEEE-----cCCCceEEEEEECC----CCceEEccCCCC
Confidence            22222111111      444444     78888888322212    334666666655

>KOG1517|consensus

Probab=99.19  E-value=1.2e-09  Score=103.94  Aligned_cols=181  Identities=15%  Similarity=0.190  Sum_probs=123.9

Q ss_pred             eeeeeeccceeEEeeecCc---cceeeeEEeec---c----CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEE
Q psy8430         130 TNKLKVQTSKIVSSFKTSL---LSCYKIRSFSG---H----RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY  199 (361)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~---h----~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~  199 (361)
                      .-.+.++.+.++++|.+-.   .+.+++.-+.+   +    .+.=.-++|.....+|+++|.-..|+|||.+.......+
T Consensus      1124 aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~di 1203 (1387)
T KOG1517|consen 1124 ALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADI 1203 (1387)
T ss_pred             hheeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeec
Confidence            3455677777888777643   23344433322   1    222233568876667777777889999999988777766


Q ss_pred             e-CCCCCeEEEEEec-CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCc--EE
Q psy8430         200 S-GHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNV--VI  275 (361)
Q Consensus       200 ~-~h~~~v~~v~~~~-~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~  275 (361)
                      . +....|+++.-+. .|+.+++|..||.|++||.+..                       .....+...+.|...  |.
T Consensus      1204 P~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a-----------------------~~ds~v~~~R~h~~~~~Iv 1260 (1387)
T KOG1517|consen 1204 PYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMA-----------------------PPDSLVCVYREHNDVEPIV 1260 (1387)
T ss_pred             ccCCCccceeecccccCCceEEEeecCCceEEeecccC-----------------------CccccceeecccCCcccce
Confidence            5 3455666665443 5789999999999999998754                       122366777788877  99


Q ss_pred             EEEEcCCCCE-EEEEeCCCcEEEeeCCCCeEE--EEeecCC--C-CCeE--------EEEEcCCCcccCCCeEEEEcC
Q psy8430         276 AADWLSDGEQ-VITASWDRVANLFDVETGTIL--QSLTGHD--E-EPHI--------LCVSSYYSKVSCDLFQRIQHL  339 (361)
Q Consensus       276 ~~~~~~~~~~-l~s~~~d~~v~iwd~~~~~~~--~~~~~h~--~-~v~~--------~~~s~s~~~v~~dg~i~iW~~  339 (361)
                      .+.+.+.|-- |++|+.||.|++||+++....  .++..|-  + ..++        ++++|+     . +.|+||++
T Consensus      1261 ~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs-----~-q~ikIy~~ 1332 (1387)
T KOG1517|consen 1261 HLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGS-----A-QLIKIYSL 1332 (1387)
T ss_pred             eEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecC-----c-ceEEEEec
Confidence            9999986654 999999999999999973221  2222222  2 1333        788888     7 99999943

>KOG1064|consensus

Probab=99.18  E-value=7.6e-11  Score=117.23  Aligned_cols=173  Identities=15%  Similarity=0.207  Sum_probs=137.4

Q ss_pred             eeeeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEE
Q psy8430         131 NKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR  210 (361)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~  210 (361)
                      ..+.+..+..+..|.|+....-..-.-.|. +.|+.+.|+..|+.+..+..||.+.+|.+. .++...++.|.....+++
T Consensus      2222 ~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~-s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~s~qchnk~~~Df~ 2299 (2439)
T KOG1064|consen 2222 YYLTGSQDGSVRMFEWGHGQQVVCFRTAGN-SRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYTSWQCHNKALSDFR 2299 (2439)
T ss_pred             eEEecCCCceEEEEeccCCCeEEEeeccCc-chhhhhhhcccCCceeeeccCCceeecccC-CcceeccccCCcccccee
Confidence            445566677788888866544433333344 889999999999999999999999999986 677778888999999999


Q ss_pred             EecCCCEEEEEE---CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEE
Q psy8430         211 FLPNKDLVLSAS---GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI  287 (361)
Q Consensus       211 ~~~~~~~l~s~~---~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  287 (361)
                      |..  ..+++++   .++.+.+||.....                       ....+.  ..|.+.++.+++-|..+.|+
T Consensus      2300 Fi~--s~~~tag~s~d~~n~~lwDtl~~~-----------------------~~s~v~--~~H~~gaT~l~~~P~~qlli 2352 (2439)
T KOG1064|consen 2300 FIG--SLLATAGRSSDNRNVCLWDTLLPP-----------------------MNSLVH--TCHDGGATVLAYAPKHQLLI 2352 (2439)
T ss_pred             eee--hhhhccccCCCCCcccchhcccCc-----------------------ccceee--eecCCCceEEEEcCcceEEE
Confidence            975  5677764   46789999964321                       111222  78999999999999999999


Q ss_pred             EEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCCcccCCCeEEEEcCCC
Q psy8430         288 TASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       288 s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      +|+.+|.|++||++..+.+++++.-.  -...+++|+     ..|.++||  ++
T Consensus      2353 sggr~G~v~l~D~rqrql~h~~~~~~--~~~~f~~~s-----s~g~ikIw--~~ 2397 (2439)
T KOG1064|consen 2353 SGGRKGEVCLFDIRQRQLRHTFQALD--TREYFVTGS-----SEGNIKIW--RL 2397 (2439)
T ss_pred             ecCCcCcEEEeehHHHHHHHHhhhhh--hhheeeccC-----cccceEEE--Ec
Confidence            99999999999999999888887622  445899999     99999999  55

>KOG1517|consensus

Probab=99.17  E-value=8.9e-10  Score=104.88  Aligned_cols=148  Identities=14%  Similarity=0.193  Sum_probs=109.7

Q ss_pred             CCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCC---eEEEEEeCCCCC--eEEEEEecCCCE-EEEEECCCcEEEEecc
Q psy8430         161 RDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTG---KCVLQYSGHSGS--VNSVRFLPNKDL-VLSASGDKSVHIWQAV  233 (361)
Q Consensus       161 ~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~---~~~~~~~~h~~~--v~~v~~~~~~~~-l~s~~~d~~i~lwd~~  233 (361)
                      ..-|+++.-+- .|+.|++|-.||.|++||.+..   ..+..++.|...  |..+.+.+.|-. +++|+.||.|.+||++
T Consensus      1208 ~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR 1287 (1387)
T KOG1517|consen 1208 STLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLR 1287 (1387)
T ss_pred             CccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecc
Confidence            34566665443 5789999999999999998754   356778888887  999999987665 9999999999999998


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCC---CCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430         234 INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGH---SNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~  310 (361)
                      ....                        ........|   .+..+++..|+....+++|+. +.|.||++. |+.+..+.
T Consensus      1288 ~~~~------------------------e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~-G~~l~~~k 1341 (1387)
T KOG1517|consen 1288 MSSK------------------------ETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLS-GEQLNIIK 1341 (1387)
T ss_pred             cCcc------------------------cccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecC-hhhhcccc
Confidence            6411                        112222233   236899999999999999998 999999986 55554443


Q ss_pred             cCC-------CCCeE--------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         311 GHD-------EEPHI--------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       311 ~h~-------~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      .+.       +.+.+        +++.|+     .|..|.||  ..
T Consensus      1342 ~n~~F~~q~~gs~scL~FHP~~~llAaG~-----~Ds~V~iY--s~ 1380 (1387)
T KOG1517|consen 1342 YNPGFMGQRIGSVSCLAFHPHRLLLAAGS-----ADSTVSIY--SC 1380 (1387)
T ss_pred             cCcccccCcCCCcceeeecchhHhhhhcc-----CCceEEEe--ec
Confidence            222       22333        566677     99999999  65

>KOG1963|consensus

Probab=99.15  E-value=2.3e-09  Score=100.28  Aligned_cols=159  Identities=16%  Similarity=0.149  Sum_probs=118.2

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC--C--eEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccc
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT--G--KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI  234 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~--~--~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~  234 (361)
                      .|.-.++|.+++|+++++++|..||.|.+|.--.  +  .....+.-|...|.+++|+++|.+|++|+..|.+.+|.+.+
T Consensus       203 ~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T  282 (792)
T KOG1963|consen  203 HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLET  282 (792)
T ss_pred             hhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecC
Confidence            4777799999999999999999999999997433  2  23445667999999999999999999999999999999877


Q ss_pred             cccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCC
Q psy8430         235 NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE  314 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~  314 (361)
                      ++                           ..-+.--.++|..+.++||+.+.+....|+.|.+....+.....++.+-..
T Consensus       283 ~~---------------------------kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~  335 (792)
T KOG1963|consen  283 GK---------------------------KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKP  335 (792)
T ss_pred             CC---------------------------cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccC
Confidence            62                           222334567899999999999999999999999988766655555544322


Q ss_pred             C-----------CeEEEEEcC-CC--cccCCCeEEEEcCCCCCCCC
Q psy8430         315 E-----------PHILCVSSY-YS--KVSCDLFQRIQHLDCGTSEN  346 (361)
Q Consensus       315 ~-----------v~~~~~s~s-~~--~v~~dg~i~iW~~d~~~~~~  346 (361)
                      .           .+.+.+.+. ..  +=+..|.|.+|  |+-+-+.
T Consensus       336 ~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~y--dl~td~~  379 (792)
T KOG1963|consen  336 PTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFY--DLYTDST  379 (792)
T ss_pred             CCccccccccccceeEEEcCCCCceeecCCCceEEEE--eccccce
Confidence            2           111222221 11  11378899999  7744333

>KOG2139|consensus

Probab=99.12  E-value=4.4e-09  Score=89.10  Aligned_cols=137  Identities=21%  Similarity=0.295  Sum_probs=96.5

Q ss_pred             cCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCC----eE----------EEEEeCCCCCeEEEEEecCCCEEEEEEC-
Q psy8430         160 HRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTG----KC----------VLQYSGHSGSVNSVRFLPNKDLVLSASG-  223 (361)
Q Consensus       160 h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~----~~----------~~~~~~h~~~v~~v~~~~~~~~l~s~~~-  223 (361)
                      .+..|+|++|-|.+. -|+.|.. +-|++|.....    ..          +....+| .+|+++.|++||..+++++. 
T Consensus       139 sQrnvtclawRPlsaselavgCr-~gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~g  216 (445)
T KOG2139|consen  139 SQRNVTCLAWRPLSASELAVGCR-AGICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFG  216 (445)
T ss_pred             hhcceeEEEeccCCcceeeeeec-ceeEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccC
Confidence            357799999999655 5555554 56999987521    11          1223345 78999999999999999986 


Q ss_pred             CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC
Q psy8430         224 DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  303 (361)
Q Consensus       224 d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~  303 (361)
                      |..|.|||+.++..+                        ++.  .-.-+.++-+.|||||.+|++++.|+..++|.....
T Consensus       217 sssi~iWdpdtg~~~------------------------pL~--~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~  270 (445)
T KOG2139|consen  217 SSSIMIWDPDTGQKI------------------------PLI--PKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQS  270 (445)
T ss_pred             cceEEEEcCCCCCcc------------------------ccc--ccCCCceeeEEEcCCCCEEEEecccceeeeehhccc
Confidence            568999999877432                        222  123456788999999999999999999999966544


Q ss_pred             eEEEEeecCCCCCeEEEEEcC
Q psy8430         304 TILQSLTGHDEEPHILCVSSY  324 (361)
Q Consensus       304 ~~~~~~~~h~~~v~~~~~s~s  324 (361)
                      .....+...++.|..-++++.
T Consensus       271 wt~erw~lgsgrvqtacWspc  291 (445)
T KOG2139|consen  271 WTKERWILGSGRVQTACWSPC  291 (445)
T ss_pred             ceecceeccCCceeeeeecCC
Confidence            444445444556666444443

>KOG1587|consensus

Probab=99.12  E-value=3e-10  Score=105.18  Aligned_cols=125  Identities=21%  Similarity=0.349  Sum_probs=102.8

Q ss_pred             eEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC-CCeEEEEEeCCCCCeEEEEEecC-CCEEEEEECCCcEEEEe
Q psy8430         154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ-TGKCVLQYSGHSGSVNSVRFLPN-KDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       154 ~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~-~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~i~lwd  231 (361)
                      +..+..|.++|+++.++|-+..++.++.|.+++||... ...++..+..+...|++++|+|. ...|+++..||.+.+||
T Consensus       391 ~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWD  470 (555)
T KOG1587|consen  391 HSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWD  470 (555)
T ss_pred             cccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhh
Confidence            34566788999999999988766666669999999987 66778888888888999999994 56788899999999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET  302 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~  302 (361)
                      +.....                        .|+.....+....+.+.|+++|+.+++|...|.+.+|++..
T Consensus       471 Ll~~~~------------------------~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~  517 (555)
T KOG1587|consen  471 LLQDDE------------------------EPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE  517 (555)
T ss_pred             hhcccc------------------------CCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence            965422                        35555555577778889999999999999999999999863

>KOG0280|consensus

Probab=99.11  E-value=1.1e-09  Score=90.08  Aligned_cols=158  Identities=13%  Similarity=0.151  Sum_probs=109.0

Q ss_pred             cceeeeEEeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCC-CCeEEEE-EeCCCCCeEEEEEec-CCCEEEEEECC
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQ-TGKCVLQ-YSGHSGSVNSVRFLP-NKDLVLSASGD  224 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~-~~~~~~~-~~~h~~~v~~v~~~~-~~~~l~s~~~d  224 (361)
                      ...+.+++++.|.-..+.+.|+. +.+++.+||.|+.+..||++ .++.+.. .+.|...|.+|.-+| .+.+++||+.|
T Consensus       153 ~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYD  232 (339)
T KOG0280|consen  153 MVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYD  232 (339)
T ss_pred             eeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccc
Confidence            34456668899999999999987 44599999999999999998 3344433 456899999999887 57899999999


Q ss_pred             CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCC--CEEEEEeCCCcEEEeeCCC
Q psy8430         225 KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG--EQVITASWDRVANLFDVET  302 (361)
Q Consensus       225 ~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~s~~~d~~v~iwd~~~  302 (361)
                      -.|++||.++-.+                         |+..- .-.+.|+.+.++|.-  ..++++-. +-++|.++..
T Consensus       233 e~i~~~DtRnm~k-------------------------Pl~~~-~v~GGVWRi~~~p~~~~~lL~~CMh-~G~ki~~~~~  285 (339)
T KOG0280|consen  233 ECIRVLDTRNMGK-------------------------PLFKA-KVGGGVWRIKHHPEIFHRLLAACMH-NGAKILDSSD  285 (339)
T ss_pred             cceeeeehhcccC-------------------------ccccC-ccccceEEEEecchhhhHHHHHHHh-cCceEEEecc
Confidence            9999999984322                         22221 123789999999843  33444443 4456666653


Q ss_pred             C--e---EEEEeecCCCCCeE--------EEEEcCCCcccCCCeEE-EE
Q psy8430         303 G--T---ILQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQR-IQ  337 (361)
Q Consensus       303 ~--~---~~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~-iW  337 (361)
                      +  +   .....+.|.+-.+.        +++|++|    +|..++ +|
T Consensus       286 ~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsF----YDk~~~~~W  330 (339)
T KOG0280|consen  286 KVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCSF----YDKKIRQLW  330 (339)
T ss_pred             cccchheeeeccccccceeeccccccccceeeeeec----cccceeeee
Confidence            3  2   22333445443333        5777764    677755 88

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.11  E-value=1.1e-08  Score=94.78  Aligned_cols=127  Identities=16%  Similarity=0.160  Sum_probs=93.7

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCCEEEEEeC---CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEE-EEECCCc
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASA---DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKS  226 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~---d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~~  226 (361)
                      +...+.+..|...+.+.+|+|||+.|+..+.   +..|.+||+.+++.. .+..+.+.+...+|+|+|+.++ +.+.++.
T Consensus       191 g~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~la~~~~~~g~  269 (435)
T PRK05137        191 GANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRKVVMSLSQGGN  269 (435)
T ss_pred             CCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCEEEEEEecCCC
Confidence            4455667788899999999999998888764   468999999888653 3445667788999999998765 5566665


Q ss_pred             --EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC-CC--cEEEeeCC
Q psy8430         227 --VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-DR--VANLFDVE  301 (361)
Q Consensus       227 --i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~--~v~iwd~~  301 (361)
                        |.+||+.++                           ....+..+........|+|+|++++..+. +|  .|++||+.
T Consensus       270 ~~Iy~~d~~~~---------------------------~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~  322 (435)
T PRK05137        270 TDIYTMDLRSG---------------------------TTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNAD  322 (435)
T ss_pred             ceEEEEECCCC---------------------------ceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECC
Confidence              666677554                           23344445556677899999999987764 33  58888987


Q ss_pred             CCeE
Q psy8430         302 TGTI  305 (361)
Q Consensus       302 ~~~~  305 (361)
                      ++..
T Consensus       323 g~~~  326 (435)
T PRK05137        323 GSNP  326 (435)
T ss_pred             CCCe
Confidence            6654

>KOG4227|consensus

Probab=99.08  E-value=1.1e-08  Score=87.58  Aligned_cols=85  Identities=15%  Similarity=0.134  Sum_probs=72.2

Q ss_pred             eeeEEee-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeC--CCCCeEEEEEecCCCEEEEEECCCcEE
Q psy8430         152 YKIRSFS-GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG--HSGSVNSVRFLPNKDLVLSASGDKSVH  228 (361)
Q Consensus       152 ~~~~~l~-~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~--h~~~v~~v~~~~~~~~l~s~~~d~~i~  228 (361)
                      ++|.... .|...|.|++|+....++++|+.+++|.+-|+++.+.+..+..  ..+.|..+..+|-.+.|++.+.+|.|.
T Consensus        95 KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~  174 (609)
T KOG4227|consen   95 KPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVS  174 (609)
T ss_pred             CCceeccCccccceEEEEEccCCeeEecCCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEE
Confidence            4454443 3568999999999999999999999999999999988877752  235999999999999999999999999


Q ss_pred             EEeccccc
Q psy8430         229 IWQAVINW  236 (361)
Q Consensus       229 lwd~~~~~  236 (361)
                      +||++...
T Consensus       175 ~~D~Rd~~  182 (609)
T KOG4227|consen  175 FIDNRDRQ  182 (609)
T ss_pred             EEeccCCC
Confidence            99998653

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.07  E-value=1.2e-08  Score=94.47  Aligned_cols=127  Identities=16%  Similarity=0.198  Sum_probs=90.8

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCC---CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEE-EEECCC-
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD---RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDK-  225 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d---~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~-  225 (361)
                      +...+.+..|...+.+..|+|||+.|+.++.+   ..|.+||+.+++... +....+...+++|+|+|+.++ +.+.+| 
T Consensus       193 g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpDG~~l~~~~s~~g~  271 (433)
T PRK04922        193 GYNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPDGRRLALTLSRDGN  271 (433)
T ss_pred             CCCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCCCCEEEEEEeCCCC
Confidence            34455677788889999999999998887743   469999998876533 333445566889999998765 556666 


Q ss_pred             -cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC-CCc--EEEeeCC
Q psy8430         226 -SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-DRV--ANLFDVE  301 (361)
Q Consensus       226 -~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~~--v~iwd~~  301 (361)
                       .|.+||+.++                           ....+..+.......+|+|+|++++.++. +|.  |+++|+.
T Consensus       272 ~~Iy~~d~~~g---------------------------~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~  324 (433)
T PRK04922        272 PEIYVMDLGSR---------------------------QLTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAAS  324 (433)
T ss_pred             ceEEEEECCCC---------------------------CeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECC
Confidence             5888888655                           23334444445567899999999887764 444  7777877


Q ss_pred             CCeE
Q psy8430         302 TGTI  305 (361)
Q Consensus       302 ~~~~  305 (361)
                      +++.
T Consensus       325 ~g~~  328 (433)
T PRK04922        325 GGSA  328 (433)
T ss_pred             CCCe
Confidence            7654

>KOG2321|consensus

Probab=99.06  E-value=2.7e-09  Score=95.44  Aligned_cols=127  Identities=20%  Similarity=0.191  Sum_probs=84.4

Q ss_pred             EEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCC-----
Q psy8430         196 VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGH-----  270 (361)
Q Consensus       196 ~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  270 (361)
                      +..|....+.+++|..++...+|++|+.||.|..||.+....+....                    ....+..|     
T Consensus       168 L~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~--------------------~~~~v~s~pg~~~  227 (703)
T KOG2321|consen  168 LNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLD--------------------AASSVNSHPGGDA  227 (703)
T ss_pred             ccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeee--------------------cccccCCCccccc
Confidence            33344455788999999988899999999999999998764332111                    01111122     


Q ss_pred             CCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCe--EEEEEcC--CC-ccc-CCCeEEEEcCCCCCC
Q psy8430         271 SNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPH--ILCVSSY--YS-KVS-CDLFQRIQHLDCGTS  344 (361)
Q Consensus       271 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~--~~~~s~s--~~-~v~-~dg~i~iW~~d~~~~  344 (361)
                      ...|++++|+.+|-.+++|+.+|.|.|||+++.+++..- .|...+.  .+.+-..  .. -++ ....++||  |-.||
T Consensus       228 ~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~k-dh~~e~pi~~l~~~~~~~q~~v~S~Dk~~~kiW--d~~~G  304 (703)
T KOG2321|consen  228 APSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVK-DHGYELPIKKLDWQDTDQQNKVVSMDKRILKIW--DECTG  304 (703)
T ss_pred             cCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeec-ccCCccceeeecccccCCCceEEecchHHhhhc--ccccC
Confidence            235999999999999999999999999999998876543 3544433  3332111  01 112 34578999  66554


Q ss_pred             C
Q psy8430         345 E  345 (361)
Q Consensus       345 ~  345 (361)
                      .
T Consensus       305 k  305 (703)
T KOG2321|consen  305 K  305 (703)
T ss_pred             C
Confidence            3

>KOG2139|consensus

Probab=99.06  E-value=2.9e-09  Score=90.19  Aligned_cols=115  Identities=23%  Similarity=0.415  Sum_probs=87.9

Q ss_pred             eccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccc
Q psy8430         158 SGHRDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW  236 (361)
Q Consensus       158 ~~h~~~V~~l~~~~~~~~l~s~s~-d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~  236 (361)
                      .|| .+|+++.|++||..+++++. |..|.|||.+++..+.....-.+.+.-+.|+|++.+|+++.-|+..++|+....+
T Consensus       193 pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~w  271 (445)
T KOG2139|consen  193 PGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSW  271 (445)
T ss_pred             CCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhcccc
Confidence            456 78999999999999999886 5689999999987665544456788899999999999999999999999654322


Q ss_pred             cccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeC
Q psy8430         237 ECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV  300 (361)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~  300 (361)
                                               +...... ..+.|....|+|+|++|+.++. |.-++|.+
T Consensus       272 -------------------------t~erw~l-gsgrvqtacWspcGsfLLf~~s-gsp~lysl  308 (445)
T KOG2139|consen  272 -------------------------TKERWIL-GSGRVQTACWSPCGSFLLFACS-GSPRLYSL  308 (445)
T ss_pred             -------------------------eecceec-cCCceeeeeecCCCCEEEEEEc-CCceEEEE
Confidence                                     2333333 3448999999999998876654 33334443

>KOG4547|consensus

Probab=99.06  E-value=9.1e-09  Score=92.40  Aligned_cols=138  Identities=20%  Similarity=0.223  Sum_probs=115.9

Q ss_pred             CCCEEEEEeCCCcEEEEeCCCCeEEEEEe--CCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCC
Q psy8430         172 GQPVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDE  249 (361)
Q Consensus       172 ~~~~l~s~s~d~~i~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~  249 (361)
                      +-..++-|...|.|.++++..|+....+.  .|.+.|+++.++.+-..|.+++.|+.+..|+....              
T Consensus        69 ~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~--------------  134 (541)
T KOG4547|consen   69 DTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEK--------------  134 (541)
T ss_pred             CceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccc--------------
Confidence            34478888999999999999998777775  69999999999999899999999999999987654              


Q ss_pred             CCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcC-----
Q psy8430         250 SKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSY-----  324 (361)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s-----  324 (361)
                                  ..+..+.+....+.+++++|||..+++++  +.|.+||+++++.+.++.+|.++|.++.++..     
T Consensus       135 ------------~~~~~~~~~~~~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~  200 (541)
T KOG4547|consen  135 ------------VIIRIWKEQKPLVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGII  200 (541)
T ss_pred             ------------eeeeeeccCCCccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccc
Confidence                        25566677788899999999999999987  78999999999999999999999999777665     


Q ss_pred             CCcc----cCCCeEEEE
Q psy8430         325 YSKV----SCDLFQRIQ  337 (361)
Q Consensus       325 ~~~v----~~dg~i~iW  337 (361)
                      +.+|    ..+..+.+|
T Consensus       201 G~~vLssa~~~r~i~~w  217 (541)
T KOG4547|consen  201 GKYVLSSAAAERGITVW  217 (541)
T ss_pred             cceeeeccccccceeEE
Confidence            1222    245566778

>KOG0771|consensus

Probab=99.06  E-value=1.3e-09  Score=93.85  Aligned_cols=139  Identities=22%  Similarity=0.243  Sum_probs=107.1

Q ss_pred             eccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEE----------------
Q psy8430         135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ----------------  198 (361)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~----------------  198 (361)
                      +.++..+++|.++..  ..+..+..|.+.|.++.|+|||.+|++-+.| ..+||+.++|.++..                
T Consensus       162 gg~dg~lRv~~~Ps~--~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~  238 (398)
T KOG0771|consen  162 GGTDGTLRVWEWPSM--LTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPFSKDEMFSSCRFS  238 (398)
T ss_pred             ccccceEEEEecCcc--hhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCcccchhhhhceec
Confidence            445566777776543  3345566899999999999999999999999 999999987721100                


Q ss_pred             ---------------------------EeC-----------CCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccC
Q psy8430         199 ---------------------------YSG-----------HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLN  240 (361)
Q Consensus       199 ---------------------------~~~-----------h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~  240 (361)
                                                 +.+           -...|.+++.+++|++++.|+.||.|.|++..+-+    
T Consensus       239 ~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq----  314 (398)
T KOG0771|consen  239 VDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQ----  314 (398)
T ss_pred             ccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceee----
Confidence                                       000           12478899999999999999999999999875432    


Q ss_pred             CCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCC
Q psy8430         241 NDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  301 (361)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~  301 (361)
                                           .....-..|...|+.+.|+|+.+++++.+.|..+++.-+.
T Consensus       315 ---------------------~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~  354 (398)
T KOG0771|consen  315 ---------------------RLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLA  354 (398)
T ss_pred             ---------------------eeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEe
Confidence                                 1233345799999999999999999999999998887654

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.05  E-value=8.2e-08  Score=88.63  Aligned_cols=117  Identities=15%  Similarity=0.119  Sum_probs=80.0

Q ss_pred             CCeEEEEEcCCCCEEEEE-eCCC--cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC-CCcEEEE--ecccc
Q psy8430         162 DGVWDVAVRPGQPVLGSA-SADR--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DKSVHIW--QAVIN  235 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~-s~d~--~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~~i~lw--d~~~~  235 (361)
                      +.+....|+|||+.|+.. +.++  .|.+||+.+++.... ..+...+....|+|+|+.|+.++. ++...||  |+.++
T Consensus       243 ~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~l-t~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g  321 (429)
T PRK03629        243 RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQV-TDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGG  321 (429)
T ss_pred             CCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEc-cCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCC
Confidence            345568999999977754 4454  588999988865543 334567788999999998877665 4555565  44332


Q ss_pred             ccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC---CcEEEeeCCCCeEE
Q psy8430         236 WECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD---RVANLFDVETGTIL  306 (361)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~v~iwd~~~~~~~  306 (361)
                                                 ....+..+........|+|+|++++..+.+   ..|.+||+.++...
T Consensus       322 ---------------------------~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~  368 (429)
T PRK03629        322 ---------------------------APQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ  368 (429)
T ss_pred             ---------------------------CeEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE
Confidence                                       122333334445678899999999876654   34888999887643

>KOG3881|consensus

Probab=99.05  E-value=2e-09  Score=91.98  Aligned_cols=136  Identities=13%  Similarity=0.156  Sum_probs=111.6

Q ss_pred             CeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCC-eEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecccccccc
Q psy8430         163 GVWDVAVRPG--QPVLGSASADRTVRLWSTQTG-KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECL  239 (361)
Q Consensus       163 ~V~~l~~~~~--~~~l~s~s~d~~i~~wd~~~~-~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~  239 (361)
                      +++++.|-+.  ...|+++..-+.+++||.+.+ +++.+|.--..++.++...|+++.+++|..-|.+..||++.+..  
T Consensus       204 W~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl--  281 (412)
T KOG3881|consen  204 WITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKL--  281 (412)
T ss_pred             eeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCcee--
Confidence            4566778886  779999999999999999877 67888887889999999999999999999999999999987632  


Q ss_pred             CCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEE
Q psy8430         240 NNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHIL  319 (361)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~  319 (361)
                                             ....+.+-.+.++++..+|.++++++++-|+.|+|+|+.+.+.+..... ...++.+
T Consensus       282 -----------------------~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvYv-Ks~lt~i  337 (412)
T KOG3881|consen  282 -----------------------LGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVYV-KSRLTFI  337 (412)
T ss_pred             -----------------------eccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhhhh-hccccEE
Confidence                                   3334677889999999999999999999999999999999766654432 2233445


Q ss_pred             EEEcC
Q psy8430         320 CVSSY  324 (361)
Q Consensus       320 ~~s~s  324 (361)
                      ++...
T Consensus       338 l~~~~  342 (412)
T KOG3881|consen  338 LLRDD  342 (412)
T ss_pred             EecCC
Confidence            55443

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.05  E-value=2.7e-08  Score=91.85  Aligned_cols=124  Identities=10%  Similarity=0.103  Sum_probs=85.4

Q ss_pred             eEEeeccCCCeEEEEEcCCCCEEEEEeC---CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEE-ECCC--cE
Q psy8430         154 IRSFSGHRDGVWDVAVRPGQPVLGSASA---DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA-SGDK--SV  227 (361)
Q Consensus       154 ~~~l~~h~~~V~~l~~~~~~~~l~s~s~---d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~-~~d~--~i  227 (361)
                      .+.+..+...+.+.+|+|||+.|+..+.   +..|.+|++.+|+.... ....+.+..++|+|+|+.|+.. +.+|  .|
T Consensus       191 ~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l-~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I  269 (429)
T PRK03629        191 QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV-ASFPRHNGAPAFSPDGSKLAFALSKTGSLNL  269 (429)
T ss_pred             CEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEc-cCCCCCcCCeEECCCCCEEEEEEcCCCCcEE
Confidence            3445567788999999999998886543   45799999988854332 2233345578999999987754 4455  48


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC-Cc--EEEeeCCCCe
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-RV--ANLFDVETGT  304 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-~~--v~iwd~~~~~  304 (361)
                      .+||+.++                           ....+..+...+....|+|+|+.|+.++.+ +.  |+++|+.++.
T Consensus       270 ~~~d~~tg---------------------------~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~  322 (429)
T PRK03629        270 YVMDLASG---------------------------QIRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGA  322 (429)
T ss_pred             EEEECCCC---------------------------CEEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCC
Confidence            88888654                           223343444567788999999999877754 34  5555777665


Q ss_pred             E
Q psy8430         305 I  305 (361)
Q Consensus       305 ~  305 (361)
                      .
T Consensus       323 ~  323 (429)
T PRK03629        323 P  323 (429)
T ss_pred             e
Confidence            4

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.05  E-value=2.2e-08  Score=92.45  Aligned_cols=129  Identities=16%  Similarity=0.187  Sum_probs=88.8

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCC---CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEE-EEECCC
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD---RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDK  225 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d---~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~  225 (361)
                      ++...+.+..+...+.+.+|+|||+.|+..+.+   ..|.+||+.+++... +....+.+.+.+|+|+|+.++ +.+.+|
T Consensus       184 dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG~~la~~~~~~g  262 (427)
T PRK02889        184 DGQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDGRTLAVALSRDG  262 (427)
T ss_pred             CCCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEEccCC
Confidence            344445666788899999999999988877653   359999999886543 333445667899999999876 567788


Q ss_pred             cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEee--CCC
Q psy8430         226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-DRVANLFD--VET  302 (361)
Q Consensus       226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd--~~~  302 (361)
                      ...||.+....                         .....+..+........|+|||++++..+. ++...+|.  +.+
T Consensus       263 ~~~Iy~~d~~~-------------------------~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~  317 (427)
T PRK02889        263 NSQIYTVNADG-------------------------SGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASG  317 (427)
T ss_pred             CceEEEEECCC-------------------------CCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCC
Confidence            87777653210                         123344444455667789999999887654 45555664  455


Q ss_pred             Ce
Q psy8430         303 GT  304 (361)
Q Consensus       303 ~~  304 (361)
                      +.
T Consensus       318 g~  319 (427)
T PRK02889        318 GA  319 (427)
T ss_pred             Cc
Confidence            54

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=99.04  E-value=1.1e-09  Score=64.28  Aligned_cols=39  Identities=33%  Similarity=0.617  Sum_probs=37.1

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWS  189 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd  189 (361)
                      +++++++.+|.+.|++++|+|++.+|++|+.|++|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            467899999999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG2321|consensus

Probab=99.04  E-value=3.8e-09  Score=94.48  Aligned_cols=150  Identities=18%  Similarity=0.273  Sum_probs=112.6

Q ss_pred             ecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe------CCCC-----CeEEEEEec
Q psy8430         145 KTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS------GHSG-----SVNSVRFLP  213 (361)
Q Consensus       145 ~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~------~h~~-----~v~~v~~~~  213 (361)
                      ......+..+..|....+.++++..++-..+|++|+.||.|-.||.+....+..+.      .|.+     .|+++.|+.
T Consensus       159 RlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d  238 (703)
T KOG2321|consen  159 RLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRD  238 (703)
T ss_pred             EEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecC
Confidence            33446677788888888999999999988899999999999999998765544443      2333     499999998


Q ss_pred             CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC--CCEEEEEeC
Q psy8430         214 NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASW  291 (361)
Q Consensus       214 ~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~  291 (361)
                      +|-.++.|..+|.+.|||+++..+                         ....-.+..-+|..+.|.+.  +..+++. .
T Consensus       239 ~gL~~aVGts~G~v~iyDLRa~~p-------------------------l~~kdh~~e~pi~~l~~~~~~~q~~v~S~-D  292 (703)
T KOG2321|consen  239 DGLHVAVGTSTGSVLIYDLRASKP-------------------------LLVKDHGYELPIKKLDWQDTDQQNKVVSM-D  292 (703)
T ss_pred             CceeEEeeccCCcEEEEEcccCCc-------------------------eeecccCCccceeeecccccCCCceEEec-c
Confidence            899999999999999999987632                         12223345568889999775  3444444 3


Q ss_pred             CCcEEEeeCCCCeEEEEeecCCCCCeEEEE
Q psy8430         292 DRVANLFDVETGTILQSLTGHDEEPHILCV  321 (361)
Q Consensus       292 d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~  321 (361)
                      ...++|||-.+|+....+.... .+..+|+
T Consensus       293 k~~~kiWd~~~Gk~~asiEpt~-~lND~C~  321 (703)
T KOG2321|consen  293 KRILKIWDECTGKPMASIEPTS-DLNDFCF  321 (703)
T ss_pred             hHHhhhcccccCCceeeccccC-CcCceee
Confidence            4779999999999988876433 3444333

>KOG2111|consensus

Probab=99.04  E-value=1.3e-08  Score=84.89  Aligned_cols=103  Identities=14%  Similarity=0.140  Sum_probs=84.0

Q ss_pred             CEEEE-EeCCCcEEEEeCCCCeE--EEEEeCCCCCeEEEEEecCCCEEEEEECCCc-EEEEeccccccccCCCCCCCCCC
Q psy8430         174 PVLGS-ASADRTVRLWSTQTGKC--VLQYSGHSGSVNSVRFLPNKDLVLSASGDKS-VHIWQAVINWECLNNDNDSDLDE  249 (361)
Q Consensus       174 ~~l~s-~s~d~~i~~wd~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~-i~lwd~~~~~~~~~~~~~~~~~~  249 (361)
                      .+||. |-.-|.|.|-|+...+.  ...+..|.+.|.|++.+.+|.++||+|..|+ |+|||..++.             
T Consensus       149 ~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~-------------  215 (346)
T KOG2111|consen  149 SLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGT-------------  215 (346)
T ss_pred             eEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCc-------------
Confidence            34443 44468999999876544  3677899999999999999999999999997 7999998773             


Q ss_pred             CCCCCCCceecccccEEEeC--CCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC
Q psy8430         250 SKEPDESSITLRTPVKELLG--HSNVVIAADWLSDGEQVITASWDRVANLFDVET  302 (361)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~  302 (361)
                                   .+..++-  ....+++++|||++.+|+++|..|+++||.++.
T Consensus       216 -------------~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~  257 (346)
T KOG2111|consen  216 -------------LLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD  257 (346)
T ss_pred             -------------EeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence                         4444442  346799999999999999999999999998874

>KOG4547|consensus

Probab=99.04  E-value=1.2e-08  Score=91.61  Aligned_cols=160  Identities=14%  Similarity=0.138  Sum_probs=125.0

Q ss_pred             cCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeC---CCCCeEEEEEe------c--------------CCCEEEEEECCCc
Q psy8430         170 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSG---HSGSVNSVRFL------P--------------NKDLVLSASGDKS  226 (361)
Q Consensus       170 ~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~---h~~~v~~v~~~------~--------------~~~~l~s~~~d~~  226 (361)
                      +|.+.++|....||.+++||...++....|..   -.+...+..|.      |              +...++-|...|.
T Consensus         2 ~~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~   81 (541)
T KOG4547|consen    2 PPALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGS   81 (541)
T ss_pred             CchhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCcc
Confidence            34566999999999999999998877666642   23445555553      2              2234666777889


Q ss_pred             EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE--eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCe
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL--LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT  304 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~  304 (361)
                      |.++++..+.                          ....+  .+|.+.|.++.++.+-..|++++.|..+..|+...+.
T Consensus        82 v~~ys~~~g~--------------------------it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~  135 (541)
T KOG4547|consen   82 VLLYSVAGGE--------------------------ITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKV  135 (541)
T ss_pred             EEEEEecCCe--------------------------EEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccce
Confidence            9999876552                          22223  3688999999999999999999999999999999999


Q ss_pred             EEEEeecCCCCCeEEEEEcCC-CcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         305 ILQSLTGHDEEPHILCVSSYY-SKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       305 ~~~~~~~h~~~v~~~~~s~s~-~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      .++.+.+....+.+++.++.+ +.+...+.|++|  |+   .. ...+..|.||.++|
T Consensus       136 ~~~~~~~~~~~~~sl~is~D~~~l~~as~~ik~~--~~---~~-kevv~~ftgh~s~v  187 (541)
T KOG4547|consen  136 IIRIWKEQKPLVSSLCISPDGKILLTASRQIKVL--DI---ET-KEVVITFTGHGSPV  187 (541)
T ss_pred             eeeeeccCCCccceEEEcCCCCEEEeccceEEEE--Ec---cC-ceEEEEecCCCcce
Confidence            999999988888888888873 345678999999  77   33 67799999999875

>KOG1524|consensus

Probab=99.03  E-value=1.6e-09  Score=96.08  Aligned_cols=131  Identities=17%  Similarity=0.247  Sum_probs=101.0

Q ss_pred             EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCC
Q psy8430         175 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPD  254 (361)
Q Consensus       175 ~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~  254 (361)
                      .|+.++.||.+.+-+- .++.......|.+.|.+-.|+|+|.-|++++.||.|++|.-. +                   
T Consensus        77 ~~~i~s~DGkf~il~k-~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrs-G-------------------  135 (737)
T KOG1524|consen   77 TLLICSNDGRFVILNK-SARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRS-G-------------------  135 (737)
T ss_pred             eEEEEcCCceEEEecc-cchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEecc-c-------------------
Confidence            5777777888777663 466666677899999999999999999999999999999642 1                   


Q ss_pred             CCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE--------EEEEcCCC
Q psy8430         255 ESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI--------LCVSSYYS  326 (361)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~--------~~~s~s~~  326 (361)
                          ..   -.++.....+|++++|.|+..-++-+.. +.+.|=-+.....+-.|.+|.+.|.+        +++||+  
T Consensus       136 ----ML---RStl~Q~~~~v~c~~W~p~S~~vl~c~g-~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgG--  205 (737)
T KOG1524|consen  136 ----ML---RSTVVQNEESIRCARWAPNSNSIVFCQG-GHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGG--  205 (737)
T ss_pred             ----hH---HHHHhhcCceeEEEEECCCCCceEEecC-CeEEEeecccccceeEEeccCcEEEEeecCccccceeecC--
Confidence                11   1122334668999999998876665543 45666666666677889999998877        888999  


Q ss_pred             cccCCCeEEEEcCCC
Q psy8430         327 KVSCDLFQRIQHLDC  341 (361)
Q Consensus       327 ~v~~dg~i~iW~~d~  341 (361)
                         .|-..+||  |.
T Consensus       206 ---ED~kfKvW--D~  215 (737)
T KOG1524|consen  206 ---EDFRFKIW--DA  215 (737)
T ss_pred             ---CceeEEee--cc
Confidence               99999999  75

>KOG3914|consensus

Probab=99.03  E-value=3.7e-09  Score=90.70  Aligned_cols=149  Identities=17%  Similarity=0.168  Sum_probs=102.5

Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe----EEEEEeCCCCCeEEEEEecCCCEEEEEE---CCCcEEEEeccccc
Q psy8430         164 VWDVAVRPGQPVLGSASADRTVRLWSTQTGK----CVLQYSGHSGSVNSVRFLPNKDLVLSAS---GDKSVHIWQAVINW  236 (361)
Q Consensus       164 V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~----~~~~~~~h~~~v~~v~~~~~~~~l~s~~---~d~~i~lwd~~~~~  236 (361)
                      +..+..++.+.++|.+..+....++++....    .+..+. -...-..+.|..+......+.   ....+.+|.+..+ 
T Consensus        65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~-v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~-  142 (390)
T KOG3914|consen   65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSC-VPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSG-  142 (390)
T ss_pred             ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEee-cccCcceeeeeeccceEEEEeecCCceeeeeeccccc-
Confidence            4455677888888888887777677665432    222222 223334555555544444443   3445555544322 


Q ss_pred             cccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEe-ecCCCC
Q psy8430         237 ECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL-TGHDEE  315 (361)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~-~~h~~~  315 (361)
                                                +...+.||-+.++.++|+||+++++++..|..|++-....-..+..| .||...
T Consensus       143 --------------------------~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eF  196 (390)
T KOG3914|consen  143 --------------------------RCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEF  196 (390)
T ss_pred             --------------------------CcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhh
Confidence                                      44556689999999999999999999999999999877765556655 468888


Q ss_pred             CeE-------EEEEcCCCcccCCCeEEEEcCCCCCCCCc
Q psy8430         316 PHI-------LCVSSYYSKVSCDLFQRIQHLDCGTSENP  347 (361)
Q Consensus       316 v~~-------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~  347 (361)
                      |..       .++|++     .|++|++|  |..+++.+
T Consensus       197 VS~isl~~~~~LlS~s-----GD~tlr~W--d~~sgk~L  228 (390)
T KOG3914|consen  197 VSTISLTDNYLLLSGS-----GDKTLRLW--DITSGKLL  228 (390)
T ss_pred             eeeeeeccCceeeecC-----CCCcEEEE--ecccCCcc
Confidence            877       568888     99999999  99666663

>KOG1272|consensus

Probab=99.00  E-value=1.3e-09  Score=94.91  Aligned_cols=147  Identities=12%  Similarity=0.017  Sum_probs=113.3

Q ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEE---------------------------------------EeCCCCC
Q psy8430         165 WDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ---------------------------------------YSGHSGS  205 (361)
Q Consensus       165 ~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~---------------------------------------~~~h~~~  205 (361)
                      +.+.++.+|..++.|+.-|.+-.+|+.+++....                                       ++ ....
T Consensus       133 Y~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~Etv~Dv~~LHneq~~AVAQK~y~yvYD~~GtElHClk-~~~~  211 (545)
T KOG1272|consen  133 YHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINVMETVRDVTFLHNEQFFAVAQKKYVYVYDNNGTELHCLK-RHIR  211 (545)
T ss_pred             eeeeecCCccEEEecCCccceeeeecccceeeeeeehhhhhhhhhhhcchHHHHhhhhceEEEecCCCcEEeehh-hcCc
Confidence            4566777777777777777777777766544332                                       22 2245


Q ss_pred             eEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCE
Q psy8430         206 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQ  285 (361)
Q Consensus       206 v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  285 (361)
                      |..+.|-|.--+|++++..|.++.-|+.+++                          .+..+....+.+..++-+|-...
T Consensus       212 v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~Gk--------------------------lVa~~~t~~G~~~vm~qNP~NaV  265 (545)
T KOG1272|consen  212 VARLEFLPYHFLLVAASEAGFLKYQDVSTGK--------------------------LVASIRTGAGRTDVMKQNPYNAV  265 (545)
T ss_pred             hhhhcccchhheeeecccCCceEEEeechhh--------------------------hhHHHHccCCccchhhcCCccce
Confidence            6667777766677788888888888887763                          45555566778888999998889


Q ss_pred             EEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCC
Q psy8430         286 VITASWDRVANLFDVETGTILQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSE  345 (361)
Q Consensus       286 l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~  345 (361)
                      +-+|...|+|.+|...+.+++..+.+|.++|.+        +++|.+     .|..++||  |+++..
T Consensus       266 ih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG-----~Dr~~kIW--DlR~~~  326 (545)
T KOG1272|consen  266 IHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTG-----LDRKVKIW--DLRNFY  326 (545)
T ss_pred             EEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecc-----cccceeEe--eecccc
Confidence            999999999999999999999999999999998        667777     99999999  994433

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.00  E-value=3e-07  Score=82.14  Aligned_cols=176  Identities=11%  Similarity=0.065  Sum_probs=108.1

Q ss_pred             eeEEeeecCc-cceeeeEEeeccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCC-CCeE--EEEEeCCCCCeEEEEEec
Q psy8430         139 KIVSSFKTSL-LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS-ADRTVRLWSTQ-TGKC--VLQYSGHSGSVNSVRFLP  213 (361)
Q Consensus       139 ~~~~~~~~~~-~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s-~d~~i~~wd~~-~~~~--~~~~~~h~~~v~~v~~~~  213 (361)
                      .-+..|.... .....+.++.. .+....++++|++++|++++ .++.|.+|++. ++..  +.... ..+....++|+|
T Consensus        12 ~~I~~~~~~~~g~l~~~~~~~~-~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p~~i~~~~   89 (330)
T PRK11028         12 QQIHVWNLNHEGALTLLQVVDV-PGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGSPTHISTDH   89 (330)
T ss_pred             CCEEEEEECCCCceeeeeEEec-CCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCCceEEEECC
Confidence            3344444432 23345666653 45677899999999887664 57899999996 3432  22222 344678899999


Q ss_pred             CCCEEEEEEC-CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe-C
Q psy8430         214 NKDLVLSASG-DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-W  291 (361)
Q Consensus       214 ~~~~l~s~~~-d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~  291 (361)
                      +++.+++++. ++.|.+|++.+....                      ......+. +......++++|+|+++++++ .
T Consensus        90 ~g~~l~v~~~~~~~v~v~~~~~~g~~----------------------~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~  146 (330)
T PRK11028         90 QGRFLFSASYNANCVSVSPLDKDGIP----------------------VAPIQIIE-GLEGCHSANIDPDNRTLWVPCLK  146 (330)
T ss_pred             CCCEEEEEEcCCCeEEEEEECCCCCC----------------------CCceeecc-CCCcccEeEeCCCCCEEEEeeCC
Confidence            9998888764 789999998532110                      00111221 223456788999999986655 5


Q ss_pred             CCcEEEeeCCCCeEEE-------EeecCCCCCeEEEEEcC--CCccc--CCCeEEEEcCC
Q psy8430         292 DRVANLFDVETGTILQ-------SLTGHDEEPHILCVSSY--YSKVS--CDLFQRIQHLD  340 (361)
Q Consensus       292 d~~v~iwd~~~~~~~~-------~~~~h~~~v~~~~~s~s--~~~v~--~dg~i~iW~~d  340 (361)
                      ++.|.+||+.+...+.       ..... .....+.++++  +.+|+  .++.|.+|+++
T Consensus       147 ~~~v~v~d~~~~g~l~~~~~~~~~~~~g-~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~  205 (330)
T PRK11028        147 EDRIRLFTLSDDGHLVAQEPAEVTTVEG-AGPRHMVFHPNQQYAYCVNELNSSVDVWQLK  205 (330)
T ss_pred             CCEEEEEEECCCCcccccCCCceecCCC-CCCceEEECCCCCEEEEEecCCCEEEEEEEe
Confidence            6999999998633221       11111 22333444544  22332  48999999544

>KOG0309|consensus

Probab=98.99  E-value=2e-09  Score=98.85  Aligned_cols=129  Identities=22%  Similarity=0.354  Sum_probs=104.9

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCC-eEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcE
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTG-KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSV  227 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~-~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i  227 (361)
                      .......+.||..+|+.+-|+|... .+++++.|..+..||+++. .++..+..-......|+|+-....+.+.+....|
T Consensus       103 ~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i  182 (1081)
T KOG0309|consen  103 SNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDI  182 (1081)
T ss_pred             ccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCce
Confidence            3445556779999999999999654 8999999999999999876 5666666667778889998765566666778889


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEeeCCCC
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETG  303 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~  303 (361)
                      .+||++.+.                         .+...+.+|...|+++.|+. ....+.+++.||+|+.||....
T Consensus       183 ~vwd~r~gs-------------------------~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kS  234 (1081)
T KOG0309|consen  183 FVWDLRKGS-------------------------TPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKS  234 (1081)
T ss_pred             EEEeccCCC-------------------------cceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccccc
Confidence            999998773                         37788888999999999876 4456788999999999998743

>KOG1963|consensus

Probab=98.99  E-value=3.1e-08  Score=92.86  Aligned_cols=92  Identities=17%  Similarity=0.203  Sum_probs=77.3

Q ss_pred             EEeeecCc--cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEE
Q psy8430         141 VSSFKTSL--LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV  218 (361)
Q Consensus       141 ~~~~~~~~--~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l  218 (361)
                      +-+|..-.  ......+.+..|...|.++.|+++|.+|+|||..|.+-+|.+.+++ ..-++.-.++|..+.++|++.+.
T Consensus       229 I~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kqfLPRLgs~I~~i~vS~ds~~~  307 (792)
T KOG1963|consen  229 ILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQFLPRLGSPILHIVVSPDSDLY  307 (792)
T ss_pred             EEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC-cccccccCCeeEEEEEcCCCCeE
Confidence            44444433  4445566778999999999999999999999999999999999988 44556678999999999999999


Q ss_pred             EEEECCCcEEEEecc
Q psy8430         219 LSASGDKSVHIWQAV  233 (361)
Q Consensus       219 ~s~~~d~~i~lwd~~  233 (361)
                      +....|..|.+-...
T Consensus       308 sl~~~DNqI~li~~~  322 (792)
T KOG1963|consen  308 SLVLEDNQIHLIKAS  322 (792)
T ss_pred             EEEecCceEEEEecc
Confidence            999999999988654

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=98.98  E-value=4.2e-07  Score=81.23  Aligned_cols=157  Identities=7%  Similarity=0.032  Sum_probs=98.3

Q ss_pred             CCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCC-C---eEEEEEeCCCCCeEEEEEecCCCEEEEEE-CCCcEEEEecccc
Q psy8430         162 DGVWDVAVRPGQPVLGSASA-DRTVRLWSTQT-G---KCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKSVHIWQAVIN  235 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~-d~~i~~wd~~~-~---~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~~i~lwd~~~~  235 (361)
                      +....++|+|++++|++++. ++.|.+|++.+ +   ..+..+. +.....+++++|+++++++++ .++.|.+||+.+.
T Consensus        80 ~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~  158 (330)
T PRK11028         80 GSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDD  158 (330)
T ss_pred             CCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCC
Confidence            45678999999998888764 88999999964 3   2333333 334567889999999876554 5689999998753


Q ss_pred             ccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEeeCCC--C--eEEEEee
Q psy8430         236 WECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-DRVANLFDVET--G--TILQSLT  310 (361)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd~~~--~--~~~~~~~  310 (361)
                      ..+...                   ........ .......+.|+|+|+++++++. ++.|.+||+..  +  +.+.++.
T Consensus       159 g~l~~~-------------------~~~~~~~~-~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~  218 (330)
T PRK11028        159 GHLVAQ-------------------EPAEVTTV-EGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLD  218 (330)
T ss_pred             Cccccc-------------------CCCceecC-CCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEe
Confidence            211000                   00001111 1234567899999999988876 89999999973  3  3344443


Q ss_pred             cCCC----C--CeEEEEEcC--CCccc--CCCeEEEEcC
Q psy8430         311 GHDE----E--PHILCVSSY--YSKVS--CDLFQRIQHL  339 (361)
Q Consensus       311 ~h~~----~--v~~~~~s~s--~~~v~--~dg~i~iW~~  339 (361)
                      .+..    .  ...+.++++  +++++  .++.|.+|++
T Consensus       219 ~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i  257 (330)
T PRK11028        219 MMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSV  257 (330)
T ss_pred             cCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEE
Confidence            2211    1  112333333  23332  5789999944

>KOG4190|consensus

Probab=98.98  E-value=6.8e-10  Score=98.84  Aligned_cols=160  Identities=20%  Similarity=0.370  Sum_probs=114.5

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC-------CeEEEEEeCCCCCeEEEEEecCCCEEEEEEC
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-------GKCVLQYSGHSGSVNSVRFLPNKDLVLSASG  223 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~-------~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~  223 (361)
                      .-.+..+.||+..|..++--.+.+.+++++.|.+|++|.++.       ..+..++..|..+|.++.|-.+-+.+++  .
T Consensus       725 ~irL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~S--c  802 (1034)
T KOG4190|consen  725 HIRLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIAS--C  802 (1034)
T ss_pred             eeeeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeee--c
Confidence            345678899999999998777888999999999999999863       2477788899999999999888777765  4


Q ss_pred             CCcEEEEeccccccccC---CCCCCCCCCC---CC-------------CCCCceeccc----c-cEEE--eCCCCcEEEE
Q psy8430         224 DKSVHIWQAVINWECLN---NDNDSDLDES---KE-------------PDESSITLRT----P-VKEL--LGHSNVVIAA  277 (361)
Q Consensus       224 d~~i~lwd~~~~~~~~~---~~~~~~~~~~---~~-------------~~~~~~~~~~----~-~~~~--~~~~~~v~~~  277 (361)
                      ||.|++||.-.+.....   ..........   ..             ..++....+.    + .+..  .+....+.++
T Consensus       803 D~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~i  882 (1034)
T KOG4190|consen  803 DGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAI  882 (1034)
T ss_pred             cCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEE
Confidence            89999999866654332   1111111110   00             0001111111    1 1111  2345678899


Q ss_pred             EEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecC
Q psy8430         278 DWLSDGEQVITASWDRVANLFDVETGTILQSLTGH  312 (361)
Q Consensus       278 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h  312 (361)
                      ++-+.|++++.+-..|.|.+.|.++|+.+..|...
T Consensus       883 aVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpm  917 (1034)
T KOG4190|consen  883 AVADKGNKLAAALSNGCIAILDARNGKVINSWRPM  917 (1034)
T ss_pred             EeccCcchhhHHhcCCcEEEEecCCCceeccCCcc
Confidence            99999999999999999999999999999888643

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=98.97  E-value=6.8e-08  Score=89.23  Aligned_cols=127  Identities=16%  Similarity=0.208  Sum_probs=89.2

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCC---CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEE-EEECCC--
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASAD---RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDK--  225 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d---~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~--  225 (361)
                      ...+.+..+...+.+.+|+|+|++|+.++.+   ..|.+||+.+++... +..+.+.+.+++|+|+++.|+ +.+.++  
T Consensus       180 ~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spDg~~l~~~~~~~~~~  258 (417)
T TIGR02800       180 ANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSPDGSKLAVSLSKDGNP  258 (417)
T ss_pred             CCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEECCCCCc
Confidence            3345566777789999999999998887654   479999998886543 333566677899999998766 444444  


Q ss_pred             cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC-C--cEEEeeCCC
Q psy8430         226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-R--VANLFDVET  302 (361)
Q Consensus       226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-~--~v~iwd~~~  302 (361)
                      .|.+||+.++                           ....+..+........|+|+|++|+.++.. +  .|+++|+.+
T Consensus       259 ~i~~~d~~~~---------------------------~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~  311 (417)
T TIGR02800       259 DIYVMDLDGK---------------------------QLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADG  311 (417)
T ss_pred             cEEEEECCCC---------------------------CEEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCC
Confidence            5888887654                           222333344444567899999998876643 3  588888887


Q ss_pred             CeEE
Q psy8430         303 GTIL  306 (361)
Q Consensus       303 ~~~~  306 (361)
                      ++..
T Consensus       312 ~~~~  315 (417)
T TIGR02800       312 GEVR  315 (417)
T ss_pred             CCEE
Confidence            6643

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>PRK00178 tolB translocation protein TolB; Provisional

Probab=98.95  E-value=9.8e-08  Score=88.50  Aligned_cols=125  Identities=13%  Similarity=0.145  Sum_probs=87.4

Q ss_pred             eEEeeccCCCeEEEEEcCCCCEEEEEeCC---CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEE-EEECCC--cE
Q psy8430         154 IRSFSGHRDGVWDVAVRPGQPVLGSASAD---RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDK--SV  227 (361)
Q Consensus       154 ~~~l~~h~~~V~~l~~~~~~~~l~s~s~d---~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~--~i  227 (361)
                      .+.+..+...+....|+|||+.|+..+.+   ..|.+||+.+++... +....+.+....|+|+|+.++ +.+.+|  .|
T Consensus       191 ~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~I  269 (430)
T PRK00178        191 AVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEI  269 (430)
T ss_pred             ceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCEEEEEEccCCCceE
Confidence            45566777889999999999988877654   368999998886543 232344556789999999876 455555  57


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC-CC--cEEEeeCCCCe
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-DR--VANLFDVETGT  304 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~--~v~iwd~~~~~  304 (361)
                      .+||+.++                           ....+..+........|+|+|+.++..+. ++  .|+++|+.+++
T Consensus       270 y~~d~~~~---------------------------~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~  322 (430)
T PRK00178        270 YVMDLASR---------------------------QLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGR  322 (430)
T ss_pred             EEEECCCC---------------------------CeEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence            77787654                           22333344445566789999998876654 33  57788888776


Q ss_pred             EE
Q psy8430         305 IL  306 (361)
Q Consensus       305 ~~  306 (361)
                      ..
T Consensus       323 ~~  324 (430)
T PRK00178        323 AE  324 (430)
T ss_pred             EE
Confidence            43

>KOG1334|consensus

Probab=98.95  E-value=1.4e-09  Score=95.37  Aligned_cols=164  Identities=20%  Similarity=0.237  Sum_probs=126.1

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe-CCCCCeEEEEEec--CCCEEEEEECCC
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLP--NKDLVLSASGDK  225 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~-~h~~~v~~v~~~~--~~~~l~s~~~d~  225 (361)
                      ....+...|..|.+-|..+.|+..|..|++||.|..|.+||+..++....|. +|...|-.-.|.|  +...+++++.||
T Consensus       130 qr~~l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dg  209 (559)
T KOG1334|consen  130 QRLRLQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDG  209 (559)
T ss_pred             HHhhhhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccC
Confidence            3446677888999999999999999999999999999999999987776664 7999999999998  455799999999


Q ss_pred             cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEeeCCCCe
Q psy8430         226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG-EQVITASWDRVANLFDVETGT  304 (361)
Q Consensus       226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~  304 (361)
                      .+++=.+.....+                       .-...+..|.++|..++.-|+. .-|++++.|+.+.-+|++++.
T Consensus       210 qvr~s~i~~t~~~-----------------------e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~  266 (559)
T KOG1334|consen  210 QVRVSEILETGYV-----------------------ENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDV  266 (559)
T ss_pred             ceeeeeeccccce-----------------------ecceecccccCccceeeecCCCCCcccccccccceeeeeeccCC
Confidence            9998766433211                       1245666799999999999855 457899999999999999775


Q ss_pred             EEEEee---cCCC---CCeE---------EEEEcCCCcccCCCeEEEEcCCCC
Q psy8430         305 ILQSLT---GHDE---EPHI---------LCVSSYYSKVSCDLFQRIQHLDCG  342 (361)
Q Consensus       305 ~~~~~~---~h~~---~v~~---------~~~s~s~~~v~~dg~i~iW~~d~~  342 (361)
                      +-..+.   .+..   ....         .++.++     .|-.+++|  |.+
T Consensus       267 pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG-----~dqf~RvY--D~R  312 (559)
T KOG1334|consen  267 PAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGG-----SDQFARVY--DQR  312 (559)
T ss_pred             ccceeeeeccCCccceeeeeEecCCCCccccccCC-----hhhhhhhh--ccc
Confidence            543332   1222   1111         444455     89999999  883

>KOG0280|consensus

Probab=98.88  E-value=1.4e-07  Score=78.04  Aligned_cols=157  Identities=15%  Similarity=0.108  Sum_probs=112.3

Q ss_pred             CCCeEEEEEcC---CCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCC------CCeEEEEEecCCCEEEEEECCCcEEEE
Q psy8430         161 RDGVWDVAVRP---GQP-VLGSASADRTVRLWSTQTGKCVLQYSGHS------GSVNSVRFLPNKDLVLSASGDKSVHIW  230 (361)
Q Consensus       161 ~~~V~~l~~~~---~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~------~~v~~v~~~~~~~~l~s~~~d~~i~lw  230 (361)
                      .+.+..+.|..   +|. .++-+..+|.|.++..........+++-.      ....++.|++.+..++++-.+|.+.+-
T Consensus        69 ts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v  148 (339)
T KOG0280|consen   69 TSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGV  148 (339)
T ss_pred             ccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEE
Confidence            35566676653   444 67777888999998876554444444321      124578899999999999999998844


Q ss_pred             eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEeeCC-CCeEEEE
Q psy8430         231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVE-TGTILQS  308 (361)
Q Consensus       231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~-~~~~~~~  308 (361)
                      +....                        .-..++.+.+|.-.++.++|+. +.+.+++|+.|+.+..||+| .++.+..
T Consensus       149 ~~t~~------------------------~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~  204 (339)
T KOG0280|consen  149 YETEM------------------------VLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWH  204 (339)
T ss_pred             eccee------------------------eeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeee
Confidence            33211                        1124557788999999999976 44688999999999999999 4455544


Q ss_pred             -eecCCCCCeE---------EEEEcCCCcccCCCeEEEEcCCCCCCCCcc
Q psy8430         309 -LTGHDEEPHI---------LCVSSYYSKVSCDLFQRIQHLDCGTSENPI  348 (361)
Q Consensus       309 -~~~h~~~v~~---------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~  348 (361)
                       -+.|+..|.+         .+++|+     +|-.|++|  |+++..+|.
T Consensus       205 n~kvH~~GV~SI~ss~~~~~~I~TGs-----YDe~i~~~--DtRnm~kPl  247 (339)
T KOG0280|consen  205 NSKVHTSGVVSIYSSPPKPTYIATGS-----YDECIRVL--DTRNMGKPL  247 (339)
T ss_pred             cceeeecceEEEecCCCCCceEEEec-----cccceeee--ehhcccCcc
Confidence             4557777666         788888     99999999  996555554

>KOG2695|consensus

Probab=98.88  E-value=6.4e-09  Score=87.61  Aligned_cols=145  Identities=17%  Similarity=0.168  Sum_probs=109.9

Q ss_pred             EEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCC
Q psy8430         167 VAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDS  245 (361)
Q Consensus       167 l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~  245 (361)
                      ++|+-+-. +=++.|.+-.|-+-|+.+|-. ..|. ..+.|.++.|...++++..|+.+|.|...|++....        
T Consensus       217 CawSlni~gyhfs~G~sqqv~L~nvetg~~-qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnq--------  286 (425)
T KOG2695|consen  217 CAWSLNIMGYHFSVGLSQQVLLTNVETGHQ-QSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQ--------  286 (425)
T ss_pred             hhhhhccceeeecccccceeEEEEeecccc-cccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeeccc--------
Confidence            46665322 336667777888889887742 3344 677899999999899999999999999999986521        


Q ss_pred             CCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEeeCCCCeE---EEEeecCCCCCeE---
Q psy8430         246 DLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTI---LQSLTGHDEEPHI---  318 (361)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~---~~~~~~h~~~v~~---  318 (361)
                                   ...-+...+ -|.+.|+++.... ++++|.+.+.+|.|.+||.+.-++   +.++.+|.+.-.-   
T Consensus       287 -------------G~~~~a~rl-yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~  352 (425)
T KOG2695|consen  287 -------------GNGWCAQRL-YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPA  352 (425)
T ss_pred             -------------CCCcceEEE-EcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeeccccccccccc
Confidence                         011133333 4888999988766 788999999999999999998777   8999998754332   


Q ss_pred             -------EEEEcCCCcccCCCeEEEEcCC
Q psy8430         319 -------LCVSSYYSKVSCDLFQRIQHLD  340 (361)
Q Consensus       319 -------~~~s~s~~~v~~dg~i~iW~~d  340 (361)
                             ++++++     .|...|||.++
T Consensus       353 ~v~~eeg~I~s~G-----dDcytRiWsl~  376 (425)
T KOG2695|consen  353 HVKEEEGSIFSVG-----DDCYTRIWSLD  376 (425)
T ss_pred             ccccccceEEEcc-----CeeEEEEEecc
Confidence                   777788     99999999444

>PRK04792 tolB translocation protein TolB; Provisional

Probab=98.88  E-value=2e-07  Score=86.48  Aligned_cols=124  Identities=15%  Similarity=0.190  Sum_probs=83.8

Q ss_pred             EEeeccCCCeEEEEEcCCCCEEEEEeCC-C--cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEE-EECCCc--EE
Q psy8430         155 RSFSGHRDGVWDVAVRPGQPVLGSASAD-R--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLS-ASGDKS--VH  228 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~~~~l~s~s~d-~--~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s-~~~d~~--i~  228 (361)
                      +.+..+...+.+..|+|||+.|+..+.+ +  .|.+||+.+++... +....+.....+|+|+|+.|+. .+.++.  |.
T Consensus       211 ~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy  289 (448)
T PRK04792        211 QMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDGKKLALVLSKDGQPEIY  289 (448)
T ss_pred             eEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEE
Confidence            4455667788899999999988876543 2  58889998876432 2222334457899999997764 566775  66


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC-CC--cEEEeeCCCCeE
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-DR--VANLFDVETGTI  305 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~--~v~iwd~~~~~~  305 (361)
                      ++|+.++                           ....+..+.......+|+|+|++++..+. ++  .|+++|+.+++.
T Consensus       290 ~~dl~tg---------------------------~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~  342 (448)
T PRK04792        290 VVDIATK---------------------------ALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKV  342 (448)
T ss_pred             EEECCCC---------------------------CeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCE
Confidence            6676544                           22333344455667889999998877654 33  477778887765


Q ss_pred             E
Q psy8430         306 L  306 (361)
Q Consensus       306 ~  306 (361)
                      .
T Consensus       343 ~  343 (448)
T PRK04792        343 S  343 (448)
T ss_pred             E
Confidence            3

>PRK04922 tolB translocation protein TolB; Provisional

Probab=98.88  E-value=2.7e-07  Score=85.51  Aligned_cols=122  Identities=15%  Similarity=0.137  Sum_probs=82.2

Q ss_pred             eeccCCCeEEEEEcCCCCEEE-EEeCCC--cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC-CCc--EEEE
Q psy8430         157 FSGHRDGVWDVAVRPGQPVLG-SASADR--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DKS--VHIW  230 (361)
Q Consensus       157 l~~h~~~V~~l~~~~~~~~l~-s~s~d~--~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~~--i~lw  230 (361)
                      +..+.+...+..|+|||+.|+ +.+.++  .|.+||+.+++.. .+..+.......+|+|+|+.++.++. +|.  |.++
T Consensus       243 l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~  321 (433)
T PRK04922        243 VASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLT-RLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRV  321 (433)
T ss_pred             eccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEE
Confidence            334455566789999999665 555555  5999999887643 44445556678899999998877663 555  5555


Q ss_pred             eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC---cEEEeeCCCCeEE
Q psy8430         231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR---VANLFDVETGTIL  306 (361)
Q Consensus       231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~---~v~iwd~~~~~~~  306 (361)
                      |+.++                           ....+..+.......+|+|+|++++..+.++   .|.+||+.+++..
T Consensus       322 dl~~g---------------------------~~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~  373 (433)
T PRK04922        322 AASGG---------------------------SAERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR  373 (433)
T ss_pred             ECCCC---------------------------CeEEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE
Confidence            55433                           1222222333445689999999998776543   5899999887754

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.87  E-value=1.2e-08  Score=59.82  Aligned_cols=39  Identities=38%  Similarity=0.886  Sum_probs=36.9

Q ss_pred             CeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430         193 GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       193 ~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd  231 (361)
                      |+++.++.+|.+.|.+++|+|++..|++++.|+.|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            467889999999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG1240|consensus

Probab=98.85  E-value=3.8e-07  Score=88.73  Aligned_cols=177  Identities=14%  Similarity=0.100  Sum_probs=120.5

Q ss_pred             eeeeccceeEEeeecCc-----cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC--Ce----------
Q psy8430         132 KLKVQTSKIVSSFKTSL-----LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT--GK----------  194 (361)
Q Consensus       132 ~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~--~~----------  194 (361)
                      -..+..+..+++|....     ...+...++.--.+.+.++...+.+..+|.|+.||.|++.+++.  ..          
T Consensus      1064 FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~ 1143 (1431)
T KOG1240|consen 1064 FVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIP 1143 (1431)
T ss_pred             EEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEEEEEccccccccceeeeeecc
Confidence            34455666677776544     22233444444568899999999999999999999999998863  10          


Q ss_pred             -------EE-------------E----------E-------------EeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430         195 -------CV-------------L----------Q-------------YSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       195 -------~~-------------~----------~-------------~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd  231 (361)
                             .+             .          .             .....+.|++++.+|.+++++.|...|.+.+||
T Consensus      1144 n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWD 1223 (1431)
T KOG1240|consen 1144 NLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWD 1223 (1431)
T ss_pred             cccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEE
Confidence                   00             0          0             011347899999999999999999999999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCC---CCEEEEEe--CCCcEEEeeCCCCeE
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSD---GEQVITAS--WDRVANLFDVETGTI  305 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~---~~~l~s~~--~d~~v~iwd~~~~~~  305 (361)
                      ++-+.                          ++..+ .++..++..+..+|-   ..+.++++  ..+.|.+|++.+|.+
T Consensus      1224 LRF~~--------------------------~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~ 1277 (1431)
T KOG1240|consen 1224 LRFRV--------------------------PILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLR 1277 (1431)
T ss_pred             eecCc--------------------------eeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcc
Confidence            98653                          22222 234466777776663   24555554  467899999999987


Q ss_pred             EEEeecC-CCC-------C------------eE-------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         306 LQSLTGH-DEE-------P------------HI-------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       306 ~~~~~~h-~~~-------v------------~~-------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      ..++-.. ..+       .            .+       ++.+|+     .|..||.|  |.
T Consensus      1278 ~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltgg-----sd~kIR~w--D~ 1333 (1431)
T KOG1240|consen 1278 QTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGG-----SDMKIRKW--DP 1333 (1431)
T ss_pred             eEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecC-----Cccceeec--cC
Confidence            7666433 111       1            01       566666     99999999  87

>KOG3914|consensus

Probab=98.84  E-value=4.4e-08  Score=84.20  Aligned_cols=119  Identities=18%  Similarity=0.327  Sum_probs=88.0

Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCC
Q psy8430         164 VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDN  243 (361)
Q Consensus       164 V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~  243 (361)
                      ++-+..+......-.++....+.+|....+.+. .+-||-+.+..|+|+||++.++++..|..|++-......       
T Consensus       113 i~~~~~~~sv~v~dkagD~~~~di~s~~~~~~~-~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f-------  184 (390)
T KOG3914|consen  113 ISFIREDTSVLVADKAGDVYSFDILSADSGRCE-PILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATF-------  184 (390)
T ss_pred             eeeeeccceEEEEeecCCceeeeeecccccCcc-hhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCccc-------
Confidence            333444433334444555667777877665443 445799999999999999999999999999987653221       


Q ss_pred             CCCCCCCCCCCCCceecccccE-EEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430         244 DSDLDESKEPDESSITLRTPVK-ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~  310 (361)
                                         .+. -..||...|..++.-++ ..|++++.|+++++||+++|+++.++.
T Consensus       185 -------------------~IesfclGH~eFVS~isl~~~-~~LlS~sGD~tlr~Wd~~sgk~L~t~d  232 (390)
T KOG3914|consen  185 -------------------VIESFCLGHKEFVSTISLTDN-YLLLSGSGDKTLRLWDITSGKLLDTCD  232 (390)
T ss_pred             -------------------chhhhccccHhheeeeeeccC-ceeeecCCCCcEEEEecccCCcccccc
Confidence                               122 23589999999999754 458999999999999999999886664

>KOG1064|consensus

Probab=98.84  E-value=1.4e-08  Score=101.71  Aligned_cols=146  Identities=21%  Similarity=0.274  Sum_probs=118.1

Q ss_pred             eccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeC-CCCCeEEEEEecCCCEEEEEECCCcEEEEeccccc
Q psy8430         158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG-HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW  236 (361)
Q Consensus       158 ~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~  236 (361)
                      +.|-..|.++.-+|...+.++|+.||.|++|....++.+.+++. -...|+.+.|+..|+.+..+..||.+.+|.+..  
T Consensus      2205 k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~p-- 2282 (2439)
T KOG1064|consen 2205 KHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQASP-- 2282 (2439)
T ss_pred             ecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccCC--
Confidence            34556788888889888999999999999999998888888862 237899999999999999999999999998752  


Q ss_pred             cccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe---CCCcEEEeeCCC---CeEEEEee
Q psy8430         237 ECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS---WDRVANLFDVET---GTILQSLT  310 (361)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~---~d~~v~iwd~~~---~~~~~~~~  310 (361)
                                               .+......|......+.|-.  ..+++++   .++.+.+||..-   ..++.  .
T Consensus      2283 -------------------------k~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~ 2333 (2439)
T KOG1064|consen 2283 -------------------------KPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVH--T 2333 (2439)
T ss_pred             -------------------------cceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceee--e
Confidence                                     36677778888888888853  5666654   467899999642   23344  7


Q ss_pred             cCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         311 GHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       311 ~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      +|.+.+++        +++||+     .+|.|++|  |+
T Consensus      2334 ~H~~gaT~l~~~P~~qllisgg-----r~G~v~l~--D~ 2365 (2439)
T KOG1064|consen 2334 CHDGGATVLAYAPKHQLLISGG-----RKGEVCLF--DI 2365 (2439)
T ss_pred             ecCCCceEEEEcCcceEEEecC-----CcCcEEEe--eh
Confidence            78888887        778888     99999999  88

>PRK02889 tolB translocation protein TolB; Provisional

Probab=98.81  E-value=4.6e-07  Score=83.71  Aligned_cols=124  Identities=14%  Similarity=0.132  Sum_probs=81.4

Q ss_pred             eeccCCCeEEEEEcCCCCEEE-EEeCCCcEEEEeC--CCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC-CCcEEEEec
Q psy8430         157 FSGHRDGVWDVAVRPGQPVLG-SASADRTVRLWST--QTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DKSVHIWQA  232 (361)
Q Consensus       157 l~~h~~~V~~l~~~~~~~~l~-s~s~d~~i~~wd~--~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~~i~lwd~  232 (361)
                      +....+.+.+..|+|||+.|+ +.+.++...+|.+  ..+. ...+..+...+....|+|+|+.++..+. +|...+|.+
T Consensus       235 l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~  313 (427)
T PRK02889        235 VANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRM  313 (427)
T ss_pred             eecCCCCccceEECCCCCEEEEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEE
Confidence            333445667899999999776 5677887666654  4443 4445545566678899999998776554 567777765


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC---cEEEeeCCCCeEE
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR---VANLFDVETGTIL  306 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~---~v~iwd~~~~~~~  306 (361)
                      ....                         .....+...........|+|+|++++..+.++   .|++||+.+++..
T Consensus       314 ~~~~-------------------------g~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~  365 (427)
T PRK02889        314 PASG-------------------------GAAQRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVT  365 (427)
T ss_pred             ECCC-------------------------CceEEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeE
Confidence            3210                         01112222223344578999999998877654   5999999987654

>KOG1409|consensus

Probab=98.80  E-value=3.2e-07  Score=77.57  Aligned_cols=161  Identities=12%  Similarity=0.153  Sum_probs=114.1

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEE
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  228 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~  228 (361)
                      ++-...+....|.+.|..+-|+-....+++.+.|..+.---.+.+..+.-+. ......++.|.-.  +...|...|.|.
T Consensus       102 nkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~-~~~~~t~~~~d~~--~~fvGd~~gqvt  178 (404)
T KOG1409|consen  102 NKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYN-FETPASALQFDAL--YAFVGDHSGQIT  178 (404)
T ss_pred             hhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceE-eeccCCCCceeeE--EEEecccccceE
Confidence            5556778888999999999999999999999999887644445554333222 0111111111111  344455556555


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE-EE
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI-LQ  307 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~-~~  307 (361)
                      +-.+.                        .....++.++.+|.+.+++++|.|....+.+|..|..+.+||+--.+- ..
T Consensus       179 ~lr~~------------------------~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~  234 (404)
T KOG1409|consen  179 MLKLE------------------------QNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAY  234 (404)
T ss_pred             EEEEe------------------------ecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceee
Confidence            54432                        122347888999999999999999999999999999999999874332 34


Q ss_pred             EeecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         308 SLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       308 ~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      .+.+|...|..        .+++++     .||.|-+|+|+.
T Consensus       235 el~gh~~kV~~l~~~~~t~~l~S~~-----edg~i~~w~mn~  271 (404)
T KOG1409|consen  235 ELQGHNDKVQALSYAQHTRQLISCG-----EDGGIVVWNMNV  271 (404)
T ss_pred             eeccchhhhhhhhhhhhheeeeecc-----CCCeEEEEeccc
Confidence            56778887776        788999     999999996665

>KOG2695|consensus

Probab=98.79  E-value=2e-08  Score=84.76  Aligned_cols=128  Identities=12%  Similarity=0.226  Sum_probs=102.2

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-----eEEEEEeCCCCCeEEEEEec-CCCEEEEEECCCcEEEEeccc
Q psy8430         161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-----KCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVI  234 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~-----~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~lwd~~~  234 (361)
                      ++.|.++.|...+++++.|...|.|...|++.+     .+...+. |++.|+++..-. +++.|++.+.+|+|++||.+.
T Consensus       252 ksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly-h~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~  330 (425)
T KOG2695|consen  252 KSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY-HDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRA  330 (425)
T ss_pred             chhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEE-cCcchhhhhhhccccceEeeccCcCceeEeeehh
Confidence            466888889988999999999999999999754     4555666 999999998776 788999999999999999985


Q ss_pred             cccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEE--EEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecC
Q psy8430         235 NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIA--ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH  312 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h  312 (361)
                      .+.                       ...+....||.+.-.-  +-+++....+++++.|-..+||.++.|..+.++.-.
T Consensus       331 ~K~-----------------------~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf~  387 (425)
T KOG2695|consen  331 TKC-----------------------KKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPFP  387 (425)
T ss_pred             hhc-----------------------ccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeeccCCC
Confidence            421                       1246777788654332  234566778999999999999999999999888643

>KOG1334|consensus

Probab=98.77  E-value=3.2e-08  Score=87.05  Aligned_cols=183  Identities=17%  Similarity=0.147  Sum_probs=125.6

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEE--e-CCCC---CeEEEEEecCCC-EEEEEEC
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQY--S-GHSG---SVNSVRFLPNKD-LVLSASG  223 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~--~-~h~~---~v~~v~~~~~~~-~l~s~~~  223 (361)
                      +-...+..|.++|..++..|+.. -|.++|.|+.+.-+|++.+.+...+  . .+..   ....++..|... .+++++.
T Consensus       223 e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~  302 (559)
T KOG1334|consen  223 ENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGGS  302 (559)
T ss_pred             ecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCccccccCCh
Confidence            33455667999999999999655 7999999999999999877443322  2 2333   467888888655 7999999


Q ss_pred             CCcEEEEeccccccccCCC-----C--------CCCCCC-----------------CCCCCCCce-------ec---ccc
Q psy8430         224 DKSVHIWQAVINWECLNND-----N--------DSDLDE-----------------SKEPDESSI-------TL---RTP  263 (361)
Q Consensus       224 d~~i~lwd~~~~~~~~~~~-----~--------~~~~~~-----------------~~~~~~~~~-------~~---~~~  263 (361)
                      |..+++||.+.-.+.....     .        ...+..                 ..+......       ..   ...
T Consensus       303 dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~  382 (559)
T KOG1334|consen  303 DQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQY  382 (559)
T ss_pred             hhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhc
Confidence            9999999987554331100     0        000000                 000000000       00   012


Q ss_pred             c-EEEeCCCC--cEEEEE-EcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE--------EEEEcCCCcccCC
Q psy8430         264 V-KELLGHSN--VVIAAD-WLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI--------LCVSSYYSKVSCD  331 (361)
Q Consensus       264 ~-~~~~~~~~--~v~~~~-~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~--------~~~s~s~~~v~~d  331 (361)
                      + ..++||.+  .|..+- |-|...|+++|+.-|.|.||+-.+++.++-+.+-...|.|        ++||++     -|
T Consensus       383 ~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSG-----id  457 (559)
T KOG1334|consen  383 VKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSG-----ID  457 (559)
T ss_pred             cchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccC-----Cc
Confidence            2 23678865  355554 4678899999999999999999999999988887667777        889999     99


Q ss_pred             CeEEEEcCCC
Q psy8430         332 LFQRIQHLDC  341 (361)
Q Consensus       332 g~i~iW~~d~  341 (361)
                      ..||||  -.
T Consensus       458 ~DVKIW--TP  465 (559)
T KOG1334|consen  458 HDVKIW--TP  465 (559)
T ss_pred             cceeee--cC
Confidence            999999  66

>PRK05137 tolB translocation protein TolB; Provisional

Probab=98.75  E-value=9.9e-07  Score=81.84  Aligned_cols=122  Identities=8%  Similarity=0.073  Sum_probs=84.5

Q ss_pred             EEeeccCCCeEEEEEcCCCCEEE-EEeCCCc--EEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC-CC--cEE
Q psy8430         155 RSFSGHRDGVWDVAVRPGQPVLG-SASADRT--VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DK--SVH  228 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~~~~l~-s~s~d~~--i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~--~i~  228 (361)
                      ..+..+.+.+.+.+|+|||..|+ +.+.++.  |.+||+.++... .+..+........|+|+|+.++.++. +|  .|.
T Consensus       239 ~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy  317 (435)
T PRK05137        239 ELVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTT-RLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLY  317 (435)
T ss_pred             EEeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCceE-EccCCCCccCceeEcCCCCEEEEEECCCCCCeEE
Confidence            34556677788899999998665 5566655  777788877653 45556666778999999998887663 44  577


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC---CcEEEeeCCCCe
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD---RVANLFDVETGT  304 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~v~iwd~~~~~  304 (361)
                      +||+..+                           ....+..+...+....|+|+|++++..+.+   ..|.+||+.++.
T Consensus       318 ~~d~~g~---------------------------~~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~  369 (435)
T PRK05137        318 VMNADGS---------------------------NPRRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG  369 (435)
T ss_pred             EEECCCC---------------------------CeEEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCc
Confidence            7776543                           223333334456678899999999887654   357888986543

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=98.71  E-value=7.4e-06  Score=73.75  Aligned_cols=131  Identities=17%  Similarity=0.078  Sum_probs=89.3

Q ss_pred             ccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE-CCCc
Q psy8430         148 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKS  226 (361)
Q Consensus       148 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~~  226 (361)
                      ..+.+.+.++......-..+.|+|||++++.++.||.|.++|+.+++.+.++. -.....+++++++|+++++++ .++.
T Consensus        23 ~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~-~G~~~~~i~~s~DG~~~~v~n~~~~~  101 (369)
T PF02239_consen   23 GATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIK-VGGNPRGIAVSPDGKYVYVANYEPGT  101 (369)
T ss_dssp             TTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE--SSEEEEEEE--TTTEEEEEEEETTE
T ss_pred             CCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEe-cCCCcceEEEcCCCCEEEEEecCCCc
Confidence            34456677777654444457899999999999999999999999999999988 456678999999999988776 5889


Q ss_pred             EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC-------CCCcEEEEEEcCCCCEEEEE-eCCCcEEEe
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG-------HSNVVIAADWLSDGEQVITA-SWDRVANLF  298 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~s~-~~d~~v~iw  298 (361)
                      +.++|..+.+                          +++.+..       ....+.++..+|....++.. -..+.|.+.
T Consensus       102 v~v~D~~tle--------------------------~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vV  155 (369)
T PF02239_consen  102 VSVIDAETLE--------------------------PVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVV  155 (369)
T ss_dssp             EEEEETTT----------------------------EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEE
T ss_pred             eeEecccccc--------------------------ceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEE
Confidence            9999987663                          2333322       34567788888888855554 445888888


Q ss_pred             eCCCCeE
Q psy8430         299 DVETGTI  305 (361)
Q Consensus       299 d~~~~~~  305 (361)
                      |......
T Consensus       156 dy~d~~~  162 (369)
T PF02239_consen  156 DYSDPKN  162 (369)
T ss_dssp             ETTTSSC
T ss_pred             Eeccccc
Confidence            8776543

...

>KOG1354|consensus

Probab=98.71  E-value=7.7e-08  Score=81.21  Aligned_cols=166  Identities=12%  Similarity=0.200  Sum_probs=111.6

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC---eEEEEEeCC-----CCCeEEEEEecC-CCEEEEEECCCcEEE
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG---KCVLQYSGH-----SGSVNSVRFLPN-KDLVLSASGDKSVHI  229 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~---~~~~~~~~h-----~~~v~~v~~~~~-~~~l~s~~~d~~i~l  229 (361)
                      +|.-.|+++.++.|+..++++ .|-.|.+|+++-.   -.+..++.+     ..-|++..|+|. -++|+-.+..|+|++
T Consensus       162 aHtyhiNSIS~NsD~Et~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrL  240 (433)
T KOG1354|consen  162 AHTYHINSISVNSDKETFLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRL  240 (433)
T ss_pred             cceeEeeeeeecCccceEeec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEE
Confidence            689999999999999988876 5789999998643   223334433     356889999994 456777888999999


Q ss_pred             EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCC-CCeEEEE
Q psy8430         230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE-TGTILQS  308 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~-~~~~~~~  308 (361)
                      -|++....+.......+.+.  .+.        ...-+.+--..|..+.|+++|+|+++-+. -+|++||+. ..+++.+
T Consensus       241 cDmR~~aLCd~hsKlfEepe--dp~--------~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t  309 (433)
T KOG1354|consen  241 CDMRQSALCDAHSKLFEEPE--DPS--------SRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVET  309 (433)
T ss_pred             eechhhhhhcchhhhhcccc--CCc--------chhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceE
Confidence            99986654433222111110  000        00111122346888999999999998865 789999994 5677777


Q ss_pred             eecCCCCCeE-----------------------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         309 LTGHDEEPHI-----------------------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       309 ~~~h~~~v~~-----------------------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      +..|..--..                       .++||+     +...+++++++-
T Consensus       310 ~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGs-----y~n~frvf~~~~  360 (433)
T KOG1354|consen  310 YPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGS-----YNNVFRVFNLAR  360 (433)
T ss_pred             EeehHhHHHHHHHHhhccchhheeEEEEcCCcceEeccc-----ccceEEEecCCC
Confidence            7766532111                       455555     888999994333

>KOG2315|consensus

Probab=98.68  E-value=5.7e-07  Score=80.68  Aligned_cols=114  Identities=21%  Similarity=0.377  Sum_probs=86.1

Q ss_pred             CCCeEEEEEcCCCCEEEE--EeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECC---CcEEEEecccc
Q psy8430         161 RDGVWDVAVRPGQPVLGS--ASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD---KSVHIWQAVIN  235 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s--~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d---~~i~lwd~~~~  235 (361)
                      .++|.++.|+|+|.-++.  |-.=..+.|||++ +.++..+  -.++-+++-|+|.|++++-++.+   |.+.+||+.+.
T Consensus       270 ~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df--~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~  346 (566)
T KOG2315|consen  270 EGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDF--PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNR  346 (566)
T ss_pred             CCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeC--CCCCccceEECCCCCEEEEeecCCCCCceEEEeccch
Confidence            699999999999985554  3445689999985 6666555  36778899999999999888865   78999998754


Q ss_pred             ccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC------CCcEEEeeCCCCeEE
Q psy8430         236 WECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW------DRVANLFDVETGTIL  306 (361)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~------d~~v~iwd~~~~~~~  306 (361)
                      +                          .+..+..  ...+-+.|+|||.+++|++.      |+.++||+.. |..+
T Consensus       347 K--------------------------~i~~~~a--~~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt-G~~l  394 (566)
T KOG2315|consen  347 K--------------------------LIAKFKA--ANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT-GSLL  394 (566)
T ss_pred             h--------------------------hcccccc--CCceEEEEcCCCcEEEEEeccccEEecCCeEEEEec-Ccee
Confidence            3                          3333322  23455789999999999875      6889999975 5544

>PRK01029 tolB translocation protein TolB; Provisional

Probab=98.67  E-value=2.3e-06  Score=78.87  Aligned_cols=125  Identities=20%  Similarity=0.207  Sum_probs=78.5

Q ss_pred             cCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEeCCCC---eEEEEEeCCCCCeEEEEEecCCCEEEEEE-CCCcEEEE
Q psy8430         160 HRDGVWDVAVRPGQPVLGSASA-----DRTVRLWSTQTG---KCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKSVHIW  230 (361)
Q Consensus       160 h~~~V~~l~~~~~~~~l~s~s~-----d~~i~~wd~~~~---~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~~i~lw  230 (361)
                      ..+......|+|||+.|+..+.     |..+.+|++..+   .......++.......+|+|+|+.|+..+ .+|...+|
T Consensus       229 ~~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly  308 (428)
T PRK01029        229 LQGNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIY  308 (428)
T ss_pred             CCCCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEE
Confidence            4445567899999998776553     223455777653   33333333334456789999999877655 56766666


Q ss_pred             eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC---CcEEEeeCCCCeEEE
Q psy8430         231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD---RVANLFDVETGTILQ  307 (361)
Q Consensus       231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~v~iwd~~~~~~~~  307 (361)
                      .+....                       .......+..+...+....|+|+|++|+..+.+   ..|.+||+.+++...
T Consensus       309 ~~~~~~-----------------------~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~  365 (428)
T PRK01029        309 IMQIDP-----------------------EGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQ  365 (428)
T ss_pred             EEECcc-----------------------cccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEE
Confidence            432110                       001223344444566788999999999876553   368999999887643

>KOG1354|consensus

Probab=98.66  E-value=1e-06  Score=74.57  Aligned_cols=142  Identities=18%  Similarity=0.219  Sum_probs=92.6

Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe-----EEEEEeCCC------------CCeEEEEEecCCC--EEEE
Q psy8430         160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-----CVLQYSGHS------------GSVNSVRFLPNKD--LVLS  220 (361)
Q Consensus       160 h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~-----~~~~~~~h~------------~~v~~v~~~~~~~--~l~s  220 (361)
                      ...-|.++.|+..|.+|++|..+|.|-+|.-....     ....++.|.            ..|+.+.|.++++  .++.
T Consensus        24 eadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLl  103 (433)
T KOG1354|consen   24 EADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLL  103 (433)
T ss_pred             hhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEE
Confidence            34668899999999999999999999998754321     233444443            4788999998655  5788


Q ss_pred             EECCCcEEEEeccccccccCCCCCCCCCCCCC------CC---CCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEe
Q psy8430         221 ASGDKSVHIWQAVINWECLNNDNDSDLDESKE------PD---ESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITAS  290 (361)
Q Consensus       221 ~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~  290 (361)
                      .+.|++|++|.+....................      +.   ........|.+.+ .+|.-.|.+++++.|+..++++.
T Consensus       104 stNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSAD  183 (433)
T KOG1354|consen  104 STNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSAD  183 (433)
T ss_pred             ecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeecc
Confidence            88999999999876543331111000000000      00   0001111222222 35788899999999999988874


Q ss_pred             CCCcEEEeeCCC
Q psy8430         291 WDRVANLFDVET  302 (361)
Q Consensus       291 ~d~~v~iwd~~~  302 (361)
                       |=.|.+|+++-
T Consensus       184 -dLRINLWnlei  194 (433)
T KOG1354|consen  184 -DLRINLWNLEI  194 (433)
T ss_pred             -ceeeeeccccc
Confidence             68899999873

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=98.66  E-value=3.8e-06  Score=77.64  Aligned_cols=121  Identities=14%  Similarity=0.161  Sum_probs=84.0

Q ss_pred             eeccCCCeEEEEEcCCCCEEE-EEeCCC--cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC-CC--cEEEE
Q psy8430         157 FSGHRDGVWDVAVRPGQPVLG-SASADR--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DK--SVHIW  230 (361)
Q Consensus       157 l~~h~~~V~~l~~~~~~~~l~-s~s~d~--~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~--~i~lw  230 (361)
                      +..+.+.+.+++|+|||+.|+ +.+.++  .|.+||+.++... .+..+........|+|+++.++.++. ++  .|.++
T Consensus       229 ~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~  307 (417)
T TIGR02800       229 VASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLT-RLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMM  307 (417)
T ss_pred             eecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCCEE-ECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEE
Confidence            334556677899999998665 444444  5888998877543 33445555667899999998876654 34  46666


Q ss_pred             eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC---cEEEeeCCCCeE
Q psy8430         231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR---VANLFDVETGTI  305 (361)
Q Consensus       231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~---~v~iwd~~~~~~  305 (361)
                      |+.++                           ....+..+...+....|+|+|++++.++.++   .|.+||+.++..
T Consensus       308 d~~~~---------------------------~~~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~  358 (417)
T TIGR02800       308 DADGG---------------------------EVRRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE  358 (417)
T ss_pred             ECCCC---------------------------CEEEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCe
Confidence            66433                           2233444455667789999999999988876   789999987654

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG2066|consensus

Probab=98.64  E-value=1.7e-06  Score=81.03  Aligned_cols=141  Identities=15%  Similarity=0.105  Sum_probs=101.2

Q ss_pred             cCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC-----CCEEEEEECCCcEEEEeccccccccCCCCC
Q psy8430         170 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN-----KDLVLSASGDKSVHIWQAVINWECLNNDND  244 (361)
Q Consensus       170 ~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-----~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~  244 (361)
                      +.+|.+++|||.||+|.|-.+.+.+...++. -..++.+|+++|+     .+.+++|+..| +.++.-+           
T Consensus        80 ~~~Gey~asCS~DGkv~I~sl~~~~~~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~-----------  146 (846)
T KOG2066|consen   80 ILEGEYVASCSDDGKVVIGSLFTDDEITQYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERN-----------  146 (846)
T ss_pred             ccCCceEEEecCCCcEEEeeccCCccceeEe-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhh-----------
Confidence            3469999999999999999998887777666 5689999999996     56799999988 7776421           


Q ss_pred             CCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE------
Q psy8430         245 SDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI------  318 (361)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~------  318 (361)
                                   +........+....++|.+++|  .|++++-++.+| |++||+.+++.+..+.-....+..      
T Consensus       147 -------------wlgnk~~v~l~~~eG~I~~i~W--~g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpph  210 (846)
T KOG2066|consen  147 -------------WLGNKDSVVLSEGEGPIHSIKW--RGNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPH  210 (846)
T ss_pred             -------------hhcCccceeeecCccceEEEEe--cCcEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCc
Confidence                         1111122245566789999999  688998888777 899999999888877654444433      


Q ss_pred             EEEEcCCC-cccCCCeEEEEcCCC
Q psy8430         319 LCVSSYYS-KVSCDLFQRIQHLDC  341 (361)
Q Consensus       319 ~~~s~s~~-~v~~dg~i~iW~~d~  341 (361)
                      +.|..... -+|+.-+|+|.  .+
T Consensus       211 l~W~~~~~LVIGW~d~v~i~--~I  232 (846)
T KOG2066|consen  211 LHWQDEDRLVIGWGDSVKIC--SI  232 (846)
T ss_pred             eEecCCCeEEEecCCeEEEE--EE
Confidence            33333311 12366677777  55

>KOG0309|consensus

Probab=98.62  E-value=4.3e-07  Score=84.02  Aligned_cols=145  Identities=23%  Similarity=0.319  Sum_probs=108.9

Q ss_pred             eEEEEEcCCCC---EEEEEeCCCcEEEEeCCCC---eEEEEEeCCCCCeEEEEEecC-CCEEEEEECCCcEEEEeccccc
Q psy8430         164 VWDVAVRPGQP---VLGSASADRTVRLWSTQTG---KCVLQYSGHSGSVNSVRFLPN-KDLVLSASGDKSVHIWQAVINW  236 (361)
Q Consensus       164 V~~l~~~~~~~---~l~s~s~d~~i~~wd~~~~---~~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~i~lwd~~~~~  236 (361)
                      |-.+.|+|...   .+++.+.. ...+|++...   ..-..+.+|...|+.+.|+|. ...+++++.|..+..||+++. 
T Consensus        70 vad~qws~h~a~~~wiVsts~q-kaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp-  147 (1081)
T KOG0309|consen   70 VADVQWSPHPAKPYWIVSTSNQ-KAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSP-  147 (1081)
T ss_pred             hcceecccCCCCceeEEecCcc-hhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCC-
Confidence            55667877432   55555554 4457988533   344556789999999999985 557899999999999998754 


Q ss_pred             cccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC-eEEEEeecCCCC
Q psy8430         237 ECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG-TILQSLTGHDEE  315 (361)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~-~~~~~~~~h~~~  315 (361)
                                              ..++.....-......++|+.....+.+.+..+.|++||.+.| .++..+++|...
T Consensus       148 ------------------------~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~  203 (1081)
T KOG0309|consen  148 ------------------------HRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSS  203 (1081)
T ss_pred             ------------------------CcceeeeecccccCceeeecccCcchhhhccCCceEEEeccCCCcceEEeccccee
Confidence                                    2355555555667778899886666767777788999999976 566788888777


Q ss_pred             CeE---------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         316 PHI---------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       316 v~~---------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      +..         .+++++     .||+|++|  |.
T Consensus       204 vn~~~fnr~~~s~~~s~~-----~d~tvkfw--~y  231 (1081)
T KOG0309|consen  204 VNSIDFNRFKYSEIMSSS-----NDGTVKFW--DY  231 (1081)
T ss_pred             eehHHHhhhhhhhhcccC-----CCCceeee--cc
Confidence            766         678888     99999999  55

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=98.59  E-value=2.7e-06  Score=76.59  Aligned_cols=112  Identities=15%  Similarity=0.141  Sum_probs=81.5

Q ss_pred             CEE-EEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCC
Q psy8430         174 PVL-GSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKE  252 (361)
Q Consensus       174 ~~l-~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      +++ ++-..++.|.+.|..+.+.+..+......-..+.|+|+|+++++++.||.|.++|+.+.+                
T Consensus         6 ~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~----------------   69 (369)
T PF02239_consen    6 NLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGK----------------   69 (369)
T ss_dssp             GEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSS----------------
T ss_pred             cEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCccc----------------
Confidence            344 455678999999999999999998554444557899999999999999999999998763                


Q ss_pred             CCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEeeCCCCeEEEEeecC
Q psy8430         253 PDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTGH  312 (361)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~h  312 (361)
                                .+.++.. .....+++++++|+++++++ ..+.+.++|.++.+.++.+...
T Consensus        70 ----------~v~~i~~-G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~  119 (369)
T PF02239_consen   70 ----------VVATIKV-GGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTG  119 (369)
T ss_dssp             ----------EEEEEE--SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--
T ss_pred             ----------EEEEEec-CCCcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccc
Confidence                      4555544 34567899999999999876 5789999999999999988643

...

>KOG4497|consensus

Probab=98.58  E-value=4.7e-07  Score=76.13  Aligned_cols=71  Identities=18%  Similarity=0.238  Sum_probs=54.7

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG  223 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~  223 (361)
                      +-...+....+++..++|+|||+ +|.+...|-.|.+|.+.+.+... ++.....+..++|+|+|++.+.++.
T Consensus        82 ew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~-~~~pK~~~kg~~f~~dg~f~ai~sR  153 (447)
T KOG4497|consen   82 EWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYL-LPHPKTNVKGYAFHPDGQFCAILSR  153 (447)
T ss_pred             eeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEE-ecccccCceeEEECCCCceeeeeec
Confidence            34455667789999999999995 77778889999999998766543 2323456689999999999877764

>PRK00178 tolB translocation protein TolB; Provisional

Probab=98.57  E-value=9e-06  Score=75.43  Aligned_cols=118  Identities=10%  Similarity=0.032  Sum_probs=77.3

Q ss_pred             cCCCeEEEEEcCCCCEEE-EEeCCC--cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC-CC--cEEEEecc
Q psy8430         160 HRDGVWDVAVRPGQPVLG-SASADR--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DK--SVHIWQAV  233 (361)
Q Consensus       160 h~~~V~~l~~~~~~~~l~-s~s~d~--~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~--~i~lwd~~  233 (361)
                      ..+.+....|+|||+.|+ +.+.++  .|.+||+.++... .+..+........|+|+|+.++..+. ++  .|.++++.
T Consensus       241 ~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~  319 (430)
T PRK00178        241 FEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVN  319 (430)
T ss_pred             CCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECC
Confidence            344556789999999776 444555  5888899887644 34445566677899999998765553 44  46666665


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC-C--cEEEeeCCCCeE
Q psy8430         234 INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-R--VANLFDVETGTI  305 (361)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-~--~v~iwd~~~~~~  305 (361)
                      ++.                           ...+...........|+|+|++++..+.+ +  .|.+||+.+++.
T Consensus       320 ~g~---------------------------~~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~  367 (430)
T PRK00178        320 GGR---------------------------AERVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSV  367 (430)
T ss_pred             CCC---------------------------EEEeecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCE
Confidence            441                           11111111223456799999999887654 3  478899988764

>KOG2315|consensus

Probab=98.54  E-value=5.7e-06  Score=74.45  Aligned_cols=144  Identities=14%  Similarity=0.123  Sum_probs=101.1

Q ss_pred             EEEEcCCCC-E--EEEEeCCC---------cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE--CCCcEEEEe
Q psy8430         166 DVAVRPGQP-V--LGSASADR---------TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS--GDKSVHIWQ  231 (361)
Q Consensus       166 ~l~~~~~~~-~--l~s~s~d~---------~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~--~d~~i~lwd  231 (361)
                      .+.|++-|. +  |++...|.         ++++.+++...+...+. ..++|.++.|+|+++-|+.+-  +=-.+.|||
T Consensus       222 qm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~-k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifn  300 (566)
T KOG2315|consen  222 QMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLL-KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFN  300 (566)
T ss_pred             EEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecC-CCCCceEEEECCCCCEEEEEEecccceEEEEc
Confidence            567888776 2  33334444         57788877445555554 579999999999998876543  446799999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC---CcEEEeeCCCCeEEEE
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD---RVANLFDVETGTILQS  308 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~v~iwd~~~~~~~~~  308 (361)
                      ++-                             ...+.-..++-..+-|+|.|++++.++-+   |.+-|||+.+.+++..
T Consensus       301 lr~-----------------------------~~v~df~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~  351 (566)
T KOG2315|consen  301 LRG-----------------------------KPVFDFPEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAK  351 (566)
T ss_pred             CCC-----------------------------CEeEeCCCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccc
Confidence            863                             33333356677888899999999988765   7799999999999988


Q ss_pred             eecCCCCCeE------EEEEcCCC-cccCCCeEEEEcCCC
Q psy8430         309 LTGHDEEPHI------LCVSSYYS-KVSCDLFQRIQHLDC  341 (361)
Q Consensus       309 ~~~h~~~v~~------~~~s~s~~-~v~~dg~i~iW~~d~  341 (361)
                      +.+....+..      +++|+.-. .+=-|+.++||  +.
T Consensus       352 ~~a~~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiw--hy  389 (566)
T KOG2315|consen  352 FKAANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIW--HY  389 (566)
T ss_pred             cccCCceEEEEcCCCcEEEEEeccccEEecCCeEEE--Ee
Confidence            8875554444      44444311 23348999999  65

>KOG4714|consensus

Probab=98.54  E-value=3e-07  Score=74.86  Aligned_cols=127  Identities=24%  Similarity=0.318  Sum_probs=85.0

Q ss_pred             CCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCe-EEEEEeCCCCCeEEEEEec-CCCEEEEEECCCcEEEEeccccccc
Q psy8430         162 DGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGK-CVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVINWEC  238 (361)
Q Consensus       162 ~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~~~-~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~lwd~~~~~~~  238 (361)
                      ..|.+++-+|. .+.+++|+.||.+-+||.+... +...+..|..+++-|-|+| ++..|++++.||.+.-||..+....
T Consensus       180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~~~l~  259 (319)
T KOG4714|consen  180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDASTTFLS  259 (319)
T ss_pred             ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCCceEE
Confidence            33999999995 4588888999999999998763 3445678999999999999 5778999999999999998753211


Q ss_pred             cCCCCCCCCCCCCCCCCCceecccccEE---E----eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEee
Q psy8430         239 LNNDNDSDLDESKEPDESSITLRTPVKE---L----LGHSNVVIAADWLSDGEQVITASWDRVANLFD  299 (361)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd  299 (361)
                      ..... ...        ..+....+++.   +    ..-.-.|.++.+  -|..+++|+.-+.|++++
T Consensus       260 i~~~~-s~~--------s~WLsgD~v~s~i~i~~ll~~~~~SinsfDV--~g~~lVcgtd~eaIyl~~  316 (319)
T KOG4714|consen  260 ISNQA-SVI--------SSWLSGDPVKSRIEITSLLPSRSLSINSFDV--LGPCLVCGTDAEAIYLTR  316 (319)
T ss_pred             ecCcc-ccc--------cccccCCcccceEeeeccccccceeeeeeec--cCceEEeccccceEEEec
Confidence            10000 000        01111112211   1    111223444444  688999999999998875

>KOG4714|consensus

Probab=98.52  E-value=5e-07  Score=73.62  Aligned_cols=111  Identities=18%  Similarity=0.164  Sum_probs=78.4

Q ss_pred             EEEcCCCCEEEEEeC-----CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC-CCEEEEEECCCcEEEEeccccccccC
Q psy8430         167 VAVRPGQPVLGSASA-----DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN-KDLVLSASGDKSVHIWQAVINWECLN  240 (361)
Q Consensus       167 l~~~~~~~~l~s~s~-----d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~i~lwd~~~~~~~~~  240 (361)
                      .+....++++.+++.     -+..++|+++.-+....-......|.+++-+|. .+.+++|+.||.+.+||.+...    
T Consensus       138 ~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~----  213 (319)
T KOG4714|consen  138 RKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVA----  213 (319)
T ss_pred             cceeecccEEecCCcceEeeccceeeecccccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEccccc----
Confidence            334445556555432     124455665543322222223455999999994 4567788899999999987652    


Q ss_pred             CCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEeeCCC
Q psy8430         241 NDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVET  302 (361)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~  302 (361)
                                           -|...+..|..+++.+-||| ++..|++++.||.+..||..+
T Consensus       214 ---------------------~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~  255 (319)
T KOG4714|consen  214 ---------------------MPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST  255 (319)
T ss_pred             ---------------------chHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence                                 26667788999999999999 788999999999999999874

>PRK04792 tolB translocation protein TolB; Provisional

Probab=98.52  E-value=3.5e-05  Score=71.66  Aligned_cols=116  Identities=15%  Similarity=0.101  Sum_probs=74.3

Q ss_pred             CCeEEEEEcCCCCEEEE-EeCCCc--EEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE-CCCc--EEEEecccc
Q psy8430         162 DGVWDVAVRPGQPVLGS-ASADRT--VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKS--VHIWQAVIN  235 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s-~s~d~~--i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~~--i~lwd~~~~  235 (361)
                      +......|+|||+.|+. .+.++.  |.+||+.+++.. .+..+...+....|+|+++.++..+ .++.  |.++|+.++
T Consensus       262 g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~-~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g  340 (448)
T PRK04792        262 GINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALT-RITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASG  340 (448)
T ss_pred             CCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence            33456899999997764 566665  777888777643 3444556677889999999876554 3454  555555433


Q ss_pred             ccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC-C--cEEEeeCCCCeE
Q psy8430         236 WECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-R--VANLFDVETGTI  305 (361)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-~--~v~iwd~~~~~~  305 (361)
                                                 ....+..........+|+|+|++++..+.+ +  .|.++|+.++..
T Consensus       341 ---------------------------~~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~  386 (448)
T PRK04792        341 ---------------------------KVSRLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAM  386 (448)
T ss_pred             ---------------------------CEEEEecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCe
Confidence                                       122222222233456899999999876653 3  355678887764

>KOG4532|consensus

Probab=98.51  E-value=1.7e-05  Score=65.26  Aligned_cols=126  Identities=10%  Similarity=-0.058  Sum_probs=93.3

Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-e-EEE-EEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccC
Q psy8430         164 VWDVAVRPGQPVLGSASADRTVRLWSTQTG-K-CVL-QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLN  240 (361)
Q Consensus       164 V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~-~-~~~-~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~  240 (361)
                      +.++.+++++.++++.+....|..|.++.. . .+. ......+.=-+..|+.....||++..||++.|||++....   
T Consensus       161 ~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~t---  237 (344)
T KOG4532|consen  161 QNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMAT---  237 (344)
T ss_pred             eeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEeccccc---
Confidence            888999999999999999999999998653 2 222 2223445556788999999999999999999999986521   


Q ss_pred             CCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCC--EEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430         241 NDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE--QVITASWDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~s~~~d~~v~iwd~~~~~~~~~~~  310 (361)
                                        +.......-..|.+.+..+.|++-|.  +|+..-.-+.+.+.|++++.-.+.+.
T Consensus       238 ------------------pm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~  291 (344)
T KOG4532|consen  238 ------------------PMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIV  291 (344)
T ss_pred             ------------------chhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEe
Confidence                              11112222334889999999998553  44444455789999999998776664

>KOG1832|consensus

Probab=98.50  E-value=4.8e-08  Score=91.90  Aligned_cols=168  Identities=17%  Similarity=0.159  Sum_probs=119.6

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCC--cE
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK--SV  227 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~--~i  227 (361)
                      +.+..+++..|....+|++|+.+.+.|+.|+..|.|+++++.+|.......+|..+|+.|.-+.+|..+++.+.-.  -.
T Consensus      1090 RFr~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~Pls 1169 (1516)
T KOG1832|consen 1090 RFRSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLS 1169 (1516)
T ss_pred             hcccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchH
Confidence            3467788889999999999999999999999999999999999988888899999999999888998877665443  46


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEE
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ  307 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~  307 (361)
                      .+|+....                         ..+.+.+.    .-.++.|+....+-+.|+....+.+||+.|+..+.
T Consensus      1170 aLW~~~s~-------------------------~~~~Hsf~----ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~ 1220 (1516)
T KOG1832|consen 1170 ALWDASST-------------------------GGPRHSFD----EDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQ 1220 (1516)
T ss_pred             HHhccccc-------------------------cCcccccc----ccceeehhhhHHHHHhcccccceEEEecccCcHHH
Confidence            78987532                         12333333    33567787665555666666778999999999888


Q ss_pred             EeecCC-C---CCeEEEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeee
Q psy8430         308 SLTGHD-E---EPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVF  354 (361)
Q Consensus       308 ~~~~h~-~---~v~~~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~  354 (361)
                      ++.... .   ...+.-|++...-+-+||.  +|  |+   |.+ ..++.|
T Consensus      1221 tylt~~~~~~y~~n~a~FsP~D~LIlndGv--LW--Dv---R~~-~aIh~F 1263 (1516)
T KOG1832|consen 1221 TYLTDTVTSSYSNNLAHFSPCDTLILNDGV--LW--DV---RIP-EAIHRF 1263 (1516)
T ss_pred             HhcCcchhhhhhccccccCCCcceEeeCce--ee--ee---ccH-HHHhhh
Confidence            753211 1   1111334444333445665  78  88   653 344444

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.49  E-value=1.9e-05  Score=65.67  Aligned_cols=45  Identities=9%  Similarity=0.222  Sum_probs=39.6

Q ss_pred             CCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCC
Q psy8430         270 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE  314 (361)
Q Consensus       270 ~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~  314 (361)
                      ....|..|+.||||..|++.+.+|.|.+|++.+-+..+.|..+..
T Consensus       228 ~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~eq  272 (282)
T PF15492_consen  228 EQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQDEQ  272 (282)
T ss_pred             CCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchhhC
Confidence            456899999999999999999999999999999888888865443

>PRK01029 tolB translocation protein TolB; Provisional

Probab=98.48  E-value=6.8e-06  Score=75.79  Aligned_cols=119  Identities=11%  Similarity=0.106  Sum_probs=78.5

Q ss_pred             CCeEEEEEcCCCCEEEEEe-CCCcEEEEe--CCC-CeEEEEEeCCCCCeEEEEEecCCCEEEEEECC---CcEEEEeccc
Q psy8430         162 DGVWDVAVRPGQPVLGSAS-ADRTVRLWS--TQT-GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD---KSVHIWQAVI  234 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s-~d~~i~~wd--~~~-~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d---~~i~lwd~~~  234 (361)
                      +.....+|+|||..|+..+ .+|...+|.  +.. +.....+..+...+....|+|+|+.|+..+.+   ..|.+||+.+
T Consensus       281 ~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~  360 (428)
T PRK01029        281 GTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLAT  360 (428)
T ss_pred             CCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCC
Confidence            4456789999999777665 466555554  432 22234444455677889999999988876543   3688999876


Q ss_pred             cccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC---CCcEEEeeCCCCeEEE
Q psy8430         235 NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW---DRVANLFDVETGTILQ  307 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---d~~v~iwd~~~~~~~~  307 (361)
                      +.                           ...+......+....|+|+|++|+..+.   ...|++||+..++...
T Consensus       361 g~---------------------------~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~  409 (428)
T PRK01029        361 GR---------------------------DYQLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRK  409 (428)
T ss_pred             CC---------------------------eEEccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE
Confidence            52                           2223222334567889999998875443   3458888988776543

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.44  E-value=3.1e-05  Score=70.67  Aligned_cols=112  Identities=16%  Similarity=0.157  Sum_probs=78.3

Q ss_pred             eEEEEEcC-CCCEEEEE----eCCCc----EEEEeCCCCeE--EEEE-eCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430         164 VWDVAVRP-GQPVLGSA----SADRT----VRLWSTQTGKC--VLQY-SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       164 V~~l~~~~-~~~~l~s~----s~d~~----i~~wd~~~~~~--~~~~-~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd  231 (361)
                      ..++.|+- +...+.+.    +.+|.    -++|+...++.  +... -.....|.|++++|+...++.|+.||.|.+||
T Consensus       208 Pl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD  287 (545)
T PF11768_consen  208 PLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGSIILYD  287 (545)
T ss_pred             cEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEEecCCeEEEEE
Confidence            35667776 33344433    33443    33566544321  1111 24778999999999999999999999999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  303 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~  303 (361)
                      ...+                            +.......-..+.++|||+|..+++|+..|.+.+||+.-.
T Consensus       288 ~~~~----------------------------~t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs  331 (545)
T PF11768_consen  288 TTRG----------------------------VTLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS  331 (545)
T ss_pred             cCCC----------------------------eeeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence            8644                            2222233445788999999999999999999999998743

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.44  E-value=3.5e-05  Score=78.58  Aligned_cols=136  Identities=14%  Similarity=0.172  Sum_probs=82.8

Q ss_pred             eEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCC---------------CCCeEEEEEecCCCE-EEEEECCCc
Q psy8430         164 VWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGH---------------SGSVNSVRFLPNKDL-VLSASGDKS  226 (361)
Q Consensus       164 V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h---------------~~~v~~v~~~~~~~~-l~s~~~d~~  226 (361)
                      -+.++|+| ++.++++.+.++.|++||..++... .+.+.               -.....|+|+|++.. +++-+.++.
T Consensus       685 P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~  763 (1057)
T PLN02919        685 PWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTR-VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSS  763 (1057)
T ss_pred             CeEEEEecCCCeEEEEECCCCeEEEEECCCCeEE-EEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCe
Confidence            36789999 5667777788899999999877542 22211               124567999999884 555566789


Q ss_pred             EEEEeccccccccCCCCCCCC-CCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE
Q psy8430         227 VHIWQAVINWECLNNDNDSDL-DESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI  305 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~  305 (361)
                      |++||+.++............ ..........    ...  ..........++++++|..+++-..++.|++||..++..
T Consensus       764 Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~d----G~g--~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v  837 (1057)
T PLN02919        764 IRALDLKTGGSRLLAGGDPTFSDNLFKFGDHD----GVG--SEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRV  837 (1057)
T ss_pred             EEEEECCCCcEEEEEecccccCcccccccCCC----Cch--hhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeE
Confidence            999998765321100000000 0000000000    000  000112345788999999989999999999999988765


Q ss_pred             E
Q psy8430         306 L  306 (361)
Q Consensus       306 ~  306 (361)
                      .
T Consensus       838 ~  838 (1057)
T PLN02919        838 T  838 (1057)
T ss_pred             E
Confidence            4

>KOG4532|consensus

Probab=98.39  E-value=2.2e-05  Score=64.57  Aligned_cols=146  Identities=14%  Similarity=0.023  Sum_probs=97.2

Q ss_pred             EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCC
Q psy8430         175 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPD  254 (361)
Q Consensus       175 ~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~  254 (361)
                      -+..++.|.++++.+++.+.......-..-.+.++++++++.+.++.+....|..|.+....+                 
T Consensus       130 ~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~se-----------------  192 (344)
T KOG4532|consen  130 PLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESE-----------------  192 (344)
T ss_pred             ceeeccCCcceeEEEEecCcccceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccc-----------------
Confidence            566788899999998865432222211112388999999999999999999999998754321                 


Q ss_pred             CCceecccccE-EEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE-E----EEeecCCCCCeEEEEEcCCC--
Q psy8430         255 ESSITLRTPVK-ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI-L----QSLTGHDEEPHILCVSSYYS--  326 (361)
Q Consensus       255 ~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~-~----~~~~~h~~~v~~~~~s~s~~--  326 (361)
                             .... ........-.+.+|+.....++++..||++.|||++.... .    .+-..|.+.+..+-+|..+.  
T Consensus       193 -------y~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lD  265 (344)
T KOG4532|consen  193 -------YIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLD  265 (344)
T ss_pred             -------eeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcce
Confidence                   1122 2222334456678999999999999999999999986432 2    22235777777755552210  


Q ss_pred             --c-ccCCCeEEEEcCCCCCCCC
Q psy8430         327 --K-VSCDLFQRIQHLDCGTSEN  346 (361)
Q Consensus       327 --~-v~~dg~i~iW~~d~~~~~~  346 (361)
                        + .-+=+.+.+-  |+++.+.
T Consensus       266 LLf~sEhfs~~hv~--D~R~~~~  286 (344)
T KOG4532|consen  266 LLFISEHFSRVHVV--DTRNYVN  286 (344)
T ss_pred             EEEEecCcceEEEE--EcccCce
Confidence              1 1145677888  8866665

>KOG1912|consensus

Probab=98.39  E-value=1e-05  Score=75.63  Aligned_cols=130  Identities=17%  Similarity=0.199  Sum_probs=100.2

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC-----------C-CEEEEEECCCcEE
Q psy8430         161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN-----------K-DLVLSASGDKSVH  228 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-----------~-~~l~s~~~d~~i~  228 (361)
                      ...-.+++|+|.| +||-|+. ..|.+-|..+-+.+..+..|...|+.|.|.|-           . -+++++...|.|.
T Consensus        15 ~sN~~A~Dw~~~G-LiAygsh-slV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIi   92 (1062)
T KOG1912|consen   15 RSNRNAADWSPSG-LIAYGSH-SLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRII   92 (1062)
T ss_pred             cccccccccCccc-eEEEecC-ceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEE
Confidence            3446678899987 7777765 47888899999999999999999999999882           1 2467777889999


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC---CC-CEEEEEeCCCcEEEeeCCCCe
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS---DG-EQVITASWDRVANLFDVETGT  304 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~-~~l~s~~~d~~v~iwd~~~~~  304 (361)
                      +||...+                          ..+..+..|..++..++|-+   +. .+|++-+.-.++.+|+..+|+
T Consensus        93 l~d~~~~--------------------------s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~  146 (1062)
T KOG1912|consen   93 LVDFVLA--------------------------SVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGE  146 (1062)
T ss_pred             EEEehhh--------------------------hhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCc
Confidence            9998655                          23455666778888888866   33 567777778999999999999


Q ss_pred             EEEEeecCCCCCeE
Q psy8430         305 ILQSLTGHDEEPHI  318 (361)
Q Consensus       305 ~~~~~~~h~~~v~~  318 (361)
                      .+-.+........+
T Consensus       147 k~Wk~~ys~~iLs~  160 (1062)
T KOG1912|consen  147 KFWKYDYSHEILSC  160 (1062)
T ss_pred             eeeccccCCcceee
Confidence            88777665555554

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.27  E-value=2.2e-05  Score=71.59  Aligned_cols=74  Identities=15%  Similarity=0.207  Sum_probs=63.9

Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecccc
Q psy8430         160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN  235 (361)
Q Consensus       160 h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~  235 (361)
                      ..+.|.|++++|+...|+.|+.||+|.+||...+....  ....-.++.++|+|+|..|++|+.-|.+.+||+.-.
T Consensus       258 L~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~--~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs  331 (545)
T PF11768_consen  258 LPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLL--AKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS  331 (545)
T ss_pred             cCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeee--eeecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence            56789999999999999999999999999987764332  235677899999999999999999999999998543

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.26  E-value=0.00085  Score=57.17  Aligned_cols=158  Identities=16%  Similarity=0.133  Sum_probs=104.0

Q ss_pred             ecCccceeeeEEee--c-cCCCeEEEEEcCCCCEEEEEeCC--------CcEEEEeCCCCeEEEEEeCCCCCeEEEEEec
Q psy8430         145 KTSLLSCYKIRSFS--G-HRDGVWDVAVRPGQPVLGSASAD--------RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP  213 (361)
Q Consensus       145 ~~~~~~~~~~~~l~--~-h~~~V~~l~~~~~~~~l~s~s~d--------~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~  213 (361)
                      .......+.+....  . .....++++++|+|++.++....        |.|..++.. ++...... .-...+.|+|+|
T Consensus        66 d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~-~~~~pNGi~~s~  143 (246)
T PF08450_consen   66 DPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVAD-GLGFPNGIAFSP  143 (246)
T ss_dssp             ETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEE-EESSEEEEEEET
T ss_pred             ecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEec-CcccccceEECC
Confidence            33444444444443  1 34668899999999988877654        457777776 55444444 456778999999


Q ss_pred             CCCEEE-EEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy8430         214 NKDLVL-SASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD  292 (361)
Q Consensus       214 ~~~~l~-s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d  292 (361)
                      +++.|+ +-+..+.|..+++.....                   ..........+....+..-.+++..+|+..++.-..
T Consensus       144 dg~~lyv~ds~~~~i~~~~~~~~~~-------------------~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~  204 (246)
T PF08450_consen  144 DGKTLYVADSFNGRIWRFDLDADGG-------------------ELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGG  204 (246)
T ss_dssp             TSSEEEEEETTTTEEEEEEEETTTC-------------------CEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETT
T ss_pred             cchheeecccccceeEEEecccccc-------------------ceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCC
Confidence            998765 556678888888753311                   011111222333333458899999999988888888


Q ss_pred             CcEEEeeCCCCeEEEEeecCCCCCeEEEEEcC
Q psy8430         293 RVANLFDVETGTILQSLTGHDEEPHILCVSSY  324 (361)
Q Consensus       293 ~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s  324 (361)
                      +.|.++|.+ |+.+..+......++++++.+.
T Consensus       205 ~~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg~  235 (246)
T PF08450_consen  205 GRIVVFDPD-GKLLREIELPVPRPTNCAFGGP  235 (246)
T ss_dssp             TEEEEEETT-SCEEEEEE-SSSSEEEEEEEST
T ss_pred             CEEEEECCC-ccEEEEEcCCCCCEEEEEEECC
Confidence            999999988 9999888876567777777655

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=98.26  E-value=0.0011  Score=59.66  Aligned_cols=181  Identities=18%  Similarity=0.174  Sum_probs=111.4

Q ss_pred             eeEEeeecCc--cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCC-CeEEE---EEe----------C
Q psy8430         139 KIVSSFKTSL--LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQT-GKCVL---QYS----------G  201 (361)
Q Consensus       139 ~~~~~~~~~~--~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~-d~~i~~wd~~~-~~~~~---~~~----------~  201 (361)
                      ..+..|..+.  .....+.+..........++++|++.+|+++.. +|+|.++++.. |....   .+.          .
T Consensus        62 g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq  141 (345)
T PF10282_consen   62 GGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQ  141 (345)
T ss_dssp             TEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTT
T ss_pred             CCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCccccc
Confidence            3444444443  455666666644555668999999999988875 89999999976 43322   221          1


Q ss_pred             CCCCeEEEEEecCCCEEEEEEC-CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe-CCCCcEEEEEE
Q psy8430         202 HSGSVNSVRFLPNKDLVLSASG-DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADW  279 (361)
Q Consensus       202 h~~~v~~v~~~~~~~~l~s~~~-d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~  279 (361)
                      ......++.|+|++++++++.. ...|.+|++......                     . .....+. ........+.|
T Consensus       142 ~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~---------------------l-~~~~~~~~~~G~GPRh~~f  199 (345)
T PF10282_consen  142 EGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGK---------------------L-TPVDSIKVPPGSGPRHLAF  199 (345)
T ss_dssp             SSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-T---------------------E-EEEEEEECSTTSSEEEEEE
T ss_pred             ccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCce---------------------E-EEeeccccccCCCCcEEEE
Confidence            2356789999999998877654 457999988654210                     0 0122222 34567888999


Q ss_pred             cCCCCEEEEEeC-CCcEEEeeCC--CCe--EEEEeecC----CC--CCeEEEEEcC--CCccc--CCCeEEEEcCCC
Q psy8430         280 LSDGEQVITASW-DRVANLFDVE--TGT--ILQSLTGH----DE--EPHILCVSSY--YSKVS--CDLFQRIQHLDC  341 (361)
Q Consensus       280 ~~~~~~l~s~~~-d~~v~iwd~~--~~~--~~~~~~~h----~~--~v~~~~~s~s--~~~v~--~dg~i~iW~~d~  341 (361)
                      +|++++++..+. ++.|.++++.  ++.  .++++...    .+  ....+.++++  +++|+  .++.|.+|++|.
T Consensus       200 ~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~  276 (345)
T PF10282_consen  200 SPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDP  276 (345)
T ss_dssp             -TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECT
T ss_pred             cCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEec
Confidence            999999877665 6779999888  443  33333321    11  2333566654  33442  577899995544

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.25  E-value=4.3e-05  Score=77.96  Aligned_cols=129  Identities=12%  Similarity=0.111  Sum_probs=85.9

Q ss_pred             eEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeC-------------C--------CCCeEEEEEecCCCEEEEE
Q psy8430         164 VWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSG-------------H--------SGSVNSVRFLPNKDLVLSA  221 (361)
Q Consensus       164 V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~-------------h--------~~~v~~v~~~~~~~~l~s~  221 (361)
                      .+.++++|+|. ++++-+.++.|++||+.++......-+             .        -.....++++++|+++++-
T Consensus       742 P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVAD  821 (1057)
T PLN02919        742 PSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVAD  821 (1057)
T ss_pred             ccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEE
Confidence            45689999988 555666679999999987643211100             0        1134688999999999999


Q ss_pred             ECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCC
Q psy8430         222 SGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  301 (361)
Q Consensus       222 ~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~  301 (361)
                      +.+++|++||..++........ ..   ....         .-....+.-.....++++++|+.+++-+.++.|++||+.
T Consensus       822 s~N~rIrviD~~tg~v~tiaG~-G~---~G~~---------dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~  888 (1057)
T PLN02919        822 SYNHKIKKLDPATKRVTTLAGT-GK---AGFK---------DGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLN  888 (1057)
T ss_pred             CCCCEEEEEECCCCeEEEEecc-CC---cCCC---------CCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECC
Confidence            9999999999876533211000 00   0000         000112233457789999999999998999999999999


Q ss_pred             CCeE
Q psy8430         302 TGTI  305 (361)
Q Consensus       302 ~~~~  305 (361)
                      +++.
T Consensus       889 ~~~~  892 (1057)
T PLN02919        889 KGEA  892 (1057)
T ss_pred             CCcc
Confidence            8765

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=98.19  E-value=0.0014  Score=56.41  Aligned_cols=138  Identities=12%  Similarity=0.106  Sum_probs=92.1

Q ss_pred             EEeeecCc--cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCC-CcEEEEeCCC-Ce---EEEEEeCCCCC--------
Q psy8430         141 VSSFKTSL--LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD-RTVRLWSTQT-GK---CVLQYSGHSGS--------  205 (361)
Q Consensus       141 ~~~~~~~~--~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d-~~i~~wd~~~-~~---~~~~~~~h~~~--------  205 (361)
                      +.++..+.  .....+-....-..+-..++++++|++++++... |.|.++-++. |.   .+..+ .|.+.        
T Consensus        66 vaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~-~h~g~~p~~rQ~~  144 (346)
T COG2706          66 VAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVV-KHTGSGPHERQES  144 (346)
T ss_pred             EEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeee-ecCCCCCCccccC
Confidence            33444444  3334443333333444789999999999998774 7899998865 42   22333 36665        


Q ss_pred             --eEEEEEecCCCEEEEEECC-CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC
Q psy8430         206 --VNSVRFLPNKDLVLSASGD-KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD  282 (361)
Q Consensus       206 --v~~v~~~~~~~~l~s~~~d-~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  282 (361)
                        +....|.|+++++++.... -.|.+|++..+.....                      ....+ ........+.|||+
T Consensus       145 ~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~----------------------~~~~v-~~G~GPRHi~FHpn  201 (346)
T COG2706         145 PHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPA----------------------DPAEV-KPGAGPRHIVFHPN  201 (346)
T ss_pred             CccceeeeCCCCCEEEEeecCCceEEEEEcccCccccc----------------------ccccc-CCCCCcceEEEcCC
Confidence              8999999999998887643 4699999875532211                      11111 34456677889999


Q ss_pred             CCEEEEEeC-CCcEEEeeCCC
Q psy8430         283 GEQVITASW-DRVANLFDVET  302 (361)
Q Consensus       283 ~~~l~s~~~-d~~v~iwd~~~  302 (361)
                      +++.++.+. +++|.+|....
T Consensus       202 ~k~aY~v~EL~stV~v~~y~~  222 (346)
T COG2706         202 GKYAYLVNELNSTVDVLEYNP  222 (346)
T ss_pred             CcEEEEEeccCCEEEEEEEcC
Confidence            999887765 78899998775

>KOG1912|consensus

Probab=98.19  E-value=5.7e-05  Score=70.83  Aligned_cols=189  Identities=16%  Similarity=0.165  Sum_probs=127.7

Q ss_pred             eecCccceeeeEEeeccCCCeEEEEEcCC------------CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEE
Q psy8430         144 FKTSLLSCYKIRSFSGHRDGVWDVAVRPG------------QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF  211 (361)
Q Consensus       144 ~~~~~~~~~~~~~l~~h~~~V~~l~~~~~------------~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~  211 (361)
                      +.-++.+.+.+..+.-|+..|+.+.|.|-            .-+||++...|.|.+||+..+..+..+..|.++|..++|
T Consensus        38 ~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W  117 (1062)
T KOG1912|consen   38 SVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCW  117 (1062)
T ss_pred             EEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheee
Confidence            34456777899999999999999999873            126778888899999999999888889989999999999


Q ss_pred             ec---CC-CEEEEEECCCcEEEEeccccccccCCCCCCCCCC-CC---CCCCC-----------------ceecccccEE
Q psy8430         212 LP---NK-DLVLSASGDKSVHIWQAVINWECLNNDNDSDLDE-SK---EPDES-----------------SITLRTPVKE  266 (361)
Q Consensus       212 ~~---~~-~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~-~~---~~~~~-----------------~~~~~~~~~~  266 (361)
                      -+   +. ..|+.-....++.+|+..+|..........+.-. ..   +....                 ......+.+.
T Consensus       118 ~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~  197 (1062)
T KOG1912|consen  118 VPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKE  197 (1062)
T ss_pred             eeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCcee
Confidence            87   33 5677777788999999999977665443333211 00   00000                 0000001111


Q ss_pred             E---eCCCC-------------------------cEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE
Q psy8430         267 L---LGHSN-------------------------VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI  318 (361)
Q Consensus       267 ~---~~~~~-------------------------~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~  318 (361)
                      +   ..|+.                         ..-.++|+|.-+.++-....+.+.++|++-..++.+..-..+.+.-
T Consensus       198 ~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpier~~akf  277 (1062)
T KOG1912|consen  198 FQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIERGGAKF  277 (1062)
T ss_pred             EEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEeccCCcce
Confidence            1   11111                         0113567887777777777888999999987887776654443322


Q ss_pred             ----------EEEEcCCCcccCCCeEEEE
Q psy8430         319 ----------LCVSSYYSKVSCDLFQRIQ  337 (361)
Q Consensus       319 ----------~~~s~s~~~v~~dg~i~iW  337 (361)
                                .++...     .||.+.||
T Consensus       278 v~vlP~~~rd~LfclH-----~nG~ltir  301 (1062)
T KOG1912|consen  278 VDVLPDPRRDALFCLH-----SNGRLTIR  301 (1062)
T ss_pred             eEeccCCCcceEEEEe-----cCCeEEEE
Confidence                      566666     89999999

>KOG1645|consensus

Probab=98.19  E-value=0.00052  Score=59.84  Aligned_cols=87  Identities=15%  Similarity=0.171  Sum_probs=73.4

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCC-CEEEEEECCCcE
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK-DLVLSASGDKSV  227 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~i  227 (361)
                      +.+...-+.+|...|.+++|+|..+ ++..++.+.+|+|.|+++...+..+..+ ..+++++|.-+. +.+..|..+|.|
T Consensus       182 ~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~V  260 (463)
T KOG1645|consen  182 DFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMV  260 (463)
T ss_pred             CcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceE
Confidence            3344556778999999999999766 8999999999999999999888888876 899999998754 567788889999


Q ss_pred             EEEecccccc
Q psy8430         228 HIWQAVINWE  237 (361)
Q Consensus       228 ~lwd~~~~~~  237 (361)
                      .+||++....
T Consensus       261 lvyD~R~~~~  270 (463)
T KOG1645|consen  261 LVYDMRQPEG  270 (463)
T ss_pred             EEEEccCCCc
Confidence            9999987643

>PRK04043 tolB translocation protein TolB; Provisional

Probab=98.19  E-value=0.00034  Score=64.30  Aligned_cols=118  Identities=10%  Similarity=0.081  Sum_probs=77.5

Q ss_pred             CCeEEEEEcCCCCE-EEEEeCC---CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEE-EEECCC--cEEEEeccc
Q psy8430         162 DGVWDVAVRPGQPV-LGSASAD---RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDK--SVHIWQAVI  234 (361)
Q Consensus       162 ~~V~~l~~~~~~~~-l~s~s~d---~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~--~i~lwd~~~  234 (361)
                      +.+....|+|||+. ++..+.+   ..|.++|+.+++...... ..+.+....|+|+|+.++ +.+.++  .|.++|+.+
T Consensus       188 ~~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~  266 (419)
T PRK04043        188 GLNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNT  266 (419)
T ss_pred             CCeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCC
Confidence            37778999999984 6654444   468899998886554433 556667788999998765 444444  566667654


Q ss_pred             cccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC-C--cEEEeeCCCCeEEE
Q psy8430         235 NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-R--VANLFDVETGTILQ  307 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-~--~v~iwd~~~~~~~~  307 (361)
                      +                           ....+..+........|+|||+.|+-.+.. +  .|++.|+.+++..+
T Consensus       267 g---------------------------~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~r  315 (419)
T PRK04043        267 K---------------------------TLTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQ  315 (419)
T ss_pred             C---------------------------cEEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEe
Confidence            4                           222333333223345799999988776642 3  57888888877643

>KOG4497|consensus

Probab=98.19  E-value=1e-05  Score=68.27  Aligned_cols=104  Identities=14%  Similarity=0.180  Sum_probs=79.7

Q ss_pred             CCeEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC-EEEEEECCCcEEEEecccccccc
Q psy8430         162 DGVWDVAVRPGQPVLGSA-SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAVINWECL  239 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~-s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~lwd~~~~~~~~  239 (361)
                      ..|.-+.|..|..+++++ ..|+.|.+|++...+--..+..-..++.+++|+|+|+ .|.+...|-+|.+|.+.+..   
T Consensus        49 dki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~---  125 (447)
T KOG4497|consen   49 DKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQK---  125 (447)
T ss_pred             HHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccce---
Confidence            567788899988765554 6788999999987776666776678899999999995 56677889999999987652   


Q ss_pred             CCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy8430         240 NNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD  292 (361)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d  292 (361)
                                              ...+.-....+..++|+|+|++.+.++.-
T Consensus       126 ------------------------~~~~~~pK~~~kg~~f~~dg~f~ai~sRr  154 (447)
T KOG4497|consen  126 ------------------------GYLLPHPKTNVKGYAFHPDGQFCAILSRR  154 (447)
T ss_pred             ------------------------eEEecccccCceeEEECCCCceeeeeecc
Confidence                                    22222234456788999999999887753

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=98.19  E-value=0.00025  Score=63.02  Aligned_cols=134  Identities=16%  Similarity=0.254  Sum_probs=103.9

Q ss_pred             eecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCC-cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE
Q psy8430         144 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADR-TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS  222 (361)
Q Consensus       144 ~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~-~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~  222 (361)
                      |......+..++.  +|.+.|.-..+..+++-++.|..|| .+-++|..+++.. .+...-+.|.+++.+|+|+.++.+.
T Consensus       344 Fi~~~~~~~~iqv--~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~k-r~e~~lg~I~av~vs~dGK~~vvaN  420 (668)
T COG4946         344 FIMRPWDGYSIQV--GKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVK-RIEKDLGNIEAVKVSPDGKKVVVAN  420 (668)
T ss_pred             EEECCCCCeeEEc--CCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEE-EeeCCccceEEEEEcCCCcEEEEEc
Confidence            3333344444443  7888899999998888999999999 8999999887744 4555778999999999999999988


Q ss_pred             CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEeCCC----cEEE
Q psy8430         223 GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASWDR----VANL  297 (361)
Q Consensus       223 ~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~----~v~i  297 (361)
                      ....+.+.|+.++.                           +..+ ....+-|+...|||++++++-+--+|    .|++
T Consensus       421 dr~el~vididngn---------------------------v~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Ikl  473 (668)
T COG4946         421 DRFELWVIDIDNGN---------------------------VRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKL  473 (668)
T ss_pred             CceEEEEEEecCCC---------------------------eeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEE
Confidence            88888888988772                           2222 23456799999999999999876554    5889


Q ss_pred             eeCCCCeEEE
Q psy8430         298 FDVETGTILQ  307 (361)
Q Consensus       298 wd~~~~~~~~  307 (361)
                      +|+..++...
T Consensus       474 ydm~~~Kiy~  483 (668)
T COG4946         474 YDMDGGKIYD  483 (668)
T ss_pred             EecCCCeEEE
Confidence            9999877654

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=98.17  E-value=0.0008  Score=60.43  Aligned_cols=165  Identities=16%  Similarity=0.176  Sum_probs=98.0

Q ss_pred             CCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCe--E--EEEEe-CCCCCeEEEEEecCCCEEEEEE-CCCcEEEEeccc
Q psy8430         162 DGVWDVAVRPGQPVLGSASA-DRTVRLWSTQTGK--C--VLQYS-GHSGSVNSVRFLPNKDLVLSAS-GDKSVHIWQAVI  234 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~-d~~i~~wd~~~~~--~--~~~~~-~h~~~v~~v~~~~~~~~l~s~~-~d~~i~lwd~~~  234 (361)
                      ....++.|+|+|+++++... ...|.+|++....  .  ...+. ........++|+|+++++.... .++.|.++++..
T Consensus       144 ~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~  223 (345)
T PF10282_consen  144 PHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDP  223 (345)
T ss_dssp             TCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEET
T ss_pred             ccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecc
Confidence            55789999999998877643 3479999987653  2  22222 3567789999999999876554 578899998862


Q ss_pred             cccccCCCCCCCCCCCCCCCCCceecccccEEEe-C--CCCcEEEEEEcCCCCEEEEEeC-CCcEEEeeCC--CCe--EE
Q psy8430         235 NWECLNNDNDSDLDESKEPDESSITLRTPVKELL-G--HSNVVIAADWLSDGEQVITASW-DRVANLFDVE--TGT--IL  306 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd~~--~~~--~~  306 (361)
                      ...                   .......+..+. +  .......+.++|+|++|+++.. .+.|.+|++.  +|.  .+
T Consensus       224 ~~g-------------------~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~  284 (345)
T PF10282_consen  224 SDG-------------------SLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLV  284 (345)
T ss_dssp             TTT-------------------EEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEE
T ss_pred             cCC-------------------ceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEE
Confidence            210                   000001111111 1  1236888999999999887664 5779999983  343  33


Q ss_pred             EEeecCCCCCeEEEEEcC--CCcc--cCCCeEEEEcCCCCCCC
Q psy8430         307 QSLTGHDEEPHILCVSSY--YSKV--SCDLFQRIQHLDCGTSE  345 (361)
Q Consensus       307 ~~~~~h~~~v~~~~~s~s--~~~v--~~dg~i~iW~~d~~~~~  345 (361)
                      ..+.........+.++.+  +++|  -.++.|.+|++|..++.
T Consensus       285 ~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~  327 (345)
T PF10282_consen  285 QTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGK  327 (345)
T ss_dssp             EEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTE
T ss_pred             EEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCc
Confidence            344332232344444333  2222  17889999977764543

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG2041|consensus

Probab=98.14  E-value=2e-05  Score=73.19  Aligned_cols=117  Identities=15%  Similarity=0.145  Sum_probs=91.2

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe---------------EEEEEeCCCCCeEEEEEecCCCEEEEEECCC
Q psy8430         161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK---------------CVLQYSGHSGSVNSVRFLPNKDLVLSASGDK  225 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~---------------~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~  225 (361)
                      .....|++|+-...+|++||.||.+++-.+.+..               .-+++.||...|..+.|+...+.|-|+..+|
T Consensus        14 nvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~G   93 (1189)
T KOG2041|consen   14 NVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSG   93 (1189)
T ss_pred             CceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCc
Confidence            3568899999999999999999999998775421               1245679999999999999999999999999


Q ss_pred             cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCC
Q psy8430         226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  301 (361)
Q Consensus       226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~  301 (361)
                      .|.+|-+-++.                        +.....-....+.|.+++|+.+|..+...-.||.|.+=.++
T Consensus        94 lIiVWmlykgs------------------------W~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvd  145 (1189)
T KOG2041|consen   94 LIIVWMLYKGS------------------------WCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVD  145 (1189)
T ss_pred             eEEEEeeeccc------------------------HHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeec
Confidence            99999764431                        11111112245678999999999999998889888765554

>KOG1275|consensus

Probab=98.13  E-value=2e-05  Score=75.09  Aligned_cols=143  Identities=18%  Similarity=0.173  Sum_probs=103.4

Q ss_pred             eeeeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeC---------CCcEEEEeCCCCeEEEEEeC
Q psy8430         131 NKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASA---------DRTVRLWSTQTGKCVLQYSG  201 (361)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~---------d~~i~~wd~~~~~~~~~~~~  201 (361)
                      ..+.+++...+  +.-+..+++.++++..|++.|.++...  |++|++||.         |..|+|||++.-+.+..+.-
T Consensus       189 ~lf~G~t~G~V--~LrD~~s~~~iht~~aHs~siSDfDv~--GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~  264 (1118)
T KOG1275|consen  189 NLFCGDTRGTV--FLRDPNSFETIHTFDAHSGSISDFDVQ--GNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQF  264 (1118)
T ss_pred             EEEeecccceE--EeecCCcCceeeeeeccccceeeeecc--CCeEEEeecccccccccccchhhhhhhhhhhccCCccc
Confidence            34455555544  344557889999999999999776665  889999986         55689999988776666664


Q ss_pred             CCCCeEEEEEecC-CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEc
Q psy8430         202 HSGSVNSVRFLPN-KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL  280 (361)
Q Consensus       202 h~~~v~~v~~~~~-~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  280 (361)
                      +.++ .-+.|+|. ...++.++..|.+.+-|..+-..                      ....+..+....+.+.++.++
T Consensus       265 ~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsN----------------------P~~~~~~v~p~~s~i~~fDiS  321 (1118)
T KOG1275|consen  265 PYGP-QFLRFHPSLTTRLAVTSQSGQFQFVDTATLSN----------------------PPAGVKMVNPNGSGISAFDIS  321 (1118)
T ss_pred             ccCc-hhhhhcccccceEEEEecccceeeccccccCC----------------------CccceeEEccCCCcceeEEec
Confidence            5444 56788885 45678888899999888432110                      001233344445669999999


Q ss_pred             CCCCEEEEEeCCCcEEEeeC
Q psy8430         281 SDGEQVITASWDRVANLFDV  300 (361)
Q Consensus       281 ~~~~~l~s~~~d~~v~iwd~  300 (361)
                      ++|+.++.|..+|.|.+|.-
T Consensus       322 sn~~alafgd~~g~v~~wa~  341 (1118)
T KOG1275|consen  322 SNGDALAFGDHEGHVNLWAD  341 (1118)
T ss_pred             CCCceEEEecccCcEeeecC
Confidence            99999999999999999973

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.07  E-value=6.9e-05  Score=62.97  Aligned_cols=142  Identities=16%  Similarity=0.291  Sum_probs=90.7

Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe-----EEEEEeCCC------------CCeEEEEEecCCC--EEEE
Q psy8430         160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-----CVLQYSGHS------------GSVNSVRFLPNKD--LVLS  220 (361)
Q Consensus       160 h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~-----~~~~~~~h~------------~~v~~v~~~~~~~--~l~s  220 (361)
                      ....|+++.|...|.++++|...|.|.+|.-....     ....|++|.            ..|..|.|..++.  .|+.
T Consensus        25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl  104 (460)
T COG5170          25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL  104 (460)
T ss_pred             ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence            34679999999999999999999999999865432     233355554            4678889987554  4777


Q ss_pred             EECCCcEEEEecccccccc--CCCCCCCCCC--------------CCCCCCCceecccccEEE-eCCCCcEEEEEEcCCC
Q psy8430         221 ASGDKSVHIWQAVINWECL--NNDNDSDLDE--------------SKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDG  283 (361)
Q Consensus       221 ~~~d~~i~lwd~~~~~~~~--~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~  283 (361)
                      .+.|++|++|.+.....-.  ..........              +............|.+.. ..|.-.+.+++|+.+.
T Consensus       105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~  184 (460)
T COG5170         105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDK  184 (460)
T ss_pred             ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCch
Confidence            8899999999986552211  1000000000              000000011111222223 4677889999999998


Q ss_pred             CEEEEEeCCCcEEEeeCCC
Q psy8430         284 EQVITASWDRVANLFDVET  302 (361)
Q Consensus       284 ~~l~s~~~d~~v~iwd~~~  302 (361)
                      ..++++ .|=.|.+|++.-
T Consensus       185 et~lSa-DdLrINLWnl~i  202 (460)
T COG5170         185 ETLLSA-DDLRINLWNLEI  202 (460)
T ss_pred             heeeec-cceeeeeccccc
Confidence            888877 467899998874

>KOG4190|consensus

Probab=98.06  E-value=5.3e-06  Score=74.63  Aligned_cols=120  Identities=18%  Similarity=0.294  Sum_probs=87.9

Q ss_pred             EEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEE
Q psy8430         196 VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVI  275 (361)
Q Consensus       196 ~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  275 (361)
                      +..|.||...|..++-..+.+.|++++.|++|++|.++....                   ......+..++..|..+|.
T Consensus       728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD-------------------~~~tsaCQfTY~aHkk~i~  788 (1034)
T KOG4190|consen  728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGD-------------------EIGTSACQFTYQAHKKPIH  788 (1034)
T ss_pred             eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccC-------------------ccccceeeeEhhhccCccc
Confidence            456779999999998888888999999999999999874321                   1222346677889999999


Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec---C--CCCCeE--------EEEEcCCCcccCCCeEEEEcCCCC
Q psy8430         276 AADWLSDGEQVITASWDRVANLFDVETGTILQSLTG---H--DEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCG  342 (361)
Q Consensus       276 ~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~---h--~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~  342 (361)
                      .+.|-.+.++++++  ||.|++||.--|+.+..+..   |  .+.|.+        +++.++     ...+|+++  |.+
T Consensus       789 ~igfL~~lr~i~Sc--D~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcs-----aeSTVKl~--DaR  859 (1034)
T KOG4190|consen  789 DIGFLADLRSIASC--DGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCS-----AESTVKLF--DAR  859 (1034)
T ss_pred             ceeeeeccceeeec--cCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeecc-----chhhheee--ecc
Confidence            99998888777654  78999999877776653321   1  112222        455567     78889998  884


Q ss_pred             C
Q psy8430         343 T  343 (361)
Q Consensus       343 ~  343 (361)
                      .
T Consensus       860 s  860 (1034)
T KOG4190|consen  860 S  860 (1034)
T ss_pred             c
Confidence            3

>smart00320 WD40 WD40 repeats

Probab=98.06  E-value=1.5e-05  Score=45.36  Aligned_cols=38  Identities=37%  Similarity=0.597  Sum_probs=34.6

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWS  189 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd  189 (361)
                      +++..+..|...|.++.|++++..+++++.|+.+++|+
T Consensus         3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            45677789999999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG2066|consensus

Probab=98.02  E-value=3.1e-05  Score=72.80  Aligned_cols=146  Identities=18%  Similarity=0.110  Sum_probs=104.7

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccC
Q psy8430         161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLN  240 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~  240 (361)
                      ...++|++++  +..|+-|..+|.|++.+.. |.+ .+...|...      .-+|.+++||+.||+|.|..+-+..+.  
T Consensus        39 ~D~is~~av~--~~~~~~GtH~g~v~~~~~~-~~~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~--  106 (846)
T KOG2066|consen   39 NDAISCCAVH--DKFFALGTHRGAVYLTTCQ-GNP-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEI--  106 (846)
T ss_pred             hhHHHHHHhh--cceeeeccccceEEEEecC-Ccc-ccccccccc------ccCCceEEEecCCCcEEEeeccCCccc--
Confidence            4567777777  5689999999999999975 333 333335544      558999999999999999876554221  


Q ss_pred             CCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC-----CCEEEEEeCCCcEEEeeCCC-CeEEE-EeecCC
Q psy8430         241 NDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD-----GEQVITASWDRVANLFDVET-GTILQ-SLTGHD  313 (361)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~s~~~d~~v~iwd~~~-~~~~~-~~~~h~  313 (361)
                                              .. .....++.+++++|+     .+.+++|+..| +.++.-+- |.... .+..-.
T Consensus       107 ------------------------~~-~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~e  160 (846)
T KOG2066|consen  107 ------------------------TQ-YDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGE  160 (846)
T ss_pred             ------------------------ee-EecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCc
Confidence                                    11 123457888999996     67899999988 77765331 11111 355567


Q ss_pred             CCCeEEEEEcCCCcccCCCeEEEEcCCCCCCCC
Q psy8430         314 EEPHILCVSSYYSKVSCDLFQRIQHLDCGTSEN  346 (361)
Q Consensus       314 ~~v~~~~~s~s~~~v~~dg~i~iW~~d~~~~~~  346 (361)
                      ++|.++.+-|++++...|--|+||  |+.+++.
T Consensus       161 G~I~~i~W~g~lIAWand~Gv~vy--d~~~~~~  191 (846)
T KOG2066|consen  161 GPIHSIKWRGNLIAWANDDGVKVY--DTPTRQR  191 (846)
T ss_pred             cceEEEEecCcEEEEecCCCcEEE--eccccce
Confidence            889998888888888888889999  8755443

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=98.01  E-value=0.00018  Score=63.91  Aligned_cols=84  Identities=13%  Similarity=0.157  Sum_probs=71.7

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCC----cE
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK----SV  227 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~----~i  227 (361)
                      -.++.+...-+.|.++..+++|.+++.+.....+.+.|+++|.....-+...+-|+.+.|+|+++++|-+--+|    .|
T Consensus       392 ~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~I  471 (668)
T COG4946         392 GEVKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSI  471 (668)
T ss_pred             ceEEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeE
Confidence            45566677789999999999999999998889999999999987666666778999999999999999877665    68


Q ss_pred             EEEecccc
Q psy8430         228 HIWQAVIN  235 (361)
Q Consensus       228 ~lwd~~~~  235 (361)
                      +++|+..+
T Consensus       472 klydm~~~  479 (668)
T COG4946         472 KLYDMDGG  479 (668)
T ss_pred             EEEecCCC
Confidence            99998765

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=97.93  E-value=0.00081  Score=57.73  Aligned_cols=151  Identities=13%  Similarity=0.123  Sum_probs=92.1

Q ss_pred             EEeeccCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEeCC-CCeEEEEEeCCCCCeEEEEEecCCCEEEEEE------
Q psy8430         155 RSFSGHRDGVWDVAVRPGQPVLGSASA-----DRTVRLWSTQ-TGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS------  222 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~~~~l~s~s~-----d~~i~~wd~~-~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~------  222 (361)
                      +.|.||      -.|++||++|++.=.     .|.|-|||.. ..+.+.+|..|.-.-..+.+.|++..|+.+-      
T Consensus        50 RHFyGH------g~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Th  123 (305)
T PF07433_consen   50 RHFYGH------GVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETH  123 (305)
T ss_pred             CEEecC------EEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccC
Confidence            455566      569999999998744     4789999998 5588999998888889999999997777652      


Q ss_pred             ------------CCCcEEEEeccccccccCCCCC--CCCCCC---------------CCCCC--------CceecccccE
Q psy8430         223 ------------GDKSVHIWQAVINWECLNNDND--SDLDES---------------KEPDE--------SSITLRTPVK  265 (361)
Q Consensus       223 ------------~d~~i~lwd~~~~~~~~~~~~~--~~~~~~---------------~~~~~--------~~~~~~~~~~  265 (361)
                                  .+-.+.+-|..++..+......  ....+.               .+...        ..........
T Consensus       124 pd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~  203 (305)
T PF07433_consen  124 PDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGALR  203 (305)
T ss_pred             cccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCcce
Confidence                        1223333444444322221100  000000               00000        0000000111


Q ss_pred             EE-------eCCCCcEEEEEEcCCCCEEEE-EeCCCcEEEeeCCCCeEEEEeec
Q psy8430         266 EL-------LGHSNVVIAADWLSDGEQVIT-ASWDRVANLFDVETGTILQSLTG  311 (361)
Q Consensus       266 ~~-------~~~~~~v~~~~~~~~~~~l~s-~~~d~~v~iwd~~~~~~~~~~~~  311 (361)
                      .+       ..-.+.+-++++++++.++++ +-..+.+.+||..+++.+....-
T Consensus       204 ~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l  257 (305)
T PF07433_consen  204 LLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPL  257 (305)
T ss_pred             eccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeecccc
Confidence            11       123467889999999987754 55567799999999998876653

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=97.93  E-value=4.5e-05  Score=64.08  Aligned_cols=143  Identities=14%  Similarity=0.231  Sum_probs=95.3

Q ss_pred             eccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC---eEEEEEeCCC-----CCeEEEEEecCCC-EEEEEECCCcEE
Q psy8430         158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG---KCVLQYSGHS-----GSVNSVRFLPNKD-LVLSASGDKSVH  228 (361)
Q Consensus       158 ~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~---~~~~~~~~h~-----~~v~~v~~~~~~~-~l~s~~~d~~i~  228 (361)
                      ..|.-.|.++.|+.|...++++ .|-.|.+|+++-.   -.+..++.|.     ..|++..|+|... .|.-.+..|.|+
T Consensus       169 NaH~yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ik  247 (460)
T COG5170         169 NAHPYHINSISFNSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIK  247 (460)
T ss_pred             ccceeEeeeeeecCchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEE
Confidence            4788889999999999888775 5778999998643   2344445553     4688999999654 455677789999


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC-eEEE
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG-TILQ  307 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~-~~~~  307 (361)
                      +-|++....+.......+....          .-...-+.+-...|..+.|+++|+|+++-+. -+|+|||++.. .++.
T Consensus       248 l~DlRq~alcdn~~klfe~~~D----------~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pik  316 (460)
T COG5170         248 LNDLRQSALCDNSKKLFELTID----------GVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIK  316 (460)
T ss_pred             ehhhhhhhhccCchhhhhhccC----------cccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCce
Confidence            9999866444322111100000          0001111223456788999999999998876 78999999854 5666


Q ss_pred             EeecC
Q psy8430         308 SLTGH  312 (361)
Q Consensus       308 ~~~~h  312 (361)
                      ++.-|
T Consensus       317 Ti~~h  321 (460)
T COG5170         317 TIPMH  321 (460)
T ss_pred             eechH
Confidence            66444

>PRK04043 tolB translocation protein TolB; Provisional

Probab=97.88  E-value=0.004  Score=57.31  Aligned_cols=121  Identities=13%  Similarity=0.085  Sum_probs=73.9

Q ss_pred             ccCCCeEEEEEcCCCCEEEE-EeCC--CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE-CCC--cEEEEec
Q psy8430         159 GHRDGVWDVAVRPGQPVLGS-ASAD--RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GDK--SVHIWQA  232 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s-~s~d--~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~--~i~lwd~  232 (361)
                      ...+.+....|+|||..|+. .+.+  ..|.++|+.++... .+..+........|+|+|+.++-.+ ..+  .|.+.|+
T Consensus       230 ~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~-~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl  308 (419)
T PRK04043        230 SSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLT-QITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKL  308 (419)
T ss_pred             cCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEE-EcccCCCccCccEECCCCCEEEEEECCCCCceEEEEEC
Confidence            34566667889999986554 4334  46777888777643 3333333344568999998766555 334  4666666


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC---------CcEEEeeCCCC
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD---------RVANLFDVETG  303 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---------~~v~iwd~~~~  303 (361)
                      .++.                           ...+......  ...|+|+|++++..+..         ..|.+.|+.++
T Consensus       309 ~~g~---------------------------~~rlt~~g~~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g  359 (419)
T PRK04043        309 NSGS---------------------------VEQVVFHGKN--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSD  359 (419)
T ss_pred             CCCC---------------------------eEeCccCCCc--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCC
Confidence            5441                           1111111111  23799999999877654         25788898877


Q ss_pred             eEEEEee
Q psy8430         304 TILQSLT  310 (361)
Q Consensus       304 ~~~~~~~  310 (361)
                      .. ..+.
T Consensus       360 ~~-~~LT  365 (419)
T PRK04043        360 YI-RRLT  365 (419)
T ss_pred             Ce-EECC
Confidence            64 3343

>KOG1645|consensus

Probab=97.83  E-value=0.00038  Score=60.68  Aligned_cols=93  Identities=15%  Similarity=0.190  Sum_probs=74.0

Q ss_pred             EEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC-EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccc
Q psy8430         185 VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTP  263 (361)
Q Consensus       185 i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (361)
                      +++.+..+-+.+..+.+|...|.+++|+|..+ ++..++.+.+|+|.|+.+..                          .
T Consensus       175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~--------------------------~  228 (463)
T KOG1645|consen  175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSC--------------------------V  228 (463)
T ss_pred             eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccce--------------------------e
Confidence            66666666566666778899999999999877 67889999999999997662                          3


Q ss_pred             cEEEeCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEeeCCCCe
Q psy8430         264 VKELLGHSNVVIAADWLSD-GEQVITASWDRVANLFDVETGT  304 (361)
Q Consensus       264 ~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~v~iwd~~~~~  304 (361)
                      +..+..+ ..+++++|.-+ ..++++|-..|.|.|||++..+
T Consensus       229 vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~  269 (463)
T KOG1645|consen  229 VSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPE  269 (463)
T ss_pred             eeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccCCC
Confidence            4445555 78999999874 4678899999999999998543

>KOG0882|consensus

Probab=97.82  E-value=3.4e-05  Score=67.84  Aligned_cols=149  Identities=17%  Similarity=0.213  Sum_probs=103.3

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCe----------------------EE-----------
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQTGK----------------------CV-----------  196 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~-d~~i~~wd~~~~~----------------------~~-----------  196 (361)
                      -+.+..+..|.+.|.+++.+-+|-++.|++. |..++++|+.+-.                      .+           
T Consensus        43 vEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg  122 (558)
T KOG0882|consen   43 VEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSG  122 (558)
T ss_pred             eeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccccCCCceEEecCCCCeeeeEEeecccCC
Confidence            3566677788888888888888888888777 8888888775210                      00           


Q ss_pred             --------------EEE-eCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecc
Q psy8430         197 --------------LQY-SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLR  261 (361)
Q Consensus       197 --------------~~~-~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (361)
                                    ..+ .-|..+|.++.++|.+..+++....|.|.-|......+-+...           -.-.....
T Consensus       123 ~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~-----------l~~~~K~e  191 (558)
T KOG0882|consen  123 KIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTN-----------LNFELKHE  191 (558)
T ss_pred             CcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCcccc-----------cccccccc
Confidence                          001 2377899999999999999999889999999764210000000           00001111


Q ss_pred             cccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430         262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       262 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~  310 (361)
                      +.+..+........++.|+|+|..+.+-+.|..|+++++.+|+.++.+.
T Consensus       192 TdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiD  240 (558)
T KOG0882|consen  192 TDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEID  240 (558)
T ss_pred             chhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhh
Confidence            2223333345677889999999999999999999999999998776653

>smart00320 WD40 WD40 repeats

Probab=97.80  E-value=8.8e-05  Score=42.02  Aligned_cols=39  Identities=36%  Similarity=0.721  Sum_probs=34.6

Q ss_pred             CeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430         193 GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       193 ~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd  231 (361)
                      ++++..+..|...|.++.|++.+..+++++.|+.+++|+
T Consensus         2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            355677778999999999999999999999999999995

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=97.79  E-value=0.00045  Score=61.94  Aligned_cols=114  Identities=20%  Similarity=0.254  Sum_probs=82.9

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEe--CCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECC---CcEEEEecc
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSAS--ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD---KSVHIWQAV  233 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s--~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d---~~i~lwd~~  233 (361)
                      +-.++|...+|+|.++.+++.+  .+-++.++|++.. ..  +......=+.+.|+|.+++++.++.|   |.+.+||..
T Consensus       272 ~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~--~~~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~  348 (561)
T COG5354         272 DLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LR--FYFPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPA  348 (561)
T ss_pred             cccccceeeeecccCCceeEEecccccceeecccccc-eE--EecCCcccccccccCcccEEEEecCCccccceEEeccC
Confidence            4579999999999888666554  6788999999754 33  33345556678899999999998876   579999875


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe------CCCcEEEeeCCC
Q psy8430         234 INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS------WDRVANLFDVET  302 (361)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~------~d~~v~iwd~~~  302 (361)
                      ....                         .+..+.+  ....-+.|+|+|.++.+..      .|..|.|||+..
T Consensus       349 ~rf~-------------------------~~~~~~~--~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g  396 (561)
T COG5354         349 GRFK-------------------------VAGAFNG--LNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYG  396 (561)
T ss_pred             CceE-------------------------EEEEeec--CCceEeeccCCceEEEecCCCcccccCcceEEEEecC
Confidence            4321                         2223333  3445578999999988764      478899999863

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=97.76  E-value=0.0066  Score=52.45  Aligned_cols=159  Identities=15%  Similarity=0.191  Sum_probs=102.3

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCC---CcEEEEeCCC--CeE--EEEEeCCCCCeEEEEEecCCCEEEEEEC-CCcEEEE
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASAD---RTVRLWSTQT--GKC--VLQYSGHSGSVNSVRFLPNKDLVLSASG-DKSVHIW  230 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~d---~~i~~wd~~~--~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~~i~lw  230 (361)
                      .+.+.++-|+|+|+++.|.++..+   |.|-.|.++.  |+.  +........+-+.+++++++++++++.. -|.|.++
T Consensus        37 ~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~  116 (346)
T COG2706          37 AELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVY  116 (346)
T ss_pred             cccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEE
Confidence            567888999999999988888654   6777777654  543  2222223445589999999999998886 4789999


Q ss_pred             eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCc----------EEEEEEcCCCCEEEEEeC-CCcEEEee
Q psy8430         231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNV----------VIAADWLSDGEQVITASW-DRVANLFD  299 (361)
Q Consensus       231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------v~~~~~~~~~~~l~s~~~-d~~v~iwd  299 (361)
                      .++....+.                       .......|.+.          +-...+.|+++++++.+- --.|.+|+
T Consensus       117 p~~~dG~l~-----------------------~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~  173 (346)
T COG2706         117 PLQADGSLQ-----------------------PVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYD  173 (346)
T ss_pred             EcccCCccc-----------------------cceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEE
Confidence            886531111                       11111122222          677889999999988764 24588999


Q ss_pred             CCCCeEEEEee---cCCCCCeEEEEEcC--CCccc--CCCeEEEEcCC
Q psy8430         300 VETGTILQSLT---GHDEEPHILCVSSY--YSKVS--CDLFQRIQHLD  340 (361)
Q Consensus       300 ~~~~~~~~~~~---~h~~~v~~~~~s~s--~~~v~--~dg~i~iW~~d  340 (361)
                      +..|.....-.   ........++|.++  ++|+.  -+++|-+|..|
T Consensus       174 ~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~  221 (346)
T COG2706         174 LDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYN  221 (346)
T ss_pred             cccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEc
Confidence            99776543221   12223334666655  33332  48899999333

>KOG3621|consensus

Probab=97.76  E-value=0.0002  Score=66.67  Aligned_cols=121  Identities=17%  Similarity=0.171  Sum_probs=88.0

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEE-EEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccC
Q psy8430         162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV-LQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLN  240 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~-~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~  240 (361)
                      ..|.--+++..+.+++.|+.-|.+.+|+-..++.. ....+..+.+..+..+++..++|.|+..|.|.++.++....-..
T Consensus        34 ~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~  113 (726)
T KOG3621|consen   34 ARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDL  113 (726)
T ss_pred             ceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcc
Confidence            33444456777889999999999999998776533 23334556666777888888899999999999998765321100


Q ss_pred             CCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC
Q psy8430         241 NDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET  302 (361)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~  302 (361)
                                        ..  ...--..|...|++++|++++..+++|...|+|..-.+.+
T Consensus       114 ------------------~~--~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s  155 (726)
T KOG3621|consen  114 ------------------DY--VTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS  155 (726)
T ss_pred             ------------------ee--eccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence                              00  0001112788999999999999999999999998877766

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=97.75  E-value=0.0016  Score=59.37  Aligned_cols=129  Identities=13%  Similarity=0.058  Sum_probs=84.1

Q ss_pred             CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCC
Q psy8430         173 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKE  252 (361)
Q Consensus       173 ~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      +..++.++.+|.+..||..+|+.+.... .. ......  ..+..++.++.||.+..+|..++......           
T Consensus       241 ~~~vy~~~~~g~l~a~d~~tG~~~W~~~-~~-~~~~p~--~~~~~vyv~~~~G~l~~~d~~tG~~~W~~-----------  305 (377)
T TIGR03300       241 GGQVYAVSYQGRVAALDLRSGRVLWKRD-AS-SYQGPA--VDDNRLYVTDADGVVVALDRRSGSELWKN-----------  305 (377)
T ss_pred             CCEEEEEEcCCEEEEEECCCCcEEEeec-cC-CccCce--EeCCEEEEECCCCeEEEEECCCCcEEEcc-----------
Confidence            4577788889999999999998765544 11 111222  24667888889999999998776432110           


Q ss_pred             CCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE-------EEEEcCC
Q psy8430         253 PDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI-------LCVSSYY  325 (361)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~-------~~~s~s~  325 (361)
                                  ..+.  .....+...  .+..+++++.+|.++++|..+|+.+.++..+...+..       .++.++ 
T Consensus       306 ------------~~~~--~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~~~~l~v~~-  368 (377)
T TIGR03300       306 ------------DELK--YRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFVARLKTDGSGIASPPVVVGDGLLVQT-  368 (377)
T ss_pred             ------------cccc--CCccccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCccccCCEEECCEEEEEe-
Confidence                        0000  011111122  4678999999999999999999999988866543332       333334 


Q ss_pred             CcccCCCeEEEE
Q psy8430         326 SKVSCDLFQRIQ  337 (361)
Q Consensus       326 ~~v~~dg~i~iW  337 (361)
                          .||.|..+
T Consensus       369 ----~dG~l~~~  376 (377)
T TIGR03300       369 ----RDGDLYAF  376 (377)
T ss_pred             ----CCceEEEe
Confidence                78877655

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG1275|consensus

Probab=97.70  E-value=0.00065  Score=65.17  Aligned_cols=111  Identities=14%  Similarity=0.158  Sum_probs=85.3

Q ss_pred             CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCC
Q psy8430         173 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKE  252 (361)
Q Consensus       173 ~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      +..++-|+....+..+|+.+.+..+...-..+.|.-++.  +++.+.+|...|+|.+-|.++.                 
T Consensus       147 ~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~-----------------  207 (1118)
T KOG1275|consen  147 PSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSF-----------------  207 (1118)
T ss_pred             CcceeecchhhheeeeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCcC-----------------
Confidence            446667777777888899888766665544445666555  5788999999999999998765                 


Q ss_pred             CCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC---------CCcEEEeeCCCCeEEEEeecCC
Q psy8430         253 PDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW---------DRVANLFDVETGTILQSLTGHD  313 (361)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---------d~~v~iwd~~~~~~~~~~~~h~  313 (361)
                               +.++++..|++.+..+..  .|+.|++++.         |..|+|||+|+.+.+..+.-+-
T Consensus       208 ---------~~iht~~aHs~siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~  266 (1118)
T KOG1275|consen  208 ---------ETIHTFDAHSGSISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPY  266 (1118)
T ss_pred             ---------ceeeeeeccccceeeeec--cCCeEEEeecccccccccccchhhhhhhhhhhccCCccccc
Confidence                     478999999999987666  7999999875         5678999999887766554433

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.67  E-value=0.0096  Score=42.89  Aligned_cols=65  Identities=17%  Similarity=0.157  Sum_probs=49.4

Q ss_pred             eEEEEEc---CCC-CEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430         164 VWDVAVR---PGQ-PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       164 V~~l~~~---~~~-~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~  232 (361)
                      |+++++.   .+| +-|+.||.|..|++|+-  ...+..+. ..+.|.+++-... ..|+.+..+|+|-+|+-
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~--~e~~~Ei~-e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~   70 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKG--DEIVAEIT-ETDKVTSLCSLGG-GRFAYALANGTVGVYDR   70 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeC--CcEEEEEe-cccceEEEEEcCC-CEEEEEecCCEEEEEeC
Confidence            5566644   444 48999999999999984  45666666 5677888877654 67999999999999874

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=97.65  E-value=0.0025  Score=64.21  Aligned_cols=119  Identities=20%  Similarity=0.223  Sum_probs=84.5

Q ss_pred             cCCCeEEEEEcCCCCEEEEEeC---C---CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC---CCcEEEE
Q psy8430         160 HRDGVWDVAVRPGQPVLGSASA---D---RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG---DKSVHIW  230 (361)
Q Consensus       160 h~~~V~~l~~~~~~~~l~s~s~---d---~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~---d~~i~lw  230 (361)
                      +...-..++|-.||.++|+.+.   .   +.+++|+-+ |....+...-.+--.+++|.|.|+++|+...   ...|.+|
T Consensus       208 ~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFf  286 (928)
T PF04762_consen  208 WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFF  286 (928)
T ss_pred             cCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEE
Confidence            3345568999999999999875   2   579999965 7655555545555668899999999998865   3457777


Q ss_pred             eccccccccCCCCCCCCCCCCCCCCCceecccccEEE--eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE
Q psy8430         231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL--LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI  305 (361)
Q Consensus       231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~  305 (361)
                      .-+.-                         +.--..+  ......|..++|++++..|+....|. |.+|-..+..-
T Consensus       287 ErNGL-------------------------rhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHW  337 (928)
T PF04762_consen  287 ERNGL-------------------------RHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHW  337 (928)
T ss_pred             ecCCc-------------------------EeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEE
Confidence            53211                         1111222  23456789999999999999987655 99999887653

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=97.64  E-value=0.0087  Score=53.23  Aligned_cols=101  Identities=11%  Similarity=0.089  Sum_probs=76.5

Q ss_pred             CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC----------CCcEEEEeccccccccCCCCCCCCCCCCC
Q psy8430         183 RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG----------DKSVHIWQAVINWECLNNDNDSDLDESKE  252 (361)
Q Consensus       183 ~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~----------d~~i~lwd~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      ++|.+.|..+++.+.++..-.. -..+ ++|+++.++.+..          +..|.+||+.+.+.               
T Consensus        27 ~~v~ViD~~~~~v~g~i~~G~~-P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~---------------   89 (352)
T TIGR02658        27 TQVYTIDGEAGRVLGMTDGGFL-PNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLP---------------   89 (352)
T ss_pred             ceEEEEECCCCEEEEEEEccCC-Ccee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcE---------------
Confidence            8999999999998888874322 2334 9999998877655          77999999987743               


Q ss_pred             CCCCceecccccEEEeC-------CCCcEEEEEEcCCCCEEEEEe-C-CCcEEEeeCCCCeEEEEeec
Q psy8430         253 PDESSITLRTPVKELLG-------HSNVVIAADWLSDGEQVITAS-W-DRVANLFDVETGTILQSLTG  311 (361)
Q Consensus       253 ~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~s~~-~-d~~v~iwd~~~~~~~~~~~~  311 (361)
                                 +..+..       .......++++|+|++++... . +..|.+.|+.+++.+..+..
T Consensus        90 -----------~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~v  146 (352)
T TIGR02658        90 -----------IADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDV  146 (352)
T ss_pred             -----------EeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeC
Confidence                       222221       122344678999999999876 3 68899999999999998875

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG2314|consensus

Probab=97.63  E-value=0.0013  Score=59.71  Aligned_cols=112  Identities=13%  Similarity=0.196  Sum_probs=80.1

Q ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC----------C-CcEEEEecc
Q psy8430         165 WDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG----------D-KSVHIWQAV  233 (361)
Q Consensus       165 ~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~----------d-~~i~lwd~~  233 (361)
                      +-+.|||-|.+|+|-..-| |.+|--.+-..++.|. | ..|.-+.|||..++|+|-+.          + ..++|||+.
T Consensus       214 tyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~-H-p~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~  290 (698)
T KOG2314|consen  214 TYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFY-H-PGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIA  290 (698)
T ss_pred             eeEEecCCceEEEEEeccc-eeeecCccHHHHHhcc-C-CCceeeecCCccceEEEecCCccccCcccCCCceEEEEEcc
Confidence            4478999999999988765 6689876666666665 5 46888999999999998542          1 479999999


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC
Q psy8430         234 INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  303 (361)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~  303 (361)
                      +|.....                       ...+.+......-..||.|++|++.-.. .+|.||+..+.
T Consensus       291 tG~lkrs-----------------------F~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf  336 (698)
T KOG2314|consen  291 TGLLKRS-----------------------FPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSF  336 (698)
T ss_pred             ccchhcc-----------------------eeccCCCccccceEEeccCCceeEEecc-ceEEEEecCce
Confidence            8854322                       1111222223344679999999998776 56888887653

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=97.61  E-value=0.0046  Score=56.32  Aligned_cols=134  Identities=18%  Similarity=0.050  Sum_probs=85.2

Q ss_pred             CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCC
Q psy8430         173 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKE  252 (361)
Q Consensus       173 ~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      +..++.++.++.+..+|..+|+.+..+.-.......+..  ++..++.++.|+.+..+|..+++.....           
T Consensus        65 ~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~-----------  131 (377)
T TIGR03300        65 GGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGA--DGGLVFVGTEKGEVIALDAEDGKELWRA-----------  131 (377)
T ss_pred             CCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEE--cCCEEEEEcCCCEEEEEECCCCcEeeee-----------
Confidence            568888899999999999999887766533322222222  5677888889999999998877432210           


Q ss_pred             CCCCceecccccEEEeCCCCcEE-EEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCC---------CeE--EE
Q psy8430         253 PDESSITLRTPVKELLGHSNVVI-AADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE---------PHI--LC  320 (361)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~---------v~~--~~  320 (361)
                                     .. ...+. ...+  .+..++.++.++.++.||.++|+.+-.+......         +..  .+
T Consensus       132 ---------------~~-~~~~~~~p~v--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~~~~v  193 (377)
T TIGR03300       132 ---------------KL-SSEVLSPPLV--ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIADGGV  193 (377)
T ss_pred             ---------------cc-CceeecCCEE--ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEECCEE
Confidence                           00 01111 1112  3456777888999999999999887665433211         110  34


Q ss_pred             EEcCCCcccCCCeEEEEcCCCCCC
Q psy8430         321 VSSYYSKVSCDLFQRIQHLDCGTS  344 (361)
Q Consensus       321 ~s~s~~~v~~dg~i~iW~~d~~~~  344 (361)
                      +.+.     .+|.+..+  |..++
T Consensus       194 ~~~~-----~~g~v~al--d~~tG  210 (377)
T TIGR03300       194 LVGF-----AGGKLVAL--DLQTG  210 (377)
T ss_pred             EEEC-----CCCEEEEE--EccCC
Confidence            4445     67777777  66444

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG2041|consensus

Probab=97.56  E-value=7.5e-05  Score=69.51  Aligned_cols=123  Identities=17%  Similarity=0.184  Sum_probs=91.4

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEE--eCCCCCeEEEEEecCCCEEEEEECCCcEEE
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY--SGHSGSVNSVRFLPNKDLVLSASGDKSVHI  229 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~--~~h~~~v~~v~~~~~~~~l~s~~~d~~i~l  229 (361)
                      ..-++|.||.+.|.-+.|+.+.+.|-++..+|.|.+|-+-.|.-....  ....+.|.+++|+.+|..++.+-.||.|.+
T Consensus        62 smNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIV  141 (1189)
T KOG2041|consen   62 SMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIV  141 (1189)
T ss_pred             chhhhhccCcceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEE
Confidence            344678999999999999999999999999999999998776422111  235678899999999999999989998876


Q ss_pred             EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCC
Q psy8430         230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  301 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~  301 (361)
                      =.+..+.                      ..   -+.+.  ......+.|++|.+.++.+-..|.+.++|..
T Consensus       142 GsvdGNR----------------------Iw---gKeLk--g~~l~hv~ws~D~~~~Lf~~ange~hlydnq  186 (1189)
T KOG2041|consen  142 GSVDGNR----------------------IW---GKELK--GQLLAHVLWSEDLEQALFKKANGETHLYDNQ  186 (1189)
T ss_pred             Eeeccce----------------------ec---chhcc--hheccceeecccHHHHHhhhcCCcEEEeccc
Confidence            5543220                      00   01111  1123367899999998888888999999865

>KOG4640|consensus

Probab=97.55  E-value=0.00053  Score=63.18  Aligned_cols=78  Identities=8%  Similarity=0.098  Sum_probs=69.5

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeE-EEEEecCCCEEEEEECCCcEEEEeccccccccC
Q psy8430         162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN-SVRFLPNKDLVLSASGDKSVHIWQAVINWECLN  240 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~-~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~  240 (361)
                      ..|.-+.|+|.-.+||.+..+|.|.+..+. .+.+.++.-|+..|+ +++|.|+|+.++.|-.||+|++.|+.++..+..
T Consensus        21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~   99 (665)
T KOG4640|consen   21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVS   99 (665)
T ss_pred             cceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceec
Confidence            446778899999999999999999999987 777888887888888 999999999999999999999999998866655

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=97.49  E-value=0.007  Score=53.79  Aligned_cols=114  Identities=13%  Similarity=0.189  Sum_probs=79.1

Q ss_pred             EcC-CCCEEEEEeCCCcEEEEeCCCC-----eEEEEEeC-------CCCCeEEEEEecCCCEEEEEEC----------CC
Q psy8430         169 VRP-GQPVLGSASADRTVRLWSTQTG-----KCVLQYSG-------HSGSVNSVRFLPNKDLVLSASG----------DK  225 (361)
Q Consensus       169 ~~~-~~~~l~s~s~d~~i~~wd~~~~-----~~~~~~~~-------h~~~v~~v~~~~~~~~l~s~~~----------d~  225 (361)
                      |.+ +|.+++.+.. |+|.+-|+...     .....+..       ..+.+.-++++|+++.++.+..          .+
T Consensus       201 ~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~  279 (352)
T TIGR02658       201 YSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASR  279 (352)
T ss_pred             eEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCC
Confidence            344 7777776665 99999996432     22222210       2334455999999888777431          24


Q ss_pred             cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCC-EEEEEe-CCCcEEEeeCCCC
Q psy8430         226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITAS-WDRVANLFDVETG  303 (361)
Q Consensus       226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~-~d~~v~iwd~~~~  303 (361)
                      .|.++|..+.+                          .+..+. -...+..++++||++ +|++.+ .++.|.++|..++
T Consensus       280 ~V~ViD~~t~k--------------------------vi~~i~-vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~  332 (352)
T TIGR02658       280 FLFVVDAKTGK--------------------------RLRKIE-LGHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETG  332 (352)
T ss_pred             EEEEEECCCCe--------------------------EEEEEe-CCCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCC
Confidence            78888887652                          334443 245889999999999 888776 5788999999999


Q ss_pred             eEEEEee
Q psy8430         304 TILQSLT  310 (361)
Q Consensus       304 ~~~~~~~  310 (361)
                      +.+.++.
T Consensus       333 k~i~~i~  339 (352)
T TIGR02658       333 KELSSVN  339 (352)
T ss_pred             eEEeeec
Confidence            9999884

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=97.44  E-value=0.036  Score=47.88  Aligned_cols=69  Identities=19%  Similarity=0.306  Sum_probs=47.3

Q ss_pred             EEEEEcC-CCCEEEEEeCCCc-EEEEeCCCCeEEEEEeCCCCCe--EEEEEecCCCEEEEEE-----CCCcEEEEecc
Q psy8430         165 WDVAVRP-GQPVLGSASADRT-VRLWSTQTGKCVLQYSGHSGSV--NSVRFLPNKDLVLSAS-----GDKSVHIWQAV  233 (361)
Q Consensus       165 ~~l~~~~-~~~~l~s~s~d~~-i~~wd~~~~~~~~~~~~h~~~v--~~v~~~~~~~~l~s~~-----~d~~i~lwd~~  233 (361)
                      ..++.+| .+..++.+-.-|+ ..+||..+++....+....+.-  =.-.|+++|++|++.-     ..|.|-|||..
T Consensus         8 H~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~   85 (305)
T PF07433_consen    8 HGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA   85 (305)
T ss_pred             cceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc
Confidence            3567788 4556666666554 6679999998776654322211  1357999999999863     45789999987

>KOG2114|consensus

Probab=97.40  E-value=0.023  Score=54.76  Aligned_cols=186  Identities=15%  Similarity=0.140  Sum_probs=111.9

Q ss_pred             eeeeeeeccceeEEeeecCc-----cceeeeEEeeccCCC-eEEEEEcCCCCEEEEEeCCCc-----EEEEeCCCC----
Q psy8430         129 TTNKLKVQTSKIVSSFKTSL-----LSCYKIRSFSGHRDG-VWDVAVRPGQPVLGSASADRT-----VRLWSTQTG----  193 (361)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~h~~~-V~~l~~~~~~~~l~s~s~d~~-----i~~wd~~~~----  193 (361)
                      .+..+...++.++-.-..+.     ...+.++.++.+... |..+....+.++|++-+.|+.     +++|+++.-    
T Consensus        27 ~isc~~s~~~~vvigt~~G~V~~Ln~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~  106 (933)
T KOG2114|consen   27 AISCCSSSTGSVVIGTADGRVVILNSSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNN  106 (933)
T ss_pred             ceeEEcCCCceEEEeeccccEEEecccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCC
Confidence            45555556655543222221     334566788888877 555555555578888887754     899998632    


Q ss_pred             --eEE---EEEe----CCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceeccccc
Q psy8430         194 --KCV---LQYS----GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPV  264 (361)
Q Consensus       194 --~~~---~~~~----~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (361)
                        .++   +.+.    ....++.+++.+.+-..+|.|-.||.|..+.=.-.                      .......
T Consensus       107 sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~----------------------RDrgsr~  164 (933)
T KOG2114|consen  107 SPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDIL----------------------RDRGSRQ  164 (933)
T ss_pred             CcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcch----------------------hccccce
Confidence              233   1111    13567889999999888999999999988842110                      0001112


Q ss_pred             EEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE--EEEeecCCCCCeEEEEEcC-C-CcccCCCeEEEE
Q psy8430         265 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI--LQSLTGHDEEPHILCVSSY-Y-SKVSCDLFQRIQ  337 (361)
Q Consensus       265 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~--~~~~~~h~~~v~~~~~s~s-~-~~v~~dg~i~iW  337 (361)
                      .-......+|+.+++..+++.++-+.....|.+|.+. |+.  ...+..|...+.|..++.+ + .-++.+..+.+|
T Consensus       165 ~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~-gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~~e~l~fY  240 (933)
T KOG2114|consen  165 DYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLS-GRTPSLKVLDNNGISLNCSSFSDGTYQFICAGSEFLYFY  240 (933)
T ss_pred             eeeccCCCCceeeEEecCCceeEEEEecceeEEEEec-CCCcceeeeccCCccceeeecCCCCccEEEecCceEEEE
Confidence            2222346799999999888874333444678899887 443  4456667666666222222 1 112345667777

>KOG4640|consensus

Probab=97.35  E-value=0.00098  Score=61.51  Aligned_cols=79  Identities=20%  Similarity=0.251  Sum_probs=65.7

Q ss_pred             CCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEE-EEEEcC
Q psy8430         203 SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVI-AADWLS  281 (361)
Q Consensus       203 ~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~  281 (361)
                      ...|.-+.|+|.-.++|.+..+|.+.+..+.                           ++.+..+.-|...++ +++|.|
T Consensus        20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n---------------------------~qRlwtip~p~~~v~~sL~W~~   72 (665)
T KOG4640|consen   20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN---------------------------WQRLWTIPIPGENVTASLCWRP   72 (665)
T ss_pred             ccceEEEEEcCccchhheeccCCcEEEEEec---------------------------cceeEeccCCCCccceeeeecC
Confidence            4567889999999999999999998888664                           124555555666666 999999


Q ss_pred             CCCEEEEEeCCCcEEEeeCCCCeEEEE
Q psy8430         282 DGEQVITASWDRVANLFDVETGTILQS  308 (361)
Q Consensus       282 ~~~~l~s~~~d~~v~iwd~~~~~~~~~  308 (361)
                      ||+.++.|-.||+|++.|+++|..+..
T Consensus        73 DGkllaVg~kdG~I~L~Dve~~~~l~~   99 (665)
T KOG4640|consen   73 DGKLLAVGFKDGTIRLHDVEKGGRLVS   99 (665)
T ss_pred             CCCEEEEEecCCeEEEEEccCCCceec
Confidence            999999999999999999999887766

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=97.35  E-value=0.031  Score=47.07  Aligned_cols=136  Identities=16%  Similarity=0.049  Sum_probs=82.5

Q ss_pred             CCEEEEEeCCCcEEEEeCCCCeEEEEE-eCCC---CCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCC
Q psy8430         173 QPVLGSASADRTVRLWSTQTGKCVLQY-SGHS---GSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLD  248 (361)
Q Consensus       173 ~~~l~s~s~d~~i~~wd~~~~~~~~~~-~~h~---~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~  248 (361)
                      +..++.++.|+.+..+|..+|+.+... ....   ...........+..++.+..++.+..+|+.++..+.         
T Consensus        76 ~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w---------  146 (238)
T PF13360_consen   76 GGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLW---------  146 (238)
T ss_dssp             TTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEE---------
T ss_pred             ccccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEE---------
Confidence            456777778889999999999988774 3221   111222333347888889989999999998885422         


Q ss_pred             CCCCCCCCceecccccEEEeCCC----------CcEEEEEEcCCCCEEEEEeCCCc-EEEeeCCCCeEEEEeecCCCCCe
Q psy8430         249 ESKEPDESSITLRTPVKELLGHS----------NVVIAADWLSDGEQVITASWDRV-ANLFDVETGTILQSLTGHDEEPH  317 (361)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~l~s~~~d~~-v~iwd~~~~~~~~~~~~h~~~v~  317 (361)
                                       ......          ..+.+-....++ .++.++.++. +.+ |+.+++.+-... ... ..
T Consensus       147 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~-d~~tg~~~w~~~-~~~-~~  205 (238)
T PF13360_consen  147 -----------------KYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAV-DLATGEKLWSKP-ISG-IY  205 (238)
T ss_dssp             -----------------EEESSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEE-ETTTTEEEEEEC-SS--EC
T ss_pred             -----------------EeecCCCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEE-ECCCCCEEEEec-CCC-cc
Confidence                             111111          111222222244 7777777785 555 999998653322 122 22


Q ss_pred             E-------EEEEcCCCcccCCCeEEEEcCCCCCCC
Q psy8430         318 I-------LCVSSYYSKVSCDLFQRIQHLDCGTSE  345 (361)
Q Consensus       318 ~-------~~~s~s~~~v~~dg~i~iW~~d~~~~~  345 (361)
                      .       .++..+     .++.|..|  |..|++
T Consensus       206 ~~~~~~~~~l~~~~-----~~~~l~~~--d~~tG~  233 (238)
T PF13360_consen  206 SLPSVDGGTLYVTS-----SDGRLYAL--DLKTGK  233 (238)
T ss_dssp             ECEECCCTEEEEEE-----TTTEEEEE--ETTTTE
T ss_pred             CCceeeCCEEEEEe-----CCCEEEEE--ECCCCC
Confidence            2       444444     79999999  885543

...

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=97.33  E-value=0.014  Score=52.73  Aligned_cols=144  Identities=11%  Similarity=0.040  Sum_probs=92.6

Q ss_pred             EEEEcCCCCEEEEEe-----------CCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE--CCCcEEEEec
Q psy8430         166 DVAVRPGQPVLGSAS-----------ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS--GDKSVHIWQA  232 (361)
Q Consensus       166 ~l~~~~~~~~l~s~s-----------~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~--~d~~i~lwd~  232 (361)
                      .+.|++.|++|+.--           ....+.++++. ++.+.......++|...+|.|.++.|++.+  .+-.+.++|+
T Consensus       227 qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~-e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~l  305 (561)
T COG5354         227 QLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRIT-ERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDL  305 (561)
T ss_pred             EEEEecCCceEEEEEEEeeecccceeccceEEEEeec-ccccceeccccccceeeeecccCCceeEEecccccceeeccc
Confidence            567888888655321           12356777775 333333335689999999999988877655  6788999998


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC---CcEEEeeCCCCeEE-EE
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD---RVANLFDVETGTIL-QS  308 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~v~iwd~~~~~~~-~~  308 (361)
                      +.+                             ..+......-..+.|+|.+++++.++-|   |.+-+||....-.+ ..
T Consensus       306 r~N-----------------------------l~~~~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~  356 (561)
T COG5354         306 RGN-----------------------------LRFYFPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGA  356 (561)
T ss_pred             ccc-----------------------------eEEecCCcccccccccCcccEEEEecCCccccceEEeccCCceEEEEE
Confidence            754                             2223344455567799999999998776   66899998754433 36


Q ss_pred             eecCCCCCeE------EEEEcC-CCcccCCCeEEEEcCCC
Q psy8430         309 LTGHDEEPHI------LCVSSY-YSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       309 ~~~h~~~v~~------~~~s~s-~~~v~~dg~i~iW~~d~  341 (361)
                      +.+.......      ++.+.. ...+-.|..|+||  |+
T Consensus       357 ~~~~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~--~v  394 (561)
T COG5354         357 FNGLNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLW--DV  394 (561)
T ss_pred             eecCCceEeeccCCceEEEecCCCcccccCcceEEE--Ee
Confidence            6554333321      221111 1123469999999  77

>KOG3617|consensus

Probab=97.33  E-value=0.00035  Score=66.46  Aligned_cols=107  Identities=15%  Similarity=0.209  Sum_probs=80.2

Q ss_pred             EEEcCCCCEEEEEeC----CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCC
Q psy8430         167 VAVRPGQPVLGSASA----DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNND  242 (361)
Q Consensus       167 l~~~~~~~~l~s~s~----d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~  242 (361)
                      ..|+|..++|+.++.    .|+|-||- ++|++..... ..-.+.+++|+|..-.|+.|-.-|.+.+|...+..      
T Consensus        21 ~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt-~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e------   92 (1416)
T KOG3617|consen   21 SSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVT-YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTE------   92 (1416)
T ss_pred             cccCCCCceeEEEEecCCCCceEEEEe-cCCCCCcccc-cceehhhhccChHHHHHhhccccceeEEEecCCce------
Confidence            458888888888764    36777764 3555432221 22345679999988888999889999999865441      


Q ss_pred             CCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCC
Q psy8430         243 NDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  301 (361)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~  301 (361)
                                          .......|..++..+.|||+|..++++..-|.|.+|...
T Consensus        93 --------------------~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   93 --------------------THTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             --------------------eeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence                                223334689999999999999999999999999999765

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=97.32  E-value=0.011  Score=49.96  Aligned_cols=114  Identities=17%  Similarity=0.159  Sum_probs=76.4

Q ss_pred             CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCC
Q psy8430         172 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESK  251 (361)
Q Consensus       172 ~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~  251 (361)
                      ++..+++++.++.+..||..+|+.+..+.. ...+.... ...+..++.++.|+.+..+|..++...             
T Consensus        35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~-~~~~~~v~v~~~~~~l~~~d~~tG~~~-------------   99 (238)
T PF13360_consen   35 DGGRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAP-VVDGGRVYVGTSDGSLYALDAKTGKVL-------------   99 (238)
T ss_dssp             ETTEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGE-EEETTEEEEEETTSEEEEEETTTSCEE-------------
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEeec-ccccccee-eecccccccccceeeeEecccCCccee-------------
Confidence            455777888999999999999998877764 33222211 224566777778889999998877432             


Q ss_pred             CCCCCceecccccEE-EeCC---CCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCC
Q psy8430         252 EPDESSITLRTPVKE-LLGH---SNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD  313 (361)
Q Consensus       252 ~~~~~~~~~~~~~~~-~~~~---~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~  313 (361)
                                   .. ....   ............+..++.+..++.|..+|.++|+.+..+....
T Consensus       100 -------------W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~  152 (238)
T PF13360_consen  100 -------------WSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGE  152 (238)
T ss_dssp             -------------EEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESST
T ss_pred             -------------eeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCC
Confidence                         11 1111   0111112222248889999989999999999999988887644

...

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=97.24  E-value=0.05  Score=45.83  Aligned_cols=69  Identities=10%  Similarity=0.201  Sum_probs=48.3

Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEeCCCC--eEEEEEe---CCCCCeEEEEEecCCCEEEEEECCCcEEEEecccc
Q psy8430         166 DVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYS---GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN  235 (361)
Q Consensus       166 ~l~~~~~~~~l~s~s~d~~i~~wd~~~~--~~~~~~~---~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~  235 (361)
                      .++.+.+|++||. -.|..|-|-..+..  ..+....   .....-..++|+||+.+||.+...|+|++||+...
T Consensus         2 ~~~~~~~Gk~lAi-~qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~   75 (282)
T PF15492_consen    2 HLALSSDGKLLAI-LQDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGS   75 (282)
T ss_pred             ceeecCCCcEEEE-EeccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccc
Confidence            4567788876665 46667777655433  2223322   23345678999999999999999999999998754

>KOG1920|consensus

Probab=97.22  E-value=0.005  Score=61.21  Aligned_cols=116  Identities=12%  Similarity=0.138  Sum_probs=76.5

Q ss_pred             EEEEEcCCCCEEEEEe----CC-CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE---CCCcEEEEeccccc
Q psy8430         165 WDVAVRPGQPVLGSAS----AD-RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS---GDKSVHIWQAVINW  236 (361)
Q Consensus       165 ~~l~~~~~~~~l~s~s----~d-~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~---~d~~i~lwd~~~~~  236 (361)
                      ++++|-.||.++|+..    .+ +.|++||-+ |..-.+-....+.=.+++|-|.|.++++-.   .|+.|.+|.-+.-.
T Consensus       199 ~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~  277 (1265)
T KOG1920|consen  199 TSISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLR  277 (1265)
T ss_pred             ceEEEccCCcEEEEEEEeccCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCcc
Confidence            4689999999998842    23 799999986 543333333344556899999999988754   45678888643210


Q ss_pred             cccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEE---EeCCCcEEEeeCCCCe
Q psy8430         237 ECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT---ASWDRVANLFDVETGT  304 (361)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s---~~~d~~v~iwd~~~~~  304 (361)
                                             -......+......|..++|+.++..|++   ......|++|-+.+..
T Consensus       278 -----------------------hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Nyh  325 (1265)
T KOG1920|consen  278 -----------------------HGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYH  325 (1265)
T ss_pred             -----------------------ccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecCeE
Confidence                                   00011112223334899999999999887   4444559999887654

>KOG1008|consensus

Probab=97.15  E-value=6.7e-05  Score=68.99  Aligned_cols=116  Identities=18%  Similarity=0.169  Sum_probs=82.2

Q ss_pred             EeeccCCCeEEEEEcC-CCCEEEEEe----CCCcEEEEeCCCC--eEE--EEEeC-CCCCeEEEEEecCCCEEEEEECCC
Q psy8430         156 SFSGHRDGVWDVAVRP-GQPVLGSAS----ADRTVRLWSTQTG--KCV--LQYSG-HSGSVNSVRFLPNKDLVLSASGDK  225 (361)
Q Consensus       156 ~l~~h~~~V~~l~~~~-~~~~l~s~s----~d~~i~~wd~~~~--~~~--~~~~~-h~~~v~~v~~~~~~~~l~s~~~d~  225 (361)
                      ...+|....++++|++ |.+.||+|-    .|..+.|||+.++  .+.  ..|.+ ....+.+++|-.+.+++.+|...+
T Consensus        97 ~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr  176 (783)
T KOG1008|consen   97 VTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSR  176 (783)
T ss_pred             ecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccccccccCccccccccCcchhhcccccc
Confidence            3457889999999999 666777773    3567999999876  221  22332 445667889988888899999999


Q ss_pred             cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEee
Q psy8430         226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFD  299 (361)
Q Consensus       226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd  299 (361)
                      .++++|++..                           ......-.+..+..+.++| .+.|+++-. ||.|.+||
T Consensus       177 ~~~ifdlRqs---------------------------~~~~~svnTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD  223 (783)
T KOG1008|consen  177 SVHIFDLRQS---------------------------LDSVSSVNTKYVQGITVDPFSPNYFCSNS-DGDIAIWD  223 (783)
T ss_pred             hhhhhhhhhh---------------------------hhhhhhhhhhhcccceecCCCCCceeccc-cCceeecc
Confidence            9999998743                           1111122334566677888 677776654 99999999

>KOG0882|consensus

Probab=97.10  E-value=0.01  Score=52.79  Aligned_cols=169  Identities=15%  Similarity=0.104  Sum_probs=110.6

Q ss_pred             EEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC------CeE---------EEEEeCCCCC
Q psy8430         141 VSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT------GKC---------VLQYSGHSGS  205 (361)
Q Consensus       141 ~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~------~~~---------~~~~~~h~~~  205 (361)
                      +.++......++....-.-|..+|.++.+++-+..+++....|.|.-|....      ++.         +..+......
T Consensus       124 i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~  203 (558)
T KOG0882|consen  124 IFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTE  203 (558)
T ss_pred             cEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccC
Confidence            3344444455566666667999999999999999999999999999999862      111         1112234567


Q ss_pred             eEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCC--CCCCCC-Cceeccc---ccEEEeCCCC-cEEEEE
Q psy8430         206 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDE--SKEPDE-SSITLRT---PVKELLGHSN-VVIAAD  278 (361)
Q Consensus       206 v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~---~~~~~~~~~~-~v~~~~  278 (361)
                      ..++.|+|++..+.+-+.|..|++++.+++..+....-......  ...+-. ......+   ..+.+..|.. .-+.+.
T Consensus       204 pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~  283 (558)
T KOG0882|consen  204 PTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAV  283 (558)
T ss_pred             ccceEEccccCcccccCcccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeE
Confidence            88999999999999999999999999998866543221111000  000000 0000000   1112222332 344567


Q ss_pred             EcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430         279 WLSDGEQVITASWDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       279 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~  310 (361)
                      |...|++|+-|+-=| |++.++.++.+++.+.
T Consensus       284 fdes~~flly~t~~g-ikvin~~tn~v~ri~g  314 (558)
T KOG0882|consen  284 FDESGNFLLYGTILG-IKVINLDTNTVVRILG  314 (558)
T ss_pred             EcCCCCEEEeeccee-EEEEEeecCeEEEEec
Confidence            999999999988755 8899999998887764

>KOG3617|consensus

Probab=97.06  E-value=0.0074  Score=57.89  Aligned_cols=100  Identities=13%  Similarity=0.152  Sum_probs=73.6

Q ss_pred             eeeeeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEE
Q psy8430         130 TNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV  209 (361)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v  209 (361)
                      +..+....+..+.+|.....   +-+... ..-.+++++|+|..-.|+.|=.-|.+.+|...+.+.-.....|..+|..+
T Consensus        32 VA~fS~er~GSVtIfadtGE---Pqr~Vt-~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l  107 (1416)
T KOG3617|consen   32 VASFSPERGGSVTIFADTGE---PQRDVT-YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGL  107 (1416)
T ss_pred             EEEecCCCCceEEEEecCCC---CCcccc-cceehhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeE
Confidence            34445555556666655332   222111 11225679999998899999889999999987766544555799999999


Q ss_pred             EEecCCCEEEEEECCCcEEEEecc
Q psy8430         210 RFLPNKDLVLSASGDKSVHIWQAV  233 (361)
Q Consensus       210 ~~~~~~~~l~s~~~d~~i~lwd~~  233 (361)
                      .|+|+|..++|+..=|.+.+|...
T Consensus       108 ~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen  108 DWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             EecCCCCeEEEcCCCceeEEEEee
Confidence            999999999999999999999765

>KOG2114|consensus

Probab=97.02  E-value=0.041  Score=53.07  Aligned_cols=149  Identities=11%  Similarity=0.051  Sum_probs=90.8

Q ss_pred             EEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCC-eEEEEEecCCCEEEEEECCC-----cEEEEeccccccccCC
Q psy8430         168 AVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS-VNSVRFLPNKDLVLSASGDK-----SVHIWQAVINWECLNN  241 (361)
Q Consensus       168 ~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~-v~~v~~~~~~~~l~s~~~d~-----~i~lwd~~~~~~~~~~  241 (361)
                      +|++.+..++.|+.||.|.+.+- .-+.+..|+.+... |..+....+...|++.+.|+     .+++|++..-.+..  
T Consensus        30 c~~s~~~~vvigt~~G~V~~Ln~-s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~--  106 (933)
T KOG2114|consen   30 CCSSSTGSVVIGTADGRVVILNS-SFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNN--  106 (933)
T ss_pred             EEcCCCceEEEeeccccEEEecc-cceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCC--
Confidence            36777889999999999988763 23445778887777 44443333335777777654     48999986442110  


Q ss_pred             CCCCCCCCCCCCCCCceeccccc--EEEeC-----CCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCC---CCeEEEEee-
Q psy8430         242 DNDSDLDESKEPDESSITLRTPV--KELLG-----HSNVVIAADWLSDGEQVITASWDRVANLFDVE---TGTILQSLT-  310 (361)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~---~~~~~~~~~-  310 (361)
                                        ...++  ..+.+     ...++.+++++.+-+.+|+|-.+|.|..+.-.   .......+. 
T Consensus       107 ------------------sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~  168 (933)
T KOG2114|consen  107 ------------------SPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSH  168 (933)
T ss_pred             ------------------CcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeec
Confidence                              01122  12222     35678899999999999999999999888421   111112222 


Q ss_pred             cCCCCCeEEEEEcCC---CcccCCCeEEEE
Q psy8430         311 GHDEEPHILCVSSYY---SKVSCDLFQRIQ  337 (361)
Q Consensus       311 ~h~~~v~~~~~s~s~---~~v~~dg~i~iW  337 (361)
                      ...++|+.+.+-...   .+|+.-..|.+|
T Consensus       169 ~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y  198 (933)
T KOG2114|consen  169 RGKEPITGLALRSDGKSVLFVATTEQVMLY  198 (933)
T ss_pred             cCCCCceeeEEecCCceeEEEEecceeEEE
Confidence            234567763332221   123344567777

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=97.02  E-value=0.05  Score=55.17  Aligned_cols=150  Identities=14%  Similarity=0.152  Sum_probs=86.5

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe--EEEEEe-CCCCCeEEEEEecC-CCEEEEEECCCc
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYS-GHSGSVNSVRFLPN-KDLVLSASGDKS  226 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~--~~~~~~-~h~~~v~~v~~~~~-~~~l~s~~~d~~  226 (361)
                      ++..-.+......|..+.|++|+..||..-.|. |.+|-..+..  ..+.+. .....+..+.|+|. ...|...+.+|.
T Consensus       294 geF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~  372 (928)
T PF04762_consen  294 GEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQ  372 (928)
T ss_pred             eeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCc
Confidence            333333334567899999999999999987665 9999987652  122222 23344566999994 455777777677


Q ss_pred             EEEEeccccccccCCCC-----CCCCCCCCCCCCC---ceeccccc--EEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy8430         227 VHIWQAVINWECLNNDN-----DSDLDESKEPDES---SITLRTPV--KELLGHSNVVIAADWLSDGEQVITASWDRVAN  296 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~-----~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~  296 (361)
                      +..++..-.........     .....++......   ......|.  ..+ .-..+|..++|++++..+++-..||.+.
T Consensus       373 ~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l-~~~~~v~~vaf~~~~~~~avl~~d~~l~  451 (928)
T PF04762_consen  373 YEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYEL-ELPSPVNDVAFSPSNSRFAVLTSDGSLS  451 (928)
T ss_pred             EEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEE-cCCCCcEEEEEeCCCCeEEEEECCCCEE
Confidence            66554322111110000     0000000000000   00011122  222 2356899999999998899999999999


Q ss_pred             EeeCCC
Q psy8430         297 LFDVET  302 (361)
Q Consensus       297 iwd~~~  302 (361)
                      +|....
T Consensus       452 ~~~~~~  457 (928)
T PF04762_consen  452 IYEWDL  457 (928)
T ss_pred             EEEecC
Confidence            998543

>PRK02888 nitrous-oxide reductase; Validated

Probab=96.95  E-value=0.04  Score=52.18  Aligned_cols=167  Identities=10%  Similarity=0.020  Sum_probs=84.3

Q ss_pred             EcCCCCEEEE-EeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCC---------------cEEEEec
Q psy8430         169 VRPGQPVLGS-ASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK---------------SVHIWQA  232 (361)
Q Consensus       169 ~~~~~~~l~s-~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~---------------~i~lwd~  232 (361)
                      ++|||..+.. .-..+.+.+.|..+.+...++.- .+....+.++|+|.++++.+.+.               .+.++++
T Consensus       200 lpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~V-dgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni  278 (635)
T PRK02888        200 LPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMV-DGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNI  278 (635)
T ss_pred             cCCCCCEeecccceeEEEEEEECccceEEEEEEe-CCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEch
Confidence            5566654432 33345677778777666666552 33556678888888877765321               2233333


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceeccc------ccEEEeCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEeeCCCCeE
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRT------PVKELLGHSNVVIAADWLSDGEQVITASW-DRVANLFDVETGTI  305 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd~~~~~~  305 (361)
                      ...............   ...........+      .+.....-......+.++|||+++++++. +.+|.|.|+.+.+.
T Consensus       279 ~~iea~vkdGK~~~V---~gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~  355 (635)
T PRK02888        279 ARIEEAVKAGKFKTI---GGSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDD  355 (635)
T ss_pred             HHHHHhhhCCCEEEE---CCCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhh
Confidence            211110000000000   000000011111      12222223445677899999999887665 88999999987552


Q ss_pred             ------------EEEeecCCCCCeEEEEEcC---CCcccCCCeEEEEcCC
Q psy8430         306 ------------LQSLTGHDEEPHILCVSSY---YSKVSCDLFQRIQHLD  340 (361)
Q Consensus       306 ------------~~~~~~h~~~v~~~~~s~s---~~~v~~dg~i~iW~~d  340 (361)
                                  +.....-.++... .+.+.   |.++--|..|-.||++
T Consensus       356 ~~~~~~~~~~~vvaevevGlGPLHT-aFDg~G~aytslf~dsqv~kwn~~  404 (635)
T PRK02888        356 LFDGKIKPRDAVVAEPELGLGPLHT-AFDGRGNAYTTLFLDSQIVKWNIE  404 (635)
T ss_pred             hhhccCCccceEEEeeccCCCcceE-EECCCCCEEEeEeecceeEEEehH
Confidence                        3333333333332 23333   1123378899999433

>KOG4649|consensus

Probab=96.88  E-value=0.13  Score=42.92  Aligned_cols=111  Identities=14%  Similarity=0.044  Sum_probs=78.3

Q ss_pred             CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCC
Q psy8430         173 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKE  252 (361)
Q Consensus       173 ~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      ..+++.||..+.+..-|..+|+.+..-. -...+.+-+.- -|+.++.|+..|.+.+-+.+++.+...            
T Consensus        23 kT~v~igSHs~~~~avd~~sG~~~We~i-lg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~------------   88 (354)
T KOG4649|consen   23 KTLVVIGSHSGIVIAVDPQSGNLIWEAI-LGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWN------------   88 (354)
T ss_pred             ceEEEEecCCceEEEecCCCCcEEeehh-hCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheee------------
Confidence            4578888888888888998887654432 33444443333 477899999999999999988744321            


Q ss_pred             CCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430         253 PDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG  311 (361)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~  311 (361)
                                    +..-..--......+++..+++|+.|+..+..|.++..++-..+.
T Consensus        89 --------------f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskc  133 (354)
T KOG4649|consen   89 --------------FVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKC  133 (354)
T ss_pred             --------------eeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEeccc
Confidence                          111111112234677999999999999999999999888877653

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=96.86  E-value=0.092  Score=48.17  Aligned_cols=129  Identities=12%  Similarity=0.023  Sum_probs=80.2

Q ss_pred             CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCC
Q psy8430         173 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKE  252 (361)
Q Consensus       173 ~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      +..++.++.++.+..+|..+|+.+....  ......+.  ..+..++.++.+|.+..+|..++......           
T Consensus       256 ~~~vy~~~~~g~l~ald~~tG~~~W~~~--~~~~~~~~--~~~~~vy~~~~~g~l~ald~~tG~~~W~~-----------  320 (394)
T PRK11138        256 GGVVYALAYNGNLVALDLRSGQIVWKRE--YGSVNDFA--VDGGRIYLVDQNDRVYALDTRGGVELWSQ-----------  320 (394)
T ss_pred             CCEEEEEEcCCeEEEEECCCCCEEEeec--CCCccCcE--EECCEEEEEcCCCeEEEEECCCCcEEEcc-----------
Confidence            4467777889999999999998664433  11222222  24667777888999999998876432110           


Q ss_pred             CCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE-------EEEEcCC
Q psy8430         253 PDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI-------LCVSSYY  325 (361)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~-------~~~s~s~  325 (361)
                                ..  . .+ ....+..+  .+.+++.++.||.+++.|..+|+.+.........+..       .++.++ 
T Consensus       321 ----------~~--~-~~-~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~~~~~l~v~t-  383 (394)
T PRK11138        321 ----------SD--L-LH-RLLTAPVL--YNGYLVVGDSEGYLHWINREDGRFVAQQKVDSSGFLSEPVVADDKLLIQA-  383 (394)
T ss_pred             ----------cc--c-CC-CcccCCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCcceeCCEEECCEEEEEe-
Confidence                      00  0 00 01111112  2567888999999999999999998877643332322       333334 


Q ss_pred             CcccCCCeEEEE
Q psy8430         326 SKVSCDLFQRIQ  337 (361)
Q Consensus       326 ~~v~~dg~i~iW  337 (361)
                          .||.|..+
T Consensus       384 ----~~G~l~~~  391 (394)
T PRK11138        384 ----RDGTVYAI  391 (394)
T ss_pred             ----CCceEEEE
Confidence                77777666

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.82  E-value=0.0052  Score=36.96  Aligned_cols=34  Identities=12%  Similarity=0.083  Sum_probs=29.9

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE
Q psy8430         161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC  195 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~  195 (361)
                      ...|.+++|+|...+||.|+.||.|.++.+ +++.
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr   44 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR   44 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence            356999999999999999999999999998 4543

>PRK02888 nitrous-oxide reductase; Validated

Probab=96.80  E-value=0.16  Score=48.24  Aligned_cols=104  Identities=13%  Similarity=0.074  Sum_probs=68.7

Q ss_pred             CCcEEEEeCCC----C-eEEEEEeCCCCCeEEEEEecCCCEEEEEE-CCCcEEEEeccccccccCCCCCCCCCCCCCCCC
Q psy8430         182 DRTVRLWSTQT----G-KCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKSVHIWQAVINWECLNNDNDSDLDESKEPDE  255 (361)
Q Consensus       182 d~~i~~wd~~~----~-~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~  255 (361)
                      ++.|.+.|..+    + +.+..+. -......+.++|||+++++++ .+.++.|.|+.+........             
T Consensus       295 gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~-------------  360 (635)
T PRK02888        295 GSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGK-------------  360 (635)
T ss_pred             CCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhcc-------------
Confidence            35678888776    3 3444444 667888999999999877665 58899999997754322110             


Q ss_pred             Cceecccc-cEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC
Q psy8430         256 SSITLRTP-VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET  302 (361)
Q Consensus       256 ~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~  302 (361)
                        ...+.. ...... .......+|.++|....+---|..|..||+.+
T Consensus       361 --~~~~~~vvaevev-GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~  405 (635)
T PRK02888        361 --IKPRDAVVAEPEL-GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA  405 (635)
T ss_pred             --CCccceEEEeecc-CCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence              011111 222222 22334567899998888888899999999876

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=96.78  E-value=0.025  Score=55.37  Aligned_cols=129  Identities=13%  Similarity=0.172  Sum_probs=85.5

Q ss_pred             eecCccceeeeEEeeccCCC-eEEEEEcC-----CCCEEEEEeCCCcEEEEeCCCC-eEEEEEe----CCCCCeEEEEEe
Q psy8430         144 FKTSLLSCYKIRSFSGHRDG-VWDVAVRP-----GQPVLGSASADRTVRLWSTQTG-KCVLQYS----GHSGSVNSVRFL  212 (361)
Q Consensus       144 ~~~~~~~~~~~~~l~~h~~~-V~~l~~~~-----~~~~l~s~s~d~~i~~wd~~~~-~~~~~~~----~h~~~v~~v~~~  212 (361)
                      +..+..+++.+..+.-|... |.+++=+.     +..-.+.|-.++.+..||.+-. ..+..-.    .......|++-.
T Consensus       507 y~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aTt  586 (794)
T PF08553_consen  507 YKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFATT  586 (794)
T ss_pred             EEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCCceEEEec
Confidence            44555778888888887644 65554221     2335566778889999998753 2222111    123445565554


Q ss_pred             cCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy8430         213 PNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD  292 (361)
Q Consensus       213 ~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d  292 (361)
                      . .-.+|.|+.+|.||+||- .+                         .+....+.+-..+|..+..+.||+|+++.+. 
T Consensus       587 ~-~G~iavgs~~G~IRLyd~-~g-------------------------~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~-  638 (794)
T PF08553_consen  587 E-DGYIAVGSNKGDIRLYDR-LG-------------------------KRAKTALPGLGDPIIGIDVTADGKWILATCK-  638 (794)
T ss_pred             C-CceEEEEeCCCcEEeecc-cc-------------------------hhhhhcCCCCCCCeeEEEecCCCcEEEEeec-
Confidence            4 447889999999999983 11                         1133445577889999999999999988875 


Q ss_pred             CcEEEeeC
Q psy8430         293 RVANLFDV  300 (361)
Q Consensus       293 ~~v~iwd~  300 (361)
                      ..+.+++.
T Consensus       639 tyLlLi~t  646 (794)
T PF08553_consen  639 TYLLLIDT  646 (794)
T ss_pred             ceEEEEEE
Confidence            56667774

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=96.74  E-value=0.1  Score=45.69  Aligned_cols=143  Identities=15%  Similarity=0.142  Sum_probs=93.1

Q ss_pred             CCeEEEEEcCCCCEEEEEeC---------CCcEEEEeCC-CCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC-CCcEEEE
Q psy8430         162 DGVWDVAVRPGQPVLGSASA---------DRTVRLWSTQ-TGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DKSVHIW  230 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~---------d~~i~~wd~~-~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~~i~lw  230 (361)
                      ...+.+...|+|.+-++...         -..-.+|-+. .+..+..+..+-..-+.|+|+|+++.+..+.. .+.|.-|
T Consensus       111 ~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~  190 (307)
T COG3386         111 NRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRY  190 (307)
T ss_pred             CCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEE
Confidence            44667888999886666544         1122455555 56666666666777789999999987776654 4677777


Q ss_pred             eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC-cEEEeeCCCCeEEEEe
Q psy8430         231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR-VANLFDVETGTILQSL  309 (361)
Q Consensus       231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-~v~iwd~~~~~~~~~~  309 (361)
                      ++.... .                  ...............+..-.++...+|.+.+++..+| .|.+|+.. |+.+..+
T Consensus       191 ~~d~~~-g------------------~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i  250 (307)
T COG3386         191 DLDPAT-G------------------PIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEI  250 (307)
T ss_pred             ecCccc-C------------------ccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEE
Confidence            664200 0                  0001111222333456677788888998886665554 89999998 9999999


Q ss_pred             ecCCCCCeEEEEEcC
Q psy8430         310 TGHDEEPHILCVSSY  324 (361)
Q Consensus       310 ~~h~~~v~~~~~s~s  324 (361)
                      .-+...++++++-+-
T Consensus       251 ~lP~~~~t~~~FgG~  265 (307)
T COG3386         251 KLPVKRPTNPAFGGP  265 (307)
T ss_pred             ECCCCCCccceEeCC
Confidence            887666777566553

>KOG1008|consensus

Probab=96.73  E-value=0.00033  Score=64.59  Aligned_cols=155  Identities=17%  Similarity=0.136  Sum_probs=94.7

Q ss_pred             CCCeEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCe-E-EEEEeCCCCCeEEEEEec-CCCEEEEEE----CCCcEEEEe
Q psy8430         161 RDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTGK-C-VLQYSGHSGSVNSVRFLP-NKDLVLSAS----GDKSVHIWQ  231 (361)
Q Consensus       161 ~~~V~~l~~~~--~~~~l~s~s~d~~i~~wd~~~~~-~-~~~~~~h~~~v~~v~~~~-~~~~l~s~~----~d~~i~lwd  231 (361)
                      ...+.|+++.-  +..+++.|..+|.|-+-.++... . -....++....++++|++ |.+.||.|-    .|..+.|||
T Consensus        56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwd  135 (783)
T KOG1008|consen   56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWD  135 (783)
T ss_pred             CCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCcccee
Confidence            35577777554  34589999999999998775431 1 233457888999999998 445565552    245799999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEe-CCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~  310 (361)
                      +.+.-.++.                      ....+. +......+++|..+.+.+++|...+.+.++|++.. +.....
T Consensus       136 i~s~ltvPk----------------------e~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs-~~~~~s  192 (783)
T KOG1008|consen  136 INSLLTVPK----------------------ESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQS-LDSVSS  192 (783)
T ss_pred             cccccCCCc----------------------cccccccccccCccccccccCcchhhcccccchhhhhhhhhh-hhhhhh
Confidence            976632211                      000111 12234448889989999999999999999999832 111111


Q ss_pred             cCCCCCeEEEEEc---CCCcccCCCeEEEEcCC
Q psy8430         311 GHDEEPHILCVSS---YYSKVSCDLFQRIQHLD  340 (361)
Q Consensus       311 ~h~~~v~~~~~s~---s~~~v~~dg~i~iW~~d  340 (361)
                      ..+..+..+.+.+   +|..-..||.|-+|  |
T Consensus       193 vnTk~vqG~tVdp~~~nY~cs~~dg~iAiw--D  223 (783)
T KOG1008|consen  193 VNTKYVQGITVDPFSPNYFCSNSDGDIAIW--D  223 (783)
T ss_pred             hhhhhcccceecCCCCCceeccccCceeec--c
Confidence            1121222222222   11111269999999  7

>KOG1832|consensus

Probab=96.69  E-value=0.0023  Score=61.50  Aligned_cols=91  Identities=15%  Similarity=0.176  Sum_probs=74.1

Q ss_pred             EEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcE
Q psy8430         195 CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVV  274 (361)
Q Consensus       195 ~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  274 (361)
                      ...+|..|....+|++|+-+.+.|+.|+..|.|+++++.+|.                          ......+|.++|
T Consensus      1093 ~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~--------------------------~e~s~ncH~Sav 1146 (1516)
T KOG1832|consen 1093 SWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGS--------------------------MEESVNCHQSAV 1146 (1516)
T ss_pred             cchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCcc--------------------------cccccccccccc
Confidence            345677889999999999999999999999999999998773                          455677899999


Q ss_pred             EEEEEcCCCCEEEEEeCCCc--EEEeeCC-CCeEEEEeec
Q psy8430         275 IAADWLSDGEQVITASWDRV--ANLFDVE-TGTILQSLTG  311 (361)
Q Consensus       275 ~~~~~~~~~~~l~s~~~d~~--v~iwd~~-~~~~~~~~~~  311 (361)
                      +-+.-+.+|..+++.+.-..  ..+|++. ++...+++.+
T Consensus      1147 T~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~~~~Hsf~e 1186 (1516)
T KOG1832|consen 1147 TLVEPSVDGSTQLTSSSSSSPLSALWDASSTGGPRHSFDE 1186 (1516)
T ss_pred             ccccccCCcceeeeeccccCchHHHhccccccCccccccc
Confidence            99999999998887665444  6799986 4566666654

>KOG2314|consensus

Probab=96.69  E-value=0.019  Score=52.52  Aligned_cols=113  Identities=17%  Similarity=0.213  Sum_probs=74.9

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCC---CcEEEEeCCC-C---eEEEEEeCCCCCeEEEEEecCCCEEEEEE---CCCcEEEE
Q psy8430         161 RDGVWDVAVRPGQPVLGSASAD---RTVRLWSTQT-G---KCVLQYSGHSGSVNSVRFLPNKDLVLSAS---GDKSVHIW  230 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~d---~~i~~wd~~~-~---~~~~~~~~h~~~v~~v~~~~~~~~l~s~~---~d~~i~lw  230 (361)
                      +..|...+|.|.|+.++.-+..   .++.+|.+++ +   +.+..+.  ....+.+.|+|.|+.++.+.   ..|.+.++
T Consensus       445 ke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~d--k~~~N~vfwsPkG~fvvva~l~s~~g~l~F~  522 (698)
T KOG2314|consen  445 KESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELD--KKFANTVFWSPKGRFVVVAALVSRRGDLEFY  522 (698)
T ss_pred             chheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhc--ccccceEEEcCCCcEEEEEEecccccceEEE
Confidence            5678889999999977765543   5788888773 2   2233333  35678899999999987654   56889999


Q ss_pred             eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC------CcEEEeeCC
Q psy8430         231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD------RVANLFDVE  301 (361)
Q Consensus       231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d------~~v~iwd~~  301 (361)
                      |.....                          ....-.......+.+.|.|.|+|+++++.-      .-.+||++.
T Consensus       523 D~~~a~--------------------------~k~~~~~eh~~at~veWDPtGRYvvT~ss~wrhk~d~GYri~tfq  573 (698)
T KOG2314|consen  523 DTDYAD--------------------------LKDTASPEHFAATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFTFQ  573 (698)
T ss_pred             ecchhh--------------------------hhhccCccccccccceECCCCCEEEEeeehhhhccccceEEEEee
Confidence            875311                          111111112345668899999999998864      334555554

>KOG1920|consensus

Probab=96.69  E-value=0.12  Score=51.91  Aligned_cols=69  Identities=12%  Similarity=0.157  Sum_probs=56.3

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEE
Q psy8430         161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  230 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lw  230 (361)
                      .+.|.++.|-.+++-++.+..+|.|.+-|..+.... ..-.-...|.+.+|+|+...++-.+..+++.+-
T Consensus        68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~e-ivg~vd~GI~aaswS~Dee~l~liT~~~tll~m  136 (1265)
T KOG1920|consen   68 DDEIVSVQFLADTNSICVITALGDIILVDPETLELE-IVGNVDNGISAASWSPDEELLALITGRQTLLFM  136 (1265)
T ss_pred             CcceEEEEEecccceEEEEecCCcEEEEccccccee-eeeeccCceEEEeecCCCcEEEEEeCCcEEEEE
Confidence            368999999999999999999999999988766432 222356789999999999999999988887664

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=96.58  E-value=0.15  Score=47.11  Aligned_cols=145  Identities=12%  Similarity=0.037  Sum_probs=79.3

Q ss_pred             EeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe-ccc
Q psy8430         156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ-AVI  234 (361)
Q Consensus       156 ~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd-~~~  234 (361)
                      .+....-....+.++|+|++++. +.||...++.....+....     +.-...+|.+ ...+|+-...++|.++. ...
T Consensus        27 ~lg~~~~~p~~ls~npngr~v~V-~g~geY~iyt~~~~r~k~~-----G~g~~~vw~~-~n~yAv~~~~~~I~I~kn~~~   99 (443)
T PF04053_consen   27 ELGSCEIYPQSLSHNPNGRFVLV-CGDGEYEIYTALAWRNKAF-----GSGLSFVWSS-RNRYAVLESSSTIKIYKNFKN   99 (443)
T ss_dssp             EEEE-SS--SEEEE-TTSSEEEE-EETTEEEEEETTTTEEEEE-----EE-SEEEE-T-SSEEEEE-TTS-EEEEETTEE
T ss_pred             cCCCCCcCCeeEEECCCCCEEEE-EcCCEEEEEEccCCccccc-----CceeEEEEec-CccEEEEECCCeEEEEEcCcc
Confidence            33344555788999999998888 4567777887554444332     3345678988 45577777788999963 321


Q ss_pred             cccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCC
Q psy8430         235 NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE  314 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~  314 (361)
                      .                           ....+... ..+..+-.   |..|...+.+ .|.+||+.+++.++++...  
T Consensus       100 ~---------------------------~~k~i~~~-~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--  145 (443)
T PF04053_consen  100 E---------------------------VVKSIKLP-FSVEKIFG---GNLLGVKSSD-FICFYDWETGKLIRRIDVS--  145 (443)
T ss_dssp             ----------------------------TT-----S-S-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEESS---
T ss_pred             c---------------------------cceEEcCC-cccceEEc---CcEEEEECCC-CEEEEEhhHcceeeEEecC--
Confidence            1                           11122211 12333322   7777777654 8999999999999999754  


Q ss_pred             CCeEEEEEcCCC--cccCCCeEEEEcCCC
Q psy8430         315 EPHILCVSSYYS--KVSCDLFQRIQHLDC  341 (361)
Q Consensus       315 ~v~~~~~s~s~~--~v~~dg~i~iW~~d~  341 (361)
                      .|..++|+.++.  .+..+..+.|++.+.
T Consensus       146 ~vk~V~Ws~~g~~val~t~~~i~il~~~~  174 (443)
T PF04053_consen  146 AVKYVIWSDDGELVALVTKDSIYILKYNL  174 (443)
T ss_dssp             E-EEEEE-TTSSEEEEE-S-SEEEEEE-H
T ss_pred             CCcEEEEECCCCEEEEEeCCeEEEEEecc
Confidence            377788886633  345566778874444

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.56  E-value=0.0088  Score=35.98  Aligned_cols=34  Identities=9%  Similarity=0.120  Sum_probs=29.8

Q ss_pred             CCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE
Q psy8430         271 SNVVIAADWLSDGEQVITASWDRVANLFDVETGTI  305 (361)
Q Consensus       271 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~  305 (361)
                      ...|..++|+|....++.++.+|.|.++.+ +++.
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr   44 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR   44 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence            456889999999999999999999999998 4543

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=96.54  E-value=0.066  Score=52.59  Aligned_cols=143  Identities=13%  Similarity=0.094  Sum_probs=88.9

Q ss_pred             CCEEEEE-eCCCcEEEEeCCCCeEEEEEeCCCCC-eEEEEEec-----CCCEEEEEECCCcEEEEeccccccccCCCCCC
Q psy8430         173 QPVLGSA-SADRTVRLWSTQTGKCVLQYSGHSGS-VNSVRFLP-----NKDLVLSASGDKSVHIWQAVINWECLNNDNDS  245 (361)
Q Consensus       173 ~~~l~s~-s~d~~i~~wd~~~~~~~~~~~~h~~~-v~~v~~~~-----~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~  245 (361)
                      .++|+.. .....++-.|+..|+.+..|..|... |..++-..     .....+.|-.+..+..||.|.....       
T Consensus       493 ~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k-------  565 (794)
T PF08553_consen  493 RNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNK-------  565 (794)
T ss_pred             cceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCc-------
Confidence            3444443 34578999999999999999977654 55543221     1334566778889999998853100       


Q ss_pred             CCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCC
Q psy8430         246 DLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYY  325 (361)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~  325 (361)
                                   ......+.+ .......+++-+.+| +||.|+.+|.||+||--..+....+.+-..+|..+-+|.++
T Consensus       566 -------------~v~~~~k~Y-~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DG  630 (794)
T PF08553_consen  566 -------------LVDSQSKQY-SSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADG  630 (794)
T ss_pred             -------------eeecccccc-ccCCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCC
Confidence                         000011111 223445566665555 89999999999999943223333455667888887777664


Q ss_pred             Ccc--cCCCeEEEE
Q psy8430         326 SKV--SCDLFQRIQ  337 (361)
Q Consensus       326 ~~v--~~dg~i~iW  337 (361)
                      -.|  ..+..+-|+
T Consensus       631 kwilaTc~tyLlLi  644 (794)
T PF08553_consen  631 KWILATCKTYLLLI  644 (794)
T ss_pred             cEEEEeecceEEEE
Confidence            432  356666676

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG2079|consensus

Probab=96.45  E-value=0.013  Score=57.81  Aligned_cols=75  Identities=23%  Similarity=0.345  Sum_probs=59.0

Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEE---ecCCCEEEEEECCCcEEEEeccccc
Q psy8430         160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF---LPNKDLVLSASGDKSVHIWQAVINW  236 (361)
Q Consensus       160 h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~---~~~~~~l~s~~~d~~i~lwd~~~~~  236 (361)
                      -.++|++++|+.+|..++.|-.+|.|.+||++.++.++.+..|..++..+-+   ..++..++++...|.  +|.+.-.+
T Consensus       129 v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~lv~nk  206 (1206)
T KOG2079|consen  129 VQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKLVFNK  206 (1206)
T ss_pred             cCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc--eEEEEech
Confidence            3589999999999999999999999999999999988888767666555544   345556778777776  66655443

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=96.39  E-value=0.76  Score=42.35  Aligned_cols=53  Identities=8%  Similarity=0.030  Sum_probs=39.8

Q ss_pred             CcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecC-CCCCeEEEEEcC
Q psy8430         272 NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH-DEEPHILCVSSY  324 (361)
Q Consensus       272 ~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h-~~~v~~~~~s~s  324 (361)
                      +++..+++||+|++++.-..+|.+.+....-.+.+..+... ......+.+.|+
T Consensus       217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~  270 (410)
T PF04841_consen  217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGN  270 (410)
T ss_pred             CCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECC
Confidence            57999999999999999999999999887766666666543 234444555554

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=96.35  E-value=0.84  Score=42.15  Aligned_cols=113  Identities=17%  Similarity=0.150  Sum_probs=69.4

Q ss_pred             EEEEEcCCCCEEEEE-eCCC----cEEEEeCCCCeEEEEE-eCCCCCeEEEEEecCCCEEEEEECCC-----------cE
Q psy8430         165 WDVAVRPGQPVLGSA-SADR----TVRLWSTQTGKCVLQY-SGHSGSVNSVRFLPNKDLVLSASGDK-----------SV  227 (361)
Q Consensus       165 ~~l~~~~~~~~l~s~-s~d~----~i~~wd~~~~~~~~~~-~~h~~~v~~v~~~~~~~~l~s~~~d~-----------~i  227 (361)
                      ....++|+|+++|-+ +..|    +++++|+.+|+.+..- ..  ..-..+.|.++++.|+-...+.           .|
T Consensus       127 ~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~--~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v  204 (414)
T PF02897_consen  127 GGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIEN--PKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQV  204 (414)
T ss_dssp             EEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEE--EESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEE
T ss_pred             eeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccc--cccceEEEeCCCCEEEEEEeCcccccccCCCCcEE
Confidence            357799999987765 3434    5999999999765432 21  1122399999988876665433           36


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCC--cEEEEEEcCCCCEEEEEeCC----CcEEEeeCC
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSN--VVIAADWLSDGEQVITASWD----RVANLFDVE  301 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~s~~~d----~~v~iwd~~  301 (361)
                      ..|.+.+...                        .....+.....  ....+..++++++++..+..    ..+++.|+.
T Consensus       205 ~~~~~gt~~~------------------------~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~  260 (414)
T PF02897_consen  205 YRHKLGTPQS------------------------EDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLD  260 (414)
T ss_dssp             EEEETTS-GG------------------------G-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECC
T ss_pred             EEEECCCChH------------------------hCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEecc
Confidence            7777654421                        11223333222  26678899999998754332    347788887


Q ss_pred             CC
Q psy8430         302 TG  303 (361)
Q Consensus       302 ~~  303 (361)
                      .+
T Consensus       261 ~~  262 (414)
T PF02897_consen  261 DG  262 (414)
T ss_dssp             CT
T ss_pred             cc
Confidence            64

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=96.35  E-value=0.085  Score=48.57  Aligned_cols=116  Identities=18%  Similarity=0.203  Sum_probs=68.2

Q ss_pred             EEEEcCCCCEEE-EEeCCCc--EEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE-CCCcEEEE--ecccccccc
Q psy8430         166 DVAVRPGQPVLG-SASADRT--VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKSVHIW--QAVINWECL  239 (361)
Q Consensus       166 ~l~~~~~~~~l~-s~s~d~~--i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~~i~lw--d~~~~~~~~  239 (361)
                      .-+|+|||+.|+ +...||.  |.+.|+..+... .+..-.+.-..-.|+|+|+.++-.+ ..|.-.||  ++...    
T Consensus       242 ~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~-~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~----  316 (425)
T COG0823         242 APAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLP-RLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGS----  316 (425)
T ss_pred             CccCCCCCCEEEEEECCCCCccEEEEcCCCCcce-ecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCC----
Confidence            467999999555 4555665  555677655532 2432333334667999999876554 45554444  44322    


Q ss_pred             CCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC-Cc--EEEeeCCCCeEEEEe
Q psy8430         240 NNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-RV--ANLFDVETGTILQSL  309 (361)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-~~--v~iwd~~~~~~~~~~  309 (361)
                                             ....+......-..-.|+|+|++++..+.. |.  |.+.|+.++...+.+
T Consensus       317 -----------------------~~~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~l  366 (425)
T COG0823         317 -----------------------QVTRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRIL  366 (425)
T ss_pred             -----------------------ceeEeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEc
Confidence                                   122333222222266799999999888753 44  667777666544444

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=96.35  E-value=0.19  Score=46.34  Aligned_cols=127  Identities=18%  Similarity=0.226  Sum_probs=78.5

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCCEEEEEeC---C-CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEE-EEECCC
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASA---D-RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDK  225 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~---d-~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~  225 (361)
                      +.....+..-...+..-+|+|++..++-.+.   . ..+.++++.+++...... ..+.-..-+|+|+|+.++ +...||
T Consensus       182 g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~~l~f~~~rdg  260 (425)
T COG0823         182 GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGSKLAFSSSRDG  260 (425)
T ss_pred             CcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCCCEEEEEECCCC
Confidence            4555555556677778889999986555422   2 358899998885443333 233344567999998765 556677


Q ss_pred             cEE--EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC-CCc--EEEeeC
Q psy8430         226 SVH--IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-DRV--ANLFDV  300 (361)
Q Consensus       226 ~i~--lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~~--v~iwd~  300 (361)
                      ...  +.|+..+.                           ...+....+.-..-.|+|+|++++-.+. .|.  |.+.|.
T Consensus       261 ~~~iy~~dl~~~~---------------------------~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~  313 (425)
T COG0823         261 SPDIYLMDLDGKN---------------------------LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDL  313 (425)
T ss_pred             CccEEEEcCCCCc---------------------------ceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECC
Confidence            655  45554431                           2223323333335679999999887654 344  666677


Q ss_pred             CCCeE
Q psy8430         301 ETGTI  305 (361)
Q Consensus       301 ~~~~~  305 (361)
                      +.+..
T Consensus       314 ~g~~~  318 (425)
T COG0823         314 EGSQV  318 (425)
T ss_pred             CCCce
Confidence            75544

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=96.33  E-value=0.56  Score=39.82  Aligned_cols=108  Identities=19%  Similarity=0.184  Sum_probs=69.0

Q ss_pred             eEEEEEc-CCCCEEEEEeCCCcEEEEeCCCCeEEEEEeC-----CCCCeEEEEEecCCCEEEEEECC--------CcEEE
Q psy8430         164 VWDVAVR-PGQPVLGSASADRTVRLWSTQTGKCVLQYSG-----HSGSVNSVRFLPNKDLVLSASGD--------KSVHI  229 (361)
Q Consensus       164 V~~l~~~-~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~-----h~~~v~~v~~~~~~~~l~s~~~d--------~~i~l  229 (361)
                      ...+++. +++ .|+.+..+ .+.++|..+++.......     .....+.+++.|+|++.++....        |.+..
T Consensus        42 ~~G~~~~~~~g-~l~v~~~~-~~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~  119 (246)
T PF08450_consen   42 PNGMAFDRPDG-RLYVADSG-GIAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYR  119 (246)
T ss_dssp             EEEEEEECTTS-EEEEEETT-CEEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEE
T ss_pred             CceEEEEccCC-EEEEEEcC-ceEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEE
Confidence            6677777 665 44455554 445569988854433332     34678899999999988876654        34555


Q ss_pred             EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEE-EEeCCCcEEEeeCC
Q psy8430         230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI-TASWDRVANLFDVE  301 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~d~~v~iwd~~  301 (361)
                      ++.. +                           ....+...-...+.++|+|+++.|+ +-+..+.|..+++.
T Consensus       120 ~~~~-~---------------------------~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~  164 (246)
T PF08450_consen  120 IDPD-G---------------------------KVTVVADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLD  164 (246)
T ss_dssp             EETT-S---------------------------EEEEEEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEEE
T ss_pred             ECCC-C---------------------------eEEEEecCcccccceEECCcchheeecccccceeEEEecc
Confidence            5543 1                           1222223345678999999999776 55667888888885

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG1916|consensus

Probab=96.29  E-value=0.0014  Score=63.02  Aligned_cols=149  Identities=19%  Similarity=0.120  Sum_probs=88.6

Q ss_pred             CeEEEEEcC---CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEE-----------EecCCCEEEEEECCCcEE
Q psy8430         163 GVWDVAVRP---GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR-----------FLPNKDLVLSASGDKSVH  228 (361)
Q Consensus       163 ~V~~l~~~~---~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~-----------~~~~~~~l~s~~~d~~i~  228 (361)
                      .+.-+.|.|   +.-++..+-.+++|++.+++.... ..+.+|...+..++           .+|||+.|+.++.||.++
T Consensus       182 ~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~  260 (1283)
T KOG1916|consen  182 DPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVG  260 (1283)
T ss_pred             CcceeeecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccc
Confidence            344445554   566888888889998877654321 33445766665554           488999999999999999


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCC-c-EEEEEEcCCC---------CEEEEEeC-CCcEE
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSN-V-VIAADWLSDG---------EQVITASW-DRVAN  296 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-v~~~~~~~~~---------~~l~s~~~-d~~v~  296 (361)
                      +|.+-..                     ......+......|.+ + |..+ |+.+.         .++++++. ...++
T Consensus       261 f~Qiyi~---------------------g~~~~rclhewkphd~~p~vC~l-c~~~~~~~v~i~~w~~~Itttd~nre~k  318 (1283)
T KOG1916|consen  261 FYQIYIT---------------------GKIVHRCLHEWKPHDKHPRVCWL-CHKQEILVVSIGKWVLRITTTDVNREEK  318 (1283)
T ss_pred             eeeeeee---------------------ccccHhhhhccCCCCCCCceeee-eccccccCCccceeEEEEecccCCccee
Confidence            9976422                     1122234555555552 2 2222 33221         23455544 45589


Q ss_pred             EeeCCCCeEE--------EEeecCCCCCeE---------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         297 LFDVETGTIL--------QSLTGHDEEPHI---------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       297 iwd~~~~~~~--------~~~~~h~~~v~~---------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      +|....-+|+        ....-|++.|..         .+++.+     -|+.|++|  --
T Consensus       319 ~w~~a~w~Cll~~~~d~v~iV~p~~~~v~~~~~~~~~~~~~v~r~-----v~~~i~~~--qn  373 (1283)
T KOG1916|consen  319 FWAEAPWQCLLDKLIDGVQIVGPHDGEVTDLSMCQWMTTRLVSRS-----VDGTIKIW--QN  373 (1283)
T ss_pred             EeeccchhhhhhhcccceEeecCCCccccchhhhHHHHHHHHHhh-----hHHHHHHh--hc
Confidence            9987766665        222335555554         234445     78899999  55

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=96.24  E-value=0.92  Score=41.44  Aligned_cols=81  Identities=9%  Similarity=0.077  Sum_probs=56.9

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe--C------CCCCeEEEEEec-----CC---
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS--G------HSGSVNSVRFLP-----NK---  215 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~--~------h~~~v~~v~~~~-----~~---  215 (361)
                      .+..-+...+++|++++.+.-| ++|.|..+|.+.|.|++....+..-.  .      ....|+++.|..     |+   
T Consensus        77 ~P~~l~~~~~g~vtal~~S~iG-Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySS  155 (395)
T PF08596_consen   77 LPLTLLDAKQGPVTALKNSDIG-FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSS  155 (395)
T ss_dssp             EEEEEE---S-SEEEEEE-BTS-EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEE
T ss_pred             CchhheeccCCcEeEEecCCCc-EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccc
Confidence            4455566679999999998666 99999999999999998777665522  1      235788999974     22   


Q ss_pred             CEEEEEECCCcEEEEecc
Q psy8430         216 DLVLSASGDKSVHIWQAV  233 (361)
Q Consensus       216 ~~l~s~~~d~~i~lwd~~  233 (361)
                      -.+++|...|.+.+|.+.
T Consensus       156 i~L~vGTn~G~v~~fkIl  173 (395)
T PF08596_consen  156 ICLLVGTNSGNVLTFKIL  173 (395)
T ss_dssp             EEEEEEETTSEEEEEEEE
T ss_pred             eEEEEEeCCCCEEEEEEe
Confidence            368889999999999874

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=96.22  E-value=0.29  Score=44.92  Aligned_cols=108  Identities=14%  Similarity=0.060  Sum_probs=68.4

Q ss_pred             CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCC----------CeE-EEEEecCCCEEEEEECCCcEEEEeccccccccCC
Q psy8430         173 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSG----------SVN-SVRFLPNKDLVLSASGDKSVHIWQAVINWECLNN  241 (361)
Q Consensus       173 ~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~----------~v~-~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~  241 (361)
                      +..++.++.++.+.-+|..+|+.+-.......          .+. .+..  .+..++.++.++.+.-+|..+++.....
T Consensus        69 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~  146 (394)
T PRK11138         69 YNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTV--AGGKVYIGSEKGQVYALNAEDGEVAWQT  146 (394)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEE--ECCEEEEEcCCCEEEEEECCCCCCcccc
Confidence            55778888889999999999987765542210          000 0111  3556777888999999999888543221


Q ss_pred             CCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430         242 DNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~  310 (361)
                      ..                   . ..  ....++    +  .+..++.++.++.++.+|..+|+.+-.+.
T Consensus       147 ~~-------------------~-~~--~~ssP~----v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~  187 (394)
T PRK11138        147 KV-------------------A-GE--ALSRPV----V--SDGLVLVHTSNGMLQALNESDGAVKWTVN  187 (394)
T ss_pred             cC-------------------C-Cc--eecCCE----E--ECCEEEEECCCCEEEEEEccCCCEeeeec
Confidence            10                   0 00  011111    1  24567778888999999999999876664

>KOG4499|consensus

Probab=96.17  E-value=0.25  Score=40.65  Aligned_cols=141  Identities=16%  Similarity=0.113  Sum_probs=86.6

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCC---------CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEE-EEECCCcEEEE
Q psy8430         161 RDGVWDVAVRPGQPVLGSASAD---------RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW  230 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~d---------~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~~i~lw  230 (361)
                      ....++-..+|+|++++-.-.|         |.++.|-.. ++ +..+...-+.-+.++|+.+.+.+. +-+.+-.|.-|
T Consensus       108 knR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~-h~-v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~  185 (310)
T KOG4499|consen  108 KNRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAG-HQ-VELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDAY  185 (310)
T ss_pred             hcccccCccCCCCceeeeeeccccccccccccEEEEeccC-CC-ceeeehhccCCccccccccCcEEEEEccCceEEeee
Confidence            3556677789999985544333         223333321 11 222222344556788987766654 45667778778


Q ss_pred             e--ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC----CCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCe
Q psy8430         231 Q--AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG----HSNVVIAADWLSDGEQVITASWDRVANLFDVETGT  304 (361)
Q Consensus       231 d--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~  304 (361)
                      |  ..++..                     ..+..+..+..    .....-.+++...|...+++-..++|...|..+|+
T Consensus       186 dyd~~tG~~---------------------snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK  244 (310)
T KOG4499|consen  186 DYDCPTGDL---------------------SNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGK  244 (310)
T ss_pred             ecCCCcccc---------------------cCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCc
Confidence            7  444311                     11122222221    11122345556688888888888999999999999


Q ss_pred             EEEEeecCCCCCeEEEEEcC
Q psy8430         305 ILQSLTGHDEEPHILCVSSY  324 (361)
Q Consensus       305 ~~~~~~~h~~~v~~~~~s~s  324 (361)
                      .+..+.-.+..+++.++.|-
T Consensus       245 ~L~eiklPt~qitsccFgGk  264 (310)
T KOG4499|consen  245 ILLEIKLPTPQITSCCFGGK  264 (310)
T ss_pred             EEEEEEcCCCceEEEEecCC
Confidence            99999988888888776664

>KOG1916|consensus

Probab=96.16  E-value=0.0061  Score=58.85  Aligned_cols=128  Identities=16%  Similarity=0.156  Sum_probs=77.5

Q ss_pred             eeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCC--CCeE-----EEEEeCCCCCeEEEEEec---CCCEEEEEECCC
Q psy8430         157 FSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQ--TGKC-----VLQYSGHSGSVNSVRFLP---NKDLVLSASGDK  225 (361)
Q Consensus       157 l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~--~~~~-----~~~~~~h~~~v~~v~~~~---~~~~l~s~~~d~  225 (361)
                      ++|..|.|-.+.|.. +-..+.  -.-|.+.+||++  .|+.     +.........+.-|.|+|   +.-++..+-.++
T Consensus       128 ~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~  205 (1283)
T KOG1916|consen  128 AKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGG  205 (1283)
T ss_pred             HhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCC
Confidence            346778888888754 222222  223578889875  2322     222223445556677776   445566667788


Q ss_pred             cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEE-----------EEcCCCCEEEEEeCCCc
Q psy8430         226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAA-----------DWLSDGEQVITASWDRV  294 (361)
Q Consensus       226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-----------~~~~~~~~l~s~~~d~~  294 (361)
                      .+++.++.....                           .-+.+|..++..+           ..+|||+.++.++.||.
T Consensus       206 ~i~lL~~~ra~~---------------------------~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~  258 (1283)
T KOG1916|consen  206 EIRLLNINRALR---------------------------SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGS  258 (1283)
T ss_pred             ceeEeeechHHH---------------------------HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCc
Confidence            888876643311                           1222344333322           37999999999999999


Q ss_pred             EEEeeCC-----CCeEEEEeecCC
Q psy8430         295 ANLFDVE-----TGTILQSLTGHD  313 (361)
Q Consensus       295 v~iwd~~-----~~~~~~~~~~h~  313 (361)
                      ++.|.+.     ..+|+..|+.|+
T Consensus       259 v~f~Qiyi~g~~~~rclhewkphd  282 (1283)
T KOG1916|consen  259 VGFYQIYITGKIVHRCLHEWKPHD  282 (1283)
T ss_pred             cceeeeeeeccccHhhhhccCCCC
Confidence            9888764     335666677676

>KOG2079|consensus

Probab=96.05  E-value=0.034  Score=54.97  Aligned_cols=85  Identities=14%  Similarity=0.147  Sum_probs=65.4

Q ss_pred             CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC
Q psy8430         214 NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR  293 (361)
Q Consensus       214 ~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~  293 (361)
                      .+..++.|+..|.+...|...+-                         .+...-..-.++|++++|+.+|..++.|-.+|
T Consensus        98 ~~~~ivi~Ts~ghvl~~d~~~nL-------------------------~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G  152 (1206)
T KOG2079|consen   98 VVVPIVIGTSHGHVLLSDMTGNL-------------------------GPLHQNERVQGPVTSVAFNQDGSLLLAGLGDG  152 (1206)
T ss_pred             eeeeEEEEcCchhhhhhhhhccc-------------------------chhhcCCccCCcceeeEecCCCceeccccCCC
Confidence            45567888888888888875420                         01122223457999999999999999999999


Q ss_pred             cEEEeeCCCCeEEEEeecCCCCCeEEEEEc
Q psy8430         294 VANLFDVETGTILQSLTGHDEEPHILCVSS  323 (361)
Q Consensus       294 ~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~  323 (361)
                      -|.+||+..++.++.+..|..+.+.++...
T Consensus       153 ~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~  182 (1206)
T KOG2079|consen  153 HVTVWDMHRAKILKVITEHGAPVTGVIFVG  182 (1206)
T ss_pred             cEEEEEccCCcceeeeeecCCccceEEEEE
Confidence            999999999999999988888888754443

>KOG2444|consensus

Probab=96.01  E-value=0.066  Score=43.72  Aligned_cols=135  Identities=15%  Similarity=0.078  Sum_probs=78.1

Q ss_pred             EEEEEeCCCcEEEEeCCCCeEE-EEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCC
Q psy8430         175 VLGSASADRTVRLWSTQTGKCV-LQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEP  253 (361)
Q Consensus       175 ~l~s~s~d~~i~~wd~~~~~~~-~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~  253 (361)
                      .+..-+.|+.|+-++++.-+.. +.-.-|...-.-+.   -+..++.|+.||.|.+|+......                
T Consensus        32 ~l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~~~v~~---~~~~~~vG~~dg~v~~~n~n~~g~----------------   92 (238)
T KOG2444|consen   32 LLRATSADGLVRERKVRKHKESCRSERFIDEGQRVVT---ASAKLMVGTSDGAVYVFNWNLEGA----------------   92 (238)
T ss_pred             hhccccCCcccccchhhhhhhhhhhhhhhhcceeecc---cCceEEeecccceEEEecCCccch----------------
Confidence            4455567788877776533210 00011211111111   355688999999999998652110                


Q ss_pred             CCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCC-CCCeEEEEEcCCCc----
Q psy8430         254 DESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD-EEPHILCVSSYYSK----  327 (361)
Q Consensus       254 ~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~-~~v~~~~~s~s~~~----  327 (361)
                               ..... .+-......+.--.++.+..+++.||.|+.|++.-++.+.....|+ .+...++++++.-+    
T Consensus        93 ---------~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a  163 (238)
T KOG2444|consen   93 ---------HSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIA  163 (238)
T ss_pred             ---------HHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEee
Confidence                     00011 1111222223333356688899999999999999888888887787 56666666665221    


Q ss_pred             -ccCCCeEEEE
Q psy8430         328 -VSCDLFQRIQ  337 (361)
Q Consensus       328 -v~~dg~i~iW  337 (361)
                       .+.|..++.|
T Consensus       164 ~~S~d~~~k~W  174 (238)
T KOG2444|consen  164 DTSHDRVLKKW  174 (238)
T ss_pred             ccccchhhhhc
Confidence             2577777777

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=95.92  E-value=0.5  Score=45.40  Aligned_cols=126  Identities=14%  Similarity=0.243  Sum_probs=76.2

Q ss_pred             EeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe-CCCCCeEEEEEe--cCCCEEEEEECCCcEEEEec
Q psy8430         156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFL--PNKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       156 ~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~-~h~~~v~~v~~~--~~~~~l~s~~~d~~i~lwd~  232 (361)
                      ++........-+.-+.-+..-+.-+.-.++.|||...+.....-. ...+.|.++.|.  |+++.+++.+..+.|.++.-
T Consensus        24 ~~~T~i~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q  103 (631)
T PF12234_consen   24 TFETGISNPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQ  103 (631)
T ss_pred             EEecCCCCcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEc
Confidence            333334444455555544433333444579999998876332221 357899999996  48899999999999999853


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceecccccEEE--eCCC-CcEEEEEEcCCCCEEEEEeCCCcEEEeeC
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKEL--LGHS-NVVIAADWLSDGEQVITASWDRVANLFDV  300 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~v~~~~~~~~~~~l~s~~~d~~v~iwd~  300 (361)
                      ......                 ...+.+.++..+  ..|+ .+|....|.++|..++.++  +.+.|+|-
T Consensus       104 ~R~dy~-----------------~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk  155 (631)
T PF12234_consen  104 LRYDYT-----------------NKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDK  155 (631)
T ss_pred             cchhhh-----------------cCCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECC
Confidence            210000                 011122233333  3343 5788999999997665554  66778764

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>KOG2395|consensus

Probab=95.89  E-value=0.13  Score=47.12  Aligned_cols=124  Identities=13%  Similarity=0.137  Sum_probs=80.5

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCC-------EEEEEeCCCcEEEEeCCCC-e-EEEEEeCCC----CCeEEEEEecCC
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQP-------VLGSASADRTVRLWSTQTG-K-CVLQYSGHS----GSVNSVRFLPNK  215 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~-------~l~s~s~d~~i~~wd~~~~-~-~~~~~~~h~----~~v~~v~~~~~~  215 (361)
                      ..++.+.+++-|.. |+-+.+.|+..       .-+.|=.|+.|.-||.+-. . .+..-++|.    ..-.|.+-- ..
T Consensus       364 E~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT-~s  441 (644)
T KOG2395|consen  364 ERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATT-ES  441 (644)
T ss_pred             ccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccccccccccceeeec-CC
Confidence            55666666666665 77777777643       2234556888999998742 2 233333332    122233222 34


Q ss_pred             CEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcE
Q psy8430         216 DLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVA  295 (361)
Q Consensus       216 ~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v  295 (361)
                      -+++.||.+|.|++||- .+                         ......+.+-..+|..+..+.+|+++++.+ +..+
T Consensus       442 G~IvvgS~~GdIRLYdr-i~-------------------------~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyL  494 (644)
T KOG2395|consen  442 GYIVVGSLKGDIRLYDR-IG-------------------------RRAKTALPGLGDAIKHVDVTADGKWILATC-KTYL  494 (644)
T ss_pred             ceEEEeecCCcEEeehh-hh-------------------------hhhhhcccccCCceeeEEeeccCcEEEEec-ccEE
Confidence            57889999999999985 22                         123445667788999999999999998876 4666


Q ss_pred             EEeeCC
Q psy8430         296 NLFDVE  301 (361)
Q Consensus       296 ~iwd~~  301 (361)
                      .+.|+.
T Consensus       495 lLi~t~  500 (644)
T KOG2395|consen  495 LLIDTL  500 (644)
T ss_pred             EEEEEe
Confidence            666643

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=95.78  E-value=0.93  Score=38.45  Aligned_cols=126  Identities=15%  Similarity=0.201  Sum_probs=75.3

Q ss_pred             EEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCC-CCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430         155 RSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGH-SGSVNSVRFLPNKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~  232 (361)
                      +.+.+-...++.|+|+|+.+ +++.....+.|...+. .|+.+..+.-. .+-.-.|++..++.++++.-.++.+.++++
T Consensus        15 ~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~   93 (248)
T PF06977_consen   15 KPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTI   93 (248)
T ss_dssp             EE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE
T ss_pred             eECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEE
Confidence            45556667799999999755 6666666778877886 57777776533 356788889877777776667899999988


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceecccccEEE-----eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCC
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKEL-----LGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  301 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~  301 (361)
                      .......                   .. .....+     ..+...+-.++|+|.++.|+.+....-..+|.+.
T Consensus        94 ~~~~~~~-------------------~~-~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~  147 (248)
T PF06977_consen   94 DDDTTSL-------------------DR-ADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVN  147 (248)
T ss_dssp             ----TT---------------------E-EEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred             ecccccc-------------------ch-hhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEc
Confidence            4332110                   00 011111     1345678999999988888888777666666654

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>KOG3621|consensus

Probab=95.63  E-value=0.033  Score=52.51  Aligned_cols=76  Identities=12%  Similarity=0.047  Sum_probs=60.6

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE--E---E-eCCCCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL--Q---Y-SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~--~---~-~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~  232 (361)
                      +-.+.+..+..+++..++|.|+..|.|.++-+..+.+..  .   + ..|...|++++|++++..+++|..-|+|.+-.+
T Consensus        74 ~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L  153 (726)
T KOG3621|consen   74 GATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTEL  153 (726)
T ss_pred             CccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEe
Confidence            345666677899999899999999999999887642211  1   1 247889999999999999999999999998877


Q ss_pred             cc
Q psy8430         233 VI  234 (361)
Q Consensus       233 ~~  234 (361)
                      .+
T Consensus       154 ~s  155 (726)
T KOG3621|consen  154 DS  155 (726)
T ss_pred             ch
Confidence            65

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=95.52  E-value=0.56  Score=41.64  Aligned_cols=120  Identities=16%  Similarity=0.094  Sum_probs=74.2

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe-EEEEEe-CCCCCeEEEEEecCCCEEEEEECCCcEE
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-CVLQYS-GHSGSVNSVRFLPNKDLVLSASGDKSVH  228 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~-~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d~~i~  228 (361)
                      .+.+... ...++|++++-- ++ .|+.|. .+.|.+|++...+ ....-. .....+.++...  +++++.|...+.+.
T Consensus        79 l~~i~~~-~~~g~V~ai~~~-~~-~lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~  152 (321)
T PF03178_consen   79 LKLIHST-EVKGPVTAICSF-NG-RLVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSVS  152 (321)
T ss_dssp             EEEEEEE-EESS-EEEEEEE-TT-EEEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEE
T ss_pred             EEEEEEE-eecCcceEhhhh-CC-EEEEee-cCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEEEEcccCEE
Confidence            3444433 357999999855 34 444443 4799999998776 333322 223356666554  66999998888888


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE--eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCC
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL--LGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  301 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~  301 (361)
                      ++..+...                         ..+..+  ......++++.|-++++.++.+..+|.+.++...
T Consensus       153 ~~~~~~~~-------------------------~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~  202 (321)
T PF03178_consen  153 LLRYDEEN-------------------------NKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN  202 (321)
T ss_dssp             EEEEETTT-------------------------E-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred             EEEEEccC-------------------------CEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence            87543210                         011111  2235568889898777899999999999998765

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=95.39  E-value=0.53  Score=42.97  Aligned_cols=103  Identities=18%  Similarity=0.102  Sum_probs=59.8

Q ss_pred             CeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCC----------------CCCC-CCCCceecccccEEE
Q psy8430         205 SVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLD----------------ESKE-PDESSITLRTPVKEL  267 (361)
Q Consensus       205 ~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~----------------~~~~-~~~~~~~~~~~~~~~  267 (361)
                      .|..+.|+++..-|+.+...|.|.||.....+.-.........+                +... ........-.|...+
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence            58899999998999999999999999876553322000000000                0000 000001112345555


Q ss_pred             eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEE
Q psy8430         268 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS  308 (361)
Q Consensus       268 ~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~  308 (361)
                      ....++|++++.| +=.+++.|..+|.+.|.|+|....+..
T Consensus        83 ~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~  122 (395)
T PF08596_consen   83 DAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYN  122 (395)
T ss_dssp             ---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred             eccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEee
Confidence            6668999999997 556999999999999999997776654

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PRK13616 lipoprotein LpqB; Provisional

Probab=95.37  E-value=0.22  Score=47.99  Aligned_cols=117  Identities=14%  Similarity=0.157  Sum_probs=65.5

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEe------CCCcEEEEeCC-CCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCc-EEEE
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSAS------ADRTVRLWSTQ-TGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS-VHIW  230 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s------~d~~i~~wd~~-~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~-i~lw  230 (361)
                      +....+...+++|+|..++..-      .|+.-.||-.. .+.......+  .....-.|+|+|..+++.+.... +++.
T Consensus       347 g~~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt~g--~~~t~PsWspDG~~lw~v~dg~~~~~v~  424 (591)
T PRK13616        347 GQMGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVLEG--HSLTRPSWSLDADAVWVVVDGNTVVRVI  424 (591)
T ss_pred             ccccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeeecC--CCCCCceECCCCCceEEEecCcceEEEe
Confidence            3335678899999999877665      35444444332 2332222233  34788899999998887764322 2332


Q ss_pred             eccccccccCCCCCCCCCCCCCCCCCceeccc-ccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy8430         231 QAVINWECLNNDNDSDLDESKEPDESSITLRT-PVKELLGHSNVVIAADWLSDGEQVITASWDRVANL  297 (361)
Q Consensus       231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~i  297 (361)
                      +-.....+.                 ...... ....  .....|..+.|||||..++... ++.|++
T Consensus       425 ~~~~~gql~-----------------~~~vd~ge~~~--~~~g~Issl~wSpDG~RiA~i~-~g~v~V  472 (591)
T PRK13616        425 RDPATGQLA-----------------RTPVDASAVAS--RVPGPISELQLSRDGVRAAMII-GGKVYL  472 (591)
T ss_pred             ccCCCceEE-----------------EEeccCchhhh--ccCCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence            211100000                 000000 0011  2345799999999999988776 467776

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=95.27  E-value=1.4  Score=40.15  Aligned_cols=123  Identities=21%  Similarity=0.190  Sum_probs=83.7

Q ss_pred             CeEEEEEcCCCCEEEEEeC---CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE-CCCcEEEEeccccccc
Q psy8430         163 GVWDVAVRPGQPVLGSASA---DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKSVHIWQAVINWEC  238 (361)
Q Consensus       163 ~V~~l~~~~~~~~l~s~s~---d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~~i~lwd~~~~~~~  238 (361)
                      ....++++|++..+..+..   ++++.+.|..+++.+.....-..+ ..+++.|+|..++.+. .++.+.+.|.......
T Consensus       117 ~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~  195 (381)
T COG3391         117 GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVV  195 (381)
T ss_pred             CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCccee
Confidence            4567899999986666655   689999999888887775532234 8999999999665554 7889999996544211


Q ss_pred             cCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC---CcEEEeeCCCCeEEEE
Q psy8430         239 LNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD---RVANLFDVETGTILQS  308 (361)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~v~iwd~~~~~~~~~  308 (361)
                      .                     . .......-...-..+.++|+|.+++.....   +.+...|..++.....
T Consensus       196 ~---------------------~-~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~  246 (381)
T COG3391         196 R---------------------G-SVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTAT  246 (381)
T ss_pred             c---------------------c-ccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEe
Confidence            0                     0 000011222334557899999977766554   5899999988776655

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.20  E-value=0.54  Score=40.18  Aligned_cols=129  Identities=10%  Similarity=0.172  Sum_probs=88.6

Q ss_pred             eeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCC-CCCeEEEEEecCCCEEEEEECCCcEEEEecccc
Q psy8430         157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGH-SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN  235 (361)
Q Consensus       157 l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~  235 (361)
                      +.|-...|+++.|+|+.+.|++......-.+|=...|+.+.++.-. -.-.-.|.|..+++++++--.++.+.++.+...
T Consensus        81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~  160 (316)
T COG3204          81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDAD  160 (316)
T ss_pred             cccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCC
Confidence            4455566999999999999999888888888877789888887521 233456778877888887778888988877644


Q ss_pred             ccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCC
Q psy8430         236 WECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  301 (361)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~  301 (361)
                      ..+.....                ..-+.............++|+|....|+.+-.-.-+.||.+.
T Consensus       161 t~~~~~~~----------------~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~  210 (316)
T COG3204         161 TTVISAKV----------------QKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVT  210 (316)
T ss_pred             ccEEeccc----------------eEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEe
Confidence            32211000                000111111224567789999988888888887777777665

>PRK13616 lipoprotein LpqB; Provisional

Probab=95.17  E-value=0.59  Score=45.11  Aligned_cols=115  Identities=9%  Similarity=0.045  Sum_probs=63.5

Q ss_pred             eEEEEEcCCCCEEEEEeCC------------CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430         164 VWDVAVRPGQPVLGSASAD------------RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       164 V~~l~~~~~~~~l~s~s~d------------~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd  231 (361)
                      .+.-.|+|+|..|.+.+..            +.+.+.+++.+....   ...+.|..+.|+|||..++... ++.|.+=-
T Consensus       399 ~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~  474 (591)
T PRK13616        399 LTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAV  474 (591)
T ss_pred             CCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEE
Confidence            7778899998877776532            222222333332222   2356799999999999887765 46666632


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCC
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  301 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~  301 (361)
                      +....                  ........+.....+-...+.++.|..++.++ .+..++...+|.+.
T Consensus       475 Vvr~~------------------~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v~  525 (591)
T PRK13616        475 VEQTE------------------DGQYALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYVN  525 (591)
T ss_pred             EEeCC------------------CCceeecccEEeecccCCccccceEecCCEEE-EEecCCCCceEEEe
Confidence            21110                  00011111111112233446889999988855 55555555556543

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=95.11  E-value=0.75  Score=40.22  Aligned_cols=155  Identities=10%  Similarity=0.033  Sum_probs=74.4

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccc
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC  238 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~  238 (361)
                      +-.+.+..+.-+++|.+++.++.-....-||--...-...-......|.++.|.|++.+.+. ...|.|++=+.....  
T Consensus       142 ~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~-~~Gg~~~~s~~~~~~--  218 (302)
T PF14870_consen  142 ETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWML-ARGGQIQFSDDPDDG--  218 (302)
T ss_dssp             S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEE-ETTTEEEEEE-TTEE--
T ss_pred             CCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEE-eCCcEEEEccCCCCc--
Confidence            44588999999999998888866666667885322111122235689999999999777664 488888877621110  


Q ss_pred             cCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec---CCCC
Q psy8430         239 LNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG---HDEE  315 (361)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~---h~~~  315 (361)
                                         .....+........-.+..++|.+++...++|+. |.+ +.....|+.=+.-..   -..-
T Consensus       219 -------------------~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~-G~l-~~S~DgGktW~~~~~~~~~~~n  277 (302)
T PF14870_consen  219 -------------------ETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGS-GTL-LVSTDGGKTWQKDRVGENVPSN  277 (302)
T ss_dssp             -------------------EEE---B-TTSS--S-EEEEEESSSS-EEEEEST-T-E-EEESSTTSS-EE-GGGTTSSS-
T ss_pred             -------------------cccccccCCcccCceeeEEEEecCCCCEEEEeCC-ccE-EEeCCCCccceECccccCCCCc
Confidence                               0000111111122334789999988877776665 544 334445554333322   1222


Q ss_pred             CeEEEEEcC--CCcccCCCeEEEE
Q psy8430         316 PHILCVSSY--YSKVSCDLFQRIQ  337 (361)
Q Consensus       316 v~~~~~s~s--~~~v~~dg~i~iW  337 (361)
                      .+.+.+...  ...++.+|.|-=|
T Consensus       278 ~~~i~f~~~~~gf~lG~~G~ll~~  301 (302)
T PF14870_consen  278 LYRIVFVNPDKGFVLGQDGVLLRY  301 (302)
T ss_dssp             --EEEEEETTEEEEE-STTEEEEE
T ss_pred             eEEEEEcCCCceEEECCCcEEEEe
Confidence            334444433  3345677776444

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=95.06  E-value=1.9  Score=37.25  Aligned_cols=151  Identities=10%  Similarity=0.048  Sum_probs=80.6

Q ss_pred             CCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCC
Q psy8430         171 PGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDES  250 (361)
Q Consensus       171 ~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~  250 (361)
                      ..++.|+.|..+| +.+++.........+. +...|..+...|+-+.++.-+ |+.+.++++..-.........      
T Consensus         5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~-~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~------   75 (275)
T PF00780_consen    5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRIL-KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPL------   75 (275)
T ss_pred             cCCCEEEEEECCC-EEEEEecCCccceeEe-ecceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccc------
Confidence            4577899999888 8899983332222222 334499999999888777665 599999998654322110000      


Q ss_pred             CCCCCCceecccccEEEeCCCCcEEEEE--EcCCCCEEEEEeCCCcEEEeeCCCC-----eEEEEeecCCCCCeEEEEEc
Q psy8430         251 KEPDESSITLRTPVKELLGHSNVVIAAD--WLSDGEQVITASWDRVANLFDVETG-----TILQSLTGHDEEPHILCVSS  323 (361)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~s~~~d~~v~iwd~~~~-----~~~~~~~~h~~~v~~~~~s~  323 (361)
                            .................+...+  -.+.+...++......|.+|.....     ...+.+.- ...+..+.+.+
T Consensus        76 ------~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~l-p~~~~~i~~~~  148 (275)
T PF00780_consen   76 ------AFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISL-PDPPSSIAFLG  148 (275)
T ss_pred             ------cccccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEc-CCCcEEEEEeC
Confidence                  0000000000111222333333  1223444444445568888877642     34455543 35555555555


Q ss_pred             CCCcccCCCeEEEE
Q psy8430         324 YYSKVSCDLFQRIQ  337 (361)
Q Consensus       324 s~~~v~~dg~i~iW  337 (361)
                      +.+.|+......+.
T Consensus       149 ~~i~v~~~~~f~~i  162 (275)
T PF00780_consen  149 NKICVGTSKGFYLI  162 (275)
T ss_pred             CEEEEEeCCceEEE
Confidence            54445545556677

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>KOG2444|consensus

Probab=94.90  E-value=0.11  Score=42.44  Aligned_cols=103  Identities=13%  Similarity=0.109  Sum_probs=61.7

Q ss_pred             eeeeeccceeEEeeecCccceeeeEEeeccCCCeEE-EEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCC-CCeEE
Q psy8430         131 NKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWD-VAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHS-GSVNS  208 (361)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~-l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~-~~v~~  208 (361)
                      ....+.....+..|.+.....-.-+.. .-...|.+ +..-.++.+..+++.||.|+.|++.-++.+.....|. .++..
T Consensus        72 ~~~vG~~dg~v~~~n~n~~g~~~d~~~-s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~  150 (238)
T KOG2444|consen   72 KLMVGTSDGAVYVFNWNLEGAHSDRVC-SGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEE  150 (238)
T ss_pred             eEEeecccceEEEecCCccchHHHhhh-cccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCcce
Confidence            334455566666666653211111111 11222322 2233355688899999999999999888777766676 55555


Q ss_pred             EEEecCCCEEEEE--ECCCcEEEEeccc
Q psy8430         209 VRFLPNKDLVLSA--SGDKSVHIWQAVI  234 (361)
Q Consensus       209 v~~~~~~~~l~s~--~~d~~i~lwd~~~  234 (361)
                      ...+..+..++.+  |.|..++.|++..
T Consensus       151 ~ivv~sd~~i~~a~~S~d~~~k~W~ve~  178 (238)
T KOG2444|consen  151 LIVVGSDEFLKIADTSHDRVLKKWNVEK  178 (238)
T ss_pred             eEEecCCceEEeeccccchhhhhcchhh
Confidence            5555566666666  7777777777653

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=94.84  E-value=2.1  Score=36.67  Aligned_cols=156  Identities=18%  Similarity=0.120  Sum_probs=91.9

Q ss_pred             eccC-CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC--CeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccc
Q psy8430         158 SGHR-DGVWDVAVRPGQPVLGSASADRTVRLWSTQT--GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI  234 (361)
Q Consensus       158 ~~h~-~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~--~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~  234 (361)
                      .||- +.|..+.....-.++..|-.--..-+|+...  ...+...-.-.+.+..+.++  ++++..+..+.-+++.|+.+
T Consensus        38 vghfg~~vsavdv~~~ya~v~qG~~l~i~ditn~~~~t~~~l~~~i~~~~l~~Dv~vs--e~yvyvad~ssGL~IvDIS~  115 (370)
T COG5276          38 VGHFGKGVSAVDVRGAYAYVGQGFILAILDITNVSLQTHDVLLSVINARDLFADVRVS--EEYVYVADWSSGLRIVDIST  115 (370)
T ss_pred             eeeccCCcccccccccccccccCceEeeccccCcccccCcceEEEEehhhhhheeEec--ccEEEEEcCCCceEEEeccC
Confidence            3555 5555565554443443332111233455431  11122222345667788885  55777777777899999976


Q ss_pred             cccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC---eEEEEeec
Q psy8430         235 NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG---TILQSLTG  311 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~---~~~~~~~~  311 (361)
                      ...                       .+.+..+. -.+..+.+..  .|++.+.+..|.-+-+.|+.+.   ....++..
T Consensus       116 P~s-----------------------P~~~~~ln-t~gyaygv~v--sGn~aYVadlddgfLivdvsdpssP~lagrya~  169 (370)
T COG5276         116 PDS-----------------------PTLIGFLN-TDGYAYGVYV--SGNYAYVADLDDGFLIVDVSDPSSPQLAGRYAL  169 (370)
T ss_pred             CCC-----------------------cceecccc-CCceEEEEEe--cCCEEEEeeccCcEEEEECCCCCCceeeeeecc
Confidence            521                       01111111 1244455555  7999999996666778887643   34455655


Q ss_pred             CCCCCeEEEEEcCCCccc-CCCeEEEEcCCCCC
Q psy8430         312 HDEEPHILCVSSYYSKVS-CDLFQRIQHLDCGT  343 (361)
Q Consensus       312 h~~~v~~~~~s~s~~~v~-~dg~i~iW~~d~~~  343 (361)
                      .......+.+||.+.+|+ +|+-+.|-  |+..
T Consensus       170 ~~~d~~~v~ISGn~AYvA~~d~GL~iv--DVSn  200 (370)
T COG5276         170 PGGDTHDVAISGNYAYVAWRDGGLTIV--DVSN  200 (370)
T ss_pred             CCCCceeEEEecCeEEEEEeCCCeEEE--EccC
Confidence            555556688899888887 89999999  8833

>KOG4649|consensus

Probab=94.83  E-value=2.1  Score=36.04  Aligned_cols=64  Identities=8%  Similarity=-0.033  Sum_probs=50.6

Q ss_pred             CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccc
Q psy8430         173 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW  236 (361)
Q Consensus       173 ~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~  236 (361)
                      |++++.|...|.+.+-++++|.....+.....-=......+++..+..++.|++...-|.++..
T Consensus        63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~  126 (354)
T KOG4649|consen   63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYG  126 (354)
T ss_pred             CCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccc
Confidence            6789999999999999999997777776433222233456789999999999999999987653

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=94.69  E-value=0.12  Score=46.66  Aligned_cols=65  Identities=11%  Similarity=0.152  Sum_probs=45.4

Q ss_pred             cCCCCEEEEE---------eCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccc
Q psy8430         170 RPGQPVLGSA---------SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW  236 (361)
Q Consensus       170 ~~~~~~l~s~---------s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~  236 (361)
                      |||+++++..         +..+.+.++|+.+++...... ....+....|+|+|+.++-+. ++.|.+++..++.
T Consensus         1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~-~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~   74 (353)
T PF00930_consen    1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTP-PPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQ   74 (353)
T ss_dssp             -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS--EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSE
T ss_pred             CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcC-CccccccceeecCCCeeEEEe-cCceEEEECCCCC
Confidence            5677766653         224578899999876544333 267888999999999988775 6789999876653

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=94.58  E-value=0.73  Score=42.12  Aligned_cols=53  Identities=11%  Similarity=0.079  Sum_probs=45.1

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCC
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG  204 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~  204 (361)
                      .....|.+....+.+++.+|++.+.++...-|.|.++|+.++..++.|+|..+
T Consensus       298 ~~r~~l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRd  350 (415)
T PF14655_consen  298 PMRFGLPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRD  350 (415)
T ss_pred             ceEEeeccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCcc
Confidence            34556777888899999999999998888889999999999998888887655

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=94.25  E-value=1.5  Score=31.82  Aligned_cols=65  Identities=15%  Similarity=0.216  Sum_probs=44.9

Q ss_pred             eEEEEEec---CC-CEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC
Q psy8430         206 VNSVRFLP---NK-DLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS  281 (361)
Q Consensus       206 v~~v~~~~---~~-~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  281 (361)
                      |.++++..   +| +.|+.||.|..|++|+-.                            ..+..+. -...|.++.-..
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~----------------------------e~~~Ei~-e~~~v~~L~~~~   52 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD----------------------------EIVAEIT-ETDKVTSLCSLG   52 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCC----------------------------cEEEEEe-cccceEEEEEcC
Confidence            66777765   22 469999999999999743                            1344443 345666666654


Q ss_pred             CCCEEEEEeCCCcEEEeeC
Q psy8430         282 DGEQVITASWDRVANLFDV  300 (361)
Q Consensus       282 ~~~~l~s~~~d~~v~iwd~  300 (361)
                      . ..++.+-.+|+|-+|+-
T Consensus        53 ~-~~F~Y~l~NGTVGvY~~   70 (111)
T PF14783_consen   53 G-GRFAYALANGTVGVYDR   70 (111)
T ss_pred             C-CEEEEEecCCEEEEEeC
Confidence            4 56888888888888764

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=94.08  E-value=3.3  Score=35.17  Aligned_cols=145  Identities=10%  Similarity=0.065  Sum_probs=77.6

Q ss_pred             ceeeeEEeecc-CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC------eEEEEEe-----CCCCCeEEEEEecCCCE
Q psy8430         150 SCYKIRSFSGH-RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG------KCVLQYS-----GHSGSVNSVRFLPNKDL  217 (361)
Q Consensus       150 ~~~~~~~l~~h-~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~------~~~~~~~-----~h~~~v~~v~~~~~~~~  217 (361)
                      +++.++++.-. -+..-.|++..++.++++.-.++.+.++++...      .....+.     .+...+-.++|+|.++.
T Consensus        52 ~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~  131 (248)
T PF06977_consen   52 DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNR  131 (248)
T ss_dssp             T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTE
T ss_pred             CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCE
Confidence            35556665432 367889999888877776666899999888332      1112221     24567899999999888


Q ss_pred             EEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC-CCEEEEEeCCCcEE
Q psy8430         218 VLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD-GEQVITASWDRVAN  296 (361)
Q Consensus       218 l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~v~  296 (361)
                      |+.+-...-..++.+.....               .....................+.+++++|. +.+++.......+.
T Consensus       132 L~v~kE~~P~~l~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~  196 (248)
T PF06977_consen  132 LFVAKERKPKRLYEVNGFPG---------------GFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLL  196 (248)
T ss_dssp             EEEEEESSSEEEEEEESTT----------------SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEE
T ss_pred             EEEEeCCCChhhEEEccccC---------------ccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeEE
Confidence            88887776777777653100               000000000011111123345788999995 55666677778899


Q ss_pred             EeeCCCCeEEEEee
Q psy8430         297 LFDVETGTILQSLT  310 (361)
Q Consensus       297 iwd~~~~~~~~~~~  310 (361)
                      .+| .+|+.+..+.
T Consensus       197 ~~d-~~G~~~~~~~  209 (248)
T PF06977_consen  197 ELD-RQGRVVSSLS  209 (248)
T ss_dssp             EE--TT--EEEEEE
T ss_pred             EEC-CCCCEEEEEE
Confidence            999 6688877665

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=94.06  E-value=0.32  Score=28.40  Aligned_cols=32  Identities=19%  Similarity=0.207  Sum_probs=26.5

Q ss_pred             CCeEEEEEcCCC---CEEEEEeCCCcEEEEeCCCC
Q psy8430         162 DGVWDVAVRPGQ---PVLGSASADRTVRLWSTQTG  193 (361)
Q Consensus       162 ~~V~~l~~~~~~---~~l~s~s~d~~i~~wd~~~~  193 (361)
                      ++|.++.|+|+.   .+|+-+-.-+.|.++|++++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~   35 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN   35 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence            578999999844   48888888899999999854

It contains a characteristic DLL sequence motif.

>KOG2395|consensus

Probab=93.88  E-value=1  Score=41.64  Aligned_cols=128  Identities=14%  Similarity=0.127  Sum_probs=79.0

Q ss_pred             CCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC-------EEEEEECCCcEEEEeccccccccCCC
Q psy8430         171 PGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-------LVLSASGDKSVHIWQAVINWECLNND  242 (361)
Q Consensus       171 ~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-------~l~s~~~d~~i~lwd~~~~~~~~~~~  242 (361)
                      .+.+ +|.++..-..++--|++.|+.+..|.-+.. |.-+.+.|+.+       .-+.|-.|..|.-||.+-...-    
T Consensus       343 ~dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~----  417 (644)
T KOG2395|consen  343 ADSNLILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKN----  417 (644)
T ss_pred             cccceEeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcc----
Confidence            3444 444555566788889999999999997766 77777777533       2234667888999998743110    


Q ss_pred             CCCCCCCCCCCCCCceecccccEEEeCC----CCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE
Q psy8430         243 NDSDLDESKEPDESSITLRTPVKELLGH----SNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI  318 (361)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~  318 (361)
                                          .+....+|    ...-.|.+-. ...+++.|+.+|-|++||--..+....+.+-..+|..
T Consensus       418 --------------------kl~~~q~kqy~~k~nFsc~aTT-~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~h  476 (644)
T KOG2395|consen  418 --------------------KLAVVQSKQYSTKNNFSCFATT-ESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKH  476 (644)
T ss_pred             --------------------eeeeeeccccccccccceeeec-CCceEEEeecCCcEEeehhhhhhhhhcccccCCceee
Confidence                                11111122    1122233333 3458999999999999997332333445666667766


Q ss_pred             EEEEcC
Q psy8430         319 LCVSSY  324 (361)
Q Consensus       319 ~~~s~s  324 (361)
                      +=+|++
T Consensus       477 Vdvtad  482 (644)
T KOG2395|consen  477 VDVTAD  482 (644)
T ss_pred             EEeecc
Confidence            444444

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=93.82  E-value=0.61  Score=42.62  Aligned_cols=76  Identities=12%  Similarity=0.022  Sum_probs=54.9

Q ss_pred             CCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE---------------------------EEEE
Q psy8430         270 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI---------------------------LCVS  322 (361)
Q Consensus       270 ~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~---------------------------~~~s  322 (361)
                      ....+.++..+|++++.++...=|.|.++|+.++..++.|+|..+.-..                           +++-
T Consensus       306 ~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIy  385 (415)
T PF14655_consen  306 SKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIY  385 (415)
T ss_pred             CCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEE
Confidence            4456889999999999999888899999999998877766654332222                           3333


Q ss_pred             cCCCcccCCCeEEEEcCCCCCCCCcceeeeeecc
Q psy8430         323 SYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQD  356 (361)
Q Consensus       323 ~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~  356 (361)
                      +-     .-|.|.||  .+   +. +..|..|.-
T Consensus       386 ap-----rRg~lEvW--~~---~~-g~Rv~a~~v  408 (415)
T PF14655_consen  386 AP-----RRGILEVW--SM---RQ-GPRVAAFNV  408 (415)
T ss_pred             ec-----cCCeEEEE--ec---CC-CCEEEEEEe
Confidence            33     78999999  88   44 455666653

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=93.73  E-value=0.37  Score=28.13  Aligned_cols=31  Identities=10%  Similarity=0.165  Sum_probs=25.5

Q ss_pred             CcEEEEEEcCCC---CEEEEEeCCCcEEEeeCCC
Q psy8430         272 NVVIAADWLSDG---EQVITASWDRVANLFDVET  302 (361)
Q Consensus       272 ~~v~~~~~~~~~---~~l~s~~~d~~v~iwd~~~  302 (361)
                      +.+.++.|+|..   .+|+.+-.-|.|.|+|+++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            368899999844   4888887789999999995

It contains a characteristic DLL sequence motif.

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=93.73  E-value=1.3  Score=41.61  Aligned_cols=118  Identities=16%  Similarity=0.256  Sum_probs=72.8

Q ss_pred             ccCCCeEEEEEcCCC----CEEEEEeCCCcEEEEeCCC-----CeEEEEE--e-CCCCC--eEEEEEecCCCEEEEEECC
Q psy8430         159 GHRDGVWDVAVRPGQ----PVLGSASADRTVRLWSTQT-----GKCVLQY--S-GHSGS--VNSVRFLPNKDLVLSASGD  224 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~----~~l~s~s~d~~i~~wd~~~-----~~~~~~~--~-~h~~~--v~~v~~~~~~~~l~s~~~d  224 (361)
                      |.-..|..+.|.|-+    ..|++.-....|.+|.+..     ++.+..-  . +..-+  -..+.|+|....|+.-...
T Consensus        54 GqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~  133 (671)
T PF15390_consen   54 GQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTAR  133 (671)
T ss_pred             eccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecC
Confidence            334568999999853    3555666677899999852     2222211  1 11112  2356799998887766655


Q ss_pred             CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC-cEEEeeCC
Q psy8430         225 KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR-VANLFDVE  301 (361)
Q Consensus       225 ~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-~v~iwd~~  301 (361)
                      ..-.+++++...                         ..++.-....+.|.+.+|.+||+.|+.+-... --+|||-.
T Consensus       134 dvSV~~sV~~d~-------------------------srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~  186 (671)
T PF15390_consen  134 DVSVLPSVHCDS-------------------------SRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSA  186 (671)
T ss_pred             ceeEeeeeeeCC-------------------------ceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEecCc
Confidence            544555554321                         13333335678899999999999987765432 25789854

>PHA02713 hypothetical protein; Provisional

Probab=93.66  E-value=0.73  Score=44.38  Aligned_cols=39  Identities=13%  Similarity=0.135  Sum_probs=26.4

Q ss_pred             cEEEEEEcCCCCEEEEEeCCC--cEEEeeCCCCeEEEEeecCC
Q psy8430         273 VVIAADWLSDGEQVITASWDR--VANLFDVETGTILQSLTGHD  313 (361)
Q Consensus       273 ~v~~~~~~~~~~~l~s~~~d~--~v~iwd~~~~~~~~~~~~h~  313 (361)
                      ....+.+  +|+..++|+.++  .+-.||..+.+-...-..|+
T Consensus       505 ~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~~~~~~  545 (557)
T PHA02713        505 ALHTILH--DNTIMMLHCYESYMLQDTFNVYTYEWNHICHQHS  545 (557)
T ss_pred             cceeEEE--CCEEEEEeeecceeehhhcCcccccccchhhhcC
Confidence            3334444  788889999888  67888888876554444444

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=93.26  E-value=7.3  Score=36.95  Aligned_cols=130  Identities=12%  Similarity=0.093  Sum_probs=70.2

Q ss_pred             CEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCC--eEEEEEec--CCCEEEEEE---------CCCcEEEEeccccccccC
Q psy8430         174 PVLGSASADRTVRLWSTQTGKCVLQYSGHSGS--VNSVRFLP--NKDLVLSAS---------GDKSVHIWQAVINWECLN  240 (361)
Q Consensus       174 ~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~--v~~v~~~~--~~~~l~s~~---------~d~~i~lwd~~~~~~~~~  240 (361)
                      ..++.++.++.|..+|.++|+.+-.+......  -..+.-+|  .+..++.++         .++.+.-+|..+++..-.
T Consensus       111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~  190 (488)
T cd00216         111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWR  190 (488)
T ss_pred             CeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeE
Confidence            57778888999999999999988776532221  00111111  124444443         367888889888765433


Q ss_pred             CCCCCCCCCCCCCCCCceecccccEEEeCCCC-cE-EEEEEcCCCCEEEEEeCCC------------------cEEEeeC
Q psy8430         241 NDNDSDLDESKEPDESSITLRTPVKELLGHSN-VV-IAADWLSDGEQVITASWDR------------------VANLFDV  300 (361)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v-~~~~~~~~~~~l~s~~~d~------------------~v~iwd~  300 (361)
                      .........       .............+.+ .+ .+.++++.+..++.++.++                  .|.-+|.
T Consensus       191 ~~~~~~~~~-------~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~  263 (488)
T cd00216         191 FYTTEPDPN-------AFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDA  263 (488)
T ss_pred             eeccCCCcC-------CCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcC
Confidence            221100000       0000000000011111 11 2345666667777777665                  6889999


Q ss_pred             CCCeEEEEee
Q psy8430         301 ETGTILQSLT  310 (361)
Q Consensus       301 ~~~~~~~~~~  310 (361)
                      .+|+.+-.+.
T Consensus       264 ~tG~~~W~~~  273 (488)
T cd00216         264 DTGKVKWFYQ  273 (488)
T ss_pred             CCCCEEEEee
Confidence            9999876654

The alignment model contains an 8-bladed beta-propeller.

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=93.21  E-value=5.8  Score=35.20  Aligned_cols=133  Identities=7%  Similarity=-0.019  Sum_probs=74.7

Q ss_pred             CCEEEEEeC----------CCcEEEEeCCCC-----e--EEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecccc
Q psy8430         173 QPVLGSASA----------DRTVRLWSTQTG-----K--CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN  235 (361)
Q Consensus       173 ~~~l~s~s~----------d~~i~~wd~~~~-----~--~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~  235 (361)
                      ..+|+.|..          .|.|.++++...     +  .+... ...++|.+++-. ++ .++.+ .++.|.+|++...
T Consensus        42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~-~~~g~V~ai~~~-~~-~lv~~-~g~~l~v~~l~~~  117 (321)
T PF03178_consen   42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHST-EVKGPVTAICSF-NG-RLVVA-VGNKLYVYDLDNS  117 (321)
T ss_dssp             SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEE-EESS-EEEEEEE-TT-EEEEE-ETTEEEEEEEETT
T ss_pred             cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEE-eecCcceEhhhh-CC-EEEEe-ecCEEEEEEccCc
Confidence            357776643          288999999873     2  22222 357889998876 34 34433 3588999998755


Q ss_pred             ccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC-CeEEEEeecC--
Q psy8430         236 WECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET-GTILQSLTGH--  312 (361)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~-~~~~~~~~~h--  312 (361)
                      ..                       ......+.. ...+.++..  .+++++.|.....+.++..+. +..+..+...  
T Consensus       118 ~~-----------------------l~~~~~~~~-~~~i~sl~~--~~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~  171 (321)
T PF03178_consen  118 KT-----------------------LLKKAFYDS-PFYITSLSV--FKNYILVGDAMKSVSLLRYDEENNKLILVARDYQ  171 (321)
T ss_dssp             SS-----------------------EEEEEEE-B-SSSEEEEEE--ETTEEEEEESSSSEEEEEEETTTE-EEEEEEESS
T ss_pred             cc-----------------------chhhheecc-eEEEEEEec--cccEEEEEEcccCEEEEEEEccCCEEEEEEecCC
Confidence            20                       012222222 236666665  467999999988888774432 2222222211  


Q ss_pred             CCCCeE--------EEEEcCCCcccCCCeEEEEcCC
Q psy8430         313 DEEPHI--------LCVSSYYSKVSCDLFQRIQHLD  340 (361)
Q Consensus       313 ~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d  340 (361)
                      ...+.+        .++.++     .+|.+.++..+
T Consensus       172 ~~~v~~~~~l~d~~~~i~~D-----~~gnl~~l~~~  202 (321)
T PF03178_consen  172 PRWVTAAEFLVDEDTIIVGD-----KDGNLFVLRYN  202 (321)
T ss_dssp             -BEEEEEEEE-SSSEEEEEE-----TTSEEEEEEE-
T ss_pred             CccEEEEEEecCCcEEEEEc-----CCCeEEEEEEC
Confidence            111222        344445     88999998555

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=93.20  E-value=6.6  Score=37.61  Aligned_cols=31  Identities=23%  Similarity=0.318  Sum_probs=25.9

Q ss_pred             CCCEEEEEeCCCcEEEeeCCCCeEEEEeecC
Q psy8430         282 DGEQVITASWDRVANLFDVETGTILQSLTGH  312 (361)
Q Consensus       282 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h  312 (361)
                      .+..++.++.||.++.+|.+||+.+-...-.
T Consensus       471 ~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g  501 (527)
T TIGR03075       471 AGDLVFYGTLEGYFKAFDAKTGEELWKFKTG  501 (527)
T ss_pred             CCcEEEEECCCCeEEEEECCCCCEeEEEeCC
Confidence            4567778888999999999999999877653

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=93.14  E-value=4.1  Score=33.38  Aligned_cols=48  Identities=15%  Similarity=0.205  Sum_probs=37.1

Q ss_pred             CEEEEEeCCCcEEEEeCCC--CeEEEEEeCCCCCeEEEEEecCCCEEEEEE
Q psy8430         174 PVLGSASADRTVRLWSTQT--GKCVLQYSGHSGSVNSVRFLPNKDLVLSAS  222 (361)
Q Consensus       174 ~~l~s~s~d~~i~~wd~~~--~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~  222 (361)
                      ..|+.+...+.|.+|++..  .+.+..|. .-+.|..+.++..|++++|-=
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~-Tv~~V~~l~y~~~GDYlvTlE   78 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTFS-TVGRVLQLVYSEAGDYLVTLE   78 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEEc-chhheeEEEeccccceEEEEE
Confidence            4555546667899999873  35666776 568999999999999999863

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=93.13  E-value=2.6  Score=39.97  Aligned_cols=115  Identities=14%  Similarity=0.059  Sum_probs=64.1

Q ss_pred             EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEE-----------------ECCCcEEEEecccccc
Q psy8430         175 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA-----------------SGDKSVHIWQAVINWE  237 (361)
Q Consensus       175 ~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~-----------------~~d~~i~lwd~~~~~~  237 (361)
                      .++.++.+|.+...|..+|+.+-.....   ...++.+| +..++.+                 ..+|.+.-.|+.+++.
T Consensus       303 ~V~~g~~~G~l~ald~~tG~~~W~~~~~---~~~~~~~~-~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~  378 (488)
T cd00216         303 AIVHAPKNGFFYVLDRTTGKLISARPEV---EQPMAYDP-GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKV  378 (488)
T ss_pred             EEEEECCCceEEEEECCCCcEeeEeEee---ccccccCC-ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcE
Confidence            5778888999999999999887665421   01122333 2222211                 1346677777766643


Q ss_pred             ccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430         238 CLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG  311 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~  311 (361)
                      +-........               ....+-.. .....+..  .+..++.++.||.++.+|..+|+.+-++.-
T Consensus       379 ~W~~~~~~~~---------------~~~~~g~~-~~~~~~~~--~g~~v~~g~~dG~l~ald~~tG~~lW~~~~  434 (488)
T cd00216         379 VWEKREGTIR---------------DSWNIGFP-HWGGSLAT--AGNLVFAGAADGYFRAFDATTGKELWKFRT  434 (488)
T ss_pred             eeEeeCCccc---------------cccccCCc-ccCcceEe--cCCeEEEECCCCeEEEEECCCCceeeEEEC
Confidence            2211000000               00000000 00111222  567899999999999999999999887764

The alignment model contains an 8-bladed beta-propeller.

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=92.88  E-value=7.4  Score=35.56  Aligned_cols=115  Identities=17%  Similarity=0.166  Sum_probs=79.9

Q ss_pred             eEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC---CCcEEEEecccccccc
Q psy8430         164 VWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG---DKSVHIWQAVINWECL  239 (361)
Q Consensus       164 V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~---d~~i~lwd~~~~~~~~  239 (361)
                      -..++.++.+. ..+....++.|.+.|..+.+...... -......++++|++..+..+..   ++++.+.|..+..   
T Consensus        76 p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~-vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~---  151 (381)
T COG3391          76 PAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIP-VGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNK---  151 (381)
T ss_pred             ccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEee-eccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCe---
Confidence            44678888877 55555556899999987776665554 3337788999999977666554   6788888776552   


Q ss_pred             CCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEeeCCCCeEE
Q psy8430         240 NNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTIL  306 (361)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~  306 (361)
                                             .......-..+ ..++++|+|..++.+. .++.|.+.|..+....
T Consensus       152 -----------------------~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~  195 (381)
T COG3391         152 -----------------------VTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVV  195 (381)
T ss_pred             -----------------------EEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCccee
Confidence                                   22222222233 8899999999776665 7888999997765554

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=92.88  E-value=1.6  Score=36.41  Aligned_cols=83  Identities=16%  Similarity=0.174  Sum_probs=53.5

Q ss_pred             EecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe
Q psy8430         211 FLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS  290 (361)
Q Consensus       211 ~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~  290 (361)
                      +..++.++++.+.+|.+++||+.+.+.+....+........           . ..-......|..+.++.+|.-+++-+
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~-----------~-~~~~~~~~~i~~~~lt~~G~PiV~ls   85 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSS-----------P-VSDKSSSPNITSCSLTSNGVPIVTLS   85 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhccc-----------c-cccCCCCCcEEEEEEcCCCCEEEEEe
Confidence            44578899999999999999999876543321100000000           0 00004566888999998888777665


Q ss_pred             CCCcEEEeeCCCCeEE
Q psy8430         291 WDRVANLFDVETGTIL  306 (361)
Q Consensus       291 ~d~~v~iwd~~~~~~~  306 (361)
                       +|..+.||..-+.-+
T Consensus        86 -ng~~y~y~~~L~~W~  100 (219)
T PF07569_consen   86 -NGDSYSYSPDLGCWI  100 (219)
T ss_pred             -CCCEEEeccccceeE
Confidence             578899998765433

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=92.85  E-value=5.6  Score=34.10  Aligned_cols=61  Identities=15%  Similarity=0.299  Sum_probs=49.3

Q ss_pred             EEcCCCCEEEEEeCC-----CcEEEEeCCCC-eEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEE
Q psy8430         168 AVRPGQPVLGSASAD-----RTVRLWSTQTG-KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  230 (361)
Q Consensus       168 ~~~~~~~~l~s~s~d-----~~i~~wd~~~~-~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lw  230 (361)
                      .|+|||.+|...-.|     |.|-+||.+.+ +.+..|..|.-....+.|.+||+.++.+  +|-|...
T Consensus       120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvva--nGGIeth  186 (366)
T COG3490         120 VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVA--NGGIETH  186 (366)
T ss_pred             ccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEe--CCceecc
Confidence            499999999887554     68999999866 6688899999999999999999998876  3444443

>PHA02713 hypothetical protein; Provisional

Probab=92.84  E-value=2.8  Score=40.40  Aligned_cols=57  Identities=9%  Similarity=0.076  Sum_probs=31.0

Q ss_pred             CCCEEEEEeCC------CcEEEeeCCC-CeE--EEEeecCCCCCeE------EEEEcCCCcccCCC--eEEEEcCCCCCC
Q psy8430         282 DGEQVITASWD------RVANLFDVET-GTI--LQSLTGHDEEPHI------LCVSSYYSKVSCDL--FQRIQHLDCGTS  344 (361)
Q Consensus       282 ~~~~l~s~~~d------~~v~iwd~~~-~~~--~~~~~~h~~~v~~------~~~s~s~~~v~~dg--~i~iW~~d~~~~  344 (361)
                      +|+..+.|+.+      ..+..||..+ .+-  +..+.........      +.+.|+     .||  .+..|  |..|.
T Consensus       463 ~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~~~~iyv~Gg-----~~~~~~~e~y--d~~~~  535 (557)
T PHA02713        463 KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILHDNTIMMLHC-----YESYMLQDTF--NVYTY  535 (557)
T ss_pred             CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEECCEEEEEee-----ecceeehhhc--Ccccc
Confidence            56666777654      2467899887 432  2333322111111      555555     677  77788  76443


Q ss_pred             C
Q psy8430         345 E  345 (361)
Q Consensus       345 ~  345 (361)
                      .
T Consensus       536 ~  536 (557)
T PHA02713        536 E  536 (557)
T ss_pred             c
Confidence            3

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=92.54  E-value=1.9  Score=41.52  Aligned_cols=39  Identities=26%  Similarity=0.346  Sum_probs=29.6

Q ss_pred             CcEEEEEEcC----CCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430         272 NVVIAADWLS----DGEQVITASWDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       272 ~~v~~~~~~~----~~~~l~s~~~d~~v~iwd~~~~~~~~~~~  310 (361)
                      ..+.++++++    +..++++.+.|+.+++||+.++.++.+..
T Consensus       215 ~~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~~  257 (547)
T PF11715_consen  215 SVAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATID  257 (547)
T ss_dssp             --EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEEE
T ss_pred             CccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEec
Confidence            3455566666    77899999999999999999999977654

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=92.36  E-value=1.6  Score=40.46  Aligned_cols=105  Identities=13%  Similarity=0.112  Sum_probs=56.0

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCC
Q psy8430         162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNN  241 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~  241 (361)
                      +.-....|.+.+ .+|+-...++|.++.--.......+. ....+..|-.   |.+|...+.+ .|.+||+.++.     
T Consensus        69 G~g~~~vw~~~n-~yAv~~~~~~I~I~kn~~~~~~k~i~-~~~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~-----  137 (443)
T PF04053_consen   69 GSGLSFVWSSRN-RYAVLESSSTIKIYKNFKNEVVKSIK-LPFSVEKIFG---GNLLGVKSSD-FICFYDWETGK-----  137 (443)
T ss_dssp             EE-SEEEE-TSS-EEEEE-TTS-EEEEETTEE-TT------SS-EEEEE----SSSEEEEETT-EEEEE-TTT-------
T ss_pred             CceeEEEEecCc-cEEEEECCCeEEEEEcCccccceEEc-CCcccceEEc---CcEEEEECCC-CEEEEEhhHcc-----
Confidence            445567798844 67777778889996322222222333 2223444432   7777766554 89999987652     


Q ss_pred             CCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCC
Q psy8430         242 DNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  301 (361)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~  301 (361)
                                           .+..+..  .+|..+.|+++|.+++..+.+ .+.|++..
T Consensus       138 ---------------------~i~~i~v--~~vk~V~Ws~~g~~val~t~~-~i~il~~~  173 (443)
T PF04053_consen  138 ---------------------LIRRIDV--SAVKYVIWSDDGELVALVTKD-SIYILKYN  173 (443)
T ss_dssp             ---------------------EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEEEE-
T ss_pred             ---------------------eeeEEec--CCCcEEEEECCCCEEEEEeCC-eEEEEEec
Confidence                                 4445532  248899999999999998754 67777654

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=92.26  E-value=9.4  Score=35.27  Aligned_cols=54  Identities=9%  Similarity=0.181  Sum_probs=42.2

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCC-CCCeEEEEEecCC
Q psy8430         162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGH-SGSVNSVRFLPNK  215 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h-~~~v~~v~~~~~~  215 (361)
                      +++..+++||+|+++|.-..+|.+.+...+-.+....+... ......+.|+-++
T Consensus       217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~d  271 (410)
T PF04841_consen  217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGND  271 (410)
T ss_pred             CCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCC
Confidence            68999999999999999999999999887655666555532 4567788887543

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=92.19  E-value=4.8  Score=35.45  Aligned_cols=114  Identities=11%  Similarity=0.070  Sum_probs=69.6

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCC--C----eE-EEEEeCCCCCeEEEEEecCCCEEEEEE
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQT--G----KC-VLQYSGHSGSVNSVRFLPNKDLVLSAS  222 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~-d~~i~~wd~~~--~----~~-~~~~~~h~~~v~~v~~~~~~~~l~s~~  222 (361)
                      +..++-+.+|-..-+.|+||||++.|..+.. .+.|.-|++..  +    +. ...+....+..-.++...+|.+.+++-
T Consensus       152 g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~  231 (307)
T COG3386         152 GGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAV  231 (307)
T ss_pred             CCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecc
Confidence            3444445555666678999999987666655 47788887752  2    11 112223445666677777888776555


Q ss_pred             CCC-cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEE-cCCCCEEEEEeC
Q psy8430         223 GDK-SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADW-LSDGEQVITASW  291 (361)
Q Consensus       223 ~d~-~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~s~~~  291 (361)
                      .+| .|..|+.. +                          ..+..+......+++++| .|+.+.|+..+.
T Consensus       232 ~~g~~v~~~~pd-G--------------------------~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs~  275 (307)
T COG3386         232 WGGGRVVRFNPD-G--------------------------KLLGEIKLPVKRPTNPAFGGPDLNTLYITSA  275 (307)
T ss_pred             cCCceEEEECCC-C--------------------------cEEEEEECCCCCCccceEeCCCcCEEEEEec
Confidence            554 88899865 3                          245555555567777777 334455554443

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=92.11  E-value=1.7  Score=42.90  Aligned_cols=71  Identities=18%  Similarity=0.262  Sum_probs=41.2

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEeCC---------CCeE---EEEE--------eCCCCCeEEEEEecC---CCEE
Q psy8430         162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQ---------TGKC---VLQY--------SGHSGSVNSVRFLPN---KDLV  218 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~---------~~~~---~~~~--------~~h~~~v~~v~~~~~---~~~l  218 (361)
                      -.|..|.++|+|.+++..|..|.+.+.=.+         .|+.   .+++        ..+...|..+.|+|.   +..|
T Consensus        85 f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l  164 (717)
T PF10168_consen   85 FEVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHL  164 (717)
T ss_pred             eeEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeE
Confidence            457888899999999999887654442211         1111   0111        123345666666664   3456


Q ss_pred             EEEECCCcEEEEec
Q psy8430         219 LSASGDKSVHIWQA  232 (361)
Q Consensus       219 ~s~~~d~~i~lwd~  232 (361)
                      +.-..|+++++||+
T Consensus       165 ~vLtsdn~lR~y~~  178 (717)
T PF10168_consen  165 VVLTSDNTLRLYDI  178 (717)
T ss_pred             EEEecCCEEEEEec
Confidence            66666666666665

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=91.72  E-value=3.4  Score=36.53  Aligned_cols=134  Identities=15%  Similarity=0.134  Sum_probs=79.9

Q ss_pred             CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE----------CCCcEEEEeccccccccCCCCCCCCCCCCC
Q psy8430         183 RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS----------GDKSVHIWQAVINWECLNNDNDSDLDESKE  252 (361)
Q Consensus       183 ~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~----------~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      +.+.+.|.++++.+..+..  +..-.+..+|+++.+++++          ..-.|.+||..+-....             
T Consensus        17 ~rv~viD~d~~k~lGmi~~--g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~-------------   81 (342)
T PF06433_consen   17 SRVYVIDADSGKLLGMIDT--GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTG-------------   81 (342)
T ss_dssp             EEEEEEETTTTEEEEEEEE--ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEE-------------
T ss_pred             ceEEEEECCCCcEEEEeec--ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccc-------------
Confidence            4799999999998887763  3344567899999887653          23468999987653210             


Q ss_pred             CCCCceecccccE-EEeCCCCcEEEEEEcCCCCEEEEEe--CCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcC--CCc
Q psy8430         253 PDESSITLRTPVK-ELLGHSNVVIAADWLSDGEQVITAS--WDRVANLFDVETGTILQSLTGHDEEPHILCVSSY--YSK  327 (361)
Q Consensus       253 ~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~~--~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s--~~~  327 (361)
                            ...-|.+ ... .......++++.+|++++...  --.+|.|.|+..++.+..+... +.. .+.-++.  |..
T Consensus        82 ------EI~iP~k~R~~-~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~P-GC~-~iyP~~~~~F~~  152 (342)
T PF06433_consen   82 ------EIEIPPKPRAQ-VVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTP-GCW-LIYPSGNRGFSM  152 (342)
T ss_dssp             ------EEEETTS-B---BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGT-SEE-EEEEEETTEEEE
T ss_pred             ------eEecCCcchhe-ecccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCC-CEE-EEEecCCCceEE
Confidence                  0000110 110 011223357888999887754  4567999999999888777532 111 1222332  445


Q ss_pred             ccCCCeEEEEcCC
Q psy8430         328 VSCDLFQRIQHLD  340 (361)
Q Consensus       328 v~~dg~i~iW~~d  340 (361)
                      ++.||.+--..+|
T Consensus       153 lC~DGsl~~v~Ld  165 (342)
T PF06433_consen  153 LCGDGSLLTVTLD  165 (342)
T ss_dssp             EETTSCEEEEEET
T ss_pred             EecCCceEEEEEC
Confidence            6689988888445

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF08145 BOP1NT: BOP1NT (NUC169) domain; InterPro: IPR012953 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=91.54  E-value=0.045  Score=45.77  Aligned_cols=55  Identities=25%  Similarity=0.471  Sum_probs=48.0

Q ss_pred             hHHHHHHHHhhccccccccccCCCCCCchhhhcccc---CcccccccccCCCccccce
Q psy8430          75 LQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNK---NFNKQKVLASNPSAQKLKT  129 (361)
Q Consensus        75 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  129 (361)
                      +.+++..|+..+++.....++|++|+++++|+...+   ++++..+++..+++...++
T Consensus       201 iP~k~~sLR~Vp~Y~~~i~ErFeRCLDLYLcPR~~k~rlnidPesLlPkLP~p~dLrP  258 (260)
T PF08145_consen  201 IPQKFDSLRKVPAYENFIKERFERCLDLYLCPRVRKKRLNIDPESLLPKLPSPKDLRP  258 (260)
T ss_pred             cchhhhhhhccchHHHHHHHHHHHhhhhhcCcHhhcccCCCCHHHhCCCCcChHhcCC
Confidence            789999999999999999999999999999999876   6778888877777766554

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This N-terminal domain is found in BOP1-like WD40 proteins. Bop1 is a nucleolar protein involved in rRNA processing, thereby controlling the cell cycle []. It is required for the maturation of the 25S and 5.8S ribosomal RNAs. It may serve as an essential factor in ribosome formation that coordinates processing of the spacer regions in pre-rRNA. The Pes1-Bop1 complex has several components: BOP1, GRWD1, PES1, ORC6L, and RPL3 and is involved in ribosome biogenesis and altered chromosome segregation. The overexpression of BOP1 increases the percentage of multipolar spindles in human cells. Deregulation of the BOP1 pathway may contribute to colorectal tumourigenesis in humans []. Elevated levels of Bop1 induces Bop1/WDR12 and Bop1/Pes1 subcomplexes and the assembly and integrity of the PeBoW complex is highly sensitive to changes in Bop1 protein levels []. Nop7p-Erb1p-Ytm1p, found in yeast, is potentially the homologous complex of Pes1-Bop1-WDR12 as it is involved in the control of ribosome biogenesis and S phase entry. The integrity of the PeBoW complex is required for ribosome biogenesis and cell proliferation in mammalian cells []. In Giardia, the species specific cytoskeleton protein, beta-giardin, interacts with Bop1 []. ; GO: 0006364 rRNA processing, 0005634 nucleus

>KOG3630|consensus

Probab=91.49  E-value=1.4  Score=44.69  Aligned_cols=136  Identities=10%  Similarity=-0.059  Sum_probs=82.8

Q ss_pred             CCeEEEEEcCCCCEEEEE--eCCCcEEEEeCCCCeE-----EEEEe------CCCCCeEEEEEecCCC-EEEEEECCCcE
Q psy8430         162 DGVWDVAVRPGQPVLGSA--SADRTVRLWSTQTGKC-----VLQYS------GHSGSVNSVRFLPNKD-LVLSASGDKSV  227 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~--s~d~~i~~wd~~~~~~-----~~~~~------~h~~~v~~v~~~~~~~-~l~s~~~d~~i  227 (361)
                      -++..+...+|+...+..  +.+-.|..||+.+-..     ...+.      .....+.++.|+|.-. ..+.+..|+.|
T Consensus       101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl  180 (1405)
T KOG3630|consen  101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSL  180 (1405)
T ss_pred             ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccch
Confidence            345555566666644433  3444788899864211     11111      1234567888988533 46677889999


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEE
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ  307 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~  307 (361)
                      ++..+.....                         .... ..-...+++++|+|.|+.++.|-..|++.-|-.. ++...
T Consensus       181 ~V~~~~~~~~-------------------------~v~s-~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~-leik~  233 (1405)
T KOG3630|consen  181 RVKSTKQLAQ-------------------------NVTS-FPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS-LEIKS  233 (1405)
T ss_pred             hhhhhhhhhh-------------------------hhcc-cCcccceeeEEeccccceeeEecCCCeEEEeecc-cceee
Confidence            9886643211                         0111 1245678999999999999999999999887654 55444


Q ss_pred             EeecC----CCCCeEEEEEcC
Q psy8430         308 SLTGH----DEEPHILCVSSY  324 (361)
Q Consensus       308 ~~~~h----~~~v~~~~~s~s  324 (361)
                      .+.+.    ...|.+++|-+.
T Consensus       234 ~ip~Pp~~e~yrvl~v~Wl~t  254 (1405)
T KOG3630|consen  234 EIPEPPVEENYRVLSVTWLST  254 (1405)
T ss_pred             cccCCCcCCCcceeEEEEecc
Confidence            44432    244566666555

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=91.40  E-value=9.8  Score=33.74  Aligned_cols=98  Identities=14%  Similarity=0.042  Sum_probs=58.9

Q ss_pred             eeccceeEEeeecCccceeeeEEeec-cCC----CeEEEEEcCCCCEEEEEe--CCCcEEEEeCCCCeEEEEEeCCCCCe
Q psy8430         134 KVQTSKIVSSFKTSLLSCYKIRSFSG-HRD----GVWDVAVRPGQPVLGSAS--ADRTVRLWSTQTGKCVLQYSGHSGSV  206 (361)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~l~~-h~~----~V~~l~~~~~~~~l~s~s--~d~~i~~wd~~~~~~~~~~~~h~~~v  206 (361)
                      .+...-++..|+..+....-...+.. |+.    ....++++.||++++...  --.+|.|-|+..++.+.++....   
T Consensus        62 rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PG---  138 (342)
T PF06433_consen   62 RGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPG---  138 (342)
T ss_dssp             EEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTS---
T ss_pred             cccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCC---
Confidence            44455567777776654444334433 121    223457888888666653  34568888888888887776332   


Q ss_pred             EEEEEec-CCCEEEEEECCCcEEEEecccc
Q psy8430         207 NSVRFLP-NKDLVLSASGDKSVHIWQAVIN  235 (361)
Q Consensus       207 ~~v~~~~-~~~~l~s~~~d~~i~lwd~~~~  235 (361)
                      +...| | ..+.|.+.|.||++.-..+...
T Consensus       139 C~~iy-P~~~~~F~~lC~DGsl~~v~Ld~~  167 (342)
T PF06433_consen  139 CWLIY-PSGNRGFSMLCGDGSLLTVTLDAD  167 (342)
T ss_dssp             EEEEE-EEETTEEEEEETTSCEEEEEETST
T ss_pred             EEEEE-ecCCCceEEEecCCceEEEEECCC
Confidence            12222 3 2356889999999988888733

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=91.39  E-value=1.9  Score=35.94  Aligned_cols=64  Identities=16%  Similarity=0.224  Sum_probs=48.6

Q ss_pred             EcCCCCEEEEEeCCCcEEEEeCCCCeEEEEE-------e-------CCCCCeEEEEEecCCCEEEEEECCCcEEEEecc
Q psy8430         169 VRPGQPVLGSASADRTVRLWSTQTGKCVLQY-------S-------GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV  233 (361)
Q Consensus       169 ~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~-------~-------~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~  233 (361)
                      +..++.+|++-..+|.+++||+.+++.+..-       .       .....|..+.+..+|.-+++-+ +|....|+..
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~   95 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPD   95 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEeccc
Confidence            4456889999999999999999988754332       1       3557788888888888777655 5778888764

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=91.33  E-value=9.2  Score=36.28  Aligned_cols=153  Identities=17%  Similarity=0.205  Sum_probs=79.1

Q ss_pred             CCeEEEEEcCCCCEEEEEe--CCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC----CCEEEEEECCCcEEEEecccc
Q psy8430         162 DGVWDVAVRPGQPVLGSAS--ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN----KDLVLSASGDKSVHIWQAVIN  235 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s--~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~----~~~l~s~~~d~~i~lwd~~~~  235 (361)
                      -+|..++|......+++.-  ..|.+++=   ..+.+..|.    .|..+.|.|-    ...+++....+.|.+|.+.-.
T Consensus        20 HPvhGlaWTDGkqVvLT~L~l~~gE~kfG---ds~viGqFE----hV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s   92 (671)
T PF15390_consen   20 HPVHGLAWTDGKQVVLTDLQLHNGEPKFG---DSKVIGQFE----HVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPS   92 (671)
T ss_pred             ccccceEecCCCEEEEEeeeeeCCccccC---CccEeeccc----eeeeeeecCcccCCCCceEEEeccceEEEEEeccC
Confidence            5678888976554555542  23333321   123344444    5889999983    446778889999999987522


Q ss_pred             ccccCCCCCCCCCCCCCCCCCceecccccEEEeCC-CCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC--CeEEEEeecC
Q psy8430         236 WECLNNDNDSDLDESKEPDESSITLRTPVKELLGH-SNVVIAADWLSDGEQVITASWDRVANLFDVET--GTILQSLTGH  312 (361)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~--~~~~~~~~~h  312 (361)
                      .....                .+ .......+... .---..+-|||....|+.-.....-.+++++.  .+....+. .
T Consensus        93 ~~e~~----------------K~-l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~-~  154 (671)
T PF15390_consen   93 TTERN----------------KL-LMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIK-T  154 (671)
T ss_pred             ccccc----------------cc-eeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEecc-C
Confidence            10000                00 00001111100 00122456999888776655544444555542  23333342 4


Q ss_pred             CCCCeEEEEEcCCCc----ccCCCeEEEEcCCC
Q psy8430         313 DEEPHILCVSSYYSK----VSCDLFQRIQHLDC  341 (361)
Q Consensus       313 ~~~v~~~~~s~s~~~----v~~dg~i~iW~~d~  341 (361)
                      .+-|.|-+||-++..    |+..=.-+||  |-
T Consensus       155 ~G~IhCACWT~DG~RLVVAvGSsLHSyiW--d~  185 (671)
T PF15390_consen  155 SGLIHCACWTKDGQRLVVAVGSSLHSYIW--DS  185 (671)
T ss_pred             CceEEEEEecCcCCEEEEEeCCeEEEEEe--cC
Confidence            566777666665331    2233345688  54

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=91.09  E-value=9.3  Score=32.87  Aligned_cols=117  Identities=15%  Similarity=0.103  Sum_probs=65.2

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEE--------------EeCCCCCeEEEE--EecCCCEEEEEECCC
Q psy8430         162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ--------------YSGHSGSVNSVR--FLPNKDLVLSASGDK  225 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~--------------~~~h~~~v~~v~--~~~~~~~l~s~~~d~  225 (361)
                      ..|..+..-++-+.|+.-+ |+.+.++++..-.....              -......+...+  -.+.+...+.+...+
T Consensus        36 ~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk  114 (275)
T PF00780_consen   36 SSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKK  114 (275)
T ss_pred             ceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccccccccccccccCCeeEEeeccccccceEEEEEECC
Confidence            3499999999877666654 59999999865432221              011223444444  112344455555566


Q ss_pred             cEEEEeccccccccCCCCCCCCCCCCCCCCCceecc-cccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCe
Q psy8430         226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLR-TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT  304 (361)
Q Consensus       226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~  304 (361)
                      +|.+|.+.....                      .. ...+.+. -...+.+++|.  ++.++.|..++ ..+.|+.++.
T Consensus       115 ~i~i~~~~~~~~----------------------~f~~~~ke~~-lp~~~~~i~~~--~~~i~v~~~~~-f~~idl~~~~  168 (275)
T PF00780_consen  115 KILIYEWNDPRN----------------------SFSKLLKEIS-LPDPPSSIAFL--GNKICVGTSKG-FYLIDLNTGS  168 (275)
T ss_pred             EEEEEEEECCcc----------------------cccceeEEEE-cCCCcEEEEEe--CCEEEEEeCCc-eEEEecCCCC
Confidence            899988754210                      00 1233333 23567777775  55566665433 5666766554


Q ss_pred             E
Q psy8430         305 I  305 (361)
Q Consensus       305 ~  305 (361)
                      .
T Consensus       169 ~  169 (275)
T PF00780_consen  169 P  169 (275)
T ss_pred             c
Confidence            3

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=90.62  E-value=10  Score=32.44  Aligned_cols=115  Identities=17%  Similarity=0.160  Sum_probs=70.1

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeE-EEEEe--CCCCCeEEEEEecCCCEEEEEE---CCCcEEEEecccc
Q psy8430         163 GVWDVAVRPGQPVLGSASADRTVRLWS-TQTGKC-VLQYS--GHSGSVNSVRFLPNKDLVLSAS---GDKSVHIWQAVIN  235 (361)
Q Consensus       163 ~V~~l~~~~~~~~l~s~s~d~~i~~wd-~~~~~~-~~~~~--~h~~~v~~v~~~~~~~~l~s~~---~d~~i~lwd~~~~  235 (361)
                      .+..-.|++++...+....+...+++. ...+.. .....  .-...|..++++|+|..++...   .++.|.+=-+...
T Consensus        67 ~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~  146 (253)
T PF10647_consen   67 SLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRD  146 (253)
T ss_pred             ccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeC
Confidence            677788999988777777677777774 233321 11122  1122899999999999877655   3466666654322


Q ss_pred             ccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc
Q psy8430         236 WECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRV  294 (361)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~  294 (361)
                      ..-                 .......+..........+.++.|.+++.+++.+...+.
T Consensus       147 ~~g-----------------~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~~~  188 (253)
T PF10647_consen  147 GDG-----------------VPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGRSAGG  188 (253)
T ss_pred             CCC-----------------CcceeccceEecccccCcceeeeecCCCEEEEEeCCCCC
Confidence            110                 011111233333344568999999999988877665544

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>KOG2377|consensus

Probab=90.46  E-value=8.5  Score=35.29  Aligned_cols=72  Identities=7%  Similarity=0.162  Sum_probs=50.5

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEE----EEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV----LQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~----~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~  232 (361)
                      ...|+|.++.|++|...||.--.|++|-+++....+..    .+.+.....|....|..+ .-++-.+ +.-+.+|.+
T Consensus        64 ~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~-~~G~e~y~v  139 (657)
T KOG2377|consen   64 DDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFIT-DQGIEFYQV  139 (657)
T ss_pred             cCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEe-cCCeEEEEE
Confidence            56789999999999999999999999999998543322    223334556888899865 3344333 333666643

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=90.45  E-value=6.8  Score=33.43  Aligned_cols=111  Identities=19%  Similarity=0.185  Sum_probs=66.4

Q ss_pred             CeEEEEEcCCCCEEEEEe---CCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe-ccccccc
Q psy8430         163 GVWDVAVRPGQPVLGSAS---ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ-AVINWEC  238 (361)
Q Consensus       163 ~V~~l~~~~~~~~l~s~s---~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd-~~~~~~~  238 (361)
                      .+.+.++++++..++...   ....+.++..  +....... ....+..-.|++++...+....+...+++. ...+.. 
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~--~~~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~-  100 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPA--GGPVRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTG-  100 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcC--CCcceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcc-
Confidence            688999999999776655   2234555543  32222221 334778889999977766666666666663 111100 


Q ss_pred             cCCCCCCCCCCCCCCCCCceecccccE-EEeCCCCcEEEEEEcCCCCEEEEEe---CCCcEEEeeC
Q psy8430         239 LNNDNDSDLDESKEPDESSITLRTPVK-ELLGHSNVVIAADWLSDGEQVITAS---WDRVANLFDV  300 (361)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~~---~d~~v~iwd~  300 (361)
                                             .+.. ....-...|.++.+||||..++...   .++.|.+--+
T Consensus       101 -----------------------~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V  143 (253)
T PF10647_consen  101 -----------------------EPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGV  143 (253)
T ss_pred             -----------------------eeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEE
Confidence                                   0111 1111112899999999999887765   3466666543

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>KOG2280|consensus

Probab=90.33  E-value=8.5  Score=37.54  Aligned_cols=178  Identities=12%  Similarity=0.023  Sum_probs=92.5

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEE----eCCCCCeEEEEEecCCCEEEEEECCC
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY----SGHSGSVNSVRFLPNKDLVLSASGDK  225 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~----~~h~~~v~~v~~~~~~~~l~s~~~d~  225 (361)
                      .|+++.++....+.+..+.|+.+.. |++...||++++|++.. ..+..+    ..-...|..+.|..+|-.+++  .+|
T Consensus        72 sG~lL~~~~w~~~~lI~mgWs~~ee-LI~v~k~g~v~Vy~~~g-e~ie~~svg~e~~~~~I~ec~~f~~GVavlt--~~g  147 (829)
T KOG2280|consen   72 SGQLLGRILWKHGELIGMGWSDDEE-LICVQKDGTVHVYGLLG-EFIESNSVGFESQMSDIVECRFFHNGVAVLT--VSG  147 (829)
T ss_pred             cccchHHHHhcCCCeeeecccCCce-EEEEeccceEEEeecch-hhhcccccccccccCceeEEEEecCceEEEe--cCC
Confidence            4555556555566888999998874 55668999999999853 222221    112233444444444433333  344


Q ss_pred             cEE-EEeccccccccCCC---CCCCCCCCCCCCCC-----ceecc--------------cccEEEeCCCCcEEEEEEcCC
Q psy8430         226 SVH-IWQAVINWECLNND---NDSDLDESKEPDES-----SITLR--------------TPVKELLGHSNVVIAADWLSD  282 (361)
Q Consensus       226 ~i~-lwd~~~~~~~~~~~---~~~~~~~~~~~~~~-----~~~~~--------------~~~~~~~~~~~~v~~~~~~~~  282 (361)
                      .+. +.+....+.-....   ....-..+......     .....              .....+....+.+..+.+||+
T Consensus       148 ~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~~~~~q~~~~~~q~~~~~~~~~~~~ki~VS~n  227 (829)
T KOG2280|consen  148 QVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVGLHICQVEESRVQLHALSWPNSSVVKISVSPN  227 (829)
T ss_pred             cEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhhhcccceecccccccccCCCCceEEEEEEcCC
Confidence            433 33333221111111   00000111111100     00000              001111112356778899999


Q ss_pred             CCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCe-EEEEEcCCCcccCCCeEEEE
Q psy8430         283 GEQVITASWDRVANLFDVETGTILQSLTGHDEEPH-ILCVSSYYSKVSCDLFQRIQ  337 (361)
Q Consensus       283 ~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~-~~~~s~s~~~v~~dg~i~iW  337 (361)
                      .++|+-=..+|.|.+-++...++...+........ .+.+.|      .|..+..|
T Consensus       228 ~~~laLyt~~G~i~~vs~D~~~~lce~~~~~~~~p~qm~Wcg------ndaVvl~~  277 (829)
T KOG2280|consen  228 RRFLALYTETGKIWVVSIDLSQILCEFNCTDHDPPKQMAWCG------NDAVVLSW  277 (829)
T ss_pred             cceEEEEecCCcEEEEecchhhhhhccCCCCCCchHhceeec------CCceEEEE
Confidence            99999999999999998888777776663322222 245554      34555555

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=89.99  E-value=15  Score=33.40  Aligned_cols=69  Identities=6%  Similarity=0.026  Sum_probs=41.3

Q ss_pred             CCeEEEEEcCCCCEEEEEe-----------CCC-cEEEEeCCC--Ce--EEEEEeCCCCCeEEEEEecCCCEEEEEECCC
Q psy8430         162 DGVWDVAVRPGQPVLGSAS-----------ADR-TVRLWSTQT--GK--CVLQYSGHSGSVNSVRFLPNKDLVLSASGDK  225 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s-----------~d~-~i~~wd~~~--~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~  225 (361)
                      .....++|+++|+++++-.           ..+ .|.+++-..  |+  ....+...-.....+++.+++ ++++ +...
T Consensus        14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV~-~~~~   91 (367)
T TIGR02604        14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYVA-TPPD   91 (367)
T ss_pred             CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEEe-CCCe
Confidence            4466899999999877753           223 677776533  32  233444344567889999888 5544 4444


Q ss_pred             cEEEEec
Q psy8430         226 SVHIWQA  232 (361)
Q Consensus       226 ~i~lwd~  232 (361)
                      ..++.|.
T Consensus        92 i~~~~d~   98 (367)
T TIGR02604        92 ILFLRDK   98 (367)
T ss_pred             EEEEeCC
Confidence            3334444

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=89.84  E-value=7.2  Score=32.03  Aligned_cols=49  Identities=12%  Similarity=0.134  Sum_probs=34.4

Q ss_pred             CEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy8430         216 DLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA  289 (361)
Q Consensus       216 ~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~  289 (361)
                      +.|+.+...+.|.+|++....                        .++...+.. -+.|..+.++..|+|++|-
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~------------------------~~~~~~F~T-v~~V~~l~y~~~GDYlvTl   77 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEE------------------------CPLLCTFST-VGRVLQLVYSEAGDYLVTL   77 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCC------------------------CceeEEEcc-hhheeEEEeccccceEEEE
Confidence            455444667789999987321                        124444543 3789999999999999985

>KOG4441|consensus

Probab=89.70  E-value=20  Score=34.78  Aligned_cols=143  Identities=16%  Similarity=0.118  Sum_probs=72.4

Q ss_pred             CCCEEEEEeCCCc-----EEEEeCCCCeEEEEEeCCCCCeEEEEEe-cCCCEEEEEECCC------cEEEEecccccccc
Q psy8430         172 GQPVLGSASADRT-----VRLWSTQTGKCVLQYSGHSGSVNSVRFL-PNKDLVLSASGDK------SVHIWQAVINWECL  239 (361)
Q Consensus       172 ~~~~l~s~s~d~~-----i~~wd~~~~~~~~~~~~h~~~v~~v~~~-~~~~~l~s~~~d~------~i~lwd~~~~~~~~  239 (361)
                      +|.+.+.||.||.     |-.||..+.+--..-. ........... -+|.+.+.|+.|+      ++..||..++    
T Consensus       380 ~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~-m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~----  454 (571)
T KOG4441|consen  380 DGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAP-MLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETN----  454 (571)
T ss_pred             CCEEEEEeccccccccccEEEecCCCCcccccCC-CCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCC----
Confidence            4668888888864     5567765543211111 11112222211 2677788887665      4567776654    


Q ss_pred             CCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc-----EEEeeCCCCeEEE--EeecC
Q psy8430         240 NNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRV-----ANLFDVETGTILQ--SLTGH  312 (361)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~-----v~iwd~~~~~~~~--~~~~h  312 (361)
                                       .|....+...-..+.+   ...+  ++...+.|+.|+.     |..||..+.+...  .+...
T Consensus       455 -----------------~W~~~~~M~~~R~~~g---~a~~--~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~  512 (571)
T KOG4441|consen  455 -----------------TWTLIAPMNTRRSGFG---VAVL--NGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSP  512 (571)
T ss_pred             -----------------ceeecCCcccccccce---EEEE--CCEEEEECCccCCCccceEEEEcCCCCceeEcccCccc
Confidence                             2333333333322222   2233  6777788887763     7778888655432  22222


Q ss_pred             CCCCeE------EEEEcCCCcccCCCeEEEEcCCCCC
Q psy8430         313 DEEPHI------LCVSSYYSKVSCDLFQRIQHLDCGT  343 (361)
Q Consensus       313 ~~~v~~------~~~s~s~~~v~~dg~i~iW~~d~~~  343 (361)
                      ...+..      +.+.|++.....=++|..|  |..+
T Consensus       513 rs~~g~~~~~~~ly~vGG~~~~~~l~~ve~y--dp~~  547 (571)
T KOG4441|consen  513 RSAVGVVVLGGKLYAVGGFDGNNNLNTVECY--DPET  547 (571)
T ss_pred             cccccEEEECCEEEEEecccCccccceeEEc--CCCC
Confidence            222111      5556663333344567777  5433

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=89.58  E-value=7.4  Score=35.65  Aligned_cols=118  Identities=14%  Similarity=0.173  Sum_probs=62.9

Q ss_pred             CeEEEEEcCCCCEEEEEeC--------------------CCcEEEEeCCCCeEEEEEeCC--CCCeEEEEEecCC--CE-
Q psy8430         163 GVWDVAVRPGQPVLGSASA--------------------DRTVRLWSTQTGKCVLQYSGH--SGSVNSVRFLPNK--DL-  217 (361)
Q Consensus       163 ~V~~l~~~~~~~~l~s~s~--------------------d~~i~~wd~~~~~~~~~~~~h--~~~v~~v~~~~~~--~~-  217 (361)
                      --+.+-|.|..+.++|+.-                    -.++.+||+.+.+.++++.--  ...+.-|+|..+.  .. 
T Consensus       182 ~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~g  261 (461)
T PF05694_consen  182 FGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYG  261 (461)
T ss_dssp             ----EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EE
T ss_pred             CCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccce
Confidence            3456678888888887642                    357999999999999988732  2356778886543  33 


Q ss_pred             EEEEECCCcEEEEec-cccccccCCCCCCCCCCCCCCCCCceecccccEEE-----eC------------CCCcEEEEEE
Q psy8430         218 VLSASGDKSVHIWQA-VINWECLNNDNDSDLDESKEPDESSITLRTPVKEL-----LG------------HSNVVIAADW  279 (361)
Q Consensus       218 l~s~~~d~~i~lwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~------------~~~~v~~~~~  279 (361)
                      |+.+....+|..|-- ..+                     .+... .+..+     .+            -..-++.+.+
T Consensus       262 Fvg~aLss~i~~~~k~~~g---------------------~W~a~-kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~i  319 (461)
T PF05694_consen  262 FVGCALSSSIWRFYKDDDG---------------------EWAAE-KVIDIPAKKVEGWILPEMLKPFGAVPPLITDILI  319 (461)
T ss_dssp             EEEEE--EEEEEEEE-ETT---------------------EEEEE-EEEEE--EE--SS---GGGGGG-EE------EEE
T ss_pred             EEEEeccceEEEEEEcCCC---------------------Ceeee-EEEECCCcccCcccccccccccccCCCceEeEEE
Confidence            555555666655532 211                     11111 11111     01            1245788999


Q ss_pred             cCCCCEEEEEeC-CCcEEEeeCCC
Q psy8430         280 LSDGEQVITASW-DRVANLFDVET  302 (361)
Q Consensus       280 ~~~~~~l~s~~~-d~~v~iwd~~~  302 (361)
                      |.|.++|+..+. +|.|+.||+..
T Consensus       320 SlDDrfLYvs~W~~GdvrqYDISD  343 (461)
T PF05694_consen  320 SLDDRFLYVSNWLHGDVRQYDISD  343 (461)
T ss_dssp             -TTS-EEEEEETTTTEEEEEE-SS
T ss_pred             ccCCCEEEEEcccCCcEEEEecCC
Confidence            999999988775 78999999975

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=89.33  E-value=8  Score=37.94  Aligned_cols=113  Identities=19%  Similarity=0.177  Sum_probs=72.2

Q ss_pred             eEEEEEcC--CCCEEEEEeCCCcEEEEeCCC-------C-------------eEEEEEeCCCCCeEEEEEe--cCCCEEE
Q psy8430         164 VWDVAVRP--GQPVLGSASADRTVRLWSTQT-------G-------------KCVLQYSGHSGSVNSVRFL--PNKDLVL  219 (361)
Q Consensus       164 V~~l~~~~--~~~~l~s~s~d~~i~~wd~~~-------~-------------~~~~~~~~h~~~v~~v~~~--~~~~~l~  219 (361)
                      |+-+....  +...|+.|..||.|.+|.+++       .             ++-..+. ...+++.++++  ...+++|
T Consensus       103 IN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIA  181 (717)
T PF08728_consen  103 INFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIA  181 (717)
T ss_pred             eeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEE
Confidence            55555443  455899999999999997631       0             0112222 45689999998  6777788


Q ss_pred             EEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCC---C---EEEEEeCCC
Q psy8430         220 SASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG---E---QVITASWDR  293 (361)
Q Consensus       220 s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~---~l~s~~~d~  293 (361)
                      .++....|.||-......                       +.....-..|...|.+++|-++.   .   ++++++-.|
T Consensus       182 VSsNs~~VTVFaf~l~~~-----------------------r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G  238 (717)
T PF08728_consen  182 VSSNSQEVTVFAFALVDE-----------------------RFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISG  238 (717)
T ss_pred             EecCCceEEEEEEecccc-----------------------ccccccccccccCCCeeEeecCCCCCccceEEEEEeccC
Confidence            777777888875432100                       00010011255677788886633   2   788889999


Q ss_pred             cEEEeeC
Q psy8430         294 VANLFDV  300 (361)
Q Consensus       294 ~v~iwd~  300 (361)
                      .+.+|++
T Consensus       239 ~v~~~~I  245 (717)
T PF08728_consen  239 EVWTFKI  245 (717)
T ss_pred             cEEEEEE
Confidence            9998887

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>KOG3630|consensus

Probab=88.73  E-value=0.81  Score=46.16  Aligned_cols=71  Identities=14%  Similarity=0.096  Sum_probs=53.5

Q ss_pred             CCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeE-EEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430         161 RDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKC-VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       161 ~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~-~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~  232 (361)
                      ...+.++.|+|.-. ..+.+..|+.|++..+..... +..+. -...++|++|+|.|..++.|-..|++.-|..
T Consensus       155 ~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p-~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P  227 (1405)
T KOG3630|consen  155 PVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFP-VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEP  227 (1405)
T ss_pred             ccccccccccCCccchhhhhccccchhhhhhhhhhhhhcccC-cccceeeEEeccccceeeEecCCCeEEEeec
Confidence            34566778999544 567778899999887754322 22223 5678899999999999999999999998864

>KOG4460|consensus

Probab=88.56  E-value=4.8  Score=37.47  Aligned_cols=28  Identities=11%  Similarity=0.050  Sum_probs=21.8

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy8430         162 DGVWDVAVRPGQPVLGSASADRTVRLWS  189 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd  189 (361)
                      -.|..+..++.|..++-+|.+|.+.++=
T Consensus       104 feV~~vl~s~~GS~VaL~G~~Gi~vMeL  131 (741)
T KOG4460|consen  104 FEVYQVLLSPTGSHVALIGIKGLMVMEL  131 (741)
T ss_pred             EEEEEEEecCCCceEEEecCCeeEEEEc
Confidence            3477778899999999999988776543

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=88.02  E-value=3.4  Score=23.56  Aligned_cols=32  Identities=13%  Similarity=0.308  Sum_probs=25.3

Q ss_pred             CCCCEEEEEe-CCCcEEEeeCCCCeEEEEeecC
Q psy8430         281 SDGEQVITAS-WDRVANLFDVETGTILQSLTGH  312 (361)
Q Consensus       281 ~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~h  312 (361)
                      |++++++++. .+++|.++|..+++.+..+...
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg   33 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVG   33 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECC
Confidence            5777777655 4788999999999988888763

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=87.88  E-value=14  Score=33.52  Aligned_cols=66  Identities=23%  Similarity=0.291  Sum_probs=37.8

Q ss_pred             EEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-----e--EEE-EEeC----CCCCeEEEEEecCCCEEEEEE
Q psy8430         155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-----K--CVL-QYSG----HSGSVNSVRFLPNKDLVLSAS  222 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~-----~--~~~-~~~~----h~~~v~~v~~~~~~~~l~s~~  222 (361)
                      ..+.........+++.++| ++++ +.....++.|....     +  .+. .+..    +......++|.|+|.+.++.+
T Consensus        65 ~vfa~~l~~p~Gi~~~~~G-lyV~-~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G  142 (367)
T TIGR02604        65 NVFAEELSMVTGLAVAVGG-VYVA-TPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG  142 (367)
T ss_pred             EEeecCCCCccceeEecCC-EEEe-CCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence            3444445567889999988 5554 44443334454321     1  111 1222    234578899999998776655

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=87.77  E-value=8.9  Score=30.53  Aligned_cols=31  Identities=16%  Similarity=0.290  Sum_probs=25.4

Q ss_pred             CcEEEEEEcCCC------CEEEEEeCCCcEEEeeCCC
Q psy8430         272 NVVIAADWLSDG------EQVITASWDRVANLFDVET  302 (361)
Q Consensus       272 ~~v~~~~~~~~~------~~l~s~~~d~~v~iwd~~~  302 (361)
                      ..+.+++|||.|      -+|++.+.++.|.||....
T Consensus        86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~  122 (173)
T PF12657_consen   86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG  122 (173)
T ss_pred             ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence            478999999954      3688889999999998664

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=87.52  E-value=23  Score=35.57  Aligned_cols=69  Identities=13%  Similarity=0.119  Sum_probs=47.7

Q ss_pred             CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCC--------eEEEEEec----------------CCCEEEEEECCCcEE
Q psy8430         173 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS--------VNSVRFLP----------------NKDLVLSASGDKSVH  228 (361)
Q Consensus       173 ~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~--------v~~v~~~~----------------~~~~l~s~~~d~~i~  228 (361)
                      +..++.++.++.|.-.|..+|+.+-.+......        ...+.+..                .+..++.++.|+.+.
T Consensus       194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li  273 (764)
T TIGR03074       194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI  273 (764)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence            557778888899999999999887776532211        11222221                344788888899999


Q ss_pred             EEeccccccccCC
Q psy8430         229 IWQAVINWECLNN  241 (361)
Q Consensus       229 lwd~~~~~~~~~~  241 (361)
                      -.|..+++.+..+
T Consensus       274 ALDA~TGk~~W~f  286 (764)
T TIGR03074       274 ALDADTGKLCEDF  286 (764)
T ss_pred             EEECCCCCEEEEe
Confidence            9999988776543

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=87.26  E-value=35  Score=34.37  Aligned_cols=67  Identities=12%  Similarity=0.126  Sum_probs=44.3

Q ss_pred             CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeE-------------EEEEec--CCCEEEEEEC----------CCcE
Q psy8430         173 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN-------------SVRFLP--NKDLVLSASG----------DKSV  227 (361)
Q Consensus       173 ~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~-------------~v~~~~--~~~~l~s~~~----------d~~i  227 (361)
                      +..++.++.|+.+.-.|.++|+.+..+. ..+.|.             .+.-.|  .+..++.++.          +|.|
T Consensus       260 ~~rV~~~T~Dg~LiALDA~TGk~~W~fg-~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I  338 (764)
T TIGR03074       260 ARRIILPTSDARLIALDADTGKLCEDFG-NNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVI  338 (764)
T ss_pred             CCEEEEecCCCeEEEEECCCCCEEEEec-CCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEE
Confidence            4478888899999999999999887664 222221             011112  2345555542          6889


Q ss_pred             EEEeccccccccC
Q psy8430         228 HIWQAVINWECLN  240 (361)
Q Consensus       228 ~lwd~~~~~~~~~  240 (361)
                      +-+|+.+++..-.
T Consensus       339 ~A~Da~TGkl~W~  351 (764)
T TIGR03074       339 RAFDVNTGALVWA  351 (764)
T ss_pred             EEEECCCCcEeeE
Confidence            9999999977654

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=87.26  E-value=20  Score=31.96  Aligned_cols=50  Identities=14%  Similarity=0.233  Sum_probs=34.2

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE---EEEE----eCCCCCeEEEEEecC
Q psy8430         163 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC---VLQY----SGHSGSVNSVRFLPN  214 (361)
Q Consensus       163 ~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~---~~~~----~~h~~~v~~v~~~~~  214 (361)
                      .-+.|+|.|+|.+|++ -..|.|++++ ..+..   +..+    .........++++|+
T Consensus         3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~   59 (331)
T PF07995_consen    3 NPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPD   59 (331)
T ss_dssp             SEEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TT
T ss_pred             CceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccc
Confidence            3578999999977665 5599999999 44543   2222    123467899999994

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=86.83  E-value=19  Score=30.80  Aligned_cols=130  Identities=10%  Similarity=0.028  Sum_probs=76.7

Q ss_pred             eeeEEeecc-CCCeEEEEEcCCCCEEEEEeCCC--cEEEEeCCCCeEEEEEeCC-CCCeEEEEEecCCCEEEEEECCCcE
Q psy8430         152 YKIRSFSGH-RDGVWDVAVRPGQPVLGSASADR--TVRLWSTQTGKCVLQYSGH-SGSVNSVRFLPNKDLVLSASGDKSV  227 (361)
Q Consensus       152 ~~~~~l~~h-~~~V~~l~~~~~~~~l~s~s~d~--~i~~wd~~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~~~d~~i  227 (361)
                      +.+.++... ..-...+.|..+|.++-+.|.-|  .|+.+|+.+|+......-. .----.++.. +++...-.-.++..
T Consensus        34 ~vv~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~-~d~l~qLTWk~~~~  112 (264)
T PF05096_consen   34 EVVETYPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL-GDKLYQLTWKEGTG  112 (264)
T ss_dssp             EEEEEEE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE-TTEEEEEESSSSEE
T ss_pred             EEEEECCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEE-CCEEEEEEecCCeE
Confidence            344444432 33345578878888888888877  7999999999876554421 1112233332 23333344568889


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEE
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ  307 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~  307 (361)
                      .+||..+-+                          .+..+. ..+.=+.++.  +|+.|+.......++++|..+.+...
T Consensus       113 f~yd~~tl~--------------------------~~~~~~-y~~EGWGLt~--dg~~Li~SDGS~~L~~~dP~~f~~~~  163 (264)
T PF05096_consen  113 FVYDPNTLK--------------------------KIGTFP-YPGEGWGLTS--DGKRLIMSDGSSRLYFLDPETFKEVR  163 (264)
T ss_dssp             EEEETTTTE--------------------------EEEEEE--SSS--EEEE--CSSCEEEE-SSSEEEEE-TTT-SEEE
T ss_pred             EEEccccce--------------------------EEEEEe-cCCcceEEEc--CCCEEEEECCccceEEECCcccceEE
Confidence            999986542                          333333 2345566664  78888888888899999999887777


Q ss_pred             Eeec
Q psy8430         308 SLTG  311 (361)
Q Consensus       308 ~~~~  311 (361)
                      ++..
T Consensus       164 ~i~V  167 (264)
T PF05096_consen  164 TIQV  167 (264)
T ss_dssp             EEE-
T ss_pred             EEEE
Confidence            6654

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PHA03098 kelch-like protein; Provisional

Probab=86.57  E-value=31  Score=33.09  Aligned_cols=62  Identities=15%  Similarity=0.058  Sum_probs=30.7

Q ss_pred             CCCEEEEEeCC-----CcEEEEeCCCCeEEE--EEeCCCCCeEEEEEecCCCEEEEEECC------CcEEEEecccc
Q psy8430         172 GQPVLGSASAD-----RTVRLWSTQTGKCVL--QYSGHSGSVNSVRFLPNKDLVLSASGD------KSVHIWQAVIN  235 (361)
Q Consensus       172 ~~~~l~s~s~d-----~~i~~wd~~~~~~~~--~~~~h~~~v~~v~~~~~~~~l~s~~~d------~~i~lwd~~~~  235 (361)
                      ++.+++.||.+     ..+..||..+.+-..  .+. +...-.+++ .-++.+.+.|+.+      ..+..||+.+.
T Consensus       342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp-~~r~~~~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~  416 (534)
T PHA03098        342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLI-FPRYNPCVV-NVNNLIYVIGGISKNDELLKTVECFSLNTN  416 (534)
T ss_pred             CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcC-cCCccceEE-EECCEEEEECCcCCCCcccceEEEEeCCCC
Confidence            46677777765     246678876553211  111 111111122 2256666666632      34677777543

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=86.55  E-value=15  Score=31.68  Aligned_cols=142  Identities=15%  Similarity=0.109  Sum_probs=76.3

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeC------C-C-----------cEEEEeCCCCeEEEE--Ee--CCCCCe
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASA------D-R-----------TVRLWSTQTGKCVLQ--YS--GHSGSV  206 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~------d-~-----------~i~~wd~~~~~~~~~--~~--~h~~~v  206 (361)
                      ...+.+..+..|.-.-..+.|.+||+.++.+..      | |           ++.+-|..+|..+..  +.  -+.-+|
T Consensus       149 ~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSi  228 (366)
T COG3490         149 EGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSI  228 (366)
T ss_pred             cccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcce
Confidence            455677777888877888999999998877643      1 1           222333334433222  11  244567


Q ss_pred             EEEEEecCCCEEEEEECCCcEE-----EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC
Q psy8430         207 NSVRFLPNKDLVLSASGDKSVH-----IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS  281 (361)
Q Consensus       207 ~~v~~~~~~~~l~s~~~d~~i~-----lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  281 (361)
                      ..++..++|+.++.+-..|.-.     +=-...+..+                   ....-+......-.+.|-+++.+.
T Consensus       229 RHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l-------------------~~~~~pee~~~~~anYigsiA~n~  289 (366)
T COG3490         229 RHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPL-------------------EFLDLPEEQTAAFANYIGSIAANR  289 (366)
T ss_pred             eeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcC-------------------cccCCCHHHHHHHHhhhhheeecc
Confidence            7777777777666554433110     0000000000                   000001111112345677788876


Q ss_pred             CCCEEEEEe-CCCcEEEeeCCCCeEEEEe
Q psy8430         282 DGEQVITAS-WDRVANLFDVETGTILQSL  309 (361)
Q Consensus       282 ~~~~l~s~~-~d~~v~iwd~~~~~~~~~~  309 (361)
                      +..+++..+ ..+...+||..+|..+..-
T Consensus       290 ~~glV~lTSP~GN~~vi~da~tG~vv~~a  318 (366)
T COG3490         290 RDGLVALTSPRGNRAVIWDAATGAVVSEA  318 (366)
T ss_pred             cCCeEEEecCCCCeEEEEEcCCCcEEecc
Confidence            555555444 4556789999999887543

>KOG4441|consensus

Probab=86.43  E-value=33  Score=33.27  Aligned_cols=133  Identities=19%  Similarity=0.161  Sum_probs=68.6

Q ss_pred             eeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCC-C-----cEEEEeCCCCeEEE--EEeCCCCCeEEEEEecC
Q psy8430         143 SFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD-R-----TVRLWSTQTGKCVL--QYSGHSGSVNSVRFLPN  214 (361)
Q Consensus       143 ~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d-~-----~i~~wd~~~~~~~~--~~~~h~~~v~~v~~~~~  214 (361)
                      .+.+....+.....+..... -.++++.. +.+.++||.| |     ++..||..+.+-..  .+.......-...+  +
T Consensus       305 ~yd~~~~~w~~~a~m~~~r~-~~~~~~~~-~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~l--~  380 (571)
T KOG4441|consen  305 CYDPKTNEWSSLAPMPSPRC-RVGVAVLN-GKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAVL--D  380 (571)
T ss_pred             EecCCcCcEeecCCCCcccc-cccEEEEC-CEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeEEE--C
Confidence            44444444444444443333 33343333 4688888888 3     56677876654221  11111111111112  6


Q ss_pred             CCEEEEEECCC-----cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy8430         215 KDLVLSASGDK-----SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA  289 (361)
Q Consensus       215 ~~~l~s~~~d~-----~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~  289 (361)
                      |.+.+.|+.||     ++..||..+.                     .|.   .+..+.......-.+.+  +|...++|
T Consensus       381 g~iYavGG~dg~~~l~svE~YDp~~~---------------------~W~---~va~m~~~r~~~gv~~~--~g~iYi~G  434 (571)
T KOG4441|consen  381 GKLYAVGGFDGEKSLNSVECYDPVTN---------------------KWT---PVAPMLTRRSGHGVAVL--GGKLYIIG  434 (571)
T ss_pred             CEEEEEeccccccccccEEEecCCCC---------------------ccc---ccCCCCcceeeeEEEEE--CCEEEEEc
Confidence            88888999987     4667776544                     121   22222212222233334  78888888


Q ss_pred             eCCC------cEEEeeCCCCeE
Q psy8430         290 SWDR------VANLFDVETGTI  305 (361)
Q Consensus       290 ~~d~------~v~iwd~~~~~~  305 (361)
                      +.++      ++..||..+...
T Consensus       435 G~~~~~~~l~sve~YDP~t~~W  456 (571)
T KOG4441|consen  435 GGDGSSNCLNSVECYDPETNTW  456 (571)
T ss_pred             CcCCCccccceEEEEcCCCCce
Confidence            8654      456788776643

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=86.09  E-value=14  Score=34.48  Aligned_cols=125  Identities=14%  Similarity=0.147  Sum_probs=76.8

Q ss_pred             cCccceeeeEEeeccCCCeEEEEEcCCCC--------EEEEEeCCCcEEEEeCCC-CeEEEEEeCCCCCeEEEEEec---
Q psy8430         146 TSLLSCYKIRSFSGHRDGVWDVAVRPGQP--------VLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLP---  213 (361)
Q Consensus       146 ~~~~~~~~~~~l~~h~~~V~~l~~~~~~~--------~l~s~s~d~~i~~wd~~~-~~~~~~~~~h~~~v~~v~~~~---  213 (361)
                      .+-..++.+.++.-|...  -+.|.|+..        .|+ |-.+..|.-.|.+. |..+..-. ....++.-.|+.   
T Consensus       495 mDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlv-GlS~~svFrIDPR~~gNKi~v~e-sKdY~tKn~Fss~~t  570 (776)
T COG5167         495 MDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLV-GLSDYSVFRIDPRARGNKIKVVE-SKDYKTKNKFSSGMT  570 (776)
T ss_pred             eecccceeeeEeecCCcc--eeecCCchhHHhcCccceEE-eecccceEEecccccCCceeeee-ehhcccccccccccc
Confidence            344667777777777665  466777532        333 33344444445442 33333222 233444444554   


Q ss_pred             -CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy8430         214 -NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD  292 (361)
Q Consensus       214 -~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d  292 (361)
                       ...+++.|+..|-|++||--..                          .....+.+-...|..+..+.+|+++++.|. 
T Consensus       571 TesGyIa~as~kGDirLyDRig~--------------------------rAKtalP~lG~aIk~idvta~Gk~ilaTCk-  623 (776)
T COG5167         571 TESGYIAAASRKGDIRLYDRIGK--------------------------RAKTALPGLGDAIKHIDVTANGKHILATCK-  623 (776)
T ss_pred             ccCceEEEecCCCceeeehhhcc--------------------------hhhhcCcccccceeeeEeecCCcEEEEeec-
Confidence             3458999999999999984211                          123345566778888999999999988875 


Q ss_pred             CcEEEeeCC
Q psy8430         293 RVANLFDVE  301 (361)
Q Consensus       293 ~~v~iwd~~  301 (361)
                      ..+-+-|++
T Consensus       624 ~yllL~d~~  632 (776)
T COG5167         624 NYLLLTDVP  632 (776)
T ss_pred             ceEEEEecc
Confidence            667777765

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=86.01  E-value=18  Score=36.09  Aligned_cols=25  Identities=12%  Similarity=-0.093  Sum_probs=20.4

Q ss_pred             CcEEEEEEcCCCCEEEEEeCCCcEE
Q psy8430         272 NVVIAADWLSDGEQVITASWDRVAN  296 (361)
Q Consensus       272 ~~v~~~~~~~~~~~l~s~~~d~~v~  296 (361)
                      -.|..+.++|+|.+++..|..|.+.
T Consensus        85 f~v~~i~~n~~g~~lal~G~~~v~V  109 (717)
T PF10168_consen   85 FEVHQISLNPTGSLLALVGPRGVVV  109 (717)
T ss_pred             eeEEEEEECCCCCEEEEEcCCcEEE
Confidence            3688899999999999988866543

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)

Probab=85.94  E-value=20  Score=31.52  Aligned_cols=70  Identities=14%  Similarity=0.221  Sum_probs=51.1

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCC-----eEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430         163 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS-----VNSVRFLPNKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       163 ~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~-----v~~v~~~~~~~~l~s~~~d~~i~lwd~  232 (361)
                      .|+++...++|.+|+|+-.-.+|.+.|-.+|+.+..+.+....     -...+|-.+.+.+-....++.|.++|=
T Consensus       145 HiNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFDN  219 (299)
T PF14269_consen  145 HINSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFDN  219 (299)
T ss_pred             EeeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEcC
Confidence            3888888899999999999899999999999988887665221     112334334444545567889999985

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=85.90  E-value=11  Score=32.69  Aligned_cols=53  Identities=15%  Similarity=0.290  Sum_probs=37.9

Q ss_pred             CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE------CCCcEEEEecccc
Q psy8430         183 RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS------GDKSVHIWQAVIN  235 (361)
Q Consensus       183 ~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~------~d~~i~lwd~~~~  235 (361)
                      ..|++||..+.+-...-.+-.+.|.++.|..+.++++.|.      ....+..||..+.
T Consensus        16 ~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~   74 (281)
T PF12768_consen   16 PGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQ   74 (281)
T ss_pred             CEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCC
Confidence            3699999877654444445678899999997777777664      3456888887654

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=85.58  E-value=5.8  Score=31.60  Aligned_cols=29  Identities=14%  Similarity=0.275  Sum_probs=24.3

Q ss_pred             CeEEEEEecC------CCEEEEEECCCcEEEEecc
Q psy8430         205 SVNSVRFLPN------KDLVLSASGDKSVHIWQAV  233 (361)
Q Consensus       205 ~v~~v~~~~~------~~~l~s~~~d~~i~lwd~~  233 (361)
                      .|..++|+|.      +.+|++...++.+.||...
T Consensus        87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~  121 (173)
T PF12657_consen   87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPP  121 (173)
T ss_pred             cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecC
Confidence            7899999993      3468888999999999764

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>KOG4499|consensus

Probab=85.03  E-value=7  Score=32.51  Aligned_cols=47  Identities=17%  Similarity=0.138  Sum_probs=41.4

Q ss_pred             EEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec
Q psy8430         167 VAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP  213 (361)
Q Consensus       167 l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~  213 (361)
                      ++++.+|++.+++-.-++|...|..+|+.+.++.-....|+|++|--
T Consensus       217 m~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFgG  263 (310)
T KOG4499|consen  217 MTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFGG  263 (310)
T ss_pred             ceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEecC
Confidence            45577888888888889999999999999999998899999999953

>KOG1900|consensus

Probab=84.81  E-value=7.1  Score=40.45  Aligned_cols=94  Identities=11%  Similarity=0.056  Sum_probs=54.4

Q ss_pred             CCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCC-CCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEc
Q psy8430         203 SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDN-DSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWL  280 (361)
Q Consensus       203 ~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~  280 (361)
                      .-.|.|+....+|+.|++|-.|   .+|.+.-.....++.. ..........  ...... .+..+ ..+..+|..+++.
T Consensus       178 g~~V~~I~~t~nGRIF~~G~dg---~lyEl~Yq~~~gWf~~rc~Kiclt~s~--ls~lvP-s~~~~~~~~~dpI~qi~ID  251 (1311)
T KOG1900|consen  178 GVSVNCITYTENGRIFFAGRDG---NLYELVYQAEDGWFGSRCRKICLTKSV--LSSLVP-SLLSVPGSSKDPIRQITID  251 (1311)
T ss_pred             CceEEEEEeccCCcEEEeecCC---CEEEEEEeccCchhhcccccccCchhH--HHHhhh-hhhcCCCCCCCcceeeEec
Confidence            4567888877788888776544   5665543322111111 0000000000  000000 12222 3567799999998


Q ss_pred             CCCCEEEEEeCCCcEEEeeCCC
Q psy8430         281 SDGEQVITASWDRVANLFDVET  302 (361)
Q Consensus       281 ~~~~~l~s~~~d~~v~iwd~~~  302 (361)
                      ..-..+++-+..|+|.+||+..
T Consensus       252 ~SR~IlY~lsek~~v~~Y~i~~  273 (1311)
T KOG1900|consen  252 NSRNILYVLSEKGTVSAYDIGG  273 (1311)
T ss_pred             cccceeeeeccCceEEEEEccC
Confidence            8888999999999999999975

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=84.28  E-value=28  Score=30.45  Aligned_cols=71  Identities=18%  Similarity=0.346  Sum_probs=50.7

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEeCC------CC-eEEEEEeC-----CCCCeEEEEEecCC------------CE
Q psy8430         162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQ------TG-KCVLQYSG-----HSGSVNSVRFLPNK------------DL  217 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~------~~-~~~~~~~~-----h~~~v~~v~~~~~~------------~~  217 (361)
                      ..-|.|+++|.+.+-++....+...+||..      .. ..+.++..     .....+.+.|+...            ..
T Consensus        23 ~N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~  102 (336)
T TIGR03118        23 RNAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSR  102 (336)
T ss_pred             cccceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCccccee
Confidence            336789999999988888888999999986      12 22334432     23467788887532            23


Q ss_pred             EEEEECCCcEEEEec
Q psy8430         218 VLSASGDKSVHIWQA  232 (361)
Q Consensus       218 l~s~~~d~~i~lwd~  232 (361)
                      |+.++.||+|.=|..
T Consensus       103 Fif~tEdGTisaW~p  117 (336)
T TIGR03118       103 FLFVTEDGTLSGWAP  117 (336)
T ss_pred             EEEEeCCceEEeecC
Confidence            677899999999985

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>KOG2247|consensus

Probab=84.17  E-value=0.12  Score=46.97  Aligned_cols=129  Identities=14%  Similarity=0.204  Sum_probs=85.2

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEE-EEECCCcEEEEeccccccccC
Q psy8430         162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIWQAVINWECLN  240 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~~i~lwd~~~~~~~~~  240 (361)
                      ..-....|-|.+.-++.++.+..+..||- .|+...... ..+....++|.-++..++ .+-..+.+.+||+.+....  
T Consensus        35 v~pi~~~w~~e~~nlavaca~tiv~~YD~-agq~~le~n-~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytq--  110 (615)
T KOG2247|consen   35 VGPIIHRWRPEGHNLAVACANTIVIYYDK-AGQVILELN-PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQ--  110 (615)
T ss_pred             cccceeeEecCCCceehhhhhhHHHhhhh-hcceecccC-CchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHH--
Confidence            33344568887777888889989999995 355444444 456677888888777654 4567789999998755210  


Q ss_pred             CCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE
Q psy8430         241 NDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI  318 (361)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~  318 (361)
                                             .... +....-.-+.|++.+..++.+...|.+.|++..+.+.+....-|...+..
T Consensus       111 -----------------------qLE~-gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq  164 (615)
T KOG2247|consen  111 -----------------------QLES-GGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQ  164 (615)
T ss_pred             -----------------------HHhc-cCcchHHHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeE
Confidence                                   1111 11111112678888888999988999999998776655544435555555

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=84.00  E-value=3.2  Score=37.43  Aligned_cols=35  Identities=26%  Similarity=0.346  Sum_probs=27.8

Q ss_pred             CCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEE
Q psy8430         271 SNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  306 (361)
Q Consensus       271 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~  306 (361)
                      ...+....|+|+|++++-.. ++.|++++..++...
T Consensus        42 ~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~   76 (353)
T PF00930_consen   42 PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQET   76 (353)
T ss_dssp             ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEE
T ss_pred             ccccccceeecCCCeeEEEe-cCceEEEECCCCCeE
Confidence            56778889999999999886 578999998877544

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=83.99  E-value=5.4  Score=22.45  Aligned_cols=31  Identities=13%  Similarity=0.230  Sum_probs=19.7

Q ss_pred             eCCCCcEEEEEEcCCCCEEEEEeC-C--CcEEEe
Q psy8430         268 LGHSNVVIAADWLSDGEQVITASW-D--RVANLF  298 (361)
Q Consensus       268 ~~~~~~v~~~~~~~~~~~l~s~~~-d--~~v~iw  298 (361)
                      ......-....|+|||++|+-++. +  |...||
T Consensus         5 t~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen    5 TNSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             S-SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             ccCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence            334556777899999998876554 4  555555

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>PRK10115 protease 2; Provisional

Probab=83.79  E-value=49  Score=32.98  Aligned_cols=71  Identities=11%  Similarity=0.051  Sum_probs=44.6

Q ss_pred             CeEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECC------CcEEEEe
Q psy8430         163 GVWDVAVRPGQPVLGSASAD-----RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD------KSVHIWQ  231 (361)
Q Consensus       163 ~V~~l~~~~~~~~l~s~s~d-----~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d------~~i~lwd  231 (361)
                      .+..+.|+|+|++|+.+...     ..|++-|+.+|..+.......  -..++|.++++.|+-...+      ..|..++
T Consensus       128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~--~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~  205 (686)
T PRK10115        128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNV--EPSFVWANDSWTFYYVRKHPVTLLPYQVWRHT  205 (686)
T ss_pred             EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCc--ceEEEEeeCCCEEEEEEecCCCCCCCEEEEEE
Confidence            36667899999987766332     258888998886332211111  1468999998876554432      2466666


Q ss_pred             cccc
Q psy8430         232 AVIN  235 (361)
Q Consensus       232 ~~~~  235 (361)
                      +.++
T Consensus       206 lgt~  209 (686)
T PRK10115        206 IGTP  209 (686)
T ss_pred             CCCC
Confidence            6544

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=83.62  E-value=6.2  Score=22.44  Aligned_cols=40  Identities=25%  Similarity=0.199  Sum_probs=26.7

Q ss_pred             CCCCEEEE-EeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEE
Q psy8430         171 PGQPVLGS-ASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF  211 (361)
Q Consensus       171 ~~~~~l~s-~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~  211 (361)
                      |+++.|+. ...+++|.++|..+++.+..+.. ......++|
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v-g~~P~~i~~   41 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV-GGYPFGVAV   41 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC-CCCCceEEe
Confidence            56665555 44578999999988888777764 333444444

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>PRK13684 Ycf48-like protein; Provisional

Probab=83.12  E-value=31  Score=30.81  Aligned_cols=66  Identities=14%  Similarity=0.213  Sum_probs=39.9

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEE-EeCCCCe-EEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEE
Q psy8430         161 RDGVWDVAVRPGQPVLGSASADRTVRL-WSTQTGK-CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI  229 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~-wd~~~~~-~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~l  229 (361)
                      .+.+.++.+.|++.+++.+ ..|.+.. ++- .++ -...-..-...++++.+.+++..++.+ ..|.+.+
T Consensus       172 ~g~~~~i~~~~~g~~v~~g-~~G~i~~s~~~-gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~  239 (334)
T PRK13684        172 AGVVRNLRRSPDGKYVAVS-SRGNFYSTWEP-GQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRF  239 (334)
T ss_pred             cceEEEEEECCCCeEEEEe-CCceEEEEcCC-CCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEE
Confidence            4678899999988666554 4555543 221 222 111222345688999999988876654 4576543

>KOG2377|consensus

Probab=82.68  E-value=33  Score=31.71  Aligned_cols=32  Identities=16%  Similarity=0.352  Sum_probs=28.7

Q ss_pred             CCCCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430         201 GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       201 ~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~  232 (361)
                      ...++|.++.|++|.+.++.--.|++|.+++.
T Consensus        64 ~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf   95 (657)
T KOG2377|consen   64 DDKGEIKSIKFSLDNKILAVQRTSKTVDFCNF   95 (657)
T ss_pred             cCCCceeEEEeccCcceEEEEecCceEEEEec
Confidence            45679999999999999999999999999976

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=82.61  E-value=33  Score=30.14  Aligned_cols=83  Identities=7%  Similarity=0.076  Sum_probs=42.3

Q ss_pred             eEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeC-------CCCCeEEEEEe
Q psy8430         140 IVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG-------HSGSVNSVRFL  212 (361)
Q Consensus       140 ~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~-------h~~~v~~v~~~  212 (361)
                      +...+.++.....+...  .-...|..+.|.|++.+.+.+ ..|.|+.=+...  ...++..       -.-.+..++|.
T Consensus       167 ~~~s~~~G~~~w~~~~r--~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~--~~~~w~~~~~~~~~~~~~~ld~a~~  241 (302)
T PF14870_consen  167 FYSSWDPGQTTWQPHNR--NSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPD--DGETWSEPIIPIKTNGYGILDLAYR  241 (302)
T ss_dssp             EEEEE-TT-SS-EEEE----SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TT--EEEEE---B-TTSS--S-EEEEEES
T ss_pred             EEEEecCCCccceEEcc--CccceehhceecCCCCEEEEe-CCcEEEEccCCC--CccccccccCCcccCceeeEEEEec
Confidence            33344444444444433  245789999999998776654 788888766211  1222221       22347899999


Q ss_pred             cCCCEEEEEECCCcEE
Q psy8430         213 PNKDLVLSASGDKSVH  228 (361)
Q Consensus       213 ~~~~~l~s~~~d~~i~  228 (361)
                      ++....++|+ .|.+.
T Consensus       242 ~~~~~wa~gg-~G~l~  256 (302)
T PF14870_consen  242 PPNEIWAVGG-SGTLL  256 (302)
T ss_dssp             SSS-EEEEES-TT-EE
T ss_pred             CCCCEEEEeC-CccEE
Confidence            8877777555 44443

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=82.53  E-value=19  Score=27.21  Aligned_cols=70  Identities=11%  Similarity=0.048  Sum_probs=47.1

Q ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEeCCCC--------eEEEEEeCCCCCeEEEEEec-----CCCEEEEEECCCcEEEEe
Q psy8430         165 WDVAVRPGQPVLGSASADRTVRLWSTQTG--------KCVLQYSGHSGSVNSVRFLP-----NKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       165 ~~l~~~~~~~~l~s~s~d~~i~~wd~~~~--------~~~~~~~~h~~~v~~v~~~~-----~~~~l~s~~~d~~i~lwd  231 (361)
                      ..-.|+....-|++++.-|.|.|.+....        ..+..+. -...|++++-.+     ....|+.| ....+..||
T Consensus         2 aiGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliG-t~t~llaYD   79 (136)
T PF14781_consen    2 AIGKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIG-TQTSLLAYD   79 (136)
T ss_pred             eEEEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEe-ccceEEEEE
Confidence            34467777788999999999999987633        2334444 566777776554     23345554 456789999


Q ss_pred             ccccc
Q psy8430         232 AVINW  236 (361)
Q Consensus       232 ~~~~~  236 (361)
                      +..+.
T Consensus        80 V~~N~   84 (136)
T PF14781_consen   80 VENNS   84 (136)
T ss_pred             cccCc
Confidence            87663

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=82.47  E-value=18  Score=35.17  Aligned_cols=95  Identities=14%  Similarity=0.183  Sum_probs=66.0

Q ss_pred             eccceeEEeeecCccceeeeEEeeccCCCeEEEEEc--CCCCEEEEEeCCCcEEEEeCC---------CCeEEEEE--eC
Q psy8430         135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVR--PGQPVLGSASADRTVRLWSTQ---------TGKCVLQY--SG  201 (361)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~--~~~~~l~s~s~d~~i~~wd~~---------~~~~~~~~--~~  201 (361)
                      ..++..+++|+......+....+ ...+.|.+++|.  |+|+.+++.|..+.|.++.-.         +...+..+  ..
T Consensus        47 ~~~~~~LtIWD~~~~~lE~~~~f-~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~  125 (631)
T PF12234_consen   47 DSSRSELTIWDTRSGVLEYEESF-SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISS  125 (631)
T ss_pred             ECCCCEEEEEEcCCcEEEEeeee-cCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeec
Confidence            34455667788777666666666 456889999986  588899999999999998531         11233333  33


Q ss_pred             CC-CCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430         202 HS-GSVNSVRFLPNKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       202 h~-~~v~~v~~~~~~~~l~s~~~d~~i~lwd~  232 (361)
                      |+ .+|.+..|.++|..++.+  +..+.|+|-
T Consensus       126 ~T~h~Igds~Wl~~G~LvV~s--GNqlfv~dk  155 (631)
T PF12234_consen  126 HTPHPIGDSIWLKDGTLVVGS--GNQLFVFDK  155 (631)
T ss_pred             CCCCCccceeEecCCeEEEEe--CCEEEEECC
Confidence            44 689999999998777654  456777763

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins

Probab=82.11  E-value=42  Score=31.73  Aligned_cols=141  Identities=17%  Similarity=0.135  Sum_probs=59.5

Q ss_pred             EEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCC---eEEEEEecCCCEEEEEE--------------CCCcEEE
Q psy8430         167 VAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS---VNSVRFLPNKDLVLSAS--------------GDKSVHI  229 (361)
Q Consensus       167 l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~---v~~v~~~~~~~~l~s~~--------------~d~~i~l  229 (361)
                      +..-++|.+++..+  ..+..+|+. |+.+..+.-..+.   =+.+.+.|+|++|+.+.              .|. |..
T Consensus       153 ~~~l~nG~ll~~~~--~~~~e~D~~-G~v~~~~~l~~~~~~~HHD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~-Ive  228 (477)
T PF05935_consen  153 FKQLPNGNLLIGSG--NRLYEIDLL-GKVIWEYDLPGGYYDFHHDIDELPNGNLLILASETKYVDEDKDVDTVEDV-IVE  228 (477)
T ss_dssp             EEE-TTS-EEEEEB--TEEEEE-TT---EEEEEE--TTEE-B-S-EEE-TTS-EEEEEEETTEE-TS-EE---S-E-EEE
T ss_pred             eeEcCCCCEEEecC--CceEEEcCC-CCEEEeeecCCcccccccccEECCCCCEEEEEeecccccCCCCccEecCE-EEE
Confidence            66778888777665  788888884 6665555422111   24566778888887776              122 222


Q ss_pred             EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCC--CcEEEEEEcC-CCCEEEEEeCCCcEEEeeCCCCeEE
Q psy8430         230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHS--NVVIAADWLS-DGEQVITASWDRVANLFDVETGTIL  306 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~  306 (361)
                      +| .+++.+..-....-+............. ..........  --+.++.+.+ ++..++++-.-..|...|.++++..
T Consensus       229 vd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~-~~~~~~~~~~DW~H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~  306 (477)
T PF05935_consen  229 VD-PTGEVVWEWDFFDHLDPYRDTVLKPYPY-GDISGSGGGRDWLHINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIK  306 (477)
T ss_dssp             E--TTS-EEEEEEGGGTS-TT--TTGGT--S-SSSS-SSTTSBS--EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EE
T ss_pred             EC-CCCCEEEEEehHHhCCcccccccccccc-cccccCCCCCCccccCccEEeCCCCeEEEEcCcceEEEEEECCCCcEE
Confidence            33 2221111000000000000000000000 0000000111  2478889998 5555555555568999999999888


Q ss_pred             EEeecCC
Q psy8430         307 QSLTGHD  313 (361)
Q Consensus       307 ~~~~~h~  313 (361)
                      -.+..+.
T Consensus       307 Wilg~~~  313 (477)
T PF05935_consen  307 WILGPPG  313 (477)
T ss_dssp             EEES-ST
T ss_pred             EEeCCCC
Confidence            7776554

Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.

>PF07716 bZIP_2: Basic region leucine zipper; InterPro: IPR011700 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotes are proteins that contain a basic region mediating sequence-specific DNA-binding, followed by a leucine zipper region (see IPR002158 from INTERPRO), which is required for dimerization

Probab=81.90  E-value=7.1  Score=24.14  Aligned_cols=35  Identities=23%  Similarity=0.226  Sum_probs=30.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHh
Q psy8430          50 VKFKLNSLFSQIEREFELLYLENLNLQDKIDMLME   84 (361)
Q Consensus        50 ~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~   84 (361)
                      .+.+......+++.++..|..+|..|+..+..|+.
T Consensus        19 ~R~rkk~~~~~le~~~~~L~~en~~L~~~i~~L~~   53 (54)
T PF07716_consen   19 SRQRKKQREEELEQEVQELEEENEQLRQEIAQLER   53 (54)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            56677788888999999999999999999988764

; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0046983 protein dimerization activity, 0006355 regulation of transcription, DNA-dependent; PDB: 1NWQ_A 1H89_B 1H88_A 1GTW_B 2E43_A 1IO4_A 1GU4_B 2E42_A 1H8A_B 1GU5_B ....

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=81.44  E-value=7.4  Score=21.84  Aligned_cols=32  Identities=9%  Similarity=0.075  Sum_probs=19.7

Q ss_pred             eeccCCCeEEEEEcCCCCEEEEEe-CC--CcEEEE
Q psy8430         157 FSGHRDGVWDVAVRPGQPVLGSAS-AD--RTVRLW  188 (361)
Q Consensus       157 l~~h~~~V~~l~~~~~~~~l~s~s-~d--~~i~~w  188 (361)
                      +.-..+.-....|+|||+.|+-++ .+  |...||
T Consensus         4 ~t~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen    4 LTNSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             ES-SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             cccCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence            344556778889999998665544 44  555554

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=80.54  E-value=4.7  Score=38.82  Aligned_cols=38  Identities=32%  Similarity=0.525  Sum_probs=29.0

Q ss_pred             CCeEEEEEcC----CCCEEEEEeCCCcEEEEeCCCCeEEEEE
Q psy8430         162 DGVWDVAVRP----GQPVLGSASADRTVRLWSTQTGKCVLQY  199 (361)
Q Consensus       162 ~~V~~l~~~~----~~~~l~s~s~d~~i~~wd~~~~~~~~~~  199 (361)
                      +.+..+++++    +..++++-+.|+++|+||+.+++++.+.
T Consensus       215 ~~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~  256 (547)
T PF11715_consen  215 SVAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATI  256 (547)
T ss_dssp             --EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEE
T ss_pred             CccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence            4456666766    6779999999999999999999986665

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	361
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		7e-15
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		8e-15
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		1e-14
2gnq_A	336	Structure Of Wdr5 Length = 336		1e-14
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		1e-14
2h9l_A	329	Wdr5delta23 Length = 329		1e-14
2g99_A	308	Structural Basis For The Specific Recognition Of Me		2e-14
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		2e-14
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		2e-14
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		2e-14
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		2e-14
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		2e-14
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		2e-14
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		2e-14
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		2e-14
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		2e-14
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		2e-14
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		9e-14
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		1e-13
1nex_B	464	Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp		1e-09
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		1e-09
3mks_B	464	Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH		1e-09
1erj_A	393	Crystal Structure Of The C-Terminal Wd40 Domain Of		1e-08
2ovp_B	445	Structure Of The Skp1-Fbw7 Complex Length = 445		1e-08
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		4e-08
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		4e-08
3iza_B	1263	Structure Of An Apoptosome-Procaspase-9 Card Comple		7e-08
3fm0_A	345	Crystal Structure Of Wd40 Protein Ciao1 Length = 34		1e-07
3fm0_A	345	Crystal Structure Of Wd40 Protein Ciao1 Length = 34		2e-04
1p22_A	435	Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex		3e-07
3dm0_A	694	Maltose Binding Protein Fusion With Rack1 From A. T		3e-07
3izb_a	319	Localization Of The Small Subunit Ribosomal Protein		5e-07
3izb_a	319	Localization Of The Small Subunit Ribosomal Protein		1e-05
1trj_A	314	Homology Model Of Yeast Rack1 Protein Fitted Into 1		5e-07
1trj_A	314	Homology Model Of Yeast Rack1 Protein Fitted Into 1		1e-05
3jyv_R	313	Structure Of The 40s Rrna And Proteins And PE TRNA		6e-07
3jyv_R	313	Structure Of The 40s Rrna And Proteins And PE TRNA		1e-05
3rfg_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		6e-07
3rfg_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		1e-05
2xzm_R	343	Crystal Structure Of The Eukaryotic 40s Ribosomal S		6e-07
3rfh_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		6e-07
3rfh_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		1e-05
3frx_A	319	Crystal Structure Of The Yeast Orthologue Of Rack1,		1e-06
3frx_A	319	Crystal Structure Of The Yeast Orthologue Of Rack1,		1e-05
4aow_A	340	Crystal Structure Of The Human Rack1 Protein At A R		2e-06
2zkq_a	317	Structure Of A Mammalian Ribosomal 40s Subunit With		2e-06
2yno_A	310	Yeast Betaprime Cop 1-304h6 Length = 310		3e-06
2ynn_A	304	Yeast Betaprime Cop 1-304 With Ktktn Motif Length =		3e-06
3mkq_A	814	Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco		4e-06
3mkq_A	814	Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco		5e-06
2ynp_A	604	Yeast Betaprime Cop 1-604 With Ktktn Motif Length =		5e-06
2ynp_A	604	Yeast Betaprime Cop 1-604 With Ktktn Motif Length =		6e-06
3jzn_A	366	Structure Of Eed In Apo Form Length = 366		5e-06
3iiw_A	365	Crystal Structure Of Eed In Complex With A Trimethy		5e-06
3iiy_A	365	Crystal Structure Of Eed In Complex With A Trimethy		6e-06
2pbi_B	354	The Multifunctional Nature Of Gbeta5RGS9 REVEALED F		6e-06
3jpx_A	402	Eed: A Novel Histone Trimethyllysine Binder Within		6e-06
2qxv_A	361	Structural Basis Of Ezh2 Recognition By Eed Length		7e-06
3ow8_A	321	Crystal Structure Of The Wd Repeat-Containing Prote		6e-05
1got_B	340	Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer		2e-04
3sn6_B	351	Crystal Structure Of The Beta2 Adrenergic Receptor-		2e-04
1a0r_B	340	Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-		2e-04
1gg2_B	340	G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet		2e-04
2bcj_B	340	Crystal Structure Of G Protein-coupled Receptor Kin		2e-04
3odt_A	313	Crystal Structure Of Wd40 Beta Propeller Domain Of		3e-04
3iz6_a	380	Localization Of The Small Subunit Ribosomal Protein		3e-04
2xyi_A	430	Crystal Structure Of Nurf55 In Complex With A H4 Pe		8e-04
3c99_A	432	Structural Basis Of Histone H4 Recognition By P55 L		8e-04

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 29/174 (16%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +++  GH + V+     P   ++ S S D +VR+W  +TG C+     HS  V++V F  
Sbjct: 103 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGMCLKTLPAHSDPVSAVHFNR 162
Query: 214 NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNV 273
           +  L++S+S D    IW      +C                         +K L+   N 
Sbjct: 163 DGSLIVSSSYDGLCRIWDTASG-QC-------------------------LKTLIDDDNP 196
Query: 274 VIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
            ++   +  +G+ ++ A+ D    L+D   G  L++ TGH  E +  C+ + +S
Sbjct: 197 PVSFVKFSPNGKYILAATLDNDLKLWDYSKGKCLKTYTGHKNEKY--CIFANFS 248

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 29/174 (16%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +++  GH + V+     P   ++ S S D +VR+W  +TG C+     HS  V++V F  
Sbjct: 103 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGMCLKTLPAHSDPVSAVHFNR 162
Query: 214 NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNV 273
           +  L++S+S D    IW      +C                         +K L+   N 
Sbjct: 163 DGSLIVSSSYDGLCRIWDTASG-QC-------------------------LKTLIDDDNP 196
Query: 274 VIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
            ++   +  +G+ ++ A+ D    L+D   G  L++ TGH  E +  C+ + +S
Sbjct: 197 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY--CIFANFS 248

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 29/174 (16%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 214 NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNV 273
           +  L++S+S D    IW      +C                         +K L+   N 
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASG-QC-------------------------LKTLIDDDNP 215
Query: 274 VIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
            ++   +  +G+ ++ A+ D    L+D   G  L++ TGH  E +  C+ + +S
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY--CIFANFS 267

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 29/174 (16%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 124 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 183
Query: 214 NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNV 273
           +  L++S+S D    IW      +C                         +K L+   N 
Sbjct: 184 DGSLIVSSSYDGLCRIWDTASG-QC-------------------------LKTLIDDDNP 217
Query: 274 VIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
            ++   +  +G+ ++ A+ D    L+D   G  L++ TGH  E +  C+ + +S
Sbjct: 218 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY--CIFANFS 269

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 29/174 (16%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 100 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 159
Query: 214 NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNV 273
           +  L++S+S D    IW      +C                         +K L+   N 
Sbjct: 160 DGSLIVSSSYDGLCRIWDTASG-QC-------------------------LKTLIDDDNP 193
Query: 274 VIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
            ++   +  +G+ ++ A+ D    L+D   G  L++ TGH  E +  C+ + +S
Sbjct: 194 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY--CIFANFS 245

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 29/174 (16%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 117 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 176
Query: 214 NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNV 273
           +  L++S+S D    IW      +C                         +K L+   N 
Sbjct: 177 DGSLIVSSSYDGLCRIWDTASG-QC-------------------------LKTLIDDDNP 210
Query: 274 VIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
            ++   +  +G+ ++ A+ D    L+D   G  L++ TGH  E +  C+ + +S
Sbjct: 211 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY--CIFANFS 262

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 29/174 (16%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 96  LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 155
Query: 214 NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNV 273
           +  L++S+S D    IW      +C                         +K L+   N 
Sbjct: 156 DGSLIVSSSYDGLCRIWDTASG-QC-------------------------LKTLIDDDNP 189
Query: 274 VIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
            ++   +  +G+ ++ A+ D    L+D   G  L++ TGH  E +  C+ + +S
Sbjct: 190 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY--CIFANFS 241

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 29/174 (16%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 100 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 159
Query: 214 NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNV 273
           +  L++S+S D    IW      +C                         +K L+   N 
Sbjct: 160 DGSLIVSSSYDGLCRIWDTASG-QC-------------------------LKTLIDDDNP 193
Query: 274 VIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
            ++   +  +G+ ++ A+ D    L+D   G  L++ TGH  E +  C+ + +S
Sbjct: 194 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY--CIFANFS 245

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 29/174 (16%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 106 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 165
Query: 214 NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNV 273
           +  L++S+S D    IW      +C                         +K L+   N 
Sbjct: 166 DGSLIVSSSYDGLCRIWDTASG-QC-------------------------LKTLIDDDNP 199
Query: 274 VIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
            ++   +  +G+ ++ A+ D    L+D   G  L++ TGH  E +  C+ + +S
Sbjct: 200 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY--CIFANFS 251

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 29/174 (16%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 101 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 160
Query: 214 NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNV 273
           +  L++S+S D    IW      +C                         +K L+   N 
Sbjct: 161 DGSLIVSSSYDGLCRIWDTASG-QC-------------------------LKTLIDDDNP 194
Query: 274 VIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
            ++   +  +G+ ++ A+ D    L+D   G  L++ TGH  E +  C+ + +S
Sbjct: 195 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY--CIFANFS 246

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 29/174 (16%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 106 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 165
Query: 214 NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNV 273
           +  L++S+S D    IW      +C                         +K L+   N 
Sbjct: 166 DGSLIVSSSYDGLCRIWDTASG-QC-------------------------LKTLIDDDNP 199
Query: 274 VIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
            ++   +  +G+ ++ A+ D    L+D   G  L++ TGH  E +  C+ + +S
Sbjct: 200 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY--CIFANFS 251

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 29/174 (16%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 106 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 165
Query: 214 NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNV 273
           +  L++S+S D    IW      +C                         +K L+   N 
Sbjct: 166 DGSLIVSSSYDGLCRIWDTASG-QC-------------------------LKTLIDDDNP 199
Query: 274 VIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
            ++   +  +G+ ++ A+ D    L+D   G  L++ TGH  E +  C+ + +S
Sbjct: 200 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY--CIFANFS 251

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 29/174 (16%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 103 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 162
Query: 214 NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNV 273
           +  L++S+S D    IW      +C                         +K L+   N 
Sbjct: 163 DGSLIVSSSYDGLCRIWDTASG-QC-------------------------LKTLIDDDNP 196
Query: 274 VIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
            ++   +  +G+ ++ A+ D    L+D   G  L++ TGH  E +  C+ + +S
Sbjct: 197 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY--CIFANFS 248

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 29/174 (16%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 105 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 164
Query: 214 NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNV 273
           +  L++S+S D    IW      +C                         +K L+   N 
Sbjct: 165 DGSLIVSSSYDGLCRIWDTASG-QC-------------------------LKTLIDDDNP 198
Query: 274 VIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
            ++   +  +G+ ++ A+ D    L+D   G  L++ TGH  E +  C+ + +S
Sbjct: 199 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY--CIFANFS 250

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 29/174 (16%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 103 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 162
Query: 214 NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNV 273
           +  L++S+S D    IW      +C                         +K L+   N 
Sbjct: 163 DGSLIVSSSYDGLCRIWDTASG-QC-------------------------LKTLIDDDNP 196
Query: 274 VIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
            ++   +  +G+ ++ A+ D    L+D   G  L++ TGH  E +  C+ + +S
Sbjct: 197 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY--CIFANFS 248

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 29/174 (16%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 99  LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 158
Query: 214 NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNV 273
           +  L++S+S D    IW      +C                         +K L+   N 
Sbjct: 159 DGSLIVSSSYDGLCRIWDTASG-QC-------------------------LKTLIDDDNP 192
Query: 274 VIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
            ++   +  +G+ ++ A+ D    L+D   G  L++ TGH  E +  C+ + +S
Sbjct: 193 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY--CIFANFS 244

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 29/174 (16%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 103 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 162
Query: 214 NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNV 273
           +  L++S+S D    IW      +C                         +K L+   N 
Sbjct: 163 DGSLIVSSSYDGLCRIWDTASG-QC-------------------------LKTLIDDDNP 196
Query: 274 VIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
            ++   +  +G+ ++ A+ D    L+D   G  L++ TGH  E +  C+ + +S
Sbjct: 197 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY--CIFANFS 248

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 74.3 bits (181), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 41/209 (19%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +++ +GH   VW VA  P    + SAS D+TV+LW+ + G+ +   +GHS SV  V F P
Sbjct: 173 LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVRGVAFSP 231
Query: 214 NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNV 273
           +   + SAS DK+V +W                       + +   L+T    L GHS+ 
Sbjct: 232 DGQTIASASDDKTVKLW-----------------------NRNGQLLQT----LTGHSSS 264
Query: 274 VIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE-------EPHILCVSSYYS 326
           V    +  DG+ + +AS D+   L++   G +LQ+LTGH          P    ++S   
Sbjct: 265 VNGVAFRPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVWGVAFSPDGQTIASASD 323
Query: 327 KVSCDLFQR-IQHLDCGTSENPIHSVCVF 354
             +  L+ R  QHL   T     HS  V+
Sbjct: 324 DKTVKLWNRNGQHLQTLTG----HSSSVW 348

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 36/195 (18%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
           R+  GH D V D++      +L S SAD T++LW  Q  +C+    GH  +V+SV  +PN
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPN 203
Query: 215 KDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSI---------TLRTPV- 264
            D ++SAS DK++ +W+    +                P++            T+R  V 
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 265 ------KELLGHSNVVIAADWLSD--------------------GEQVITASWDRVANLF 298
                  EL  H +VV    W  +                    G  +++ S D+   ++
Sbjct: 264 ATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 299 DVETGTILQSLTGHD 313
           DV TG  L +L GHD
Sbjct: 324 DVSTGMCLMTLVGHD 338

>pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
            SGH  GVW +    G  +L S S DRTVR+W  + G C   + GH+ +V  +  +  K+
Sbjct: 158 LSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKN 216
Query: 217 L--VLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESS-----ITLRTP------ 263
           +  +++ S D ++H+W+                 ES  PD        +   TP      
Sbjct: 217 IKYIVTGSRDNTLHVWKL--------------PKESSVPDHGEEHDYPLVFHTPEENPYF 262
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPH 317
           V  L GH   V        G  V++ S+D    ++DV     L  L+GH +  +
Sbjct: 263 VGVLRGHXASVRTVS--GHGNIVVSGSYDNTLIVWDVAQXKCLYILSGHTDRIY 314

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 23/158 (14%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
           R   GH   V DVA+        SAS D ++RLW+ Q G+C  ++ GH+  V SV F P+
Sbjct: 61  RRLEGHSAFVSDVALSNNGNFAVSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPD 120
Query: 215 KDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNVV 274
              ++S   D ++ +W   +  EC          +       S +L  PV          
Sbjct: 121 NRQIVSGGRDNALRVWN--VKGECMHTLSRGAHTDWVSCVRFSPSLDAPV---------- 168
Query: 275 IAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
                      +++  WD +  ++D+ TG ++  L GH
Sbjct: 169 -----------IVSGGWDNLVKVWDLATGRLVTDLKGH 195

>pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
            SGH  GVW +    G  +L S S DRTVR+W  + G C   + GH+ +V  +  +  K+
Sbjct: 158 LSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKN 216
Query: 217 L--VLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESS-----ITLRTP------ 263
           +  +++ S D ++H+W+                 ES  PD        +   TP      
Sbjct: 217 IKYIVTGSRDNTLHVWKL--------------PKESSVPDHGEEHDYPLVFHTPEENPYF 262
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPH 317
           V  L GH   V        G  V++ S+D    ++DV     L  L+GH +  +
Sbjct: 263 VGVLRGHMASVRTVS--GHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIY 314

>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 26/148 (17%)
Query: 167 VAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS 226
           V   P    L + + DR +R+W  +  K V+   GH   + S+ + P+ D ++S SGD++
Sbjct: 129 VCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRT 188
Query: 227 VHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV 286
           V IW                        + S+TL            V   A    DG+ +
Sbjct: 189 VRIWDL-------------------RTGQCSLTLSI-------EDGVTTVAVSPGDGKYI 222
Query: 287 ITASWDRVANLFDVETGTILQSLTGHDE 314
              S DR   ++D ETG +++ L   +E
Sbjct: 223 AAGSLDRAVRVWDSETGFLVERLDSENE 250

>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 23/220 (10%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
           +   GH D V       G  ++ S S D T+++WS  TGKC+    GH+G V S +   N
Sbjct: 112 KVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 170
Query: 215 KDLVLSASGDKSVHIWQAVINWECXXXXXXXXXX-------ESKEPDES-SITLRTPVKE 266
             +++S S D+++ +W A    EC                 E +    S   TLR    E
Sbjct: 171 --IIISGSTDRTLKVWNAETG-ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIE 227
Query: 267 -------LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHIL 319
                  L+GH   V    +  DG +V++ ++D +  ++D ET T L +L GH    + L
Sbjct: 228 TGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 285
Query: 320 CVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQS 359
                +  VS  L   I+  D  T  N IH++   Q + S
Sbjct: 286 QFDGIHV-VSGSLDTSIRVWDVETG-NCIHTLTGHQSLTS 323

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 15/139 (10%)
Query: 175 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI 234
           +L + S D  ++LW     +C     GH+ SVN  RF P+ +L+ S S D ++ +W    
Sbjct: 722 LLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRS 781
Query: 235 NWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRV 294
             E            S++P E                 +V    W +DG+++I A+ ++V
Sbjct: 782 ANERKSINVKRFFLSSEDPPEDV-------------EVIVKCCSWSADGDKIIVAAKNKV 828
Query: 295 ANLFDVETGTILQSL-TGH 312
             LFD+ T  +L  + TGH
Sbjct: 829 L-LFDIHTSGLLAEIHTGH 846

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 15/139 (10%)
Query: 175 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI 234
           +L + S D  ++LW     +C     GH+ SVN  RF P+ +L+ S S D ++ +W    
Sbjct: 715 LLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRS 774
Query: 235 NWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRV 294
             E            S++P E                 +V    W +DG+++I A+ ++V
Sbjct: 775 ANERKSINVKRFFLSSEDPPEDV-------------EVIVKCCSWSADGDKIIVAAKNKV 821
Query: 295 ANLFDVETGTILQSL-TGH 312
             LFD+ T  +L  + TGH
Sbjct: 822 L-LFDIHTSGLLAEIHTGH 839

>pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 8/138 (5%)
Query: 100 NDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRS-FS 158
           +D ECVT +  + N+ K +A  PS   L T ++      K V  ++      Y+  S  +
Sbjct: 93  DDFECVTTLEGHENEVKSVAWAPSGNLLATCSR-----DKSVWVWEVDEEDEYECVSVLN 147
Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLPNKD 216
            H   V  V   P Q +L SAS D TV+L+  +     C     GH  +V S+ F P+  
Sbjct: 148 SHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQ 207
Query: 217 LVLSASGDKSVHIWQAVI 234
            + S S D++V IW+  +
Sbjct: 208 RLASCSDDRTVRIWRQYL 225

>pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 61/162 (37%), Gaps = 39/162 (24%)
Query: 164 VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ---YSGHSGSVNSVRFLPNKDLVLS 220
            W +A  P   +L S   DR +R+W T+    + +     GH  +V  V + P  + + S
Sbjct: 19  CWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLAS 78
Query: 221 ASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNVVIAADWL 280
           AS D +  IW+                   K  D+        V  L GH N V +  W 
Sbjct: 79  ASFDATTCIWK-------------------KNQDDFEC-----VTTLEGHENEVKSVAWA 114
Query: 281 SDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
             G  + T S D+   +++V            DEE    CVS
Sbjct: 115 PSGNLLATCSRDKSVWVWEV------------DEEDEYECVS 144

>pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 41/220 (18%)
Query: 128 KTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRL 187
           K  + L+  T KI   +  + L C +I   +GH   V  + ++  + V+ + S+D TVR+
Sbjct: 145 KIVSGLRDNTIKI---WDKNTLECKRI--LTGHTGSV--LCLQYDERVIITGSSDSTVRV 197
Query: 188 WSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXX 247
           W   TG+ +     H  +V  +RF  N  ++++ S D+S+ +W                 
Sbjct: 198 WDVNTGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMA-------------- 241
Query: 248 XESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ 307
                   + ITLR   + L+GH   V   D+  D + +++AS DR   +++  T   ++
Sbjct: 242 ------SPTDITLR---RVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVR 290
Query: 308 SLTGHDEEPHILCVSSYYSKV----SCDLFQRIQHLDCGT 343
           +L GH     I C+  Y  ++    S D   R+  ++CG 
Sbjct: 291 TLNGHKRG--IACL-QYRDRLVVSGSSDNTIRLWDIECGA 327

>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 75/181 (41%), Gaps = 34/181 (18%)
Query: 148 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS----GHS 203
           L +    R F GH   V  VA       + SAS DRT++LW+T  G+C    S    GH 
Sbjct: 459 LAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNT-LGECKYTISEGGEGHR 517
Query: 204 GSVNSVRFLPN--KDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLR 261
             V+ VRF PN  +  ++SAS DK+V +W                         S+  LR
Sbjct: 518 DWVSCVRFSPNTLQPTIVSASWDKTVKVWNL-----------------------SNCKLR 554
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCV 321
           +    L GH+  V       DG    +   D V  L+D+  G  L SL   +   H LC 
Sbjct: 555 S---TLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCF 610
Query: 322 S 322
           S
Sbjct: 611 S 611

>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +RSF GH   V D  +        SAS D+T+RLW   TG+   ++ GH   V SV    
Sbjct: 58  VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK 117
Query: 214 NKDLVLSASGDKSVHIW 230
              +++S S DK++ +W
Sbjct: 118 KASMIISGSRDKTIKVW 134

>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 22/113 (19%)
Query: 201 GHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSIT 259
           GH+G V S+     + +L+LSAS DK++      I+W+                D+    
Sbjct: 15  GHNGWVTSLATSAGQPNLLLSASRDKTL------ISWKLTG-------------DDQKFG 55
Query: 260 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
           +  PV+   GHS++V      +DG   ++ASWD+   L+DV TG   Q   GH
Sbjct: 56  V--PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGH 106

>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +RSF GH   V D  +        SAS D+T+RLW   TG+   ++ GH   V SV    
Sbjct: 58  VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK 117
Query: 214 NKDLVLSASGDKSVHIW 230
              +++S S DK++ +W
Sbjct: 118 KASMIISGSRDKTIKVW 134

>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 22/113 (19%)
Query: 201 GHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSIT 259
           GH+G V S+     + +L+LSAS DK++      I+W+                D+    
Sbjct: 15  GHNGWVTSLATSAGQPNLLLSASRDKTL------ISWKLTG-------------DDQKFG 55
Query: 260 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
           +  PV+   GHS++V      +DG   ++ASWD+   L+DV TG   Q   GH
Sbjct: 56  V--PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGH 106

>pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +RSF GH   V D  +        SAS D+T+RLW   TG+   ++ GH   V SV    
Sbjct: 52  VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK 111
Query: 214 NKDLVLSASGDKSVHIW 230
              +++S S DK++ +W
Sbjct: 112 KASMIISGSRDKTIKVW 128

>pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 22/116 (18%)
Query: 201 GHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSIT 259
           GH+G V S+     + +L+LSAS DK++      I+W+                D+    
Sbjct: 9   GHNGWVTSLATSAGQPNLLLSASRDKTL------ISWKLTG-------------DDQKFG 49
Query: 260 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
           +  PV+   GHS++V      +DG   ++ASWD+   L+DV TG   Q   GH  +
Sbjct: 50  V--PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSD 103

>pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +RSF GH   V D  +        SAS D+T+RLW   TG+   ++ GH   V SV    
Sbjct: 58  VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK 117
Query: 214 NKDLVLSASGDKSVHIW 230
              +++S S DK++ +W
Sbjct: 118 KASMIISGSRDKTIKVW 134

>pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 22/113 (19%)
Query: 201 GHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSIT 259
           GH+G V S+     + +L+LSAS DK++      I+W+                D+    
Sbjct: 15  GHNGWVTSLATSAGQPNLLLSASRDKTL------ISWKLTG-------------DDQKFG 55
Query: 260 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
           +  PV+   GHS++V      +DG   ++ASWD+   L+DV TG   Q   GH
Sbjct: 56  V--PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGH 106

>pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
           ++ +GH   V D+A+        S+S D+T+RLW  +TG    ++ GH   V SV F P+
Sbjct: 70  KALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPD 129
Query: 215 KDLVLSASGDKSVHIW 230
              +LSA  ++ + +W
Sbjct: 130 NRQILSAGAEREIKLW 145

>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +RSF GH   V D  +        SAS D+T+RLW   TG+   ++ GH   V SV    
Sbjct: 58  VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK 117
Query: 214 NKDLVLSASGDKSVHIW 230
              +++S S DK++ +W
Sbjct: 118 KASMIISGSRDKTIKVW 134

>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 22/113 (19%)
Query: 201 GHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSIT 259
           GH+G V S+     + +L+LSAS DK++      I+W+                D+    
Sbjct: 15  GHNGWVTSLATSAGQPNLLLSASRDKTL------ISWKLTG-------------DDQKFG 55
Query: 260 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
           +  PV+   GHS++V      +DG   ++ASWD+   L+DV TG   Q   GH
Sbjct: 56  V--PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGH 106

>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 39/77 (50%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +RSF GH   V D  +        SAS D+T+RLW   TG+   ++ GH   V SV    
Sbjct: 58  VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVXSVDIDK 117
Query: 214 NKDLVLSASGDKSVHIW 230
               ++S S DK++ +W
Sbjct: 118 KASXIISGSRDKTIKVW 134

>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 22/113 (19%)
Query: 201 GHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSIT 259
           GH+G V S+     + +L+LSAS DK++      I+W+                D+    
Sbjct: 15  GHNGWVTSLATSAGQPNLLLSASRDKTL------ISWKLTG-------------DDQKFG 55
Query: 260 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
           +  PV+   GHS++V      +DG   ++ASWD+   L+DV TG   Q   GH
Sbjct: 56  V--PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGH 106

>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 22/116 (18%)
Query: 201 GHSGSVNSVRFLPN-KDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSIT 259
           GH+G V  +   P   D++LSAS DK++ +W+                      DE++  
Sbjct: 36  GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLT-------------------RDETNYG 76
Query: 260 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
           +  P + L GHS+ V      SDG+  ++ SWD    L+D+ TGT  +   GH ++
Sbjct: 77  I--PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD 130

>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 22/116 (18%)
Query: 201 GHSGSVNSVRFLPN-KDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSIT 259
           GH+G V  +   P   D++LSAS DK++ +W+                      DE++  
Sbjct: 13  GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLT-------------------RDETNYG 53
Query: 260 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
           +  P + L GHS+ V      SDG+  ++ SWD    L+D+ TGT  +   GH ++
Sbjct: 54  I--PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD 107

>pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 71/165 (43%), Gaps = 31/165 (18%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ-YSGHSGSVNSVRF 211
           K+  F  H D +  +AV P +P + S S D TV+LW+ +    + Q + GH   V  V F
Sbjct: 89  KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAF 148
Query: 212 LPNKDLVLSASG--DKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLG 269
            P KD    ASG  D++V +W                   S      + TL T      G
Sbjct: 149 NP-KDPSTFASGCLDRTVKVW-------------------SLGQSTPNFTLTT------G 182
Query: 270 HSNVVIAADW--LSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
               V   D+  L D   +ITAS D    ++D +T + + +L GH
Sbjct: 183 QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH 227

>pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 71/165 (43%), Gaps = 31/165 (18%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ-YSGHSGSVNSVRF 211
           K+  F  H D +  +AV P +P + S S D TV+LW+ +    + Q + GH   V  V F
Sbjct: 89  KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAF 148
Query: 212 LPNKDLVLSASG--DKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLG 269
            P KD    ASG  D++V +W                   S      + TL T      G
Sbjct: 149 NP-KDPSTFASGCLDRTVKVW-------------------SLGQSTPNFTLTT------G 182
Query: 270 HSNVVIAADW--LSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
               V   D+  L D   +ITAS D    ++D +T + + +L GH
Sbjct: 183 QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH 227

>pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 171 PGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
           P +P + +AS D T+++W  QT  CV    GH  +V+   F P   +++S S D ++ IW
Sbjct: 196 PDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIW 255
Query: 231 QA 232
            +
Sbjct: 256 NS 257

>pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 71/165 (43%), Gaps = 31/165 (18%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ-YSGHSGSVNSVRF 211
           K+  F  H D +  +AV P +P + S S D TV+LW+ +    + Q + GH   V  V F
Sbjct: 89  KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAF 148
Query: 212 LPNKDLVLSASG--DKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLG 269
            P KD    ASG  D++V +W                   S      + TL T      G
Sbjct: 149 NP-KDPSTFASGCLDRTVKVW-------------------SLGQSTPNFTLTT------G 182
Query: 270 HSNVVIAADW--LSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
               V   D+  L D   +ITAS D    ++D +T + + +L GH
Sbjct: 183 QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH 227

>pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 171 PGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
           P +P + +AS D T+++W  QT  CV    GH  +V+   F P   +++S S D ++ IW
Sbjct: 196 PDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIW 255
Query: 231 QA 232
            +
Sbjct: 256 NS 257

>pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 71/165 (43%), Gaps = 31/165 (18%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ-YSGHSGSVNSVRF 211
           K+  F  H D +  +AV P +P + S S D TV+LW+ +    + Q + GH   V  V F
Sbjct: 89  KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAF 148
Query: 212 LPNKDLVLSASG--DKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLG 269
            P KD    ASG  D++V +W                   S      + TL T      G
Sbjct: 149 NP-KDPSTFASGCLDRTVKVW-------------------SLGQSTPNFTLTT------G 182
Query: 270 HSNVVIAADW--LSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
               V   D+  L D   +ITAS D    ++D +T + + +L GH
Sbjct: 183 QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH 227

>pdb|3JZN|A Chain A, Structure Of Eed In Apo Form Length = 366

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/190 (20%), Positives = 79/190 (41%), Gaps = 37/190 (19%)
Query: 141 VSSFKTSLLSCY---KIRSFSGHRDG---------VWDVAVRPGQPVLGSASADRTVRLW 188
           V S + +L  C+   +IR    + D           W        P+L  A +   +R+ 
Sbjct: 41  VGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRII 100
Query: 189 STQTGKCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXX 247
           +  T +C+  Y GH  ++N ++F P + +L+LS S D ++ +W    +            
Sbjct: 101 NPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD------------ 148
Query: 248 XESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ 307
                      TL      + GH + V++AD+   GE++++   D    L+ + +  ++ 
Sbjct: 149 -----------TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMN 197
Query: 308 SLT-GHDEEP 316
           ++   +D  P
Sbjct: 198 AIKESYDYNP 207

>pdb|3IIW|A Chain A, Crystal Structure Of Eed In Complex With A Trimethylated Histone H3k27 Peptide Length = 365

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/190 (20%), Positives = 79/190 (41%), Gaps = 37/190 (19%)
Query: 141 VSSFKTSLLSCY---KIRSFSGHRDG---------VWDVAVRPGQPVLGSASADRTVRLW 188
           V S + +L  C+   +IR    + D           W        P+L  A +   +R+ 
Sbjct: 40  VGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRII 99
Query: 189 STQTGKCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXX 247
           +  T +C+  Y GH  ++N ++F P + +L+LS S D ++ +W    +            
Sbjct: 100 NPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD------------ 147
Query: 248 XESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ 307
                      TL      + GH + V++AD+   GE++++   D    L+ + +  ++ 
Sbjct: 148 -----------TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMN 196
Query: 308 SLT-GHDEEP 316
           ++   +D  P
Sbjct: 197 AIKESYDYNP 206

>pdb|3IIY|A Chain A, Crystal Structure Of Eed In Complex With A Trimethylated Histone H1k26 Peptide Length = 365

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/190 (20%), Positives = 79/190 (41%), Gaps = 37/190 (19%)
Query: 141 VSSFKTSLLSCY---KIRSFSGHRDG---------VWDVAVRPGQPVLGSASADRTVRLW 188
           V S + +L  C+   +IR    + D           W        P+L  A +   +R+ 
Sbjct: 40  VGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRII 99
Query: 189 STQTGKCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXX 247
           +  T +C+  Y GH  ++N ++F P + +L+LS S D ++ +W    +            
Sbjct: 100 NPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD------------ 147
Query: 248 XESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ 307
                      TL      + GH + V++AD+   GE++++   D    L+ + +  ++ 
Sbjct: 148 -----------TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMN 196
Query: 308 SLT-GHDEEP 316
           ++   +D  P
Sbjct: 197 AIKESYDYNP 206

>pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 26/171 (15%)
Query: 154 IRSFSGHRDGVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 211
           ++SF GH   V  + + P +      S   D+   +W  ++G+CV  +  H   VNSVR+
Sbjct: 189 LQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRY 248
Query: 212 LPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHS 271
            P+ D   S S D +  ++    + E                    + + +    + G S
Sbjct: 249 YPSGDAFASGSDDATCRLYDLRADRE--------------------VAIYSKESIIFGAS 288
Query: 272 NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
           +V    D+   G  +     D   N++DV  G+ +  L GH+     L VS
Sbjct: 289 SV----DFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVS 335

>pdb|3JPX|A Chain A, Eed: A Novel Histone Trimethyllysine Binder Within The Eed-Ezh2 Polycomb Complex Length = 402

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/190 (20%), Positives = 79/190 (41%), Gaps = 37/190 (19%)
Query: 141 VSSFKTSLLSCY---KIRSFSGHRDG---------VWDVAVRPGQPVLGSASADRTVRLW 188
           V S + +L  C+   +IR    + D           W        P+L  A +   +R+ 
Sbjct: 77  VGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRII 136
Query: 189 STQTGKCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXX 247
           +  T +C+  Y GH  ++N ++F P + +L+LS S D ++ +W    +            
Sbjct: 137 NPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD------------ 184
Query: 248 XESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ 307
                      TL      + GH + V++AD+   GE++++   D    L+ + +  ++ 
Sbjct: 185 -----------TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMN 233
Query: 308 SLT-GHDEEP 316
           ++   +D  P
Sbjct: 234 AIKESYDYNP 243

>pdb|2QXV|A Chain A, Structural Basis Of Ezh2 Recognition By Eed Length = 361

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/190 (20%), Positives = 79/190 (41%), Gaps = 37/190 (19%)
Query: 141 VSSFKTSLLSCY---KIRSFSGHRDG---------VWDVAVRPGQPVLGSASADRTVRLW 188
           V S + +L  C+   +IR    + D           W        P+L  A +   +R+ 
Sbjct: 36  VGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRII 95
Query: 189 STQTGKCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXX 247
           +  T +C+  Y GH  ++N ++F P + +L+LS S D ++ +W    +            
Sbjct: 96  NPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD------------ 143
Query: 248 XESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ 307
                      TL      + GH + V++AD+   GE++++   D    L+ + +  ++ 
Sbjct: 144 -----------TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMN 192
Query: 308 SLT-GHDEEP 316
           ++   +D  P
Sbjct: 193 AIKESYDYNP 202

>pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 78/191 (40%), Gaps = 35/191 (18%)
Query: 130 TNKLKVQTSKIVSSFKTSLLSCYKIR--------SFSGHRDGVWDVAVRPGQPVLGSASA 181
           TNK K  +  +V+     L+  +K R        S  GH+ GV  V +    P+  S+S 
Sbjct: 42  TNK-KENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSL 100
Query: 182 DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXX 241
           D  +RLW  + GK +           ++ F P+   + + +    V+I+           
Sbjct: 101 DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGV--------- 151
Query: 242 XXXXXXXESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 301
                     E  +   +L T  K        +++  +  DG+ + + + D + N+FD+ 
Sbjct: 152 ----------ESGKKEYSLDTRGK-------FILSIAYSPDGKYLASGAIDGIINIFDIA 194
Query: 302 TGTILQSLTGH 312
           TG +L +L GH
Sbjct: 195 TGKLLHTLEGH 205

>pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/71 (23%), Positives = 35/71 (49%)
Query: 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL 219
           H   V  +++ P   +  S + D + +LW  + G C   ++GH   +N++ F PN +   
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 220 SASGDKSVHIW 230
           + S D +  ++
Sbjct: 243 TGSDDATCRLF 253

>pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/71 (23%), Positives = 35/71 (49%)
Query: 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL 219
           H   V  +++ P   +  S + D + +LW  + G C   ++GH   +N++ F PN +   
Sbjct: 194 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 253
Query: 220 SASGDKSVHIW 230
           + S D +  ++
Sbjct: 254 TGSDDATCRLF 264

>pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/71 (23%), Positives = 35/71 (49%)
Query: 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL 219
           H   V  +++ P   +  S + D + +LW  + G C   ++GH   +N++ F PN +   
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 220 SASGDKSVHIW 230
           + S D +  ++
Sbjct: 243 TGSDDATCRLF 253

>pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/71 (23%), Positives = 35/71 (49%)
Query: 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL 219
           H   V  +++ P   +  S + D + +LW  + G C   ++GH   +N++ F PN +   
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 220 SASGDKSVHIW 230
           + S D +  ++
Sbjct: 243 TGSDDATCRLF 253

>pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/71 (23%), Positives = 35/71 (49%)
Query: 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL 219
           H   V  +++ P   +  S + D + +LW  + G C   ++GH   +N++ F PN +   
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 220 SASGDKSVHIW 230
           + S D +  ++
Sbjct: 243 TGSDDATCRLF 253

>pdb|3ODT|A Chain A, Crystal Structure Of Wd40 Beta Propeller Domain Of Doa1 Length = 313

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 154 IRSFSG-HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
           I++FSG H D V  +AV      + S S D  ++L    TG  +  Y GH   V  ++ L
Sbjct: 176 IKTFSGIHNDVVRHLAVVDDGHFI-SCSNDGLIKLVDXHTGDVLRTYEGHESFVYCIKLL 234
Query: 213 PNKDLVLSASGDKSVHIW 230
           PN D+V S   D++V IW
Sbjct: 235 PNGDIV-SCGEDRTVRIW 251

>pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 380

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 178 SASADRTVRLWSTQ-TGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
           S S D TVRLW  + T + V  Y GH G +NSV+F P+     + S D +  ++
Sbjct: 223 SGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLF 276

>pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 175 VLGSASADRTVRLWSTQTGKCVLQ-YSGHSGSVNSVRFLPNKDLVLSASG-DKSVHIW 230
           +L + SAD+TV LW  +  K  L  +  H   +  V++ P+ + +L++SG D+ +H+W
Sbjct: 292 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 349

>pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 175 VLGSASADRTVRLWSTQTGKCVLQ-YSGHSGSVNSVRFLPNKDLVLSASG-DKSVHIW 230
           +L + SAD+TV LW  +  K  L  +  H   +  V++ P+ + +L++SG D+ +H+W
Sbjct: 294 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 351

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	361
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	99.97
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	99.97
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.97
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	99.97
3ow8_A	321	WD repeat-containing protein 61; structural genomi	99.97
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.97
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	99.97
3ow8_A	321	WD repeat-containing protein 61; structural genomi	99.96
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.96
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.96
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.96
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.96
2pm7_B	297	Protein transport protein SEC13, protein transport	99.96
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	99.96
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.96
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	99.96
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.96
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.96
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.96
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	99.95
2pm7_B	297	Protein transport protein SEC13, protein transport	99.95
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.95
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.95
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.95
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.95
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.95
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.95
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.95
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.94
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.94
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.94
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.94
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.94
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.94
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.94
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.94
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.94
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.93
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.93
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.93
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.93
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.93
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.93
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.93
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.93
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.93
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.93
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.93
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.93
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.93
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.93
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.93
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.93
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.93
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.92
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.92
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.92
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.92
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.92
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.92
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.92
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.92
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.92
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.92
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.92
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.92
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.92
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.92
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.92
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.91
3jro_A	753	Fusion protein of protein transport protein SEC13	99.91
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.91
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.91
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.91
3jro_A	753	Fusion protein of protein transport protein SEC13	99.91
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.91
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.91
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.91
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.91
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.91
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.91
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.91
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.91
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.91
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.91
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.91
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.9
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.9
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.9
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.9
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.9
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.9
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.9
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.9
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.9
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.9
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.9
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.9
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.9
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.9
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.9
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.9
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.9
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.9
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.9
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.89
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.89
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.89
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.89
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.89
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.88
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.88
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.88
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.88
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.87
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.87
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.87
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.87
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.86
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.86
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.83
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.83
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.81
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.79
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.77
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.74
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.73
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.73
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.7
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.62
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.62
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.61
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.6
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.56
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.55
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.55
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.54
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.54
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.54
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.52
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.51
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.51
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.51
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.48
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.48
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.47
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.45
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.44
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.42
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.42
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.41
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.4
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.4
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.39
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.37
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.34
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.34
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.28
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.28
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.27
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.26
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.25
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.25
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.23
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.22
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.2
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.19
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.19
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.17
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.17
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.16
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.15
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.14
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.13
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.13
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.12
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.11
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.04
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.02
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.01
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	98.95
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	98.95
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	98.93
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	98.93
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	98.92
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	98.89
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	98.88
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	98.88
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	98.87
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	98.86
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	98.86
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	98.85
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	98.81
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	98.78
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	98.76
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	98.75
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	98.72
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	98.71
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	98.63
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	98.61
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	98.61
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	98.61
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	98.61
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	98.58
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	98.57
1uuj_A	88	Platelet-activating factor acetylhydrolase IB ALP	98.57
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	98.56
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	98.56
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	98.46
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	98.46
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	98.41
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	98.4
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	98.36
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	98.34
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	98.32
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	98.31
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	98.3
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	98.28
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	98.28
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	98.25
2qe8_A	343	Uncharacterized protein; structural genomics, join	98.19
2qe8_A	343	Uncharacterized protein; structural genomics, join	98.18
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	98.18
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	98.17
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.16
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	98.15
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	98.12
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.07
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	98.01
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	97.96
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	97.94
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	97.9
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	97.89
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	97.86
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	97.81
2ece_A	462	462AA long hypothetical selenium-binding protein;	97.79
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	97.74
2ece_A	462	462AA long hypothetical selenium-binding protein;	97.74
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	97.66
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	97.64
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	97.63
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	97.63
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	97.53
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	97.51
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	97.42
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	97.4
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	97.4
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	97.24
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	97.22
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	97.16
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	97.13
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	97.13
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	97.11
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	97.09
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	97.04
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	97.01
2p4o_A	306	Hypothetical protein; putative lactonase, structur	97.0
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	96.97
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	96.92
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	96.82
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	96.73
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	96.71
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	96.7
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	96.69
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	96.6
4a2l_A	795	BT_4663, two-component system sensor histidine kin	96.59
3v65_B	386	Low-density lipoprotein receptor-related protein;	96.45
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	96.35
4a2l_A	795	BT_4663, two-component system sensor histidine kin	96.21
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	96.2
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	96.16
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	96.02
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	95.96
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	95.93
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	95.91
3v65_B	386	Low-density lipoprotein receptor-related protein;	95.8
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	95.68
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	95.67
2p4o_A	306	Hypothetical protein; putative lactonase, structur	95.64
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	95.47
3v9f_A	781	Two-component system sensor histidine kinase/RESP	95.11
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	95.08
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	95.02
3v9f_A	781	Two-component system sensor histidine kinase/RESP	94.88
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	94.82
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	94.8
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	94.78
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	94.38
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	94.26
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	94.22
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	94.17
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	94.16
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	93.93
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	93.92
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	93.79
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	93.44
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	93.17
3kya_A	496	Putative phosphatase; structural genomics, joint c	92.64
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	92.5
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	92.45
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	91.97
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	91.79
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	91.29
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	91.2
3kya_A	496	Putative phosphatase; structural genomics, joint c	90.63
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	90.62
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	90.61
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	90.48
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	90.36
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	89.82
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	89.67
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	89.1
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	88.71
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	88.02
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	87.88
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	87.38
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	87.29
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	87.14
3f7f_A	729	Nucleoporin NUP120; nuclear pore complex, macromol	86.63
1dh3_A	55	Transcription factor CREB; protein-DNA complex, tr	85.46
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	85.29
2oxj_A	34	Hybrid alpha/beta peptide based on the GCN4-P1 Se	84.66
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	84.39
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	84.22
4fhn_B	1139	Nucleoporin NUP120; protein complex,structural pro	84.01
2dgc_A	63	Protein (GCN4); basic domain, leucine zipper, DNA	83.48
3m48_A	33	General control protein GCN4; leucine zipper, synt	83.46
1jnm_A	62	Proto-oncogene C-JUN; BZIP, protein-DNA complex, t	83.32
1t2k_D	61	Cyclic-AMP-dependent transcription factor ATF-2; p	82.69
1ci6_A	63	Transcription factor ATF-4; BZIP; 2.60A {Homo sapi	82.69
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	82.38
2wt7_A	63	Proto-oncogene protein C-FOS; transcription, trans	81.83
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	81.65
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	81.54
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	81.45
2xz2_A	66	CSTF-50, isoform B; RNA-binding protein, 3' END mR	80.42
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	80.17
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	80.07

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=1.2e-35  Score=271.90  Aligned_cols=305  Identities=19%  Similarity=0.199  Sum_probs=166.1

Q ss_pred             ccccc--cccccceeecccchhhhHHHhhcCCcCCcccCChhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhcc
Q psy8430          10 KSTKH--KRTASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLD   87 (361)
Q Consensus        10 ~~~~~--~~~~~~~~~~l~~~~~~~~~~~L~~e~~~~~~~~~~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~~   87 (361)
                      +||+|  ++++|+|++||.++++.+.++.|++|.+.. ++++..+.       +...++..+.+..++|+++.+++.+..
T Consensus         2 ~~~~~q~~~~~~~i~~~l~~~~~~~~~~~~~~e~~~~-~~~~~~~~-------~~~~~~~~w~~~~~l~~~~~~~~~~~~   73 (410)
T 1vyh_C            2 VLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELD-MNEELDKK-------YAGLLEKKWTSVIRLQKKVMELESKLN   73 (410)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHhCCC-CCcchhhh-------hhchhhhhhhheeeHHHHHHHHHHHHH
Confidence            57777  999999999999999999999999887622 22222222       344456667777778888877766544


Q ss_pred             ccccccccCCCCCCchhhhccccCcccccccccCCCccccce----------eeeeeeccceeEEeeecCccceeeeEEe
Q psy8430          88 RESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKT----------TNKLKVQTSKIVSSFKTSLLSCYKIRSF  157 (361)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l  157 (361)
                      ....+.....   +...... .....+.. ............          .....+..+..+..|..  .+++.++++
T Consensus        74 ~~~~~~~~~~---~~~~~~~-~~~~~~~~-~~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~--~~~~~~~~l  146 (410)
T 1vyh_C           74 EAKEEFTSGG---PLGQKRD-PKEWIPRP-PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY--ETGDFERTL  146 (410)
T ss_dssp             ----------------------CCCCCCS-SCSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEET--TTCCCCEEE
T ss_pred             HHHHHHhccC---CccccCC-ccccccCC-CceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC--CCCcEEEEE
Confidence            3322111000   0000000 00000000 000000000000          11122222333444433  456778899


Q ss_pred             eccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecccccc
Q psy8430         158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE  237 (361)
Q Consensus       158 ~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~  237 (361)
                      .+|.+.|++++|+|++.+|++|+.|++|++||+.+++++..+.+|...|.+++|+|+++.|++|+.|++|++||+.++  
T Consensus       147 ~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~--  224 (410)
T 1vyh_C          147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG--  224 (410)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC--
T ss_pred             eccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC--
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999766  


Q ss_pred             ccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCe
Q psy8430         238 CLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPH  317 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~  317 (361)
                                              .++..+.+|...|.++.|+|++.++++|+.|+.|++||++++++...+.+|...|.
T Consensus       225 ------------------------~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~  280 (410)
T 1vyh_C          225 ------------------------YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVE  280 (410)
T ss_dssp             ------------------------CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE
T ss_pred             ------------------------cEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEE
Confidence                                    25677889999999999999999999999999999999999999999999998888


Q ss_pred             EEEEEcC-----------------------CCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         318 ILCVSSY-----------------------YSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       318 ~~~~s~s-----------------------~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      ++.+++.                       .+..+.||.|++|  |+   +. ..++..+.||...|
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iw--d~---~~-~~~~~~~~~h~~~v  341 (410)
T 1vyh_C          281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW--DV---ST-GMCLMTLVGHDNWV  341 (410)
T ss_dssp             EEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEE--ET---TT-TEEEEEEECCSSCE
T ss_pred             EEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEE--EC---CC-CceEEEEECCCCcE
Confidence            7544431                       0012389999999  87   44 56788899998753

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=99.97  E-value=4.6e-29  Score=219.01  Aligned_cols=163  Identities=17%  Similarity=0.252  Sum_probs=145.7

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd  231 (361)
                      +..++|.+|.+.|++++|+|++++|++|+.||+|++||+.++..+..+..|..+|.+++|+|++++|++|+.|++|++||
T Consensus         4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd   83 (304)
T 2ynn_A            4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN   83 (304)
T ss_dssp             CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred             eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence            45678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC-eEEEEee
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG-TILQSLT  310 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~-~~~~~~~  310 (361)
                      +.++                          ..+..+.+|...|.+++|+|+++++++|+.|++|++||++++ .+...+.
T Consensus        84 ~~~~--------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~  137 (304)
T 2ynn_A           84 YNTG--------------------------EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE  137 (304)
T ss_dssp             TTTC--------------------------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEEC
T ss_pred             CCCC--------------------------cEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhc
Confidence            8766                          356788899999999999999999999999999999999987 5567888


Q ss_pred             cCCCCCeEEEEEcC----CCcccCCCeEEEEcCCCC
Q psy8430         311 GHDEEPHILCVSSY----YSKVSCDLFQRIQHLDCG  342 (361)
Q Consensus       311 ~h~~~v~~~~~s~s----~~~v~~dg~i~iW~~d~~  342 (361)
                      +|...|.++.+++.    ++..+.||.|++|  |++
T Consensus       138 ~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iw--d~~  171 (304)
T 2ynn_A          138 GHEHFVMCVAFNPKDPSTFASGCLDRTVKVW--SLG  171 (304)
T ss_dssp             CCCSCEEEEEECTTCTTEEEEEETTSEEEEE--ETT
T ss_pred             ccCCcEEEEEECCCCCCEEEEEeCCCeEEEE--ECC
Confidence            99999988655542    1123499999999  773

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=99.97  E-value=1.1e-28  Score=216.69  Aligned_cols=190  Identities=21%  Similarity=0.278  Sum_probs=161.1

Q ss_pred             eeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec
Q psy8430         134 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP  213 (361)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~  213 (361)
                      .+..+..+..|..  .++..++.+.+|..+|.+++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|
T Consensus        30 s~~~dg~v~lWd~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~  107 (304)
T 2ynn_A           30 TTLYSGRVELWNY--ETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHP  107 (304)
T ss_dssp             EEETTSEEEEEET--TTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS
T ss_pred             EEcCCCcEEEEEC--CCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcC
Confidence            3444555666654  45677889999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCC
Q psy8430         214 NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWD  292 (361)
Q Consensus       214 ~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d  292 (361)
                      ++.+|++|+.|++|++||+.++.                         .....+.+|...|.+++|+| ++.+|++|+.|
T Consensus       108 ~~~~l~sgs~D~~v~lWd~~~~~-------------------------~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D  162 (304)
T 2ynn_A          108 TKPYVLSGSDDLTVKLWNWENNW-------------------------ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD  162 (304)
T ss_dssp             SSSEEEEEETTSCEEEEEGGGTT-------------------------EEEEEECCCCSCEEEEEECTTCTTEEEEEETT
T ss_pred             CCCEEEEECCCCeEEEEECCCCc-------------------------chhhhhcccCCcEEEEEECCCCCCEEEEEeCC
Confidence            99999999999999999987542                         14566789999999999999 67899999999


Q ss_pred             CcEEEeeCCCCeEEEEeec-CCCCCeE----------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         293 RVANLFDVETGTILQSLTG-HDEEPHI----------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       293 ~~v~iwd~~~~~~~~~~~~-h~~~v~~----------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      ++|++||++++.....+.. |...+..          ++++++     .||.|+||  |+   +. ..++..+.||...|
T Consensus       163 ~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s-----~D~~i~iW--d~---~~-~~~~~~~~~h~~~v  231 (304)
T 2ynn_A          163 RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS-----DDLTIKIW--DY---QT-KSCVATLEGHMSNV  231 (304)
T ss_dssp             SEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEE-----TTSEEEEE--ET---TT-TEEEEEEECCSSCE
T ss_pred             CeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEc-----CCCeEEEE--eC---CC-CccceeeCCCCCCE
Confidence            9999999998877666653 4455544          567777     99999999  87   44 57789999998753

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.97  E-value=7.6e-29  Score=221.24  Aligned_cols=196  Identities=19%  Similarity=0.187  Sum_probs=155.5

Q ss_pred             eeeccceeEEeeecCcccee--eeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEE
Q psy8430         133 LKVQTSKIVSSFKTSLLSCY--KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR  210 (361)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~--~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~  210 (361)
                      +.+..+..+..|........  ....+.+|.+.|++++|+|+|++|++|+.|++|++||+.+++++..+.+|...|.+++
T Consensus        97 ~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~  176 (344)
T 4gqb_B           97 LVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVA  176 (344)
T ss_dssp             EEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred             EEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEE
Confidence            34455566677766554432  3344669999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCC-EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE--eCCCCcEEEEEEcC-CCCEE
Q psy8430         211 FLPNKD-LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL--LGHSNVVIAADWLS-DGEQV  286 (361)
Q Consensus       211 ~~~~~~-~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~-~~~~l  286 (361)
                      |+|++. +|++++.|++|++||++++.                          +...+  ..|...+.+++|+| ++.++
T Consensus       177 ~~~~~~~~l~s~s~D~~v~iwd~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~p~~~~~l  230 (344)
T 4gqb_B          177 ASPHKDSVFLSCSEDNRILLWDTRCPK--------------------------PASQIGCSAPGYLPTSLAWHPQQSEVF  230 (344)
T ss_dssp             ECSSCTTEEEEEETTSCEEEEETTSSS--------------------------CEEECC----CCCEEEEEECSSCTTEE
T ss_pred             ecCCCCCceeeeccccccccccccccc--------------------------eeeeeecceeeccceeeeecCCCCcce
Confidence            999874 78999999999999998763                          22332  34566799999999 46788


Q ss_pred             EEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCC---C-cccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         287 ITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYY---S-KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       287 ~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~---~-~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      ++|+.||.|++||+++++++.++.+|...|.++.+++..   + +.+.||+|+||  |.   +. .+ +..+.||++.|
T Consensus       231 ~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vw--d~---~~-~~-~~~~~~H~~~V  302 (344)
T 4gqb_B          231 VFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVL--DS---SL-SE-LFRSQAHRDFV  302 (344)
T ss_dssp             EEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEE--CT---TC-CE-EEEECCCSSCE
T ss_pred             EEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEE--EC---CC-Cc-EEEEcCCCCCE
Confidence            999999999999999999999999999999997776542   1 23589999999  77   33 22 34678998764

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=99.97  E-value=3.1e-29  Score=229.40  Aligned_cols=170  Identities=26%  Similarity=0.422  Sum_probs=153.2

Q ss_pred             eEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecc
Q psy8430         154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV  233 (361)
Q Consensus       154 ~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~  233 (361)
                      ...+.+|.++|++++|+|++.+|++|+.|++|++||+.+++....+.+|...|.+++|+|++++|++|+.|++|++||+.
T Consensus       101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~  180 (410)
T 1vyh_C          101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ  180 (410)
T ss_dssp             SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred             eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence            45678999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCC
Q psy8430         234 INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD  313 (361)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~  313 (361)
                      +.                          .++..+.+|...|.+++|+|++.++++|+.|++|++||++++.++.++.+|.
T Consensus       181 ~~--------------------------~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~  234 (410)
T 1vyh_C          181 GF--------------------------ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR  234 (410)
T ss_dssp             SS--------------------------CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred             CC--------------------------ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCC
Confidence            54                          2566678999999999999999999999999999999999999999999999


Q ss_pred             CCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430         314 EEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST  360 (361)
Q Consensus       314 ~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~  360 (361)
                      ..+.+        ++++++     .||.|++|  |+   +. ..++..+.+|...
T Consensus       235 ~~v~~~~~~~~g~~l~s~s-----~D~~v~vw--d~---~~-~~~~~~~~~h~~~  278 (410)
T 1vyh_C          235 EWVRMVRPNQDGTLIASCS-----NDQTVRVW--VV---AT-KECKAELREHRHV  278 (410)
T ss_dssp             SCEEEEEECTTSSEEEEEE-----TTSCEEEE--ET---TT-CCEEEEECCCSSC
T ss_pred             ccEEEEEECCCCCEEEEEc-----CCCeEEEE--EC---CC-CceeeEecCCCce
Confidence            98887        456666     99999999  77   33 4566778888754

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=99.97  E-value=2.3e-28  Score=216.29  Aligned_cols=199  Identities=21%  Similarity=0.284  Sum_probs=171.3

Q ss_pred             eeeeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEE
Q psy8430         131 NKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR  210 (361)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~  210 (361)
                      ....+..+..++.|............+.+|...|.+++|++++.++++|+.|++|++||+.+++.+..+..|...+.+++
T Consensus        50 ~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~  129 (321)
T 3ow8_A           50 TVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLA  129 (321)
T ss_dssp             EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEE
T ss_pred             EEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEE
Confidence            34556667778888877666777788999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe
Q psy8430         211 FLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS  290 (361)
Q Consensus       211 ~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~  290 (361)
                      |+|++++|++++.||.|++|++.++                          .....+..|...+.+++|+|+|++|++|+
T Consensus       130 ~spdg~~l~~g~~dg~v~i~~~~~~--------------------------~~~~~~~~~~~~v~~~~~spdg~~lasg~  183 (321)
T 3ow8_A          130 FSPDSQYLATGTHVGKVNIFGVESG--------------------------KKEYSLDTRGKFILSIAYSPDGKYLASGA  183 (321)
T ss_dssp             ECTTSSEEEEECTTSEEEEEETTTC--------------------------SEEEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred             ECCCCCEEEEEcCCCcEEEEEcCCC--------------------------ceeEEecCCCceEEEEEECCCCCEEEEEc
Confidence            9999999999999999999998765                          24566778889999999999999999999


Q ss_pred             CCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         291 WDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       291 ~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      .|+.|++||+++++++.++.+|...|.++.+++...   ..+.||.|+||  |+   +. ..++..+.+|.+.|
T Consensus       184 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iw--d~---~~-~~~~~~~~~h~~~v  251 (321)
T 3ow8_A          184 IDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY--DV---QH-ANLAGTLSGHASWV  251 (321)
T ss_dssp             TTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEE--ET---TT-CCEEEEECCCSSCE
T ss_pred             CCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEE--EC---CC-cceeEEEcCCCCce
Confidence            999999999999999999999999998844443311   12399999999  77   33 45678889998753

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.97  E-value=4.7e-28  Score=217.23  Aligned_cols=179  Identities=23%  Similarity=0.276  Sum_probs=155.4

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd  231 (361)
                      +..+++.+|.+.|++++|+|++.+|++|+.|++|++||..+++....+..|...|.+++|+|++..+++++.|+.+++|+
T Consensus        55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~  134 (354)
T 2pbi_B           55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP  134 (354)
T ss_dssp             CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred             EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence            34567889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG  311 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~  311 (361)
                      +.....                    .........+.+|...|.+++|+|++..|++++.|++|++||+++++++.++.+
T Consensus       135 ~~~~~~--------------------~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~  194 (354)
T 2pbi_B          135 LTFDKN--------------------ENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHG  194 (354)
T ss_dssp             CCCCTT--------------------CCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred             Eecccc--------------------ccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcC
Confidence            864311                    011134567778999999999999999999999999999999999999999999


Q ss_pred             CCCCCeEE----------EEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         312 HDEEPHIL----------CVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       312 h~~~v~~~----------~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      |...|.++          +++++     .||.|++|  |+   +. ..++..+.+|...|
T Consensus       195 h~~~v~~~~~~~~~~g~~l~sgs-----~Dg~v~~w--d~---~~-~~~~~~~~~h~~~v  243 (354)
T 2pbi_B          195 HGADVLCLDLAPSETGNTFVSGG-----CDKKAMVW--DM---RS-GQCVQAFETHESDV  243 (354)
T ss_dssp             CSSCEEEEEECCCSSCCEEEEEE-----TTSCEEEE--ET---TT-CCEEEEECCCSSCE
T ss_pred             CCCCeEEEEEEeCCCCCEEEEEe-----CCCeEEEE--EC---CC-CcEEEEecCCCCCe
Confidence            99888764          44555     99999999  87   44 45788899998753

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=99.97  E-value=5.1e-28  Score=215.77  Aligned_cols=181  Identities=22%  Similarity=0.293  Sum_probs=154.3

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd  231 (361)
                      +..+++.+|.+.|++++|+|++++|++|+.||+|++||+.+++.+..+..|...|.+++|+|+++++++++.|+.+++|+
T Consensus        46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~  125 (340)
T 1got_B           46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN  125 (340)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred             hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence            34567889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG  311 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~  311 (361)
                      +.+...                      .......+.+|.+.|.++.|++++. +++++.|+.|++||+++++++.++.+
T Consensus       126 ~~~~~~----------------------~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~  182 (340)
T 1got_B          126 LKTREG----------------------NVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTG  182 (340)
T ss_dssp             TTTCSB----------------------SCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECC
T ss_pred             CccCCC----------------------cceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcC
Confidence            865421                      1124567789999999999998764 89999999999999999999999999


Q ss_pred             CCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         312 HDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       312 h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      |...|.++.+++...   ..+.||.|++|  |+   +. ..++..|.+|...|
T Consensus       183 h~~~v~~~~~~~~~~~l~sg~~d~~v~~w--d~---~~-~~~~~~~~~h~~~v  229 (340)
T 1got_B          183 HTGDVMSLSLAPDTRLFVSGACDASAKLW--DV---RE-GMCRQTFTGHESDI  229 (340)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSCEEEE--ET---TT-CSEEEEECCCSSCE
T ss_pred             CCCceEEEEECCCCCEEEEEeCCCcEEEE--EC---CC-CeeEEEEcCCcCCE
Confidence            999998854443311   12399999999  87   44 45678889998653

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=99.96  E-value=3.9e-28  Score=214.78  Aligned_cols=181  Identities=19%  Similarity=0.267  Sum_probs=160.4

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEE
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  228 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~  228 (361)
                      .+++.+..+.+|...+.+++|+|++++|++|+.|+.|++||+.+++....+..|...|.+++|+|++++|++++.||.|+
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~  189 (321)
T 3ow8_A          110 ENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN  189 (321)
T ss_dssp             TTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             CCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEE
Confidence            45677888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEE
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS  308 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~  308 (361)
                      +||+.++                          ..+..+.+|..+|.+++|+|++++|++|+.|+.|++||++++.++.+
T Consensus       190 iwd~~~~--------------------------~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~  243 (321)
T 3ow8_A          190 IFDIATG--------------------------KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT  243 (321)
T ss_dssp             EEETTTT--------------------------EEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEE
T ss_pred             EEECCCC--------------------------cEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEE
Confidence            9999765                          25677889999999999999999999999999999999999999999


Q ss_pred             eecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         309 LTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       309 ~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      +.+|...|.++.++++..   +.+.||.|+||  |+   +. ..++..|.+|.+.|
T Consensus       244 ~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iw--d~---~~-~~~~~~~~~h~~~v  293 (321)
T 3ow8_A          244 LSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW--DV---GT-RTCVHTFFDHQDQV  293 (321)
T ss_dssp             ECCCSSCEEEEEECTTSSEEEEEETTSCEEEE--ET---TT-TEEEEEECCCSSCE
T ss_pred             EcCCCCceEEEEECCCCCEEEEEeCCCcEEEE--eC---CC-CEEEEEEcCCCCcE
Confidence            999999998854444311   12399999999  77   44 56788899998754

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.96  E-value=1e-27  Score=212.87  Aligned_cols=204  Identities=19%  Similarity=0.219  Sum_probs=153.9

Q ss_pred             eeeccceeEEeeecCccceeeeEEe-ec-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC-------CeEEEEEeCCC
Q psy8430         133 LKVQTSKIVSSFKTSLLSCYKIRSF-SG-HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-------GKCVLQYSGHS  203 (361)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~l-~~-h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~-------~~~~~~~~~h~  203 (361)
                      ..+..+..+..|.........+..+ .+ |.+.|++++|+|++.+|++|+.|++|++||+..       .+.+..+.+|.
T Consensus        28 as~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~  107 (330)
T 2hes_X           28 ATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHE  107 (330)
T ss_dssp             EEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC---
T ss_pred             EEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCC
Confidence            3445556666676655445566666 45 999999999999999999999999999999843       35677889999


Q ss_pred             CCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCC
Q psy8430         204 GSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG  283 (361)
Q Consensus       204 ~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  283 (361)
                      ..|.+++|+|++++|++|+.|++|++||++...                      ....++..+.+|...|.+++|+|++
T Consensus       108 ~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~----------------------~~~~~~~~~~~h~~~v~~v~~~p~~  165 (330)
T 2hes_X          108 NEVKGVAWSNDGYYLATCSRDKSVWIWETDESG----------------------EEYECISVLQEHSQDVKHVIWHPSE  165 (330)
T ss_dssp             -CEEEEEECTTSCEEEEEETTSCEEEEECCTTC----------------------CCCEEEEEECCCSSCEEEEEECSSS
T ss_pred             CcEEEEEECCCCCEEEEEeCCCEEEEEeccCCC----------------------CCeEEEEEeccCCCceEEEEECCCC
Confidence            999999999999999999999999999985321                      1113566788999999999999999


Q ss_pred             CEEEEEeCCCcEEEeeCCCC--eEEEEeecCCCCCeEEEEEcC--CC---cccCCCeEEEEcCCCCCCCC----cceeee
Q psy8430         284 EQVITASWDRVANLFDVETG--TILQSLTGHDEEPHILCVSSY--YS---KVSCDLFQRIQHLDCGTSEN----PIHSVC  352 (361)
Q Consensus       284 ~~l~s~~~d~~v~iwd~~~~--~~~~~~~~h~~~v~~~~~s~s--~~---~v~~dg~i~iW~~d~~~~~~----~~~~v~  352 (361)
                      .+|++|+.|++|++||..++  +++..+.+|...|.++.+++.  ..   ..+.|++|+||  |+.++..    ...++.
T Consensus       166 ~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw--~~~~~~~~~~~~~~~~~  243 (330)
T 2hes_X          166 ALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVW--KYMGDDEDDQQEWVCEA  243 (330)
T ss_dssp             SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEE--EEEEECTTSCEEEEEEE
T ss_pred             CEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEE--EecCCCccccceeEEee
Confidence            99999999999999999876  688899999999987554443  11   12399999999  6632211    114455


Q ss_pred             eecc-cccC
Q psy8430         353 VFQD-IQST  360 (361)
Q Consensus       353 ~~~~-h~~~  360 (361)
                      .+.+ |...
T Consensus       244 ~~~~~h~~~  252 (330)
T 2hes_X          244 ILPDVHKRQ  252 (330)
T ss_dssp             ECCSCCSSC
T ss_pred             ecccccccc
Confidence            5655 6553

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.96  E-value=2.6e-27  Score=209.33  Aligned_cols=192  Identities=23%  Similarity=0.322  Sum_probs=160.2

Q ss_pred             eeeccceeEEeeecCc---cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEE
Q psy8430         133 LKVQTSKIVSSFKTSL---LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV  209 (361)
Q Consensus       133 ~~~~~~~~~~~~~~~~---~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v  209 (361)
                      +.+..+..+..|....   ..+.+++.+.+|...|.+++|+|++.+|++|+.|++|++||+.+++.+..+.+|...|.++
T Consensus        34 ~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~  113 (319)
T 3frx_A           34 LSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSV  113 (319)
T ss_dssp             EEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEE
T ss_pred             EEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEE
Confidence            3445555566665432   2356788999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC------C
Q psy8430         210 RFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD------G  283 (361)
Q Consensus       210 ~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~  283 (361)
                      +|+|++.+|++++.|++|++||++..                           +...+.+|...|.++.|+|.      +
T Consensus       114 ~~~~~~~~l~s~s~D~~i~vwd~~~~---------------------------~~~~~~~h~~~v~~~~~~~~~~~~~~~  166 (319)
T 3frx_A          114 DIDKKASMIISGSRDKTIKVWTIKGQ---------------------------CLATLLGHNDWVSQVRVVPNEKADDDS  166 (319)
T ss_dssp             EECTTSCEEEEEETTSCEEEEETTSC---------------------------EEEEECCCSSCEEEEEECCC------C
T ss_pred             EEcCCCCEEEEEeCCCeEEEEECCCC---------------------------eEEEEeccCCcEEEEEEccCCCCCCCc
Confidence            99999999999999999999998643                           56778899999999999985      4


Q ss_pred             CEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeeeeccc
Q psy8430         284 EQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQDI  357 (361)
Q Consensus       284 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h  357 (361)
                      .++++++.|+.|++||++++++...+.+|...|.++.+++.+.   ..+.||.|+||  |+   +. ..++..+.+|
T Consensus       167 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iw--d~---~~-~~~~~~~~~~  237 (319)
T 3frx_A          167 VTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLW--NL---AA-KKAMYTLSAQ  237 (319)
T ss_dssp             CEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEE--ET---TT-TEEEEEEECC
T ss_pred             cEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEE--EC---CC-CcEEEEecCC
Confidence            5899999999999999999999999999999999855444322   12399999999  77   33 4455555554

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.96  E-value=1.1e-27  Score=211.63  Aligned_cols=174  Identities=24%  Similarity=0.348  Sum_probs=151.7

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCC-----CeEEEEEeCCCCCeEEEEEecCCCEEEEEEC
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQT-----GKCVLQYSGHSGSVNSVRFLPNKDLVLSASG  223 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~-~~l~s~s~d~~i~~wd~~~-----~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~  223 (361)
                      ...+..+|.+|.+.|++++|+|++ ++|++|+.|++|++|++..     +.++..+.+|...|.+++|+|++.+|++|+.
T Consensus         6 ~~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~   85 (319)
T 3frx_A            6 VLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW   85 (319)
T ss_dssp             EEEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred             EEEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeC
Confidence            346678899999999999999965 7999999999999999853     3567789999999999999999999999999


Q ss_pred             CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC
Q psy8430         224 DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  303 (361)
Q Consensus       224 d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~  303 (361)
                      |++|++||+.++                          .+...+.+|...|.+++|+|++.++++|+.|++|++||++ +
T Consensus        86 D~~v~~wd~~~~--------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~  138 (319)
T 3frx_A           86 DKTLRLWDVATG--------------------------ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-G  138 (319)
T ss_dssp             TSEEEEEETTTT--------------------------EEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-S
T ss_pred             CCEEEEEECCCC--------------------------CeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-C
Confidence            999999999766                          3567788999999999999999999999999999999997 6


Q ss_pred             eEEEEeecCCCCCeEE--------------EEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         304 TILQSLTGHDEEPHIL--------------CVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       304 ~~~~~~~~h~~~v~~~--------------~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      .++.++.+|...+.++              +++++     .|+.|++|  |+   +. ..+...+.+|...|
T Consensus       139 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~-----~d~~i~~w--d~---~~-~~~~~~~~~h~~~v  199 (319)
T 3frx_A          139 QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAG-----NDKMVKAW--NL---NQ-FQIEADFIGHNSNI  199 (319)
T ss_dssp             CEEEEECCCSSCEEEEEECCC------CCEEEEEE-----TTSCEEEE--ET---TT-TEEEEEECCCCSCE
T ss_pred             CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEe-----CCCEEEEE--EC---Cc-chhheeecCCCCcE
Confidence            7888898998888764              55566     99999999  77   44 56677888998753

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.96  E-value=1.2e-26  Score=208.09  Aligned_cols=173  Identities=18%  Similarity=0.267  Sum_probs=149.2

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec--CCCEEEEEECCCcEEE
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP--NKDLVLSASGDKSVHI  229 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~--~~~~l~s~~~d~~i~l  229 (361)
                      .....+.+|.+.|.+++|+|++..|++|+.|++|++||+.+++.+..+.+|...|.+++|+|  +++.|++|+.||+|++
T Consensus       145 ~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~  224 (354)
T 2pbi_B          145 AKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMV  224 (354)
T ss_dssp             GGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEE
T ss_pred             ccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEE
Confidence            34566778999999999999999999999999999999999999999999999999999988  4689999999999999


Q ss_pred             EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEe
Q psy8430         230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL  309 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~  309 (361)
                      ||++++                          .++..+.+|...|.+++|+|++.+|++|+.|++|++||+++++.+..+
T Consensus       225 wd~~~~--------------------------~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~  278 (354)
T 2pbi_B          225 WDMRSG--------------------------QCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIY  278 (354)
T ss_dssp             EETTTC--------------------------CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred             EECCCC--------------------------cEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence            999765                          256778899999999999999999999999999999999999888777


Q ss_pred             ecCC--CCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         310 TGHD--EEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       310 ~~h~--~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      ..+.  ..+.+        ++++++     .|+.|+||  |+   +. ..++..+.+|.+.|
T Consensus       279 ~~~~~~~~~~~~~~s~~g~~l~~g~-----~d~~i~vw--d~---~~-~~~~~~l~~h~~~v  329 (354)
T 2pbi_B          279 SKESIIFGASSVDFSLSGRLLFAGY-----NDYTINVW--DV---LK-GSRVSILFGHENRV  329 (354)
T ss_dssp             CCTTCCSCEEEEEECTTSSEEEEEE-----TTSCEEEE--ET---TT-CSEEEEECCCSSCE
T ss_pred             cCCCcccceeEEEEeCCCCEEEEEE-----CCCcEEEE--EC---CC-CceEEEEECCCCcE
Confidence            6443  23444        455556     89999999  87   33 45677888998754

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.96  E-value=1.8e-27  Score=208.17  Aligned_cols=177  Identities=16%  Similarity=0.202  Sum_probs=146.6

Q ss_pred             eEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC--CeEEEEEeCCCCCeEEEEEec--CCCEEEEEECCCcEEE
Q psy8430         154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT--GKCVLQYSGHSGSVNSVRFLP--NKDLVLSASGDKSVHI  229 (361)
Q Consensus       154 ~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~--~~~~~~~~~h~~~v~~v~~~~--~~~~l~s~~~d~~i~l  229 (361)
                      +..+.+|.+.|++++|+|+|++|++|+.|++|++||+..  ++.+.++.+|.+.|.+++|+|  ++++|++|+.|++|++
T Consensus         2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i   81 (297)
T 2pm7_B            2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI   81 (297)
T ss_dssp             CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred             ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence            345779999999999999999999999999999999974  367889999999999999986  3899999999999999


Q ss_pred             EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCcEEEeeCCCCeE--
Q psy8430         230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVETGTI--  305 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~~--  305 (361)
                      ||+.++..                        .....+.+|...|.+++|+|+  |.+|++++.|+.|++||++++..  
T Consensus        82 Wd~~~~~~------------------------~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~  137 (297)
T 2pm7_B           82 WKEENGRW------------------------SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS  137 (297)
T ss_dssp             EEBSSSCB------------------------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC
T ss_pred             EEcCCCce------------------------EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee
Confidence            99875421                        245567789999999999997  89999999999999999987632  


Q ss_pred             EEEeecCCCCCeEE---------------------EEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         306 LQSLTGHDEEPHIL---------------------CVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       306 ~~~~~~h~~~v~~~---------------------~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      ...+.+|...|.++                     +++++     .|+.|+||  |+.++.....++..|.||++.|
T Consensus       138 ~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs-----~D~~v~lw--d~~~~~~~~~~~~~l~~H~~~V  207 (297)
T 2pm7_B          138 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG-----ADNLVKIW--KYNSDAQTYVLESTLEGHSDWV  207 (297)
T ss_dssp             CEEEECCSSCEEEEEECCCC------------CCEEEEEE-----TTSCEEEE--EEETTTTEEEEEEEECCCSSCE
T ss_pred             eeeeecccCccceEeecCCcccccccCCCCCCcceEEEEc-----CCCcEEEE--EEcCCCceEEEEEEecCCCCce
Confidence            35667888777654                     55555     99999999  7754444344678899998754

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=99.96  E-value=2.3e-27  Score=211.98  Aligned_cols=182  Identities=23%  Similarity=0.342  Sum_probs=150.4

Q ss_pred             eeeeEEeeccCC-CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE--E-EeCCCCCeEEEEEecCCCEEEEEECCCc
Q psy8430         151 CYKIRSFSGHRD-GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL--Q-YSGHSGSVNSVRFLPNKDLVLSASGDKS  226 (361)
Q Consensus       151 ~~~~~~l~~h~~-~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~--~-~~~h~~~v~~v~~~~~~~~l~s~~~d~~  226 (361)
                      .+++.++.+|.+ .|++++|+|+|.+|++|+.|++|++||+.++....  . ..+|...|.+++|+|++++|++|+.|++
T Consensus         5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~   84 (345)
T 3fm0_A            5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDAT   84 (345)
T ss_dssp             EEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred             EEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCc
Confidence            467788999988 99999999999999999999999999998875432  2 3589999999999999999999999999


Q ss_pred             EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC---
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG---  303 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~---  303 (361)
                      +++||+..+.                        ..+...+.+|...|.+++|+|++++|++|+.|++|++||++++   
T Consensus        85 v~iw~~~~~~------------------------~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~  140 (345)
T 3fm0_A           85 TCIWKKNQDD------------------------FECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEY  140 (345)
T ss_dssp             EEEEEECCC-------------------------EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCE
T ss_pred             EEEEEccCCC------------------------eEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCe
Confidence            9999986431                        1256778899999999999999999999999999999999875   


Q ss_pred             eEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCc-ceeeeeecccccCC
Q psy8430         304 TILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENP-IHSVCVFQDIQSTG  361 (361)
Q Consensus       304 ~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~-~~~v~~~~~h~~~~  361 (361)
                      .++..+.+|...|.++.++++..   ..+.|+.|++|  |.   +.. ..++..+.+|.+.|
T Consensus       141 ~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w--~~---~~~~~~~~~~~~~h~~~v  197 (345)
T 3fm0_A          141 ECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLY--RE---EEDDWVCCATLEGHESTV  197 (345)
T ss_dssp             EEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEE--EE---ETTEEEEEEEECCCSSCE
T ss_pred             EEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEE--Ee---cCCCEEEEEEecCCCCce
Confidence            45677888999998855544421   12389999999  76   331 24667889998754

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.96  E-value=8.5e-27  Score=205.11  Aligned_cols=165  Identities=28%  Similarity=0.461  Sum_probs=146.9

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEE
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  230 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lw  230 (361)
                      ..+..++.+|.+.|++++|+|++++|++|+.|+.|++|++.+++....+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus        13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vw   92 (312)
T 4ery_A           13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW   92 (312)
T ss_dssp             CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEE
Confidence            35567888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430         231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~  310 (361)
                      |+.++                          .++..+.+|...|.+++|+|+++++++|+.|+.|++||+++++++..+.
T Consensus        93 d~~~~--------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~  146 (312)
T 4ery_A           93 DVSSG--------------------------KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP  146 (312)
T ss_dssp             ETTTC--------------------------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred             ECCCC--------------------------cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec
Confidence            98765                          2567788999999999999999999999999999999999999999999


Q ss_pred             cCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCC
Q psy8430         311 GHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGT  343 (361)
Q Consensus       311 ~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~  343 (361)
                      .|...+.++.++....   ..+.||.|++|  |+++
T Consensus       147 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~w--d~~~  180 (312)
T 4ery_A          147 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DTAS  180 (312)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSCEEEE--ETTT
T ss_pred             CCCCcEEEEEEcCCCCEEEEEeCCCcEEEE--ECCC
Confidence            9999988844443311   12399999999  7733

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=99.96  E-value=1.3e-26  Score=206.65  Aligned_cols=172  Identities=22%  Similarity=0.313  Sum_probs=149.8

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd  231 (361)
                      .....+.+|.+.|.++.|++++ .+++++.|++|++||+.+++.+..+.+|.+.|.+++|+|++.++++|+.|+.|++||
T Consensus       134 ~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd  212 (340)
T 1got_B          134 RVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWD  212 (340)
T ss_dssp             EEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             eeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEE
Confidence            5677889999999999999887 589999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG  311 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~  311 (361)
                      ++++                          .+...+.+|...|.+++|+|++.+|++|+.|++|++||+++++.+..+..
T Consensus       213 ~~~~--------------------------~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~  266 (340)
T 1got_B          213 VREG--------------------------MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH  266 (340)
T ss_dssp             TTTC--------------------------SEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred             CCCC--------------------------eeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEcc
Confidence            8765                          25677889999999999999999999999999999999999988877753


Q ss_pred             C--CCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         312 H--DEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       312 h--~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      +  ...+.+        ++++++     .||.|++|  |.   +. ..++..+.||.+.|
T Consensus       267 ~~~~~~v~~~~~s~~g~~l~~g~-----~d~~i~vw--d~---~~-~~~~~~~~~h~~~v  315 (340)
T 1got_B          267 DNIICGITSVSFSKSGRLLLAGY-----DDFNCNVW--DA---LK-ADRAGVLAGHDNRV  315 (340)
T ss_dssp             TTCCSCEEEEEECTTSSEEEEEE-----TTSEEEEE--ET---TT-CCEEEEEECCSSCE
T ss_pred             CCcccceEEEEECCCCCEEEEEC-----CCCeEEEE--Ec---cc-CcEeeEeecCCCcE
Confidence            2  235665        455555     99999999  77   33 45678899998754

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.96  E-value=3.3e-26  Score=201.32  Aligned_cols=185  Identities=26%  Similarity=0.450  Sum_probs=157.3

Q ss_pred             ccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCC
Q psy8430         136 QTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK  215 (361)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~  215 (361)
                      ..+..+..|..  .+++....+.+|...|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++
T Consensus        42 ~~dg~i~iw~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~  119 (312)
T 4ery_A           42 SADKLIKIWGA--YDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS  119 (312)
T ss_dssp             ETTSCEEEEET--TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS
T ss_pred             eCCCeEEEEeC--CCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC
Confidence            33444444443  3456778899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcE
Q psy8430         216 DLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVA  295 (361)
Q Consensus       216 ~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v  295 (361)
                      ++|++++.|+.|++||++++                          .....+..|...|.+++|+|++.++++++.|+.|
T Consensus       120 ~~l~s~~~d~~i~iwd~~~~--------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  173 (312)
T 4ery_A          120 NLIVSGSFDESVRIWDVKTG--------------------------KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC  173 (312)
T ss_dssp             SEEEEEETTSCEEEEETTTC--------------------------CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             CEEEEEeCCCcEEEEECCCC--------------------------EEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence            99999999999999998765                          2566778899999999999999999999999999


Q ss_pred             EEeeCCCCeEEEEeec-CCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeeccccc
Q psy8430         296 NLFDVETGTILQSLTG-HDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQS  359 (361)
Q Consensus       296 ~iwd~~~~~~~~~~~~-h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~  359 (361)
                      ++||+++++++..+.. +...+..        ++++++     .||.|++|  |+   +. ..++..+.+|..
T Consensus       174 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~d~~i~iw--d~---~~-~~~~~~~~~~~~  235 (312)
T 4ery_A          174 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-----LDNTLKLW--DY---SK-GKCLKTYTGHKN  235 (312)
T ss_dssp             EEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEE-----TTTEEEEE--ET---TT-TEEEEEECSSCC
T ss_pred             EEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEc-----CCCeEEEE--EC---CC-CcEEEEEEecCC
Confidence            9999999998887754 4555665        445555     89999999  77   44 456777888765

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.96  E-value=5.3e-27  Score=208.30  Aligned_cols=185  Identities=21%  Similarity=0.286  Sum_probs=143.3

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--eEEEEE-eC-CCCCeEEEEEecCCCEEEEEECCCc
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQY-SG-HSGSVNSVRFLPNKDLVLSASGDKS  226 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~--~~~~~~-~~-h~~~v~~v~~~~~~~~l~s~~~d~~  226 (361)
                      .++++++.+|.++|++++|+|+  +|++|+.|++|++||+..+  ..+..+ .+ |...|.+++|+|++++|++++.|++
T Consensus         4 ~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~   81 (330)
T 2hes_X            4 INLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDST   81 (330)
T ss_dssp             CEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred             cccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCc
Confidence            4567889999999999999988  9999999999999999875  455556 34 9999999999999999999999999


Q ss_pred             EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC----
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET----  302 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~----  302 (361)
                      |++||+......                   .....+...+.+|...|.+++|+|+|++|++|+.|++|++||++.    
T Consensus        82 v~iw~~~~~~~~-------------------~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~  142 (330)
T 2hes_X           82 VSIWAKEESADR-------------------TFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEE  142 (330)
T ss_dssp             EEEEEC--------------------------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCC
T ss_pred             EEEEEcccCcCc-------------------cccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCC
Confidence            999998532100                   001135667889999999999999999999999999999999943    


Q ss_pred             CeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCC-cceeeeeecccccCC
Q psy8430         303 GTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSEN-PIHSVCVFQDIQSTG  361 (361)
Q Consensus       303 ~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~-~~~~v~~~~~h~~~~  361 (361)
                      .+++..+.+|...|.++.++++..   ..+.|+.|+||  |.   +. ...++..+.||.+.|
T Consensus       143 ~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW--~~---~~~~~~~~~~~~~h~~~v  200 (330)
T 2hes_X          143 YECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIW--KD---YDDDWECVAVLNGHEGTV  200 (330)
T ss_dssp             CEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEE--EE---ETTEEEEEEEECCCSSCE
T ss_pred             eEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEE--EC---CCCCeeEEEEccCCCCcE
Confidence            367788999999998844433311   12399999999  76   32 136788999998754

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.96  E-value=5.5e-28  Score=218.89  Aligned_cols=182  Identities=22%  Similarity=0.289  Sum_probs=154.2

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEE
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  230 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lw  230 (361)
                      ..+.++|.+|.+.|++++|+|++++|++|+.|++|++||+.+++....+.+|...|.+++|+|++++|++|+.|+.+++|
T Consensus        56 ~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw  135 (380)
T 3iz6_a           56 LVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIF  135 (380)
T ss_dssp             CEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEE
T ss_pred             eEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEE
Confidence            35567899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEeeCCCCeEEEEe
Q psy8430         231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD-GEQVITASWDRVANLFDVETGTILQSL  309 (361)
Q Consensus       231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~  309 (361)
                      |+.+....                   .........+.+|.+.+.++.|+|+ +..|++|+.|++|++||+++++++..+
T Consensus       136 ~~~~~~~~-------------------~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~  196 (380)
T 3iz6_a          136 NLSSQADR-------------------DGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIF  196 (380)
T ss_dssp             ECCCCSSC-------------------CCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEE
T ss_pred             ECCCCccc-------------------cCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEe
Confidence            98653210                   0011234557789999999999996 457999999999999999999998877


Q ss_pred             -----ecCCCCCeE---------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         310 -----TGHDEEPHI---------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       310 -----~~h~~~v~~---------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                           .+|...+.+         ++++++     .||.|++|  |+   +....++..+.||.+.|
T Consensus       197 ~~~~~~~h~~~v~~~~~~~~~~~~l~sgs-----~D~~v~~w--d~---~~~~~~~~~~~~h~~~v  252 (380)
T 3iz6_a          197 GSEFPSGHTADVLSLSINSLNANMFISGS-----CDTTVRLW--DL---RITSRAVRTYHGHEGDI  252 (380)
T ss_dssp             CCCSSSSCCSCEEEEEECSSSCCEEEEEE-----TTSCEEEE--ET---TTTCCCCEEECCCSSCC
T ss_pred             ecccCCCCccCeEEEEeecCCCCEEEEEE-----CCCeEEEE--EC---CCCCcceEEECCcCCCe
Confidence                 567777766         556666     99999999  88   54446678899998765

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=99.95  E-value=1.4e-26  Score=206.82  Aligned_cols=183  Identities=27%  Similarity=0.330  Sum_probs=148.4

Q ss_pred             eeccceeEEeeecCccceeeeEE-eeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--eEEEEEeCCCCCeEEEE
Q psy8430         134 KVQTSKIVSSFKTSLLSCYKIRS-FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVNSVR  210 (361)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~-l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~--~~~~~~~~h~~~v~~v~  210 (361)
                      .+..+..+..|............ ..+|.+.|.+++|+|+|++|++|+.|++|++||+..+  +++..+.+|...|.+++
T Consensus        33 s~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~  112 (345)
T 3fm0_A           33 SCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVA  112 (345)
T ss_dssp             EEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEE
T ss_pred             EEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEE
Confidence            34445556666554443333333 3689999999999999999999999999999999876  46788899999999999


Q ss_pred             EecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe
Q psy8430         211 FLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS  290 (361)
Q Consensus       211 ~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~  290 (361)
                      |+|++++|++|+.|++|++||+..+..                       ..++..+.+|...|.+++|+|++.+|++++
T Consensus       113 ~sp~~~~l~s~s~D~~v~iwd~~~~~~-----------------------~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s  169 (345)
T 3fm0_A          113 WAPSGNLLATCSRDKSVWVWEVDEEDE-----------------------YECVSVLNSHTQDVKHVVWHPSQELLASAS  169 (345)
T ss_dssp             ECTTSSEEEEEETTSCEEEEEECTTSC-----------------------EEEEEEECCCCSCEEEEEECSSSSCEEEEE
T ss_pred             EeCCCCEEEEEECCCeEEEEECCCCCC-----------------------eEEEEEecCcCCCeEEEEECCCCCEEEEEe
Confidence            999999999999999999999875421                       124567788999999999999999999999


Q ss_pred             CCCcEEEeeCCCCe--EEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCC
Q psy8430         291 WDRVANLFDVETGT--ILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDC  341 (361)
Q Consensus       291 ~d~~v~iwd~~~~~--~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~  341 (361)
                      .|+.|++||.+++.  +..++.+|...|.++.+++++.   ..+.||.|+||  |.
T Consensus       170 ~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW--~~  223 (345)
T 3fm0_A          170 YDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIW--RQ  223 (345)
T ss_dssp             TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE--EE
T ss_pred             CCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEe--cc
Confidence            99999999998875  5578899999999855544422   22499999999  64

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.95  E-value=2e-26  Score=201.53  Aligned_cols=185  Identities=24%  Similarity=0.299  Sum_probs=152.7

Q ss_pred             eeeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCe--EEEEEeCCCCCeE
Q psy8430         132 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVN  207 (361)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~--~~~~l~s~s~d~~i~~wd~~~~~--~~~~~~~h~~~v~  207 (361)
                      ...+..+..+..|.......+++.++.+|.++|++++|+|  ++.+|++|+.|++|++||+.+++  .+..+.+|...|.
T Consensus        24 las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~  103 (297)
T 2pm7_B           24 MATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVN  103 (297)
T ss_dssp             EEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEE
T ss_pred             EEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCcee
Confidence            3445666777778776666678899999999999999986  38899999999999999998873  5667888999999


Q ss_pred             EEEEecC--CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC---
Q psy8430         208 SVRFLPN--KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD---  282 (361)
Q Consensus       208 ~v~~~~~--~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---  282 (361)
                      +++|+|+  +.+|++++.|++|++||++.+..                        .....+.+|...|.+++|+|+   
T Consensus       104 ~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~------------------------~~~~~~~~h~~~v~~~~~~p~~~~  159 (297)
T 2pm7_B          104 SVQWAPHEYGPMLLVASSDGKVSVVEFKENGT------------------------TSPIIIDAHAIGVNSASWAPATIE  159 (297)
T ss_dssp             EEEECCGGGCSEEEEEETTSEEEEEEBCSSSC------------------------BCCEEEECCSSCEEEEEECCCC--
T ss_pred             EEEeCcCCCCcEEEEEECCCcEEEEEecCCCc------------------------eeeeeeecccCccceEeecCCccc
Confidence            9999997  88999999999999999875411                        123567789999999999997   


Q ss_pred             ----------CCEEEEEeCCCcEEEeeCCCCe----EEEEeecCCCCCeEEEEEcCC------CcccCCCeEEEEcCCCC
Q psy8430         283 ----------GEQVITASWDRVANLFDVETGT----ILQSLTGHDEEPHILCVSSYY------SKVSCDLFQRIQHLDCG  342 (361)
Q Consensus       283 ----------~~~l~s~~~d~~v~iwd~~~~~----~~~~~~~h~~~v~~~~~s~s~------~~v~~dg~i~iW~~d~~  342 (361)
                                +++|++|+.|++|++||++++.    +..++.+|...|.++.+++..      ++.+.|++|+||  |+.
T Consensus       160 ~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iW--d~~  237 (297)
T 2pm7_B          160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIW--TQD  237 (297)
T ss_dssp             ----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEE--EES
T ss_pred             ccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEE--EeC
Confidence                      5799999999999999998765    677889999998876665531      123499999999  663

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.95  E-value=8e-27  Score=209.40  Aligned_cols=193  Identities=17%  Similarity=0.163  Sum_probs=149.3

Q ss_pred             ceeEEeeecCccceeee--EEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCC
Q psy8430         138 SKIVSSFKTSLLSCYKI--RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK  215 (361)
Q Consensus       138 ~~~~~~~~~~~~~~~~~--~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~  215 (361)
                      +..+..|.........+  ....+|.+.|++++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++
T Consensus       114 dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~  193 (357)
T 4g56_B          114 SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGK  193 (357)
T ss_dssp             TSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTC
T ss_pred             CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCC
Confidence            33455555443333222  3345899999999999999999999999999999999999999999999999999999987


Q ss_pred             C-EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC-CCEEEEEeCCC
Q psy8430         216 D-LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD-GEQVITASWDR  293 (361)
Q Consensus       216 ~-~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~  293 (361)
                      . ++++++.||+|++||++++...                        .......|...+.+++|+|+ +.++++|+.|+
T Consensus       194 ~~~~~s~~~dg~v~~wd~~~~~~~------------------------~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~  249 (357)
T 4g56_B          194 DTIFLSCGEDGRILLWDTRKPKPA------------------------TRIDFCASDTIPTSVTWHPEKDDTFACGDETG  249 (357)
T ss_dssp             SSCEEEEETTSCEEECCTTSSSCB------------------------CBCCCTTCCSCEEEEEECTTSTTEEEEEESSS
T ss_pred             CceeeeeccCCceEEEECCCCcee------------------------eeeeeccccccccchhhhhcccceEEEeeccc
Confidence            5 7899999999999999876332                        11223456778999999997 56889999999


Q ss_pred             cEEEeeCCCCeEEEEeecCCCCCeEEEEEcCC---C-cccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         294 VANLFDVETGTILQSLTGHDEEPHILCVSSYY---S-KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       294 ~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~---~-~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      .|++||+++++++.++.+|...|.++.+++.+   + ..+.||+|+||  |+.+    .+++. +.+|++.|
T Consensus       250 ~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iw--d~~~----~~~~~-~~~H~~~V  314 (357)
T 4g56_B          250 NVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVL--DADF----SEVFR-DLSHRDFV  314 (357)
T ss_dssp             CEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEE--CTTS----CEEEE-ECCCSSCE
T ss_pred             ceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEE--ECCC----CcEeE-ECCCCCCE
Confidence            99999999999999999999999987666542   1 23589999999  7733    33343 34787654

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.95  E-value=4.9e-26  Score=206.98  Aligned_cols=194  Identities=22%  Similarity=0.358  Sum_probs=154.0

Q ss_pred             eccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec-
Q psy8430         135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP-  213 (361)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~-  213 (361)
                      +..+..+..|..  .+++.+..+.+|.+.|++++|+|++.+|++|+.|++|++||+.++++...+. +...|.+++|+| 
T Consensus       141 ~~~d~~i~iwd~--~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~  217 (393)
T 1erj_A          141 GAEDRLIRIWDI--ENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPG  217 (393)
T ss_dssp             EETTSCEEEEET--TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECST
T ss_pred             EcCCCeEEEEEC--CCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECC
Confidence            334444555554  4557788899999999999999999999999999999999999999888877 678899999999 


Q ss_pred             CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC
Q psy8430         214 NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR  293 (361)
Q Consensus       214 ~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~  293 (361)
                      ++.+|++++.|+.|++||+.++..+..                   .........+|...|.+++|+|+|++|++|+.|+
T Consensus       218 ~~~~l~~~s~d~~v~iwd~~~~~~~~~-------------------~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~  278 (393)
T 1erj_A          218 DGKYIAAGSLDRAVRVWDSETGFLVER-------------------LDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR  278 (393)
T ss_dssp             TCCEEEEEETTSCEEEEETTTCCEEEE-------------------EC------CCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             CCCEEEEEcCCCcEEEEECCCCcEEEe-------------------ecccccCCCCCCCCEEEEEECCCCCEEEEEeCCC
Confidence            899999999999999999976632110                   0011122357999999999999999999999999


Q ss_pred             cEEEeeCCC------------CeEEEEeecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeee
Q psy8430         294 VANLFDVET------------GTILQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCV  353 (361)
Q Consensus       294 ~v~iwd~~~------------~~~~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~  353 (361)
                      .|++||+++            +.+..++.+|...|.+        ++++++     .||.|++|  |.   +. ..++..
T Consensus       279 ~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs-----~D~~v~iw--d~---~~-~~~~~~  347 (393)
T 1erj_A          279 SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGS-----KDRGVLFW--DK---KS-GNPLLM  347 (393)
T ss_dssp             EEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEE-----TTSEEEEE--ET---TT-CCEEEE
T ss_pred             EEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEe-----CCCeEEEE--EC---CC-CeEEEE
Confidence            999999975            3466788899998887        455566     99999999  87   33 456788


Q ss_pred             ecccccCC
Q psy8430         354 FQDIQSTG  361 (361)
Q Consensus       354 ~~~h~~~~  361 (361)
                      +.||.+.|
T Consensus       348 l~~h~~~v  355 (393)
T 1erj_A          348 LQGHRNSV  355 (393)
T ss_dssp             EECCSSCE
T ss_pred             ECCCCCCE
Confidence            99998753

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.95  E-value=8.4e-27  Score=208.03  Aligned_cols=166  Identities=16%  Similarity=0.136  Sum_probs=138.4

Q ss_pred             eccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEE----EeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecc
Q psy8430         158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ----YSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV  233 (361)
Q Consensus       158 ~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~----~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~  233 (361)
                      ..|...|.+++|+|++ .|++|+.||+|++||+.+++.+..    ..+|.+.|.+++|+|++++|++|+.|++|++||+.
T Consensus        79 ~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~  157 (344)
T 4gqb_B           79 VQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA  157 (344)
T ss_dssp             EEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             eccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence            3567889999999986 788999999999999998865433    45899999999999999999999999999999997


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEeeCCCCeEEEEeec-
Q psy8430         234 INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITASWDRVANLFDVETGTILQSLTG-  311 (361)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~-  311 (361)
                      ++                          .++..+.+|...|++++|+|++. ++++++.|++|++||++++++...+.. 
T Consensus       158 ~~--------------------------~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~  211 (344)
T 4gqb_B          158 QQ--------------------------VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCS  211 (344)
T ss_dssp             TT--------------------------EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC--
T ss_pred             CC--------------------------cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecc
Confidence            66                          36778899999999999999885 789999999999999999999888753 


Q ss_pred             -CCCCCeE---------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         312 -HDEEPHI---------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       312 -h~~~v~~---------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                       |...+.+         ++++++     .||.|+||  |+   +. ..++..|.+|...|
T Consensus       212 ~~~~~~~~~~~~p~~~~~l~sg~-----~dg~v~~w--d~---~~-~~~~~~~~~h~~~v  260 (344)
T 4gqb_B          212 APGYLPTSLAWHPQQSEVFVFGD-----ENGTVSLV--DT---KS-TSCVLSSAVHSQCV  260 (344)
T ss_dssp             --CCCEEEEEECSSCTTEEEEEE-----TTSEEEEE--ES---CC---CCEEEECCSSCE
T ss_pred             eeeccceeeeecCCCCcceEEec-----cCCcEEEE--EC---CC-CcEEEEEcCCCCCE
Confidence             4445555         445555     99999999  88   44 56688899998754

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.95  E-value=3.1e-26  Score=207.35  Aligned_cols=172  Identities=25%  Similarity=0.353  Sum_probs=138.9

Q ss_pred             eEEeeccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCeEEEEE-----eCCCCCeEEEEEec-CCCEEEEEECCCc
Q psy8430         154 IRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQY-----SGHSGSVNSVRFLP-NKDLVLSASGDKS  226 (361)
Q Consensus       154 ~~~l~~h~~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~~~~~~~~-----~~h~~~v~~v~~~~-~~~~l~s~~~d~~  226 (361)
                      .+.+.+|.+.|.++.|.|+ +..|++|+.|++|++||+.+++.+..+     .+|...|.+++|+| ++++|++|+.|++
T Consensus       150 ~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~  229 (380)
T 3iz6_a          150 SRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTT  229 (380)
T ss_dssp             CCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSC
T ss_pred             eeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCe
Confidence            3456678888888888875 346888999999999999998888777     57999999999987 7899999999999


Q ss_pred             EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEE
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  306 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~  306 (361)
                      |++||++...                         .++..+.+|...|.+++|+|++.+|++|+.|++|++||+++++++
T Consensus       230 v~~wd~~~~~-------------------------~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~  284 (380)
T 3iz6_a          230 VRLWDLRITS-------------------------RAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQL  284 (380)
T ss_dssp             EEEEETTTTC-------------------------CCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEE
T ss_pred             EEEEECCCCC-------------------------cceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEE
Confidence            9999986431                         256788899999999999999999999999999999999999999


Q ss_pred             EEeecCCC-------CCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeee----cccccCC
Q psy8430         307 QSLTGHDE-------EPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVF----QDIQSTG  361 (361)
Q Consensus       307 ~~~~~h~~-------~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~----~~h~~~~  361 (361)
                      ..+..+..       .+.+        ++++++     .||.|++|  |..++    .++..+    .+|.+.|
T Consensus       285 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~-----~dg~i~vw--d~~~~----~~~~~~~~~~~~h~~~v  347 (380)
T 3iz6_a          285 QVYNREPDRNDNELPIVTSVAFSISGRLLFAGY-----SNGDCYVW--DTLLA----EMVLNLGTLQNSHEGRI  347 (380)
T ss_dssp             EEECCCCSSSCCSSCSCSEEEECSSSSEEEEEC-----TTSCEEEE--ETTTC----CEEEEECCSCSSCCCCC
T ss_pred             EEecccccccccccCceEEEEECCCCCEEEEEE-----CCCCEEEE--ECCCC----ceEEEEecccCCCCCce
Confidence            88865432       2555        455555     99999999  77332    233333    6787654

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.95  E-value=8e-26  Score=201.77  Aligned_cols=177  Identities=23%  Similarity=0.310  Sum_probs=144.1

Q ss_pred             eeeeEEeeccCCCeEEEEE-----cC-CCCEEEEEeCCCcEEEEeCCC-------CeEEEEEeCCCCCeEEEEEecCCCE
Q psy8430         151 CYKIRSFSGHRDGVWDVAV-----RP-GQPVLGSASADRTVRLWSTQT-------GKCVLQYSGHSGSVNSVRFLPNKDL  217 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~-----~~-~~~~l~s~s~d~~i~~wd~~~-------~~~~~~~~~h~~~v~~v~~~~~~~~  217 (361)
                      ..+..+|.+|.+.|++++|     ++ ++.+|++|+.|++|++||+..       +.+...+.+|...|.+++|+|++.+
T Consensus        11 ~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~   90 (343)
T 2xzm_R           11 VVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF   90 (343)
T ss_dssp             EEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE
T ss_pred             eeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE
Confidence            3567789999999999999     77 899999999999999999864       3567788999999999999999999


Q ss_pred             EEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy8430         218 VLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANL  297 (361)
Q Consensus       218 l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~i  297 (361)
                      +++++.|++|++||++++                          .....+.+|...|.+++|+|++++|++++.|+.|++
T Consensus        91 l~s~s~D~~v~lwd~~~~--------------------------~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~  144 (343)
T 2xzm_R           91 AISSSWDKTLRLWDLRTG--------------------------TTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKL  144 (343)
T ss_dssp             EEEEETTSEEEEEETTSS--------------------------CEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEE
T ss_pred             EEEEcCCCcEEEEECCCC--------------------------cEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEE
Confidence            999999999999999765                          256778899999999999999999999999999999


Q ss_pred             eeCCCCeEEEEee---cCCCCCeEEEEEcCC-------------CcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         298 FDVETGTILQSLT---GHDEEPHILCVSSYY-------------SKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       298 wd~~~~~~~~~~~---~h~~~v~~~~~s~s~-------------~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      ||+.. .+.....   +|...+.++.+++..             ...+.||.|++|  |.   +  ......+.+|...|
T Consensus       145 wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iw--d~---~--~~~~~~~~~h~~~v  216 (343)
T 2xzm_R          145 WNILG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVW--NT---N--FQIRYTFKAHESNV  216 (343)
T ss_dssp             EESSS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEE--ET---T--TEEEEEEECCSSCE
T ss_pred             EeccC-CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEE--cC---C--CceeEEEcCccccc
Confidence            99984 4444333   566666664433221             112399999999  64   2  34567788887653

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.95  E-value=2e-25  Score=199.20  Aligned_cols=183  Identities=22%  Similarity=0.288  Sum_probs=149.5

Q ss_pred             eeeeccceeEEeeecCcc-----ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCe
Q psy8430         132 KLKVQTSKIVSSFKTSLL-----SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV  206 (361)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v  206 (361)
                      ...+..+..+..|.....     .+.+...+.+|...|++++|+|++.++++|+.|++|++||+.+++.+..+.+|...|
T Consensus        42 l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v  121 (343)
T 2xzm_R           42 LISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEV  121 (343)
T ss_dssp             EEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCE
T ss_pred             EEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcE
Confidence            345555666777765432     356778899999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCC---
Q psy8430         207 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG---  283 (361)
Q Consensus       207 ~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---  283 (361)
                      .+++|+|++++|++++.|++|++||+......                        ......+|...|.+++|+|++   
T Consensus       122 ~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~------------------------~~~~~~~~~~~v~~~~~~~~~~~~  177 (343)
T 2xzm_R          122 YSVAFSPDNRQILSAGAEREIKLWNILGECKF------------------------SSAEKENHSDWVSCVRYSPIMKSA  177 (343)
T ss_dssp             EEEEECSSTTEEEEEETTSCEEEEESSSCEEE------------------------ECCTTTSCSSCEEEEEECCCCCSC
T ss_pred             EEEEECCCCCEEEEEcCCCEEEEEeccCCcee------------------------eeecccCCCceeeeeeeccccccc
Confidence            99999999999999999999999998632100                        011113688899999999987   


Q ss_pred             -------CEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCC
Q psy8430         284 -------EQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDC  341 (361)
Q Consensus       284 -------~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~  341 (361)
                             .++++++.|+.|++|| ..+.....+.+|...|.++.+++.+.   ..+.||.|+||  |+
T Consensus       178 ~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iw--d~  242 (343)
T 2xzm_R          178 NKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIW--DI  242 (343)
T ss_dssp             SCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEE--ES
T ss_pred             cccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEE--EC
Confidence                   7999999999999999 45678888999999998854444321   12399999999  66

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.95  E-value=6.4e-27  Score=206.51  Aligned_cols=174  Identities=19%  Similarity=0.215  Sum_probs=137.5

Q ss_pred             EeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe--EEEEEeCCCCCeEEEEEec--CCCEEEEEECCCcEEEEe
Q psy8430         156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLP--NKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       156 ~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~--~~~~~~~h~~~v~~v~~~~--~~~~l~s~~~d~~i~lwd  231 (361)
                      .+.+|.+.|++++|+|+|++|++|+.|++|++||+.++.  .+..+.+|.+.|.+++|+|  ++++|++|+.|++|++||
T Consensus         8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd   87 (316)
T 3bg1_A            8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR   87 (316)
T ss_dssp             ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred             ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence            456999999999999999999999999999999998874  5678899999999999985  489999999999999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCcEEEeeCCCCeE---E
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVETGTI---L  306 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~~---~  306 (361)
                      ++++..                        .....+.+|...|.+++|+|+  +.+|++|+.|+.|++||++++..   .
T Consensus        88 ~~~~~~------------------------~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~  143 (316)
T 3bg1_A           88 EENGTW------------------------EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVK  143 (316)
T ss_dssp             CSSSCC------------------------CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEEC
T ss_pred             CCCCcc------------------------eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCccee
Confidence            875411                        145567789999999999997  88999999999999999987632   3


Q ss_pred             EEeecCCCCCeE-------------------------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         307 QSLTGHDEEPHI-------------------------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       307 ~~~~~h~~~v~~-------------------------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      ..+.+|...+.+                         ++++++     .|+.|+||  |+.+... ..++..|.+|.+.|
T Consensus       144 ~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs-----~D~~v~lW--d~~~~~~-~~~~~~l~~h~~~V  215 (316)
T 3bg1_A          144 KINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGG-----CDNLIKLW--KEEEDGQ-WKEEQKLEAHSDWV  215 (316)
T ss_dssp             CBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCB-----TTSBCCEE--EECTTSC-EEEEECCBCCSSCE
T ss_pred             eeeccccCCcceEEEccccCCccccccccccCccccceEEEec-----CCCeEEEE--EeCCCCc-cceeeecccCCCce
Confidence            455667766544                         355666     99999999  7632221 35778899998753

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.94  E-value=7.9e-27  Score=210.60  Aligned_cols=201  Identities=17%  Similarity=0.136  Sum_probs=155.4

Q ss_pred             eccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe---EEEEEeCCCCCeEEEEE
Q psy8430         135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK---CVLQYSGHSGSVNSVRF  211 (361)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~---~~~~~~~h~~~v~~v~~  211 (361)
                      +..+..+..|.......+.+..+.+|.+.|++++|+|++++|++|+.|++|++||+.++.   ....+.+|...|.+++|
T Consensus        29 ~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~  108 (377)
T 3dwl_C           29 TTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRW  108 (377)
T ss_dssp             CCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEEC
T ss_pred             ecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEE
Confidence            334455555665544447788899999999999999999999999999999999999876   67778889999999999


Q ss_pred             ecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC-CCCcEEEEEEcCCCCEEEEEe
Q psy8430         212 LPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGEQVITAS  290 (361)
Q Consensus       212 ~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~  290 (361)
                      +|++++|++++.|+.|++||+.++..                       ......+.+ |...|.+++|+|++++|++++
T Consensus       109 ~~~~~~l~~~~~d~~i~iwd~~~~~~-----------------------~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~  165 (377)
T 3dwl_C          109 SPNEDKFAVGSGARVISVCYFEQEND-----------------------WWVSKHLKRPLRSTILSLDWHPNNVLLAAGC  165 (377)
T ss_dssp             CTTSSCCEEEESSSCEEECCC----------------------------CCCCEEECSSCCSCEEEEEECTTSSEEEEEE
T ss_pred             CCCCCEEEEEecCCeEEEEEECCccc-----------------------ceeeeEeecccCCCeEEEEEcCCCCEEEEEe
Confidence            99999999999999999999876521                       113566666 999999999999999999999


Q ss_pred             CCCcEEEeeCC------------------CCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcce
Q psy8430         291 WDRVANLFDVE------------------TGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIH  349 (361)
Q Consensus       291 ~d~~v~iwd~~------------------~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~  349 (361)
                      .|+.|++||++                  +++++..+ +|...|.++.+++.+.   ..+.||.|+||  |+.++..+..
T Consensus       166 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iw--d~~~~~~~~~  242 (377)
T 3dwl_C          166 ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIA--YPSAPEQPPR  242 (377)
T ss_dssp             SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-C--EECSTTSCEE
T ss_pred             CCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEE--ECCCCCCcce
Confidence            99999999985                  46677777 8999999866655422   22489999999  8855555445


Q ss_pred             eeeeecccccCC
Q psy8430         350 SVCVFQDIQSTG  361 (361)
Q Consensus       350 ~v~~~~~h~~~~  361 (361)
                      .+..+.+|...|
T Consensus       243 ~~~~~~~~~~~v  254 (377)
T 3dwl_C          243 ALITVKLSQLPL  254 (377)
T ss_dssp             ECCCEECSSSCE
T ss_pred             eeEeecCCCCce
Confidence            578888887653

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.94  E-value=2e-25  Score=198.06  Aligned_cols=223  Identities=17%  Similarity=0.212  Sum_probs=165.4

Q ss_pred             eeeccceeEEeeecCcc--ceeeeEEeeccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEeCCCC---------eEEEEE
Q psy8430         133 LKVQTSKIVSSFKTSLL--SCYKIRSFSGHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTG---------KCVLQY  199 (361)
Q Consensus       133 ~~~~~~~~~~~~~~~~~--~~~~~~~l~~h~~~V~~l~~~~--~~~~l~s~s~d~~i~~wd~~~~---------~~~~~~  199 (361)
                      +.+..+..+..|.....  ..+.+..+.+|.+.|++++|+|  ++.+|++|+.||+|++||+.++         +.+..+
T Consensus        27 ~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~  106 (351)
T 3f3f_A           27 ATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTL  106 (351)
T ss_dssp             EEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEE
T ss_pred             EEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeee
Confidence            34455566667766543  3367888999999999999999  6999999999999999999887         668888


Q ss_pred             eCCCCCeEEEEEecC--CCEEEEEECCCcEEEEeccccccccCCCCCCCCCC---------------CCCCC---CCce-
Q psy8430         200 SGHSGSVNSVRFLPN--KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDE---------------SKEPD---ESSI-  258 (361)
Q Consensus       200 ~~h~~~v~~v~~~~~--~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~---------------~~~~~---~~~~-  258 (361)
                      .+|...|.+++|+|+  +.++++++.||.|++||++++..............               ...+.   .... 
T Consensus       107 ~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~  186 (351)
T 3f3f_A          107 NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLA  186 (351)
T ss_dssp             CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEE
T ss_pred             cccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEE
Confidence            899999999999999  99999999999999999987764432110000000               00000   0000 


Q ss_pred             ---------------ecccccEEEeCCCCcEEEEEEcCCC----CEEEEEeCCCcEEEeeCCCC----------------
Q psy8430         259 ---------------TLRTPVKELLGHSNVVIAADWLSDG----EQVITASWDRVANLFDVETG----------------  303 (361)
Q Consensus       259 ---------------~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~s~~~d~~v~iwd~~~~----------------  303 (361)
                                     ........+.+|...|.+++|+|++    .+|++|+.||.|++||++++                
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  266 (351)
T 3f3f_A          187 VSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMF  266 (351)
T ss_dssp             EEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------
T ss_pred             EecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceecc
Confidence                           0001255667899999999999998    89999999999999999875                


Q ss_pred             ------------------------------eEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCccee
Q psy8430         304 ------------------------------TILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHS  350 (361)
Q Consensus       304 ------------------------------~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~  350 (361)
                                                    +.+..+.+|...|.++.+++...   ..+.||.|+||  |+.++.. ..+
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw--~~~~~~~-~~~  343 (351)
T 3f3f_A          267 DNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLW--KATYSNE-FKC  343 (351)
T ss_dssp             ------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEE--EECTTSC-EEE
T ss_pred             CCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEE--ecCcCcc-hhh
Confidence                                          67788889999999965554422   22489999999  6655444 788


Q ss_pred             eeeecccc
Q psy8430         351 VCVFQDIQ  358 (361)
Q Consensus       351 v~~~~~h~  358 (361)
                      +.++..|+
T Consensus       344 ~~~~~~~~  351 (351)
T 3f3f_A          344 MSVITAQQ  351 (351)
T ss_dssp             EEEEC---
T ss_pred             eeehcccC
Confidence            88888774

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.94  E-value=8.6e-25  Score=213.14  Aligned_cols=187  Identities=22%  Similarity=0.315  Sum_probs=153.6

Q ss_pred             eeeeccceeEEeeecCcc---ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEE
Q psy8430         132 KLKVQTSKIVSSFKTSLL---SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNS  208 (361)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~---~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~  208 (361)
                      ...+..+..+..|.....   .+...+.+.+|.+.|.+++|+|++++|++|+.|++|++||+.++..+..+.+|...|.+
T Consensus       398 l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~  477 (694)
T 3dm0_A          398 IVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLS  477 (694)
T ss_dssp             EEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred             EEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEE
Confidence            345566667777765432   24567889999999999999999999999999999999999999999999999999999


Q ss_pred             EEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCC--CEE
Q psy8430         209 VRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG--EQV  286 (361)
Q Consensus       209 v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l  286 (361)
                      ++|+|+++.|++++.|++|++||+......                       .......+|...|.+++|+|++  ..+
T Consensus       478 ~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~-----------------------~~~~~~~~h~~~v~~~~~~~~~~~~~l  534 (694)
T 3dm0_A          478 VAFSLDNRQIVSASRDRTIKLWNTLGECKY-----------------------TISEGGEGHRDWVSCVRFSPNTLQPTI  534 (694)
T ss_dssp             EEECTTSSCEEEEETTSCEEEECTTSCEEE-----------------------EECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred             EEEeCCCCEEEEEeCCCEEEEEECCCCcce-----------------------eeccCCCCCCCcEEEEEEeCCCCcceE
Confidence            999999999999999999999997533110                       0011124688999999999987  689


Q ss_pred             EEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCC
Q psy8430         287 ITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGT  343 (361)
Q Consensus       287 ~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~  343 (361)
                      ++++.|++|++||++++++..++.+|.+.|.++.+++...   +.+.||.|+||  |+.+
T Consensus       535 ~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iw--d~~~  592 (694)
T 3dm0_A          535 VSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLW--DLAE  592 (694)
T ss_dssp             EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEE--ETTT
T ss_pred             EEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEE--ECCC
Confidence            9999999999999999999999999999999854444321   12399999999  7733

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.94  E-value=3.1e-25  Score=201.70  Aligned_cols=169  Identities=23%  Similarity=0.375  Sum_probs=138.2

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCC
Q psy8430         163 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNND  242 (361)
Q Consensus       163 ~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~  242 (361)
                      .|.+++|+|+|++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++..|++++.|++|++||++++.      
T Consensus       125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~------  198 (393)
T 1erj_A          125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ------  198 (393)
T ss_dssp             BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE------
T ss_pred             eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe------
Confidence            49999999999999999999999999999999999999999999999999999999999999999999997652      


Q ss_pred             CCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEeeCCCCeEEEEe-------ecCCC
Q psy8430         243 NDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSL-------TGHDE  314 (361)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~-------~~h~~  314 (361)
                                          +...+ .+...+.+++|+| ++.++++|+.|+.|++||++++.++..+       .+|..
T Consensus       199 --------------------~~~~~-~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~  257 (393)
T 1erj_A          199 --------------------CSLTL-SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKD  257 (393)
T ss_dssp             --------------------EEEEE-ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSS
T ss_pred             --------------------eEEEE-EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCC
Confidence                                23333 3567899999999 8999999999999999999999988777       57888


Q ss_pred             CCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCC--------cceeeeeecccccC
Q psy8430         315 EPHILCVSSYYS---KVSCDLFQRIQHLDCGTSEN--------PIHSVCVFQDIQST  360 (361)
Q Consensus       315 ~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~--------~~~~v~~~~~h~~~  360 (361)
                      .|.++.+++++.   ..+.||.|++|  |+.+...        ...+...+.||+..
T Consensus       258 ~v~~v~~~~~g~~l~s~s~d~~v~~w--d~~~~~~~~~~~~~~~~~~~~~~~~h~~~  312 (393)
T 1erj_A          258 SVYSVVFTRDGQSVVSGSLDRSVKLW--NLQNANNKSDSKTPNSGTCEVTYIGHKDF  312 (393)
T ss_dssp             CEEEEEECTTSSEEEEEETTSEEEEE--EC---------------CEEEEEECCSSC
T ss_pred             CEEEEEECCCCCEEEEEeCCCEEEEE--ECCCCCCcccccCCCCCcceEEEecccCc
Confidence            888854443321   12389999999  6643221        13456778888764

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.94  E-value=2.9e-25  Score=213.33  Aligned_cols=165  Identities=23%  Similarity=0.347  Sum_probs=139.0

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEE
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI  229 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~l  229 (361)
                      +..+.++.+|.+.|++++|+|++. .|++|+.|++|++||..+++++..+.+|...|.+++|+|++++|++++.|++|++
T Consensus       137 ~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~l  216 (611)
T 1nr0_A          137 GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVL  216 (611)
T ss_dssp             CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEE
Confidence            345667899999999999999987 6999999999999999999999999999999999999999999999999999999


Q ss_pred             EeccccccccCCCCCCCCCCCCCCCCCceecccccEEE-------eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC
Q psy8430         230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL-------LGHSNVVIAADWLSDGEQVITASWDRVANLFDVET  302 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~  302 (361)
                      ||+.++..                          ...+       .+|.+.|.+++|+|+|++|++++.|++|++||+++
T Consensus       217 wd~~~g~~--------------------------~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~  270 (611)
T 1nr0_A          217 YNGVDGTK--------------------------TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT  270 (611)
T ss_dssp             EETTTCCE--------------------------EEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred             EECCCCcE--------------------------eeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCC
Confidence            99876532                          2222       27999999999999999999999999999999998


Q ss_pred             CeEEEEe-------------------------------------------ecCCCCCeEEEEEcCCC---cccCCCeEEE
Q psy8430         303 GTILQSL-------------------------------------------TGHDEEPHILCVSSYYS---KVSCDLFQRI  336 (361)
Q Consensus       303 ~~~~~~~-------------------------------------------~~h~~~v~~~~~s~s~~---~v~~dg~i~i  336 (361)
                      ++++.++                                           .+|...|.++.+++++.   ..+.||.|++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~  350 (611)
T 1nr0_A          271 LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINS  350 (611)
T ss_dssp             TEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             CceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEE
Confidence            8765443                                           46777887754444322   1239999999


Q ss_pred             EcCCCCC
Q psy8430         337 QHLDCGT  343 (361)
Q Consensus       337 W~~d~~~  343 (361)
                      |  |+.+
T Consensus       351 W--d~~~  355 (611)
T 1nr0_A          351 W--DIST  355 (611)
T ss_dssp             E--ETTT
T ss_pred             E--ECCC
Confidence            9  7733

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.94  E-value=3.5e-26  Score=201.76  Aligned_cols=187  Identities=22%  Similarity=0.247  Sum_probs=148.7

Q ss_pred             eeeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEeCCCC--eEEEEEeCCCCCeE
Q psy8430         132 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVN  207 (361)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~--~~~~l~s~s~d~~i~~wd~~~~--~~~~~~~~h~~~v~  207 (361)
                      ...+..+..+..|........++.++.+|.+.|++++|+|  ++.+|++|+.|++|++||+.++  .....+.+|...|.
T Consensus        28 lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~  107 (316)
T 3bg1_A           28 LATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVN  107 (316)
T ss_dssp             EEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCC
T ss_pred             EEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceE
Confidence            3445566677777765555567888999999999999986  4889999999999999999887  46777889999999


Q ss_pred             EEEEecC--CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC---
Q psy8430         208 SVRFLPN--KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD---  282 (361)
Q Consensus       208 ~v~~~~~--~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---  282 (361)
                      +++|+|+  +.+|++|+.|++|++||++.+..                       ......+.+|...|.+++|+|+   
T Consensus       108 ~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~-----------------------~~~~~~~~~h~~~v~~~~~~~~~~~  164 (316)
T 3bg1_A          108 SVCWAPHDYGLILACGSSDGAISLLTYTGEGQ-----------------------WEVKKINNAHTIGCNAVSWAPAVVP  164 (316)
T ss_dssp             EEEECCTTTCSCEEEECSSSCEEEEEECSSSC-----------------------EEECCBTTSSSSCBCCCEECCCCCC
T ss_pred             EEEECCCCCCcEEEEEcCCCCEEEEecCCCCC-----------------------cceeeeeccccCCcceEEEccccCC
Confidence            9999997  78999999999999999865411                       0112334578888999999987   


Q ss_pred             --------------CCEEEEEeCCCcEEEeeCCCC---eEEEEeecCCCCCeEEEEEcCC-------CcccCCCeEEEEc
Q psy8430         283 --------------GEQVITASWDRVANLFDVETG---TILQSLTGHDEEPHILCVSSYY-------SKVSCDLFQRIQH  338 (361)
Q Consensus       283 --------------~~~l~s~~~d~~v~iwd~~~~---~~~~~~~~h~~~v~~~~~s~s~-------~~v~~dg~i~iW~  338 (361)
                                    +.+|++|+.|+.|++||++.+   +++..+.+|...|.++.+++.+       ++.+.||+|+|| 
T Consensus       165 ~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw-  243 (316)
T 3bg1_A          165 GSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIW-  243 (316)
T ss_dssp             ------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEE-
T ss_pred             ccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEE-
Confidence                          478999999999999999865   5778889999998875554431       112499999999 


Q ss_pred             CCCCC
Q psy8430         339 LDCGT  343 (361)
Q Consensus       339 ~d~~~  343 (361)
                       |+.+
T Consensus       244 -~~~~  247 (316)
T 3bg1_A          244 -TCDD  247 (316)
T ss_dssp             -ECSS
T ss_pred             -EccC
Confidence             6633

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.94  E-value=1.9e-25  Score=201.04  Aligned_cols=184  Identities=16%  Similarity=0.191  Sum_probs=152.7

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC--CCeEEEEEeCCCCCeEEEEEecC--CCEEEEEECCCcE
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ--TGKCVLQYSGHSGSVNSVRFLPN--KDLVLSASGDKSV  227 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~--~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~~~d~~i  227 (361)
                      +++..+.+|.+.|++++|+|++.+|++|+.||.|++||+.  +++.+..+.+|...|.+++|+|+  +++|++++.||.|
T Consensus         2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v   81 (379)
T 3jrp_A            2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV   81 (379)
T ss_dssp             ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred             CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence            4567889999999999999999999999999999999998  55777888999999999999976  8999999999999


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCcEEEeeCCCCe-
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVETGT-  304 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~-  304 (361)
                      ++||+.++..                        .....+.+|...|.+++|+|+  +.++++++.|+.|++||++++. 
T Consensus        82 ~iwd~~~~~~------------------------~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~  137 (379)
T 3jrp_A           82 LIWKEENGRW------------------------SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT  137 (379)
T ss_dssp             EEEEEETTEE------------------------EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC
T ss_pred             EEEEcCCCce------------------------eEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc
Confidence            9999876521                        256677789999999999999  9999999999999999999873 


Q ss_pred             -EEEEeecCCCCCeEEEEEcC----------------CCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         305 -ILQSLTGHDEEPHILCVSSY----------------YSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       305 -~~~~~~~h~~~v~~~~~s~s----------------~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                       ....+.+|...|.++.+++.                .+..+.||.|++|  |++++.....++..+.+|.+.|
T Consensus       138 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~--d~~~~~~~~~~~~~~~~h~~~v  209 (379)
T 3jrp_A          138 TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIW--KYNSDAQTYVLESTLEGHSDWV  209 (379)
T ss_dssp             CCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEE--EEETTTTEEEEEEEECCCSSCE
T ss_pred             eeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEE--EecCCCcceeeEEEEecccCcE
Confidence             44566788888888776651                1123589999999  8765555456778888998653

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.94  E-value=8.7e-25  Score=199.23  Aligned_cols=183  Identities=22%  Similarity=0.338  Sum_probs=150.4

Q ss_pred             eccceeEEeeecCccc--eeeeEEeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCC-------eEEEEEeCCCC
Q psy8430         135 VQTSKIVSSFKTSLLS--CYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTG-------KCVLQYSGHSG  204 (361)
Q Consensus       135 ~~~~~~~~~~~~~~~~--~~~~~~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~-------~~~~~~~~h~~  204 (361)
                      +..+..+.+|......  ...+..+.+|.+.|++++|+| ++.+|++|+.||+|++||+.++       +++..+.+|..
T Consensus        53 ~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~  132 (402)
T 2aq5_A           53 ASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTK  132 (402)
T ss_dssp             CSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSS
T ss_pred             EcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCC
Confidence            4555666667654322  145667889999999999999 9999999999999999999887       66788999999


Q ss_pred             CeEEEEEecCC-CEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE--eCCCCcEEEEEEcC
Q psy8430         205 SVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL--LGHSNVVIAADWLS  281 (361)
Q Consensus       205 ~v~~v~~~~~~-~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~  281 (361)
                      .|.+++|+|++ .+|++++.||.|++||+.++                          .....+  .+|...|.+++|+|
T Consensus       133 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~--------------------------~~~~~~~~~~~~~~v~~~~~~~  186 (402)
T 2aq5_A          133 RVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG--------------------------AAVLTLGPDVHPDTIYSVDWSR  186 (402)
T ss_dssp             CEEEEEECSSBTTEEEEEETTSCEEEEETTTT--------------------------EEEEEECTTTCCSCEEEEEECT
T ss_pred             eEEEEEECcCCCCEEEEEcCCCEEEEEECCCC--------------------------CccEEEecCCCCCceEEEEECC
Confidence            99999999998 69999999999999999765                          245666  68999999999999


Q ss_pred             CCCEEEEEeCCCcEEEeeCCCCeEEEEe-ecCCCC-CeEEEEEcCCC--cc----cCCCeEEEEcCCCCCCC
Q psy8430         282 DGEQVITASWDRVANLFDVETGTILQSL-TGHDEE-PHILCVSSYYS--KV----SCDLFQRIQHLDCGTSE  345 (361)
Q Consensus       282 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~-~~h~~~-v~~~~~s~s~~--~v----~~dg~i~iW~~d~~~~~  345 (361)
                      ++.+|++++.|+.|++||+++++.+..+ .+|.+. +..+.++++..  .+    +.|+.|++|  |+.++.
T Consensus       187 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iw--d~~~~~  256 (402)
T 2aq5_A          187 DGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALW--DTKHLE  256 (402)
T ss_dssp             TSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEE--ETTBCS
T ss_pred             CCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEE--cCcccc
Confidence            9999999999999999999999999998 678765 56544443311  11    289999999  774433

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.94  E-value=2e-24  Score=205.75  Aligned_cols=176  Identities=30%  Similarity=0.446  Sum_probs=155.0

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEE
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI  229 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~l  229 (361)
                      +++++..+.+|...|.+++|+|+|.+|++++.|++|++||. +++.+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus       374 ~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~  452 (577)
T 2ymu_A          374 NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKL  452 (577)
T ss_dssp             TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred             CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEE
Confidence            45778889999999999999999999999999999999996 67788899999999999999999999999999999999


Q ss_pred             EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEe
Q psy8430         230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL  309 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~  309 (361)
                      ||....                           ....+.+|...|.+++|+|++++|++++.|+.|++||. +++++..+
T Consensus       453 w~~~~~---------------------------~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~  504 (577)
T 2ymu_A          453 WNRNGQ---------------------------LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTL  504 (577)
T ss_dssp             EETTSC---------------------------EEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEE
T ss_pred             EECCCC---------------------------EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEE
Confidence            996432                           56778899999999999999999999999999999995 68999999


Q ss_pred             ecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         310 TGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       310 ~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      .+|...|.++.++++..   ..+.||.|+||  |.   .  ..++.++.||.+.|
T Consensus       505 ~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lw--d~---~--~~~~~~~~~h~~~v  552 (577)
T 2ymu_A          505 TGHSSSVRGVAFSPDGQTIASASDDKTVKLW--NR---N--GQLLQTLTGHSSSV  552 (577)
T ss_dssp             ECCSSCEEEEEECTTSSCEEEEETTSEEEEE--CT---T--SCEEEEEECCSSCE
T ss_pred             eCCCCCEEEEEEcCCCCEEEEEECcCEEEEE--eC---C--CCEEEEEcCCCCCE
Confidence            99999999966665522   23489999999  65   1  35688899998764

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.93  E-value=5.4e-25  Score=201.36  Aligned_cols=211  Identities=15%  Similarity=0.107  Sum_probs=150.8

Q ss_pred             eeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEE
Q psy8430         139 KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV  218 (361)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l  218 (361)
                      ..+..|..  ...+....+.+|.+.|++++|+|++.+|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++++|
T Consensus       119 g~i~iwd~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l  196 (420)
T 3vl1_A          119 GDIKVLDS--NFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNV  196 (420)
T ss_dssp             SCEEEECT--TSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEE
T ss_pred             CCEEEEeC--CCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEE
Confidence            33444443  4566777888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEe
Q psy8430         219 LSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLF  298 (361)
Q Consensus       219 ~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iw  298 (361)
                      ++++.|+.|++||++++................  ................+...+.+++|+|+++++++|+.||.|++|
T Consensus       197 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~  274 (420)
T 3vl1_A          197 LSASLDGTIRLWECGTGTTIHTFNRKENPHDGV--NSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVH  274 (420)
T ss_dssp             EEEETTSCEEEEETTTTEEEEEECBTTBTTCCE--EEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEE
T ss_pred             EEEcCCCcEEEeECCCCceeEEeecCCCCCCCc--cEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEE
Confidence            999999999999998764432211000000000  000000000000011234566667778999999999999999999


Q ss_pred             eCCCCeEEEEee-cCCCCCeEEEEEcCCC----cccCCCeEEEEcCCCCCCCCcceeeeeecccc
Q psy8430         299 DVETGTILQSLT-GHDEEPHILCVSSYYS----KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQ  358 (361)
Q Consensus       299 d~~~~~~~~~~~-~h~~~v~~~~~s~s~~----~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~  358 (361)
                      |+++++.+..+. .|...+.++.+++...    ..+.||.|++|  |+.++   ..++..+.+|.
T Consensus       275 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vw--d~~~~---~~~~~~~~~~~  334 (420)
T 3vl1_A          275 NVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQW--DLRSP---ECPVGEFLINE  334 (420)
T ss_dssp             ETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEE--ETTCT---TSCSEEEEEST
T ss_pred             ECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEE--EcCCC---cCchhhhhccC
Confidence            999998887775 4788888855554421    12389999999  88333   33456666643

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.93  E-value=7.8e-25  Score=210.30  Aligned_cols=186  Identities=14%  Similarity=0.128  Sum_probs=150.2

Q ss_pred             eEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--eEEEEEeCCCCCeEEEEEecCCCE
Q psy8430         140 IVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVNSVRFLPNKDL  217 (361)
Q Consensus       140 ~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~--~~~~~~~~h~~~v~~v~~~~~~~~  217 (361)
                      .+..|..  .++.....+.+|.+.|++++|+|+|.+|++|+.|++|+|||+.++  .....+.+|.+.|.+++|+|+++.
T Consensus        40 ~v~l~~~--~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~  117 (611)
T 1nr0_A           40 SVYTVPV--GSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKR  117 (611)
T ss_dssp             EEEEEET--TCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCE
T ss_pred             EEEEecC--CCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCE
Confidence            3444443  355678889999999999999999999999999999999999754  445678899999999999999999


Q ss_pred             EEEEECC----CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCC-EEEEEeCC
Q psy8430         218 VLSASGD----KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITASWD  292 (361)
Q Consensus       218 l~s~~~d----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d  292 (361)
                      |++++.+    +.|++||...                            ....+.+|...|.+++|+|++. .|++|+.|
T Consensus       118 l~~~~~~~~~~~~v~~wd~~~----------------------------~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D  169 (611)
T 1nr0_A          118 IAAVGEGRERFGHVFLFDTGT----------------------------SNGNLTGQARAMNSVDFKPSRPFRIISGSDD  169 (611)
T ss_dssp             EEEEECCSSCSEEEEETTTCC----------------------------BCBCCCCCSSCEEEEEECSSSSCEEEEEETT
T ss_pred             EEEEECCCCceeEEEEeeCCC----------------------------CcceecCCCCCceEEEECCCCCeEEEEEeCC
Confidence            9998875    4788887431                            3455779999999999999987 59999999


Q ss_pred             CcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeeeec-------ccccCC
Q psy8430         293 RVANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQ-------DIQSTG  361 (361)
Q Consensus       293 ~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~-------~h~~~~  361 (361)
                      ++|++||..+++++.++.+|...|.++.+++++.   ..+.|+.|+||  |..+    ..++..+.       +|.+.|
T Consensus       170 ~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lw--d~~~----g~~~~~~~~~~~~~~~h~~~V  242 (611)
T 1nr0_A          170 NTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLY--NGVD----GTKTGVFEDDSLKNVAHSGSV  242 (611)
T ss_dssp             SCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE--ETTT----CCEEEECBCTTSSSCSSSSCE
T ss_pred             CeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEE--ECCC----CcEeeeeccccccccccCCCE
Confidence            9999999999999999999999999855544321   22399999999  7733    33455553       787653

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.93  E-value=1.9e-24  Score=195.50  Aligned_cols=180  Identities=11%  Similarity=0.071  Sum_probs=148.0

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCeEEEEEe--CCCCCeEEEEEec-CCCEEEEEECCC
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLP-NKDLVLSASGDK  225 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~-~~l~s~s~d~~i~~wd~~~~~~~~~~~--~h~~~v~~v~~~~-~~~~l~s~~~d~  225 (361)
                      .....+.+.+|.+.|++++|+|++ .+|++|+.|++|++||+.+++....+.  +|...|.+++|+| ++.+|++++.|+
T Consensus        62 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~  141 (383)
T 3ei3_B           62 SYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG  141 (383)
T ss_dssp             TCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT
T ss_pred             ccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC
Confidence            345667888999999999999999 899999999999999999887776665  6999999999999 789999999999


Q ss_pred             cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe---CCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC
Q psy8430         226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL---GHSNVVIAADWLSDGEQVITASWDRVANLFDVET  302 (361)
Q Consensus       226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~  302 (361)
                      .|++||+...                           ....+.   +|...|.+++|+|++.++++|+.|+.|++||+ +
T Consensus       142 ~i~iwd~~~~---------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~  193 (383)
T 3ei3_B          142 ATTLRDFSGS---------------------------VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-D  193 (383)
T ss_dssp             EEEEEETTSC---------------------------EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-T
T ss_pred             EEEEEECCCC---------------------------ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-C
Confidence            9999998743                           333443   34588999999999999999999999999999 5


Q ss_pred             CeEEEEeecCCCCCeEEEEEcCCC----cccCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430         303 GTILQSLTGHDEEPHILCVSSYYS----KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST  360 (361)
Q Consensus       303 ~~~~~~~~~h~~~v~~~~~s~s~~----~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~  360 (361)
                      ++++..+.+|...|.++.+++...    ..+.||.|++|  |+++.+....++..+ +|.+.
T Consensus       194 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw--d~~~~~~~~~~~~~~-~~~~~  252 (383)
T 3ei3_B          194 GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLW--DLRNIKDKNSYIAEM-PHEKP  252 (383)
T ss_dssp             SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEE--EGGGCCSTTCEEEEE-ECSSC
T ss_pred             CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEE--eCCCCCcccceEEEe-cCCCc
Confidence            889999999999999855554421    12489999999  875544444555555 57654

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.93  E-value=2.5e-24  Score=205.15  Aligned_cols=159  Identities=33%  Similarity=0.547  Sum_probs=143.8

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEE
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI  229 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~l  229 (361)
                      +++.+..+.+|.+.|++++|+|++.+|++++.|++|++||. +++.+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus       415 ~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~i  493 (577)
T 2ymu_A          415 NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKL  493 (577)
T ss_dssp             TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEE
T ss_pred             CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEE
Confidence            45778899999999999999999999999999999999996 57788899999999999999999999999999999999


Q ss_pred             EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEe
Q psy8430         230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL  309 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~  309 (361)
                      ||...                           .....+.+|...|++++|+|+|++|++++.|+.|++||. +++++.++
T Consensus       494 w~~~~---------------------------~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~  545 (577)
T 2ymu_A          494 WNRNG---------------------------QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTL  545 (577)
T ss_dssp             EETTS---------------------------CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEE
T ss_pred             EcCCC---------------------------CEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEE
Confidence            99642                           267788999999999999999999999999999999995 68999999


Q ss_pred             ecCCCCCeEEEEEcCCC---cccCCCeEEEE
Q psy8430         310 TGHDEEPHILCVSSYYS---KVSCDLFQRIQ  337 (361)
Q Consensus       310 ~~h~~~v~~~~~s~s~~---~v~~dg~i~iW  337 (361)
                      .+|...|.++.+++++.   +.+.|++|++|
T Consensus       546 ~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~W  576 (577)
T 2ymu_A          546 TGHSSSVWGVAFSPDGQTIASASSDKTVKLW  576 (577)
T ss_dssp             ECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred             cCCCCCEEEEEEcCCCCEEEEEeCCCEEEEe
Confidence            99999999977776532   23589999999

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.93  E-value=1.9e-24  Score=210.77  Aligned_cols=178  Identities=21%  Similarity=0.285  Sum_probs=145.5

Q ss_pred             eeeEEeeccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCC-----CeEEEEEeCCCCCeEEEEEecCCCEEEEEECCC
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQT-----GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK  225 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~-~~l~s~s~d~~i~~wd~~~-----~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~  225 (361)
                      .....+.+|.+.|++++|+|++ .+|++||.|++|++||+..     +.....+.+|...|.+++|+|++++|++|+.||
T Consensus       373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg  452 (694)
T 3dm0_A          373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG  452 (694)
T ss_dssp             EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence            3456788999999999999864 6999999999999999875     345678899999999999999999999999999


Q ss_pred             cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE
Q psy8430         226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI  305 (361)
Q Consensus       226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~  305 (361)
                      +|++||+.++                          .....+.+|...|.+++|+|++++|++|+.|++|++||......
T Consensus       453 ~v~vwd~~~~--------------------------~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~  506 (694)
T 3dm0_A          453 ELRLWDLAAG--------------------------VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECK  506 (694)
T ss_dssp             EEEEEETTTT--------------------------EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE
T ss_pred             cEEEEECCCC--------------------------cceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcc
Confidence            9999998765                          25677889999999999999999999999999999999875433


Q ss_pred             EEEe---ecCCCCCeEEEEEcCC-----CcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         306 LQSL---TGHDEEPHILCVSSYY-----SKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       306 ~~~~---~~h~~~v~~~~~s~s~-----~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      ....   .+|...|.++.+++..     .+.+.||.|+||  |+   +. ..++..+.+|.+.|
T Consensus       507 ~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vw--d~---~~-~~~~~~~~~h~~~v  564 (694)
T 3dm0_A          507 YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVW--NL---SN-CKLRSTLAGHTGYV  564 (694)
T ss_dssp             EEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEE--ET---TT-CCEEEEECCCSSCE
T ss_pred             eeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEE--EC---CC-CcEEEEEcCCCCCE
Confidence            3222   3577777775444331     112399999999  77   44 45678899998753

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.93  E-value=3.8e-24  Score=189.85  Aligned_cols=176  Identities=21%  Similarity=0.260  Sum_probs=147.5

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCC-----eEEEEEeCCCCCeEEEEEecCCCEEEEEE
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTG-----KCVLQYSGHSGSVNSVRFLPNKDLVLSAS  222 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~~-----~~~~~~~~h~~~v~~v~~~~~~~~l~s~~  222 (361)
                      .+..+..+|+||.+.|++|+|+|+ +++|+|||.|++|++||+.++     .+...+.+|...|.+++|+|++++|++++
T Consensus        26 ~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~  105 (340)
T 4aow_A           26 EQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGS  105 (340)
T ss_dssp             CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred             CceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEc
Confidence            455677889999999999999997 679999999999999998754     45778899999999999999999999999


Q ss_pred             CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC
Q psy8430         223 GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET  302 (361)
Q Consensus       223 ~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~  302 (361)
                      .|+.|++|+....                          ........+...+..+.+++++.++++++.|+.+++||+..
T Consensus       106 ~d~~i~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~  159 (340)
T 4aow_A          106 WDGTLRLWDLTTG--------------------------TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLG  159 (340)
T ss_dssp             TTSEEEEEETTTT--------------------------EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS
T ss_pred             ccccceEEeeccc--------------------------ceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCC
Confidence            9999999998654                          24555667888899999999999999999999999999986


Q ss_pred             CeEE-EEeecCCCCCeE----------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         303 GTIL-QSLTGHDEEPHI----------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       303 ~~~~-~~~~~h~~~v~~----------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      .... ....+|...+..          ++++++     .|+.|++|  |.   +. ..++..+.+|++.|
T Consensus       160 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~-----~d~~i~i~--d~---~~-~~~~~~~~~h~~~v  218 (340)
T 4aow_A          160 VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG-----WDKLVKVW--NL---AN-CKLKTNHIGHTGYL  218 (340)
T ss_dssp             CEEEEECSSSCSSCEEEEEECSCSSSCEEEEEE-----TTSCEEEE--ET---TT-TEEEEEECCCSSCE
T ss_pred             CceEEEEeccccCcccceEEccCCCCcEEEEEc-----CCCEEEEE--EC---CC-CceeeEecCCCCcE
Confidence            5443 345667777776          445555     99999999  87   44 56788889998754

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.93  E-value=1.8e-24  Score=191.84  Aligned_cols=133  Identities=19%  Similarity=0.230  Sum_probs=113.9

Q ss_pred             EEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC----eEEEEEeCCCCCeEEEEEec--CCCEEEEEECCCcEE
Q psy8430         155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG----KCVLQYSGHSGSVNSVRFLP--NKDLVLSASGDKSVH  228 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~----~~~~~~~~h~~~v~~v~~~~--~~~~l~s~~~d~~i~  228 (361)
                      ..+.+|.+.|++++|+|++.+|++|+.||+|++||+.++    +....+.+|...|.+++|+|  ++.+|++++.||.|+
T Consensus         5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~   84 (351)
T 3f3f_A            5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK   84 (351)
T ss_dssp             CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred             ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence            346799999999999999999999999999999999876    56778889999999999999  599999999999999


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCcEEEeeCCCCe
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVETGT  304 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~  304 (361)
                      +||+..+....                 ......+...+.+|...|.+++|+|+  +.++++++.||.|++||+++++
T Consensus        85 vwd~~~~~~~~-----------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~  145 (351)
T 3f3f_A           85 LWEEDPDQEEC-----------------SGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS  145 (351)
T ss_dssp             EEEECTTSCTT-----------------SSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred             EEecCCCcccc-----------------cccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence            99997653211                 01111356777889999999999999  9999999999999999987543

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.93  E-value=7.1e-25  Score=202.02  Aligned_cols=177  Identities=12%  Similarity=0.006  Sum_probs=143.4

Q ss_pred             eeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEe--CCCCCeEEEE
Q psy8430         134 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVR  210 (361)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~--~h~~~v~~v~  210 (361)
                      .+..+..+..|............+.+|.+.|++|+|+| ++.+|++||.||+|++||++++.......  .+...+.+++
T Consensus       137 sGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~  216 (435)
T 4e54_B          137 VGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLD  216 (435)
T ss_dssp             EEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEE
T ss_pred             EEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEE
Confidence            34455567777776666677777889999999999998 78899999999999999998765433333  2345678999


Q ss_pred             EecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCC-EEEEE
Q psy8430         211 FLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITA  289 (361)
Q Consensus       211 ~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~  289 (361)
                      |+|++.+|++|+.||.|++||++..                           .+..+.+|...|.+++|+|++. ++++|
T Consensus       217 ~~~~~~~l~~g~~dg~i~~wd~~~~---------------------------~~~~~~~h~~~v~~v~~~p~~~~~~~s~  269 (435)
T 4e54_B          217 VSASSRMVVTGDNVGNVILLNMDGK---------------------------ELWNLRMHKKKVTHVALNPCCDWFLATA  269 (435)
T ss_dssp             EETTTTEEEEECSSSBEEEEESSSC---------------------------BCCCSBCCSSCEEEEEECTTCSSEEEEE
T ss_pred             ECCCCCEEEEEeCCCcEeeeccCcc---------------------------eeEEEecccceEEeeeecCCCceEEEEe
Confidence            9999999999999999999998643                           4556678999999999999886 78899


Q ss_pred             eCCCcEEEeeCCCCeEEEEe---ecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCC
Q psy8430         290 SWDRVANLFDVETGTILQSL---TGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTS  344 (361)
Q Consensus       290 ~~d~~v~iwd~~~~~~~~~~---~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~  344 (361)
                      +.|+.|++||+++++....+   .+|...|.+        ++++++     .||.|+||  |+.++
T Consensus       270 s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~-----~D~~i~iw--d~~~~  328 (435)
T 4e54_B          270 SVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTD-----QKSEIRVY--SASQW  328 (435)
T ss_dssp             ETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEE-----SSSCEEEE--ESSSS
T ss_pred             cCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEc-----CCCEEEEE--ECCCC
Confidence            99999999999987654433   568888887        566666     99999999  77443

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.93  E-value=1.8e-25  Score=205.92  Aligned_cols=180  Identities=15%  Similarity=0.148  Sum_probs=140.2

Q ss_pred             ceeeeEEeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCe--EEEEEeCCCCCeEEEEEec-CCCEEEEEECCC
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLP-NKDLVLSASGDK  225 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~--~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~  225 (361)
                      .........+|...|+||+|+| ++++||+|+.||+|+|||+.++.  ....+.+|.+.|.+|+|+| ++.+|++|+.||
T Consensus       108 ~~~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~  187 (435)
T 4e54_B          108 SYRILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG  187 (435)
T ss_dssp             TTTSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS
T ss_pred             ceeecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC
Confidence            3345566778999999999999 56799999999999999998764  3445568999999999998 688999999999


Q ss_pred             cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe---CCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC
Q psy8430         226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL---GHSNVVIAADWLSDGEQVITASWDRVANLFDVET  302 (361)
Q Consensus       226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~  302 (361)
                      +|++||++++                           ....+.   .+...+.+++|+|++.+|++|+.||.|++||++ 
T Consensus       188 ~v~iwd~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-  239 (435)
T 4e54_B          188 TTRLQDFKGN---------------------------ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-  239 (435)
T ss_dssp             CEEEEETTSC---------------------------EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-
T ss_pred             EEEEeeccCC---------------------------ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-
Confidence            9999998754                           222222   334567899999999999999999999999987 


Q ss_pred             CeEEEEeecCCCCCeEEEEEcCCC----cccCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430         303 GTILQSLTGHDEEPHILCVSSYYS----KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST  360 (361)
Q Consensus       303 ~~~~~~~~~h~~~v~~~~~s~s~~----~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~  360 (361)
                      ++.+.++.+|...|.++.+++...    ..+.||.|+||  |+++.+. ...+....+|...
T Consensus       240 ~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iw--d~~~~~~-~~~~~~~~~h~~~  298 (435)
T 4e54_B          240 GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIW--DLRQVRG-KASFLYSLPHRHP  298 (435)
T ss_dssp             SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEE--ETTTCCS-SSCCSBCCBCSSC
T ss_pred             cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEE--ecccccc-cceEEEeeecccc
Confidence            567788899999998855543311    12389999999  7754443 2334445677654

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.93  E-value=1e-24  Score=204.49  Aligned_cols=193  Identities=13%  Similarity=0.075  Sum_probs=148.9

Q ss_pred             cceeEEeeecCccce--eeeEEeeccCCCeEEEEEcCC------CCEEEEEeCCCcEEEEeCCCCeE-----------EE
Q psy8430         137 TSKIVSSFKTSLLSC--YKIRSFSGHRDGVWDVAVRPG------QPVLGSASADRTVRLWSTQTGKC-----------VL  197 (361)
Q Consensus       137 ~~~~~~~~~~~~~~~--~~~~~l~~h~~~V~~l~~~~~------~~~l~s~s~d~~i~~wd~~~~~~-----------~~  197 (361)
                      .+..+..|.......  ....++.+|.+.|++++|+|+      +.+||+|+.||+|++||+..+..           ..
T Consensus       181 ~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~  260 (524)
T 2j04_B          181 HSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSL  260 (524)
T ss_dssp             -CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSE
T ss_pred             CCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceE
Confidence            344566666544332  223557788999999999996      57999999999999999976632           34


Q ss_pred             EEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEE
Q psy8430         198 QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAA  277 (361)
Q Consensus       198 ~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  277 (361)
                      .+.+|...|.+++|+|+ ..|++|+.||+|++||++++.                         .+...+.+|...|.++
T Consensus       261 ~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~-------------------------~~~~~~~~H~~~V~sv  314 (524)
T 2j04_B          261 TLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPE-------------------------VPSFYDQVHDSYILSV  314 (524)
T ss_dssp             EECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCS-------------------------SCSEEEECSSSCEEEE
T ss_pred             EEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCC-------------------------CceEEeecccccEEEE
Confidence            67889999999999985 589999999999999997541                         2456688999999999


Q ss_pred             --EEcCCC-CEEEEEeCCCcEEEeeCCCCeEEEEeecCCC--CCeEEEEEcCC---CcccCCCeEEEEcCCCCCCCCcce
Q psy8430         278 --DWLSDG-EQVITASWDRVANLFDVETGTILQSLTGHDE--EPHILCVSSYY---SKVSCDLFQRIQHLDCGTSENPIH  349 (361)
Q Consensus       278 --~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~--~v~~~~~s~s~---~~v~~dg~i~iW~~d~~~~~~~~~  349 (361)
                        +|+|+| .+|++|+.|++|+|||+++++++.++.+|..  .+.++.+++..   +..+.|++|+||  |+   +. ..
T Consensus       315 ~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lw--d~---~~-~~  388 (524)
T 2j04_B          315 STAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAV--PS---RA-AF  388 (524)
T ss_dssp             EEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEE--ET---TC-TT
T ss_pred             EEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEE--EC---cc-cc
Confidence              578888 8999999999999999999988888877753  35554454431   112389999999  88   44 44


Q ss_pred             eeeeecccccCC
Q psy8430         350 SVCVFQDIQSTG  361 (361)
Q Consensus       350 ~v~~~~~h~~~~  361 (361)
                      ++..+.||.+.|
T Consensus       389 ~~~~l~gH~~~V  400 (524)
T 2j04_B          389 AVHPLVSRETTI  400 (524)
T ss_dssp             CCEEEEECSSCE
T ss_pred             cceeeecCCCce
Confidence            567788898754

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.93  E-value=9.7e-24  Score=195.77  Aligned_cols=214  Identities=24%  Similarity=0.359  Sum_probs=163.1

Q ss_pred             eeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec
Q psy8430         134 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP  213 (361)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~  213 (361)
                      .+..+..+..|..  .+++.+..+.+|.+.|++++|+|++ .|++|+.||+|++||+.+++.+..+.+|...|.+++|++
T Consensus       137 sgs~dg~i~vwd~--~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~  213 (464)
T 3v7d_B          137 TGADDKMIRVYDS--INKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVE  213 (464)
T ss_dssp             EEETTSCEEEEET--TTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEE
T ss_pred             EEcCCCcEEEEEC--CCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEec
Confidence            3444455555554  4567889999999999999999988 999999999999999999999999999999999999995


Q ss_pred             --CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC
Q psy8430         214 --NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW  291 (361)
Q Consensus       214 --~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~  291 (361)
                        ++.++++++.||.|++||+.+..................   ...........+.+|...+.++  ++++.++++|+.
T Consensus       214 ~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~  288 (464)
T 3v7d_B          214 YKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFH---TPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSY  288 (464)
T ss_dssp             SSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEES---CGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEET
T ss_pred             CCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEee---ccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeC
Confidence              678999999999999999987644322111110000000   0001111356778899999887  558999999999


Q ss_pred             CCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         292 DRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       292 d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      |+.|++||+++++++..+.+|...+.++.+++...   ..+.||.|++|  |+   +. ..++..+.+|...|
T Consensus       289 d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vw--d~---~~-~~~~~~~~~h~~~v  355 (464)
T 3v7d_B          289 DNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIW--DL---EN-GELMYTLQGHTALV  355 (464)
T ss_dssp             TSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEE--ET---TT-TEEEEEECCCSSCE
T ss_pred             CCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEE--EC---CC-CcEEEEEeCCCCcE
Confidence            99999999999999999999999998855544311   12399999999  77   43 56788999998754

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.93  E-value=7.1e-24  Score=190.48  Aligned_cols=199  Identities=16%  Similarity=0.170  Sum_probs=159.2

Q ss_pred             eeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEE--EeCCCCCeEEEEE
Q psy8430         134 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ--YSGHSGSVNSVRF  211 (361)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~--~~~h~~~v~~v~~  211 (361)
                      .+..+..+..|.......+.+..+.+|.+.|++++|+|++.+|++++.|+.|++||+.+++....  +..|...|.+++|
T Consensus        25 ~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~  104 (372)
T 1k8k_C           25 ICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRW  104 (372)
T ss_dssp             EECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEE
T ss_pred             EEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEE
Confidence            34445666677666555568899999999999999999999999999999999999988865444  3679999999999


Q ss_pred             ecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC
Q psy8430         212 LPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW  291 (361)
Q Consensus       212 ~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~  291 (361)
                      +|++++|++++.|+.|++||+......                      ........+|...|.+++|+|++.++++++.
T Consensus       105 ~~~~~~l~~~~~d~~v~i~d~~~~~~~----------------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  162 (372)
T 1k8k_C          105 APNEKKFAVGSGSRVISICYFEQENDW----------------------WVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC  162 (372)
T ss_dssp             CTTSSEEEEEETTSSEEEEEEETTTTE----------------------EEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred             CCCCCEEEEEeCCCEEEEEEecCCCcc----------------------eeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence            999999999999999999998765210                      0012223568899999999999999999999


Q ss_pred             CCcEEEeeC------------------CCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCccee
Q psy8430         292 DRVANLFDV------------------ETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHS  350 (361)
Q Consensus       292 d~~v~iwd~------------------~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~  350 (361)
                      |+.|++||+                  .+++++..+.+|...+.++.+++...   ..+.||.|++|  |+   +. ..+
T Consensus       163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~--d~---~~-~~~  236 (372)
T 1k8k_C          163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLA--DA---DK-KMA  236 (372)
T ss_dssp             TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEE--EG---GG-TTE
T ss_pred             CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEE--EC---CC-Cce
Confidence            999999995                  47889999999999998855544421   12389999999  77   33 456


Q ss_pred             eeeecccccC
Q psy8430         351 VCVFQDIQST  360 (361)
Q Consensus       351 v~~~~~h~~~  360 (361)
                      +..+.+|..+
T Consensus       237 ~~~~~~~~~~  246 (372)
T 1k8k_C          237 VATLASETLP  246 (372)
T ss_dssp             EEEEECSSCC
T ss_pred             eEEEccCCCC
Confidence            7778888654

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.93  E-value=2.3e-24  Score=193.37  Aligned_cols=172  Identities=17%  Similarity=0.189  Sum_probs=143.6

Q ss_pred             eeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEe--CCCCCeEEEEEecC-
Q psy8430         139 KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPN-  214 (361)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~-  214 (361)
                      ..+..|..  .+++.+..+.+|.+.|++++|+|++. ++++++.|++|++||+++++....+.  .|...|.+++|+|+ 
T Consensus       161 g~v~iwd~--~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~  238 (357)
T 4g56_B          161 FSVKVWDL--SQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEK  238 (357)
T ss_dssp             SCEEEEET--TTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTS
T ss_pred             CeEEEEEC--CCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcc
Confidence            33444433  45678889999999999999999875 89999999999999999887665543  57788999999997 


Q ss_pred             CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCC-CEEEEEeCCC
Q psy8430         215 KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG-EQVITASWDR  293 (361)
Q Consensus       215 ~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~  293 (361)
                      +.+|++|+.|+.|++||++++                          .+...+.+|...|++++|+|++ .+|++|+.|+
T Consensus       239 ~~~la~g~~d~~i~~wd~~~~--------------------------~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~  292 (357)
T 4g56_B          239 DDTFACGDETGNVSLVNIKNP--------------------------DSAQTSAVHSQNITGLAYSYHSSPFLASISEDC  292 (357)
T ss_dssp             TTEEEEEESSSCEEEEESSCG--------------------------GGCEEECCCSSCEEEEEECSSSSCCEEEEETTS
T ss_pred             cceEEEeecccceeEEECCCC--------------------------cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCC
Confidence            568899999999999999765                          3667888999999999999987 5789999999


Q ss_pred             cEEEeeCCCCeEEEEeecCCCCCeEEEEEcC----CCcccCCCeEEEEcCCC
Q psy8430         294 VANLFDVETGTILQSLTGHDEEPHILCVSSY----YSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       294 ~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s----~~~v~~dg~i~iW~~d~  341 (361)
                      +|+|||+++++++..+ +|.+.|.++.+++.    +++.+.||.|++|  |+
T Consensus       293 ~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW--~~  341 (357)
T 4g56_B          293 TVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHH--HL  341 (357)
T ss_dssp             CEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEE--EC
T ss_pred             EEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEE--EC
Confidence            9999999999988765 79999999777642    1234699999999  66

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.93  E-value=5e-25  Score=200.30  Aligned_cols=216  Identities=13%  Similarity=0.110  Sum_probs=138.6

Q ss_pred             eeccceeEEeeecCccce---eeeEEeeccCCCeEEEEEcC--------CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCC
Q psy8430         134 KVQTSKIVSSFKTSLLSC---YKIRSFSGHRDGVWDVAVRP--------GQPVLGSASADRTVRLWSTQTGKCVLQYSGH  202 (361)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~---~~~~~l~~h~~~V~~l~~~~--------~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h  202 (361)
                      .+..+..+..|.......   ..+..+.||.+.|++++|+|        ++++|++||.|++|+|||+.++.++..+.+|
T Consensus       106 s~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~  185 (393)
T 4gq1_A          106 CVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPL  185 (393)
T ss_dssp             EEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEEC
T ss_pred             EEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCC
Confidence            344455566665544332   34566789999999999998        7889999999999999999988888888889


Q ss_pred             CCCeEEEEEecCCC-EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEc-
Q psy8430         203 SGSVNSVRFLPNKD-LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL-  280 (361)
Q Consensus       203 ~~~v~~v~~~~~~~-~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-  280 (361)
                      ...|.+++|+|++. +|++++.|++|++||++++................... .............+|...+.++.|+ 
T Consensus       186 ~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s-~~~~~~~~~~~~~~~~~~v~~v~~~~  264 (393)
T 4gq1_A          186 SSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLT-LNTLPLVNTCHSSGIASSLANVRWIG  264 (393)
T ss_dssp             SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEE-EESGGGC------CCSSSCSEEEEET
T ss_pred             CCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEe-cccccceeeeecccccccceeeeeec
Confidence            99999999999874 79999999999999998775533221111110000000 0000011223345788899999987 


Q ss_pred             CCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE----------------------------EEEEcCCCcccCCC
Q psy8430         281 SDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI----------------------------LCVSSYYSKVSCDL  332 (361)
Q Consensus       281 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~----------------------------~~~s~s~~~v~~dg  332 (361)
                      |+|..+++++.|+++++||+.++.....+..|...+..                            ++++++     .||
T Consensus       265 ~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs-----~Dg  339 (393)
T 4gq1_A          265 SDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHS-----QHG  339 (393)
T ss_dssp             TTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEET-----TTT
T ss_pred             CCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEEC-----CCC
Confidence            79999999999999999999988777666655544332                            567777     999


Q ss_pred             eEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         333 FQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       333 ~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      .|+||  |+.++    .++..+.+|..+|
T Consensus       340 ~V~lw--d~~~~----~~~~~~~~~~~~V  362 (393)
T 4gq1_A          340 LIQLI--NTYEK----DSNSIPIQLGMPI  362 (393)
T ss_dssp             EEEEE--ETTCT----TCCEEEEECSSCE
T ss_pred             EEEEE--ECCCC----cEEEEecCCCCcE
Confidence            99999  77333    3345566666543

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.93  E-value=1.7e-24  Score=199.33  Aligned_cols=199  Identities=15%  Similarity=0.206  Sum_probs=149.2

Q ss_pred             cceeeeEEe-eccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCC---Ce---EEEEEeCCCCCeEEEEEecCCCEEEE
Q psy8430         149 LSCYKIRSF-SGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQT---GK---CVLQYSGHSGSVNSVRFLPNKDLVLS  220 (361)
Q Consensus       149 ~~~~~~~~l-~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~---~~---~~~~~~~h~~~v~~v~~~~~~~~l~s  220 (361)
                      .+++++.++ .+|.+.|++++|+| ++.+|++|+.||+|++||+.+   +.   ....+ +|...|.+++|+|++..|++
T Consensus        50 ~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s  128 (437)
T 3gre_A           50 LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAV  128 (437)
T ss_dssp             CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEE
T ss_pred             ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEE
Confidence            456778888 89999999999999 999999999999999999876   32   33444 49999999999999999999


Q ss_pred             EECCCcEEEEecc---ccccccCCC-------------CCCCCC---------C-----CCCCC-CCce--ecccccEEE
Q psy8430         221 ASGDKSVHIWQAV---INWECLNND-------------NDSDLD---------E-----SKEPD-ESSI--TLRTPVKEL  267 (361)
Q Consensus       221 ~~~d~~i~lwd~~---~~~~~~~~~-------------~~~~~~---------~-----~~~~~-~~~~--~~~~~~~~~  267 (361)
                      ++.||.|++||+.   .+.......             ......         .     ..... ...+  ....++..+
T Consensus       129 ~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~  208 (437)
T 3gre_A          129 SSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQII  208 (437)
T ss_dssp             EETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred             EeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEE
Confidence            9999999999995   221111000             000000         0     00000 0011  122456667


Q ss_pred             eC--CCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee-cCCCCCeE------------EEEEcCCCcccCCC
Q psy8430         268 LG--HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT-GHDEEPHI------------LCVSSYYSKVSCDL  332 (361)
Q Consensus       268 ~~--~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~-~h~~~v~~------------~~~s~s~~~v~~dg  332 (361)
                      .+  |...|++++|+|++.+|++|+.||.|++||+++++++.++. .|...|.+            ++++++     .||
T Consensus       209 ~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~-----~dg  283 (437)
T 3gre_A          209 ENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGS-----SKT  283 (437)
T ss_dssp             ECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEES-----TTE
T ss_pred             ccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEc-----CCC
Confidence            77  88999999999999999999999999999999999999886 67666666            456666     999


Q ss_pred             eEEEEcCCCCCCCCcceeeeeeccccc
Q psy8430         333 FQRIQHLDCGTSENPIHSVCVFQDIQS  359 (361)
Q Consensus       333 ~i~iW~~d~~~~~~~~~~v~~~~~h~~  359 (361)
                      .|+||  |+   +. ..++..+.+|..
T Consensus       284 ~i~iw--d~---~~-~~~~~~~~~~~~  304 (437)
T 3gre_A          284 FLTIW--NF---VK-GHCQYAFINSDE  304 (437)
T ss_dssp             EEEEE--ET---TT-TEEEEEEESSSS
T ss_pred             cEEEE--Ec---CC-CcEEEEEEcCCC
Confidence            99999  77   43 566777887754

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.93  E-value=9.3e-24  Score=189.97  Aligned_cols=185  Identities=25%  Similarity=0.318  Sum_probs=155.9

Q ss_pred             eeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCe--EEEEEeCCCCCeEEE
Q psy8430         134 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPG--QPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSV  209 (361)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~--~~~l~s~s~d~~i~~wd~~~~~--~~~~~~~h~~~v~~v  209 (361)
                      .+..+..+..|.....+.+.+..+.+|.+.|++++|+++  +.+|++|+.||+|++||+.+++  .+..+.+|...|.++
T Consensus        28 ~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~  107 (379)
T 3jrp_A           28 TCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSV  107 (379)
T ss_dssp             EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred             EEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEE
Confidence            444556677777766788889999999999999999987  8999999999999999999986  778888899999999


Q ss_pred             EEecC--CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC------
Q psy8430         210 RFLPN--KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS------  281 (361)
Q Consensus       210 ~~~~~--~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------  281 (361)
                      +|+|+  +.+|++++.|+.|++||+.....                        .....+.+|...|.+++|+|      
T Consensus       108 ~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~------------------------~~~~~~~~~~~~v~~~~~~~~~~~~~  163 (379)
T 3jrp_A          108 QWAPHEYGPLLLVASSDGKVSVVEFKENGT------------------------TSPIIIDAHAIGVNSASWAPATIEED  163 (379)
T ss_dssp             EECCGGGCSEEEEEETTSEEEEEECCTTSC------------------------CCEEEEECCTTCEEEEEECCCC----
T ss_pred             EeCCCCCCCEEEEecCCCcEEEEecCCCCc------------------------eeeEEecCCCCceEEEEEcCcccccc
Confidence            99999  99999999999999999976521                        13446678999999999999      


Q ss_pred             -------CCCEEEEEeCCCcEEEeeCCCCe----EEEEeecCCCCCeEEEEEcC---CC---cccCCCeEEEEcCCCCCC
Q psy8430         282 -------DGEQVITASWDRVANLFDVETGT----ILQSLTGHDEEPHILCVSSY---YS---KVSCDLFQRIQHLDCGTS  344 (361)
Q Consensus       282 -------~~~~l~s~~~d~~v~iwd~~~~~----~~~~~~~h~~~v~~~~~s~s---~~---~v~~dg~i~iW~~d~~~~  344 (361)
                             ++.++++++.|+.|++||++++.    ++..+.+|...|.++.+++.   ..   ..+.||.|+||  |+.++
T Consensus       164 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iw--d~~~~  241 (379)
T 3jrp_A          164 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIW--TQDNE  241 (379)
T ss_dssp             ------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEE--EESST
T ss_pred             ccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEE--eCCCC
Confidence                   69999999999999999998754    55678889998888777654   12   23589999999  76443

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.93  E-value=1.3e-23  Score=189.01  Aligned_cols=178  Identities=16%  Similarity=0.146  Sum_probs=139.9

Q ss_pred             ccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE--EEeCCCCCeEEEEEec
Q psy8430         136 QTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL--QYSGHSGSVNSVRFLP  213 (361)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~--~~~~h~~~v~~v~~~~  213 (361)
                      ..+..+..|...  +++.+..+. |.+.|.+++|+|+|.+|++++.| .+++|+..++..+.  ...+|...|.+++|+|
T Consensus       154 ~~d~~i~iwd~~--~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fsp  229 (365)
T 4h5i_A          154 KVPAIMRIIDPS--DLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIA  229 (365)
T ss_dssp             CSSCEEEEEETT--TTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEE
T ss_pred             CCCCEEEEeECC--CCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcC
Confidence            344566666654  455566665 77889999999999999999855 56667766776543  3456889999999999


Q ss_pred             CCCEEEEEECCC----cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy8430         214 NKDLVLSASGDK----SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA  289 (361)
Q Consensus       214 ~~~~l~s~~~d~----~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~  289 (361)
                      ++..+++++.|+    .+++|++.....                      .......+.+|...|++++|+|+|++|++|
T Consensus       230 dg~~l~~~s~d~~~~~~i~~~~~~~~~~----------------------~~~~~~~~~~~~~~V~~~~~Spdg~~lasg  287 (365)
T 4h5i_A          230 DDTVLIAASLKKGKGIVLTKISIKSGNT----------------------SVLRSKQVTNRFKGITSMDVDMKGELAVLA  287 (365)
T ss_dssp             TTEEEEEEEESSSCCEEEEEEEEETTEE----------------------EEEEEEEEESSCSCEEEEEECTTSCEEEEE
T ss_pred             CCCEEEEEecCCcceeEEeeccccccee----------------------cceeeeeecCCCCCeEeEEECCCCCceEEE
Confidence            999999999887    578888754421                      112345678899999999999999999999


Q ss_pred             eCCCcEEEeeCCCCeEEEEe-ecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCC
Q psy8430         290 SWDRVANLFDVETGTILQSL-TGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDC  341 (361)
Q Consensus       290 ~~d~~v~iwd~~~~~~~~~~-~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~  341 (361)
                      +.|++|+|||+++++++.++ .+|...|+++.+++++.   +.+.|++||||  |+
T Consensus       288 s~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw--~i  341 (365)
T 4h5i_A          288 SNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHII--KL  341 (365)
T ss_dssp             ETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEE--EC
T ss_pred             cCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEE--Ec
Confidence            99999999999999999885 78999999965555422   23499999999  55

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.92  E-value=8.2e-24  Score=189.42  Aligned_cols=192  Identities=20%  Similarity=0.344  Sum_probs=150.4

Q ss_pred             eEEeeecCccceeeeEEeec-----cCCCeEEEEEcCC----CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEE
Q psy8430         140 IVSSFKTSLLSCYKIRSFSG-----HRDGVWDVAVRPG----QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR  210 (361)
Q Consensus       140 ~~~~~~~~~~~~~~~~~l~~-----h~~~V~~l~~~~~----~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~  210 (361)
                      .+..|....  ++.+..+..     |.+.|++++|+|+    +.+|++|+.||.|++||+.+++.+..+.+|...|.+++
T Consensus        45 ~v~vw~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~  122 (366)
T 3k26_A           45 RVTLYECHS--QGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELK  122 (366)
T ss_dssp             EEEEEEECG--GGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEE
T ss_pred             EEEEEEcCC--CcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEE
Confidence            455555543  233333433     6688999999998    67999999999999999999999999999999999999


Q ss_pred             Eec-CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE---eCCCCcEEEEEEcCCCCEE
Q psy8430         211 FLP-NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL---LGHSNVVIAADWLSDGEQV  286 (361)
Q Consensus       211 ~~~-~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l  286 (361)
                      |+| ++.+|++++.||.|++||++++.                          ....+   .+|...|.+++|+|++.++
T Consensus       123 ~~~~~~~~l~s~~~dg~i~iwd~~~~~--------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l  176 (366)
T 3k26_A          123 FHPRDPNLLLSVSKDHALRLWNIQTDT--------------------------LVAIFGGVEGHRDEVLSADYDLLGEKI  176 (366)
T ss_dssp             ECSSCTTEEEEEETTSCEEEEETTTTE--------------------------EEEEECSTTSCSSCEEEEEECTTSSEE
T ss_pred             ECCCCCCEEEEEeCCCeEEEEEeecCe--------------------------EEEEecccccccCceeEEEECCCCCEE
Confidence            999 89999999999999999997652                          34444   5799999999999999999


Q ss_pred             EEEeCCCcEEEeeCCCCeEEEEeec----------------------------CCCCCeEEEEEcCCC-cccCCCeEEEE
Q psy8430         287 ITASWDRVANLFDVETGTILQSLTG----------------------------HDEEPHILCVSSYYS-KVSCDLFQRIQ  337 (361)
Q Consensus       287 ~s~~~d~~v~iwd~~~~~~~~~~~~----------------------------h~~~v~~~~~s~s~~-~v~~dg~i~iW  337 (361)
                      ++++.||.|++||+++++.+..+..                            |...|.++.+++..+ ..+.||.|++|
T Consensus       177 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~w  256 (366)
T 3k26_A          177 MSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCW  256 (366)
T ss_dssp             EEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEE
T ss_pred             EEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEE
Confidence            9999999999999998766544433                            888888754443211 12389999999


Q ss_pred             cCCCCCCCC----------cceeeeeecccccCC
Q psy8430         338 HLDCGTSEN----------PIHSVCVFQDIQSTG  361 (361)
Q Consensus       338 ~~d~~~~~~----------~~~~v~~~~~h~~~~  361 (361)
                        |+.++..          ...++..+.+|...|
T Consensus       257 --d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  288 (366)
T 3k26_A          257 --KPGKMEDDIDKIKPSESNVTILGRFDYSQCDI  288 (366)
T ss_dssp             --EESSTTCCGGGCCTTCCCEEEEEEEECSSCCS
T ss_pred             --eCCCccccccccccCCcchheeccccccCCcE
Confidence              7744332          124577788887643

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.92  E-value=7.9e-24  Score=183.76  Aligned_cols=158  Identities=9%  Similarity=-0.024  Sum_probs=124.5

Q ss_pred             cceeeeEEeeccCCCeEEEEEcC---CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCC---CCeEEEEEecCCCEE----
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRP---GQPVLGSASADRTVRLWSTQTGKCVLQYSGHS---GSVNSVRFLPNKDLV----  218 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~---~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~---~~v~~v~~~~~~~~l----  218 (361)
                      .+++.+..+.+|...++.++|++   ++.+|++|+.|++|+|||+.+|+++.++.+|.   ..|.+++|+|+|.++    
T Consensus       166 ~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s  245 (356)
T 2w18_A          166 EDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLS  245 (356)
T ss_dssp             TTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC
T ss_pred             CCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEec
Confidence            44677788889999999999988   67899999999999999999999999998754   468888999999876    


Q ss_pred             --------EEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE-----eCCCCcEEEEEEcCCCCE
Q psy8430         219 --------LSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL-----LGHSNVVIAADWLSDGEQ  285 (361)
Q Consensus       219 --------~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~  285 (361)
                              ++|+.|++|++||+.++..+                          ..+     .+|...+.+..+  ++.+
T Consensus       246 ~~~~~w~laSGs~D~tIklWd~~tgk~l--------------------------~v~~~~~p~Gh~~~~lsg~~--sg~~  297 (356)
T 2w18_A          246 HPCAKESESLRSPVFQLIVINPKTTLSV--------------------------GVMLYCLPPGQAGRFLEGDV--KDHC  297 (356)
T ss_dssp             ------------CCEEEEEEETTTTEEE--------------------------EEEEECCCTTCCCCEEEEEE--ETTE
T ss_pred             cCCCcceeeccCCCcEEEEEECCCCEEE--------------------------EEEEeeccCCCcceeEcccc--CCCE
Confidence                    56888999999999876432                          121     356655555455  4889


Q ss_pred             EEEEeCCCcEEEeeCCCCeEEEEeecCCCCCe-E--------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         286 VITASWDRVANLFDVETGTILQSLTGHDEEPH-I--------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       286 l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~-~--------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      +++++.|++|+|||+.+|+++.++.+|...+. .        +++||+     .|++||||  |+
T Consensus       298 lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS-----~D~TIklW--d~  355 (356)
T 2w18_A          298 AAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQ-----KDGNIFVY--HY  355 (356)
T ss_dssp             EEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEEC-----TTSCEEEE--EE
T ss_pred             EEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEE-----CCCcEEEe--cC
Confidence            99999999999999999999999999876544 3        455555     99999999  64

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.92  E-value=2e-23  Score=186.98  Aligned_cols=172  Identities=16%  Similarity=0.218  Sum_probs=145.6

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd  231 (361)
                      .....+.+|.+.|++++|+|++.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||
T Consensus        23 ~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  102 (369)
T 3zwl_B           23 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWD  102 (369)
T ss_dssp             EEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred             cccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence            44566889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEeeCCCCe--
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-----RVANLFDVETGT--  304 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~--  304 (361)
                      +.++.                          ....+. +...+.+++|+|++.++++++.+     +.|++||+.++.  
T Consensus       103 ~~~~~--------------------------~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~  155 (369)
T 3zwl_B          103 VSNGQ--------------------------CVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSAT  155 (369)
T ss_dssp             TTTCC--------------------------EEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTT
T ss_pred             CCCCc--------------------------EEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccc
Confidence            97652                          344444 88899999999999999999999     999999998653  


Q ss_pred             ---------EEEEeecCCC--CCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430         305 ---------ILQSLTGHDE--EPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST  360 (361)
Q Consensus       305 ---------~~~~~~~h~~--~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~  360 (361)
                               .+..+..|..  .+.+        ++++++     .||.|++|  |+   +....++..+.+|...
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~dg~i~i~--d~---~~~~~~~~~~~~~~~~  220 (369)
T 3zwl_B          156 HELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGH-----KDGKISKY--DV---SNNYEYVDSIDLHEKS  220 (369)
T ss_dssp             CCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEE-----TTSEEEEE--ET---TTTTEEEEEEECCSSC
T ss_pred             eeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEc-----CCCEEEEE--EC---CCCcEeEEEEecCCCc
Confidence                     3445555555  5555        455555     89999999  88   4445677788888764

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.92  E-value=1.8e-23  Score=192.38  Aligned_cols=186  Identities=21%  Similarity=0.268  Sum_probs=152.0

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeE-------EEEEeCCCCCeEEEEEec-CCCEEEEE
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKC-------VLQYSGHSGSVNSVRFLP-NKDLVLSA  221 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~-------~~~~~~h~~~v~~v~~~~-~~~~l~s~  221 (361)
                      +..+..+.+|.+.|++++|+|++. +|++|+.||+|++||+..+..       ...+.+|...|.+++|+| ++.+|+++
T Consensus       171 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~  250 (430)
T 2xyi_A          171 CQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSV  250 (430)
T ss_dssp             CCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEE
T ss_pred             CCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEE
Confidence            678889999999999999999988 999999999999999987421       456778999999999999 77899999


Q ss_pred             ECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEeeC
Q psy8430         222 SGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITASWDRVANLFDV  300 (361)
Q Consensus       222 ~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~  300 (361)
                      +.||.|++||++++..                       ..+...+..|...|++++|+|++. ++++|+.||.|++||+
T Consensus       251 ~~dg~i~i~d~~~~~~-----------------------~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~  307 (430)
T 2xyi_A          251 ADDQKLMIWDTRNNNT-----------------------SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL  307 (430)
T ss_dssp             ETTSEEEEEETTCSCS-----------------------SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred             eCCCeEEEEECCCCCC-----------------------CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeC
Confidence            9999999999986421                       125667778999999999999987 6889999999999999


Q ss_pred             CC-CeEEEEeecCCCCCeEEEEEcCCC----cccCCCeEEEEcCCCCCCCC----------cceeeeeecccccCC
Q psy8430         301 ET-GTILQSLTGHDEEPHILCVSSYYS----KVSCDLFQRIQHLDCGTSEN----------PIHSVCVFQDIQSTG  361 (361)
Q Consensus       301 ~~-~~~~~~~~~h~~~v~~~~~s~s~~----~v~~dg~i~iW~~d~~~~~~----------~~~~v~~~~~h~~~~  361 (361)
                      ++ +.++..+.+|...|.++.+++...    ..+.||.|+||  |+.....          +..++..+.+|.+.|
T Consensus       308 ~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v  381 (430)
T 2xyi_A          308 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW--DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI  381 (430)
T ss_dssp             TCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEE--EGGGTTCCCCHHHHHHCCTTEEEECCCCSSCE
T ss_pred             CCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEE--eCCCCccccCccccccCCcceEEEcCCCCCCc
Confidence            98 577889999999999855554421    12389999999  6633211          125677888887643

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.92  E-value=8.7e-24  Score=189.27  Aligned_cols=140  Identities=23%  Similarity=0.347  Sum_probs=123.0

Q ss_pred             CccceeeeEEeeccCCCeEEEEEcCC---CCEEEEEeCCCcEEEEeCCC-CeEE-EEEeCCCCCeEEEEEecCCCEEEEE
Q psy8430         147 SLLSCYKIRSFSGHRDGVWDVAVRPG---QPVLGSASADRTVRLWSTQT-GKCV-LQYSGHSGSVNSVRFLPNKDLVLSA  221 (361)
Q Consensus       147 ~~~~~~~~~~l~~h~~~V~~l~~~~~---~~~l~s~s~d~~i~~wd~~~-~~~~-~~~~~h~~~v~~v~~~~~~~~l~s~  221 (361)
                      .....+.+..+.+|.+.|++++|+|+   |.+|++|+.||.|++||+.+ +..+ ..+.+|...|.+++|+|++++|+++
T Consensus        25 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~  104 (368)
T 3mmy_A           25 NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTA  104 (368)
T ss_dssp             SSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred             CCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEE
Confidence            33455677788899999999999998   69999999999999999987 5544 7788999999999999999999999


Q ss_pred             ECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEE--cCCCCEEEEEeCCCcEEEee
Q psy8430         222 SGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADW--LSDGEQVITASWDRVANLFD  299 (361)
Q Consensus       222 ~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~s~~~d~~v~iwd  299 (361)
                      +.||.|++||+.++                           ....+.+|...|.+++|  +|++.++++++.||.|++||
T Consensus       105 ~~dg~v~iwd~~~~---------------------------~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd  157 (368)
T 3mmy_A          105 SCDKTAKMWDLSSN---------------------------QAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWD  157 (368)
T ss_dssp             ETTSEEEEEETTTT---------------------------EEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEEC
T ss_pred             cCCCcEEEEEcCCC---------------------------CceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEE
Confidence            99999999999765                           23345679999999999  89999999999999999999


Q ss_pred             CCCCeEEEEeecCC
Q psy8430         300 VETGTILQSLTGHD  313 (361)
Q Consensus       300 ~~~~~~~~~~~~h~  313 (361)
                      +++++++..+..+.
T Consensus       158 ~~~~~~~~~~~~~~  171 (368)
T 3mmy_A          158 TRSSNPMMVLQLPE  171 (368)
T ss_dssp             SSCSSCSEEEECSS
T ss_pred             CCCCcEEEEEecCC
Confidence            99998887777554

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.92  E-value=3.3e-23  Score=187.34  Aligned_cols=183  Identities=9%  Similarity=0.019  Sum_probs=149.6

Q ss_pred             eeeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCC---CCCeE
Q psy8430         132 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGH---SGSVN  207 (361)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h---~~~v~  207 (361)
                      .+.+..+..+..|............+.+|.+.|.+++|+| ++.+|++++.|++|++||+.. ..+..+..+   ...|.
T Consensus        89 l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~  167 (383)
T 3ei3_B           89 VAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYC  167 (383)
T ss_dssp             EEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEE
T ss_pred             EEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeE
Confidence            3344555667777776665555555568999999999999 788999999999999999985 555566544   48899


Q ss_pred             EEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCC-EE
Q psy8430         208 SVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QV  286 (361)
Q Consensus       208 ~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l  286 (361)
                      +++|+|+++.|++++.|+.|++||++..                           ++..+.+|...|.+++|+|+++ ++
T Consensus       168 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~---------------------------~~~~~~~h~~~v~~~~~~~~~~~~l  220 (383)
T 3ei3_B          168 CVDVSVSRQMLATGDSTGRLLLLGLDGH---------------------------EIFKEKLHKAKVTHAEFNPRCDWLM  220 (383)
T ss_dssp             EEEEETTTTEEEEEETTSEEEEEETTSC---------------------------EEEEEECSSSCEEEEEECSSCTTEE
T ss_pred             EEEECCCCCEEEEECCCCCEEEEECCCC---------------------------EEEEeccCCCcEEEEEECCCCCCEE
Confidence            9999999999999999999999998422                           6778889999999999999999 99


Q ss_pred             EEEeCCCcEEEeeCCC----CeEEEEeecCCCCCeEEEEEc-CCC---cccCCCeEEEEcCCCCCCC
Q psy8430         287 ITASWDRVANLFDVET----GTILQSLTGHDEEPHILCVSS-YYS---KVSCDLFQRIQHLDCGTSE  345 (361)
Q Consensus       287 ~s~~~d~~v~iwd~~~----~~~~~~~~~h~~~v~~~~~s~-s~~---~v~~dg~i~iW~~d~~~~~  345 (361)
                      ++++.|+.|++||+++    +.++..+ +|...+.++.+++ ...   ..+.||.|++|  |+.++.
T Consensus       221 ~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iw--d~~~~~  284 (383)
T 3ei3_B          221 ATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVY--SSYDWS  284 (383)
T ss_dssp             EEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEE--ETTBTT
T ss_pred             EEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEE--ECCCCc
Confidence            9999999999999998    6677777 6889998877766 422   23589999999  774433

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.92  E-value=4.2e-23  Score=188.04  Aligned_cols=178  Identities=21%  Similarity=0.211  Sum_probs=143.4

Q ss_pred             ceeEEeeecCccce-----eeeEEeeccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCeEEEEE--eCCCCCeEEE
Q psy8430         138 SKIVSSFKTSLLSC-----YKIRSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQTGKCVLQY--SGHSGSVNSV  209 (361)
Q Consensus       138 ~~~~~~~~~~~~~~-----~~~~~l~~h~~~V~~l~~~~~~-~~l~s~s~d~~i~~wd~~~~~~~~~~--~~h~~~v~~v  209 (361)
                      +..+..|.......     +.+..+.+|.+.|++++|+|++ .+|++|+.|++|++||+.+++.+..+  .+|...|.++
T Consensus       103 dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~  182 (402)
T 2aq5_A          103 DCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSV  182 (402)
T ss_dssp             TSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEE
T ss_pred             CCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEE
Confidence            34455555544332     6688899999999999999998 69999999999999999999999999  7899999999


Q ss_pred             EEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCc-EEEEEEcCCCCEEE
Q psy8430         210 RFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNV-VIAADWLSDGEQVI  287 (361)
Q Consensus       210 ~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~  287 (361)
                      +|+|++.+|++++.||.|++||++++.                          .+..+ .+|.+. +.++.|+|++.+++
T Consensus       183 ~~~~~~~~l~~~~~d~~i~iwd~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~  236 (402)
T 2aq5_A          183 DWSRDGALICTSCRDKRVRVIEPRKGT--------------------------VVAEKDRPHEGTRPVHAVFVSEGKILT  236 (402)
T ss_dssp             EECTTSSCEEEEETTSEEEEEETTTTE--------------------------EEEEEECSSCSSSCCEEEECSTTEEEE
T ss_pred             EECCCCCEEEEEecCCcEEEEeCCCCc--------------------------eeeeeccCCCCCcceEEEEcCCCcEEE
Confidence            999999999999999999999997652                          45555 677765 89999999999999


Q ss_pred             EE---eCCCcEEEeeCCCCeE-EEEee-cCCCCCeEEEEEcCCC--cc--cCCCeEEEEcCCCCC
Q psy8430         288 TA---SWDRVANLFDVETGTI-LQSLT-GHDEEPHILCVSSYYS--KV--SCDLFQRIQHLDCGT  343 (361)
Q Consensus       288 s~---~~d~~v~iwd~~~~~~-~~~~~-~h~~~v~~~~~s~s~~--~v--~~dg~i~iW~~d~~~  343 (361)
                      +|   +.|+.|++||++++.. +.... .|...+.++.+++...  ++  +.||.|++|  |+.+
T Consensus       237 ~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~--d~~~  299 (402)
T 2aq5_A          237 TGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYF--EITS  299 (402)
T ss_dssp             EEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEE--EECS
T ss_pred             EeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEE--EecC
Confidence            99   7999999999998764 33333 4666677755554421  11  279999999  7744

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.92  E-value=9.3e-23  Score=186.95  Aligned_cols=155  Identities=21%  Similarity=0.281  Sum_probs=125.2

Q ss_pred             cceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC
Q psy8430         137 TSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD  216 (361)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~  216 (361)
                      .+..+..|.........+..+.+|...|++|+|+|+|.+|++|+.||+|++||+.+++.+..+.+|...|.++.|+  +.
T Consensus       123 ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~  200 (420)
T 4gga_A          123 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SY  200 (420)
T ss_dssp             ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TT
T ss_pred             eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CC
Confidence            3455666666554444444556788999999999999999999999999999999999999999999999998885  67


Q ss_pred             EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy8430         217 LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVAN  296 (361)
Q Consensus       217 ~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~  296 (361)
                      .+++|+.|+.+++||.....                         ..+..+.+|...+..+.|+|++.++++++.|+.++
T Consensus       201 ~l~sgs~d~~i~~~d~~~~~-------------------------~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~  255 (420)
T 4gga_A          201 ILSSGSRSGHIHHHDVRVAE-------------------------HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVN  255 (420)
T ss_dssp             EEEEEETTSEEEEEETTSSS-------------------------CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             EEEEEeCCCceeEeeecccc-------------------------eeeEEecccccceeeeeecCCCCeeeeeeccccce
Confidence            99999999999999986542                         25667788999999999999999999999888888


Q ss_pred             EeeCCCCe----EEEEeecCCCCCeE
Q psy8430         297 LFDVETGT----ILQSLTGHDEEPHI  318 (361)
Q Consensus       297 iwd~~~~~----~~~~~~~h~~~v~~  318 (361)
                      +||..+++    .+.....|...|.+
T Consensus       256 i~~~~~~~~~~~~~~~~~~~~~~V~~  281 (420)
T 4gga_A          256 VWPSAPGEGGWVPLQTFTQHQGAVKA  281 (420)
T ss_dssp             EEESSCCSSCSCCSEEECCCSSCEEE
T ss_pred             EEeeccccccceeeeeecccCCceee
Confidence            88887654    23444455555544

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.92  E-value=1.7e-23  Score=191.44  Aligned_cols=187  Identities=13%  Similarity=0.196  Sum_probs=147.0

Q ss_pred             eccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC
Q psy8430         135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN  214 (361)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~  214 (361)
                      +..+..+..|...  +.+....+..| ..+....|+|++.+|++|+.|+.|++||+.+++....+.+|...|.+++|+|+
T Consensus        74 ~~~d~~v~i~d~~--~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~  150 (420)
T 3vl1_A           74 ARLDGHDFLFNTI--IRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPS  150 (420)
T ss_dssp             EEETTEEEEEECC--SEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTT
T ss_pred             EEcCCcEEEEEec--ccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCC
Confidence            3334445555543  33444455566 44555578999999999999999999999999988888899999999999999


Q ss_pred             CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc
Q psy8430         215 KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRV  294 (361)
Q Consensus       215 ~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~  294 (361)
                      +++|++++.|+.|++||+.++                          .....+.+|...|.+++|+|++++|++++.|+.
T Consensus       151 ~~~l~s~s~d~~i~iwd~~~~--------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~  204 (420)
T 3vl1_A          151 GEALISSSQDMQLKIWSVKDG--------------------------SNPRTLIGHRATVTDIAIIDRGRNVLSASLDGT  204 (420)
T ss_dssp             SSEEEEEETTSEEEEEETTTC--------------------------CCCEEEECCSSCEEEEEEETTTTEEEEEETTSC
T ss_pred             CCEEEEEeCCCeEEEEeCCCC--------------------------cCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCc
Confidence            999999999999999999765                          256778899999999999999999999999999


Q ss_pred             EEEeeCCCCeEEEEeecCC---CCCeE-----------------------------EEEEcCCCcccCCCeEEEEcCCCC
Q psy8430         295 ANLFDVETGTILQSLTGHD---EEPHI-----------------------------LCVSSYYSKVSCDLFQRIQHLDCG  342 (361)
Q Consensus       295 v~iwd~~~~~~~~~~~~h~---~~v~~-----------------------------~~~s~s~~~v~~dg~i~iW~~d~~  342 (361)
                      |++||+++++++..+..|.   ..+.+                             ++++++     .||.|++|  |+ 
T Consensus       205 v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-----~dg~i~i~--d~-  276 (420)
T 3vl1_A          205 IRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGH-----VSGVITVH--NV-  276 (420)
T ss_dssp             EEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEE-----TTSCEEEE--ET-
T ss_pred             EEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEc-----CCCeEEEE--EC-
Confidence            9999999999999887542   22222                             566677     99999999  87 


Q ss_pred             CCCCcceeeeeecccccC
Q psy8430         343 TSENPIHSVCVFQDIQST  360 (361)
Q Consensus       343 ~~~~~~~~v~~~~~h~~~  360 (361)
                        +..........+|...
T Consensus       277 --~~~~~~~~~~~~~~~~  292 (420)
T 3vl1_A          277 --FSKEQTIQLPSKFTCS  292 (420)
T ss_dssp             --TTCCEEEEECCTTSSC
T ss_pred             --CCCceeEEcccccCCC
Confidence              3322233333456543

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.92  E-value=3.1e-23  Score=205.41  Aligned_cols=163  Identities=17%  Similarity=0.249  Sum_probs=146.7

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd  231 (361)
                      +..+.+.+|.+.|.+++|+|+|++|++|+.||+|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||
T Consensus         4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~   83 (814)
T 3mkq_A            4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN   83 (814)
T ss_dssp             CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred             ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence            45678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC-eEEEEee
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG-TILQSLT  310 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~-~~~~~~~  310 (361)
                      +.++                          .....+.+|...|.+++|+|+++++++++.||.|++||+.++ .....+.
T Consensus        84 ~~~~--------------------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~  137 (814)
T 3mkq_A           84 YNTG--------------------------EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE  137 (814)
T ss_dssp             TTTC--------------------------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEE
T ss_pred             CCCC--------------------------cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEc
Confidence            8765                          356778899999999999999999999999999999999987 7778889


Q ss_pred             cCCCCCeEEEEEc-C---CCcccCCCeEEEEcCCCC
Q psy8430         311 GHDEEPHILCVSS-Y---YSKVSCDLFQRIQHLDCG  342 (361)
Q Consensus       311 ~h~~~v~~~~~s~-s---~~~v~~dg~i~iW~~d~~  342 (361)
                      +|...+.++.+++ +   ....+.||.|++|  |+.
T Consensus       138 ~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vw--d~~  171 (814)
T 3mkq_A          138 GHEHFVMCVAFNPKDPSTFASGCLDRTVKVW--SLG  171 (814)
T ss_dssp             CCSSCEEEEEEETTEEEEEEEEETTSEEEEE--ETT
T ss_pred             CCCCcEEEEEEEcCCCCEEEEEeCCCeEEEE--ECC
Confidence            9999998876665 2   2233589999999  763

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.92  E-value=6e-25  Score=198.26  Aligned_cols=160  Identities=14%  Similarity=0.152  Sum_probs=130.0

Q ss_pred             eeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--eEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccc
Q psy8430         157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI  234 (361)
Q Consensus       157 l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~--~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~  234 (361)
                      ++.|.++|++++|+|++++|++|+.|++|++||+.++  +.+..+.+|...|.+++|+|++++|++++.|+.|++||+.+
T Consensus         7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~   86 (377)
T 3dwl_C            7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP   86 (377)
T ss_dssp             EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred             EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence            3457789999999999999999999999999999988  77888889999999999999999999999999999999976


Q ss_pred             cccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCe---EEEEeec
Q psy8430         235 NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT---ILQSLTG  311 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~---~~~~~~~  311 (361)
                      +.                       ...+...+.+|...|.+++|+|++++|++++.|+.|++||+++++   +...+..
T Consensus        87 ~~-----------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~  143 (377)
T 3dwl_C           87 DG-----------------------TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKR  143 (377)
T ss_dssp             -------------------------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECS
T ss_pred             CC-----------------------ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeec
Confidence            52                       012456677899999999999999999999999999999999887   4778887


Q ss_pred             -CCCCCeEEEEEcCCC---cccCCCeEEEEcCCC
Q psy8430         312 -HDEEPHILCVSSYYS---KVSCDLFQRIQHLDC  341 (361)
Q Consensus       312 -h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~  341 (361)
                       |...|.++.+++...   ..+.||.|++|  |+
T Consensus       144 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw--d~  175 (377)
T 3dwl_C          144 PLRSTILSLDWHPNNVLLAAGCADRKAYVL--SA  175 (377)
T ss_dssp             SCCSCEEEEEECTTSSEEEEEESSSCEEEE--EE
T ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCEEEEE--EE
Confidence             999999855544321   12399999999  65

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.92  E-value=5.9e-23  Score=189.14  Aligned_cols=186  Identities=24%  Similarity=0.351  Sum_probs=157.1

Q ss_pred             eeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec
Q psy8430         134 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP  213 (361)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~  213 (361)
                      .+..+..+..|..  .+++.+..+.+|.+.|++++|  ++.+|++|+.||+|++||+.+++.+..+.+|...|.+++|+ 
T Consensus       148 ~g~~dg~i~iwd~--~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~-  222 (435)
T 1p22_A          148 SGLRDNTIKIWDK--NTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN-  222 (435)
T ss_dssp             EEESSSCEEEEES--SSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC-
T ss_pred             EEeCCCeEEEEeC--CCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc-
Confidence            3344444555544  456788899999999999999  67899999999999999999999999999999999999996 


Q ss_pred             CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC
Q psy8430         214 NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR  293 (361)
Q Consensus       214 ~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~  293 (361)
                       +..+++|+.||.|++||+.++...                       .....+.+|...|.+++|  +++++++|+.||
T Consensus       223 -~~~l~s~s~dg~i~vwd~~~~~~~-----------------------~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg  276 (435)
T 1p22_A          223 -NGMMVTCSKDRSIAVWDMASPTDI-----------------------TLRRVLVGHRAAVNVVDF--DDKYIVSASGDR  276 (435)
T ss_dssp             -TTEEEEEETTSCEEEEECSSSSCC-----------------------EEEEEECCCSSCEEEEEE--ETTEEEEEETTS
T ss_pred             -CCEEEEeeCCCcEEEEeCCCCCCc-----------------------eeeeEecCCCCcEEEEEe--CCCEEEEEeCCC
Confidence             459999999999999999765221                       123667889999999999  789999999999


Q ss_pred             cEEEeeCCCCeEEEEeecCCCCCeE------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         294 VANLFDVETGTILQSLTGHDEEPHI------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       294 ~v~iwd~~~~~~~~~~~~h~~~v~~------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      .|++||+++++++..+.+|...+.+      ++++++     .||.|++|  |+   +. ..++..+.+|.+.|
T Consensus       277 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~-----~dg~i~iw--d~---~~-~~~~~~~~~h~~~v  339 (435)
T 1p22_A          277 TIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGS-----SDNTIRLW--DI---EC-GACLRVLEGHEELV  339 (435)
T ss_dssp             EEEEEETTTCCEEEEEECCSSCEEEEEEETTEEEEEE-----TTSCEEEE--ET---TT-CCEEEEECCCSSCE
T ss_pred             eEEEEECCcCcEEEEEcCCCCcEEEEEeCCCEEEEEe-----CCCeEEEE--EC---CC-CCEEEEEeCCcCcE
Confidence            9999999999999999999999988      455666     99999999  87   33 56788899998753

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.92  E-value=2.2e-23  Score=186.57  Aligned_cols=212  Identities=16%  Similarity=0.193  Sum_probs=157.6

Q ss_pred             eccceeEEeeecCccceeeeEEeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEE---eCCCCCeEEEE
Q psy8430         135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQY---SGHSGSVNSVR  210 (361)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~---~~h~~~v~~v~  210 (361)
                      +..+..+..|..  .+++.+..+.+|.+.|++++|+| ++.+|++|+.||+|++||+.+++.+..+   .+|...|.+++
T Consensus        91 ~~~dg~i~v~d~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~  168 (366)
T 3k26_A           91 AGSRGIIRIINP--ITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSAD  168 (366)
T ss_dssp             EETTCEEEEECT--TTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEE
T ss_pred             ecCCCEEEEEEc--hhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEE
Confidence            334444555544  45677888999999999999999 9999999999999999999999999888   68999999999


Q ss_pred             EecCCCEEEEEECCCcEEEEeccccccccCCCCC--CCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEE
Q psy8430         211 FLPNKDLVLSASGDKSVHIWQAVINWECLNNDND--SDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT  288 (361)
Q Consensus       211 ~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s  288 (361)
                      |+|++..|++++.||.|++||++++.........  ........................+|...|.+++|+  +.++++
T Consensus       169 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~  246 (366)
T 3k26_A          169 YDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILS  246 (366)
T ss_dssp             ECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEE
T ss_pred             ECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEE
Confidence            9999999999999999999999876443211000  000000000000111112334455699999999998  789999


Q ss_pred             EeCCCcEEEeeCCCCeE--------------EEEeecCCCCCeE----------EEEEcCCCcccCCCeEEEEcCCCCCC
Q psy8430         289 ASWDRVANLFDVETGTI--------------LQSLTGHDEEPHI----------LCVSSYYSKVSCDLFQRIQHLDCGTS  344 (361)
Q Consensus       289 ~~~d~~v~iwd~~~~~~--------------~~~~~~h~~~v~~----------~~~s~s~~~v~~dg~i~iW~~d~~~~  344 (361)
                      ++.|+.|++||++++..              +..+..|...+.+          ++++++     .||.|++|  |+.++
T Consensus       247 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~-----~dg~i~vw--d~~~~  319 (366)
T 3k26_A          247 KSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGN-----QVGKLYVW--DLEVE  319 (366)
T ss_dssp             ECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEEC-----TTSCEEEE--ECCSS
T ss_pred             EecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEe-----cCCcEEEE--ECCCC
Confidence            99999999999987744              7888888887765          455566     99999999  77554


Q ss_pred             CCcceeeeeeccc
Q psy8430         345 ENPIHSVCVFQDI  357 (361)
Q Consensus       345 ~~~~~~v~~~~~h  357 (361)
                      +........+.+|
T Consensus       320 ~~~~~~~~~~~~~  332 (366)
T 3k26_A          320 DPHKAKCTTLTHH  332 (366)
T ss_dssp             SGGGCEEEEECCT
T ss_pred             CCccccceEEccc
Confidence            4333356678887

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.92  E-value=2.1e-22  Score=183.51  Aligned_cols=177  Identities=18%  Similarity=0.209  Sum_probs=148.6

Q ss_pred             eccceeEEeeecCccceeeeEEeec-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec
Q psy8430         135 VQTSKIVSSFKTSLLSCYKIRSFSG-HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP  213 (361)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~l~~-h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~  213 (361)
                      +..+..+..|...  +++....+.. |.+.|++++|+|++.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+ 
T Consensus       109 ~~~d~~v~lw~~~--~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~-  185 (401)
T 4aez_A          109 VALERNVYVWNAD--SGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN-  185 (401)
T ss_dssp             EEETTEEEEEETT--TCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE-
T ss_pred             EECCCeEEEeeCC--CCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC-
Confidence            3334445555554  3444555554 89999999999999999999999999999999999999999999999999994 


Q ss_pred             CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC
Q psy8430         214 NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR  293 (361)
Q Consensus       214 ~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~  293 (361)
                       ++.+++++.||.|++||++...                         .....+.+|...|.+++|+|++.++++|+.|+
T Consensus       186 -~~~l~~~~~dg~i~i~d~~~~~-------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~  239 (401)
T 4aez_A          186 -RHVLSSGSRSGAIHHHDVRIAN-------------------------HQIGTLQGHSSEVCGLAWRSDGLQLASGGNDN  239 (401)
T ss_dssp             -TTEEEEEETTSEEEEEETTSSS-------------------------CEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             -CCEEEEEcCCCCEEEEecccCc-------------------------ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC
Confidence             6799999999999999987431                         25677889999999999999999999999999


Q ss_pred             cEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---ccc---CCCeEEEEcCCCC
Q psy8430         294 VANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVS---CDLFQRIQHLDCG  342 (361)
Q Consensus       294 ~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~---~dg~i~iW~~d~~  342 (361)
                      .|++||+++++++..+..|...|.++.+++...   ..+   .||.|++|  |+.
T Consensus       240 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~--d~~  292 (401)
T 4aez_A          240 VVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFW--NAA  292 (401)
T ss_dssp             CEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEE--ETT
T ss_pred             eEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEE--ECC
Confidence            999999999999999999999999977766421   111   69999999  773

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.92  E-value=5.1e-23  Score=203.87  Aligned_cols=192  Identities=21%  Similarity=0.258  Sum_probs=160.2

Q ss_pred             ccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCC
Q psy8430         136 QTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK  215 (361)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~  215 (361)
                      ..+..+..|..  .++..+..+.+|.++|++++|+|++++|++|+.||.|++||+.+++.+..+.+|.+.|.+++|+|++
T Consensus        32 ~~~g~v~iwd~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~  109 (814)
T 3mkq_A           32 LYSGRVEIWNY--ETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK  109 (814)
T ss_dssp             ETTSEEEEEET--TTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS
T ss_pred             eCCCEEEEEEC--CCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCC
Confidence            33445555654  4567888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCc
Q psy8430         216 DLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRV  294 (361)
Q Consensus       216 ~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~  294 (361)
                      +.|++++.||.|++||+.++.                         .....+.+|...|.+++|+| ++.++++++.||.
T Consensus       110 ~~l~~~~~dg~i~vw~~~~~~-------------------------~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~  164 (814)
T 3mkq_A          110 PYVLSGSDDLTVKLWNWENNW-------------------------ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRT  164 (814)
T ss_dssp             SEEEEEETTSEEEEEEGGGTS-------------------------EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE
T ss_pred             CEEEEEcCCCEEEEEECCCCc-------------------------eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCe
Confidence            999999999999999987542                         25667789999999999999 8999999999999


Q ss_pred             EEEeeCCCCeEEEEeecCC-CCCeEEEEEc--CCC---cccCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430         295 ANLFDVETGTILQSLTGHD-EEPHILCVSS--YYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST  360 (361)
Q Consensus       295 v~iwd~~~~~~~~~~~~h~-~~v~~~~~s~--s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~  360 (361)
                      |++||+.++.....+..+. ..+..+.+++  ...   ..+.||.|++|  |.   +. ..++..+.+|...
T Consensus       165 v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~--d~---~~-~~~~~~~~~~~~~  230 (814)
T 3mkq_A          165 VKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIW--DY---QT-KSCVATLEGHMSN  230 (814)
T ss_dssp             EEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEE--ET---TT-TEEEEEEECCSSC
T ss_pred             EEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEE--EC---CC-CcEEEEEcCCCCC
Confidence            9999999888888777654 6676654443  211   12389999999  77   33 4567888888764

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.91  E-value=1.4e-23  Score=193.61  Aligned_cols=173  Identities=11%  Similarity=0.084  Sum_probs=133.6

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCC-----CeEEEEEecCCCEEEEEECCCcEEEEecc
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG-----SVNSVRFLPNKDLVLSASGDKSVHIWQAV  233 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~-----~v~~v~~~~~~~~l~s~~~d~~i~lwd~~  233 (361)
                      +|...|++++|+|+|..||+++.||+|++||...  .+..+. |..     .|.+++|+|+|++|++|+.||+|++||+.
T Consensus        83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~  159 (588)
T 2j04_A           83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR  159 (588)
T ss_dssp             SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred             CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence            5688999999999999999999999999999644  666666 665     49999999999999999999999999987


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCceecccccEEE----eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE---E
Q psy8430         234 INWECLNNDNDSDLDESKEPDESSITLRTPVKEL----LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI---L  306 (361)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~---~  306 (361)
                      .+....                   ...-.+..+    .+|.+.|.+++|+|+|  +++++.|++|++||+..+..   .
T Consensus       160 ~~~l~~-------------------~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~  218 (588)
T 2j04_A          160 KNSENT-------------------PEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVS  218 (588)
T ss_dssp             CCTTTC-------------------CCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCE
T ss_pred             CCcccc-------------------ccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccce
Confidence            652100                   000023554    5678899999999999  88999999999999998773   3


Q ss_pred             EEee-cCCCCCeEEEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         307 QSLT-GHDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       307 ~~~~-~h~~~v~~~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      +++. +|...|.++.+++..+..+.|+.|++|  |+   .. ........||.+.|
T Consensus       219 ~tL~~~h~~~V~svaFsg~~LASa~~~tIkLW--d~---~~-~~~~~~~~gh~~~V  268 (588)
T 2j04_A          219 RMIQNASRRKITDLKIVDYKVVLTCPGYVHKI--DL---KN-YSISSLKTGSLENF  268 (588)
T ss_dssp             EEEECCCSSCCCCEEEETTEEEEECSSEEEEE--ET---TT-TEEEEEECSCCSCC
T ss_pred             eeecccccCcEEEEEEECCEEEEEeCCeEEEE--EC---CC-CeEEEEEcCCCceE
Confidence            5674 788889887777444445568999999  76   33 23322222788754

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.91  E-value=9.1e-24  Score=207.48  Aligned_cols=182  Identities=17%  Similarity=0.206  Sum_probs=149.1

Q ss_pred             eEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC--CCeEEEEEeCCCCCeEEEEEecC--CCEEEEEECCCcEEE
Q psy8430         154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ--TGKCVLQYSGHSGSVNSVRFLPN--KDLVLSASGDKSVHI  229 (361)
Q Consensus       154 ~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~--~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~~~d~~i~l  229 (361)
                      +..+.+|.+.|++++|+|+|++|++|+.||+|++||+.  +++.+..+.+|.+.|.+++|+|+  ++.|++|+.||.|++
T Consensus         2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v   81 (753)
T 3jro_A            2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI   81 (753)
T ss_dssp             ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred             eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence            35678999999999999999999999999999999998  45778889999999999999987  999999999999999


Q ss_pred             EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCcEEEeeCCCC--eE
Q psy8430         230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVETG--TI  305 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~--~~  305 (361)
                      ||+.++..                        .....+.+|...|.+++|+|+  +.++++|+.||.|++||++++  ..
T Consensus        82 wd~~~~~~------------------------~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~  137 (753)
T 3jro_A           82 WKEENGRW------------------------SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS  137 (753)
T ss_dssp             EEEETTEE------------------------EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCC
T ss_pred             EECCCCcc------------------------cccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcc
Confidence            99876521                        256677889999999999999  999999999999999999987  34


Q ss_pred             EEEeecCCCCCeEEEEEcC----------------CCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         306 LQSLTGHDEEPHILCVSSY----------------YSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       306 ~~~~~~h~~~v~~~~~s~s----------------~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      ...+.+|...|.++.+++.                ....+.||.|++|  |++++.....++..+.+|.+.|
T Consensus       138 ~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iw--d~~~~~~~~~~~~~~~~h~~~V  207 (753)
T 3jro_A          138 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIW--KYNSDAQTYVLESTLEGHSDWV  207 (753)
T ss_dssp             CEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEE--EEETTTTEEEEEEEECCCSSCE
T ss_pred             eeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEE--eccCCcccceeeeeecCCCCcE
Confidence            4566788888888766651                1123589999999  8865555457788889998754

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.91  E-value=5.1e-23  Score=183.52  Aligned_cols=182  Identities=8%  Similarity=-0.016  Sum_probs=133.8

Q ss_pred             eeeccceeEEeeecCc-------cceeeeEEee-ccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCeEEEEEe-C
Q psy8430         133 LKVQTSKIVSSFKTSL-------LSCYKIRSFS-GHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTGKCVLQYS-G  201 (361)
Q Consensus       133 ~~~~~~~~~~~~~~~~-------~~~~~~~~l~-~h~~~V~~l~~~~--~~~~l~s~s~d~~i~~wd~~~~~~~~~~~-~  201 (361)
                      +.+..+..+..|....       ...+.++.+. +|.+.|.+++|+|  ++.+|++|+.|++|++||+.+++...... .
T Consensus        89 ~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~  168 (343)
T 3lrv_A           89 ISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAK  168 (343)
T ss_dssp             EEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCC
T ss_pred             EEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecC
Confidence            3344445555554332       2334344444 7889999999999  99999999999999999999998877664 3


Q ss_pred             CCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC-CCCcEEEEEEc
Q psy8430         202 HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWL  280 (361)
Q Consensus       202 h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~  280 (361)
                      |...|.+++|+|++.+|++|+.||.|++||++++..                         ....+.+ |..+|.+++|+
T Consensus       169 ~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~-------------------------~~~~~~~~h~~~v~~l~fs  223 (343)
T 3lrv_A          169 SDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQ-------------------------ASSRFPVDEEAKIKEVKFA  223 (343)
T ss_dssp             SSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTS-------------------------CCEECCCCTTSCEEEEEEC
T ss_pred             CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCC-------------------------CccEEeccCCCCEEEEEEe
Confidence            556899999999999999999999999999987632                         1245666 99999999999


Q ss_pred             CCCCEEEEEeCCCcEEEeeCCCCeEEEEeec---CCCCCe--EEEEEcCCCc--c-cC-CCeEEEEcCCCC
Q psy8430         281 SDGEQVITASWDRVANLFDVETGTILQSLTG---HDEEPH--ILCVSSYYSK--V-SC-DLFQRIQHLDCG  342 (361)
Q Consensus       281 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~---h~~~v~--~~~~s~s~~~--v-~~-dg~i~iW~~d~~  342 (361)
                      |+|.+|++++ |+.|++||+++++++.++..   |...+.  ++.+++++.+  + +. |+.|+||  ++.
T Consensus       224 ~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~--~~~  291 (343)
T 3lrv_A          224 DNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIY--KFD  291 (343)
T ss_dssp             TTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEE--EEC
T ss_pred             CCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEE--EEc
Confidence            9999999999 55999999999877665543   333333  2344433221  1 15 9999999  553

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.91  E-value=4.6e-24  Score=200.07  Aligned_cols=158  Identities=10%  Similarity=-0.033  Sum_probs=133.2

Q ss_pred             eEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-eEEEEEeCCCCCeEEE--EEecCC-CEEEEEECCCcEEE
Q psy8430         154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-KCVLQYSGHSGSVNSV--RFLPNK-DLVLSASGDKSVHI  229 (361)
Q Consensus       154 ~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~-~~~~~~~~h~~~v~~v--~~~~~~-~~l~s~~~d~~i~l  229 (361)
                      ..++.+|.+.|++++|++++ .|++|+.||+|++||+.++ .+...+.+|...|.+|  +|+|++ .+|+||+.|++|+|
T Consensus       259 ~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvkl  337 (524)
T 2j04_B          259 SLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYI  337 (524)
T ss_dssp             SEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEE
T ss_pred             eEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEE
Confidence            45788999999999999865 8999999999999999876 4456688999999999  567887 89999999999999


Q ss_pred             EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCC--cEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEE
Q psy8430         230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSN--VVIAADWLSDGEQVITASWDRVANLFDVETGTILQ  307 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~  307 (361)
                      ||++++.                          +...+.+|..  .|.+++|+|++..+++++.|++|++||++++.++.
T Consensus       338 WD~~~~~--------------------------~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~  391 (524)
T 2j04_B          338 FNPKDIA--------------------------TTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVH  391 (524)
T ss_dssp             ECGGGHH--------------------------HHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCE
T ss_pred             EECCCCC--------------------------cccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccce
Confidence            9998653                          3344555543  57899999999999999999999999999999989


Q ss_pred             EeecCCCCCeEEEEEcCCC---cccCCCeEEEEc
Q psy8430         308 SLTGHDEEPHILCVSSYYS---KVSCDLFQRIQH  338 (361)
Q Consensus       308 ~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~  338 (361)
                      ++.+|.+.|.++.+++.+.   +.+.||+|+|||
T Consensus       392 ~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd  425 (524)
T 2j04_B          392 PLVSRETTITAIGVSRLHPMVLAGSADGSLIITN  425 (524)
T ss_dssp             EEEECSSCEEEEECCSSCCBCEEEETTTEEECCB
T ss_pred             eeecCCCceEEEEeCCCCCeEEEEECCCEEEEEe
Confidence            9999999999966655422   224899999993

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.91  E-value=3.5e-22  Score=175.45  Aligned_cols=141  Identities=21%  Similarity=0.294  Sum_probs=119.9

Q ss_pred             cceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC
Q psy8430         137 TSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD  216 (361)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~  216 (361)
                      .+..+..|...+........+.+|...|++++|+|++++|++|+.||+|++||+.+++.+..+.+|...+.++.+  ++.
T Consensus        43 ~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~  120 (318)
T 4ggc_A           43 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSY  120 (318)
T ss_dssp             ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETT
T ss_pred             eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCC
Confidence            455667776654444444445578899999999999999999999999999999999999999999998887655  567


Q ss_pred             EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy8430         217 LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVAN  296 (361)
Q Consensus       217 ~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~  296 (361)
                      .+++++.++.+++|+.....                         .....+.+|...+..+.++++++++++++.|+.|+
T Consensus       121 ~l~s~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~  175 (318)
T 4ggc_A          121 ILSSGSRSGHIHHHDVRVAE-------------------------HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVN  175 (318)
T ss_dssp             EEEEEETTSEEEEEETTSSS-------------------------CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             EEEEEecCCceEeeecCCCc-------------------------eeEEEEcCccCceEEEEEcCCCCEEEEEecCccee
Confidence            99999999999999976542                         25677889999999999999999999999999999


Q ss_pred             EeeCCCCe
Q psy8430         297 LFDVETGT  304 (361)
Q Consensus       297 iwd~~~~~  304 (361)
                      +||+++++
T Consensus       176 iwd~~~~~  183 (318)
T 4ggc_A          176 VWPSAPGE  183 (318)
T ss_dssp             EEESSCBT
T ss_pred             EEECCCCc
Confidence            99998764

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.91  E-value=5.6e-23  Score=201.87  Aligned_cols=187  Identities=25%  Similarity=0.308  Sum_probs=158.9

Q ss_pred             eeeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCe--EEEEEeCCCCCeE
Q psy8430         132 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPG--QPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVN  207 (361)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~--~~~l~s~s~d~~i~~wd~~~~~--~~~~~~~h~~~v~  207 (361)
                      ...+..+..+..|.....+++.+..+.+|.++|++++|+|+  +++|++|+.||+|++||+.+++  .+..+.+|...|.
T Consensus        24 latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~  103 (753)
T 3jro_A           24 LATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVN  103 (753)
T ss_dssp             EEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE
T ss_pred             EEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeE
Confidence            34455567777888776788899999999999999999988  9999999999999999999886  7778889999999


Q ss_pred             EEEEecC--CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC----
Q psy8430         208 SVRFLPN--KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS----  281 (361)
Q Consensus       208 ~v~~~~~--~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----  281 (361)
                      +++|+|+  +..+++|+.||.|++||++.+..                        .....+.+|...|.+++|+|    
T Consensus       104 ~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~------------------------~~~~~~~~~~~~v~~l~~~p~~~~  159 (753)
T 3jro_A          104 SVQWAPHEYGPLLLVASSDGKVSVVEFKENGT------------------------TSPIIIDAHAIGVNSASWAPATIE  159 (753)
T ss_dssp             EEEECCGGGCSEEEEEETTSEEEEEECCSSSC------------------------CCCEEEECCSSCEEEEEECCCC--
T ss_pred             EEEECCCCCCCEEEEEeCCCcEEEEEeecCCC------------------------cceeEeecCCCceEEEEecCcccc
Confidence            9999999  99999999999999999976522                        13456678999999999999    


Q ss_pred             ---------CCCEEEEEeCCCcEEEeeCCCC----eEEEEeecCCCCCeEEEEEcC---CC---cccCCCeEEEEcCCCC
Q psy8430         282 ---------DGEQVITASWDRVANLFDVETG----TILQSLTGHDEEPHILCVSSY---YS---KVSCDLFQRIQHLDCG  342 (361)
Q Consensus       282 ---------~~~~l~s~~~d~~v~iwd~~~~----~~~~~~~~h~~~v~~~~~s~s---~~---~v~~dg~i~iW~~d~~  342 (361)
                               ++.++++|+.||.|++||++++    .+...+.+|...|.++.+++.   +.   ..+.||.|++|  |+.
T Consensus       160 ~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iw--d~~  237 (753)
T 3jro_A          160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIW--TQD  237 (753)
T ss_dssp             -------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEE--EES
T ss_pred             cccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEe--cCC
Confidence                     5899999999999999999877    667788899999988776654   11   23589999999  764


Q ss_pred             CC
Q psy8430         343 TS  344 (361)
Q Consensus       343 ~~  344 (361)
                      ++
T Consensus       238 ~~  239 (753)
T 3jro_A          238 NE  239 (753)
T ss_dssp             SS
T ss_pred             CC
Confidence            43

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.91  E-value=4.4e-22  Score=176.08  Aligned_cols=179  Identities=12%  Similarity=0.153  Sum_probs=148.6

Q ss_pred             eccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC
Q psy8430         135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN  214 (361)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~  214 (361)
                      +..+..+..|............+.+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|+
T Consensus       115 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~  194 (337)
T 1gxr_A          115 GGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISND  194 (337)
T ss_dssp             EESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred             EcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCC
Confidence            34445566676666666678889999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc
Q psy8430         215 KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRV  294 (361)
Q Consensus       215 ~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~  294 (361)
                      ++.+++++.||.|++||++++.                          ....+ .+...+.+++|+|+++++++++.|+.
T Consensus       195 ~~~l~~~~~dg~i~~~d~~~~~--------------------------~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~  247 (337)
T 1gxr_A          195 GTKLWTGGLDNTVRSWDLREGR--------------------------QLQQH-DFTSQIFSLGYCPTGEWLAVGMESSN  247 (337)
T ss_dssp             SSEEEEEETTSEEEEEETTTTE--------------------------EEEEE-ECSSCEEEEEECTTSSEEEEEETTSC
T ss_pred             CCEEEEEecCCcEEEEECCCCc--------------------------eEeee-cCCCceEEEEECCCCCEEEEEcCCCc
Confidence            9999999999999999997652                          22233 47788999999999999999999999


Q ss_pred             EEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCC
Q psy8430         295 ANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGT  343 (361)
Q Consensus       295 v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~  343 (361)
                      |++||+++++.. .+..|...+.++.+++...   ..+.||.|++|  |+.+
T Consensus       248 i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~--~~~~  296 (337)
T 1gxr_A          248 VEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAW--RTPY  296 (337)
T ss_dssp             EEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEE--ETTT
T ss_pred             EEEEECCCCCeE-EEcCCccceeEEEECCCCCEEEEecCCCcEEEE--ECCC
Confidence            999999988754 5677888888855554321   12389999999  6633

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.91  E-value=6.7e-23  Score=184.08  Aligned_cols=196  Identities=14%  Similarity=0.076  Sum_probs=151.6

Q ss_pred             ceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE---EEEE-eCCCCCeEEEEEec
Q psy8430         138 SKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC---VLQY-SGHSGSVNSVRFLP  213 (361)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~---~~~~-~~h~~~v~~v~~~~  213 (361)
                      +..+..|............+.+|...|.+++|+|++.+|++|+.|+.|++||+..+..   ...+ .+|...|.+++|+|
T Consensus        73 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~  152 (372)
T 1k8k_C           73 DRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP  152 (372)
T ss_dssp             TSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT
T ss_pred             CCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC
Confidence            3445555554444445556678999999999999999999999999999999987752   3333 57899999999999


Q ss_pred             CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC
Q psy8430         214 NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR  293 (361)
Q Consensus       214 ~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~  293 (361)
                      ++++|++++.||.|++||++.........        ............+...+.+|...|.+++|+|++.+|++++.|+
T Consensus       153 ~~~~l~~~~~dg~i~~~d~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  224 (372)
T 1k8k_C          153 NSVLLAAGSCDFKCRIFSAYIKEVEERPA--------PTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS  224 (372)
T ss_dssp             TSSEEEEEETTSCEEEEECCCTTTSCCCC--------CBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTT
T ss_pred             CCCEEEEEcCCCCEEEEEccccccccccc--------ccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCC
Confidence            99999999999999999986432110000        0000000122346677778999999999999999999999999


Q ss_pred             cEEEeeCCCCeEEEEeecCCCCCeEEEEEcC--CCcccCCCeEEEEcCCCCC
Q psy8430         294 VANLFDVETGTILQSLTGHDEEPHILCVSSY--YSKVSCDLFQRIQHLDCGT  343 (361)
Q Consensus       294 ~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s--~~~v~~dg~i~iW~~d~~~  343 (361)
                      .|++||+++++++..+..|...+.++.++..  ++..+.||.|++|  |+.+
T Consensus       225 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~--~~~~  274 (372)
T 1k8k_C          225 TVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLF--TYDS  274 (372)
T ss_dssp             EEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEE--EEET
T ss_pred             EEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEE--EccC
Confidence            9999999999999999999999999777765  3344689999999  6633

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.91  E-value=3.2e-22  Score=182.63  Aligned_cols=182  Identities=21%  Similarity=0.316  Sum_probs=144.0

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe----------------------------
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS----------------------------  200 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~----------------------------  200 (361)
                      .++..+..+.+|.+.|.+++|+|++.+|++++.|+.|++||+.+++.+..+.                            
T Consensus       137 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (425)
T 1r5m_A          137 KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD  216 (425)
T ss_dssp             TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEE
T ss_pred             CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcC
Confidence            4567888899999999999999999999999999999999998876655443                            


Q ss_pred             ----------------------------CCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCC
Q psy8430         201 ----------------------------GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKE  252 (361)
Q Consensus       201 ----------------------------~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~  252 (361)
                                                  +|...|.+++|+|++++|++++.|+.|++||+.++                 
T Consensus       217 ~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-----------------  279 (425)
T 1r5m_A          217 DDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG-----------------  279 (425)
T ss_dssp             TTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB-----------------
T ss_pred             CCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC-----------------
Confidence                                        45666777777777777777777777777776543                 


Q ss_pred             CCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---ccc
Q psy8430         253 PDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVS  329 (361)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~  329 (361)
                               .+...+.+|...|.+++|+|++ ++++++.|+.|++||+++++++..+..|...+.++.+++...   ..+
T Consensus       280 ---------~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  349 (425)
T 1r5m_A          280 ---------NSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAF  349 (425)
T ss_dssp             ---------SCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEE
T ss_pred             ---------ccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEE
Confidence                     3567777899999999999999 999999999999999999999999999999998855544321   123


Q ss_pred             CCCeEEEEcCCCCCCCC----------------cceeeeeeccccc
Q psy8430         330 CDLFQRIQHLDCGTSEN----------------PIHSVCVFQDIQS  359 (361)
Q Consensus       330 ~dg~i~iW~~d~~~~~~----------------~~~~v~~~~~h~~  359 (361)
                      .||.|++|  |+.++..                +..++..+.+|..
T Consensus       350 ~dg~i~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (425)
T 1r5m_A          350 MDGQVNVY--DLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQD  393 (425)
T ss_dssp             TTSCEEEE--ECHHHHC--------------CEECCEEEEECCTTC
T ss_pred             CCCeEEEE--ECCCCccceeeeecccccccCcccchhhhhhcCccc
Confidence            89999999  7633220                0127888888854

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.91  E-value=1.5e-22  Score=187.84  Aligned_cols=169  Identities=19%  Similarity=0.328  Sum_probs=144.6

Q ss_pred             eeEEeeccCCCe-EEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430         153 KIRSFSGHRDGV-WDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       153 ~~~~l~~h~~~V-~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd  231 (361)
                      ....+.+|.+.| .++.+  ++++|++|+.||+|++||+.+++.+..+.+|.+.|.+++|+|++ .+++|+.||+|++||
T Consensus       113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd  189 (464)
T 3v7d_B          113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWD  189 (464)
T ss_dssp             EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEE
T ss_pred             ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEE
Confidence            345788999885 56666  46799999999999999999999999999999999999999987 999999999999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEc--CCCCEEEEEeCCCcEEEeeCCCCe-----
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL--SDGEQVITASWDRVANLFDVETGT-----  304 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~s~~~d~~v~iwd~~~~~-----  304 (361)
                      +.++                          .+...+.+|...|.+++|+  +++.++++|+.|+.|++||++++.     
T Consensus       190 ~~~~--------------------------~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~  243 (464)
T 3v7d_B          190 IKKG--------------------------CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDH  243 (464)
T ss_dssp             TTTT--------------------------EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC---
T ss_pred             CCCC--------------------------cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccc
Confidence            9765                          2567788999999999998  578999999999999999998765     


Q ss_pred             ------------------EEEEeecCCCCCeE------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430         305 ------------------ILQSLTGHDEEPHI------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST  360 (361)
Q Consensus       305 ------------------~~~~~~~h~~~v~~------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~  360 (361)
                                        .+..+.+|...+.+      ++++++     .||.|++|  |+   +. ..++..+.+|...
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-----~d~~i~vw--d~---~~-~~~~~~~~~~~~~  312 (464)
T 3v7d_B          244 GEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGS-----YDNTLIVW--DV---AQ-MKCLYILSGHTDR  312 (464)
T ss_dssp             ---CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEE-----TTSCEEEE--ET---TT-TEEEEEECCCSSC
T ss_pred             cccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEe-----CCCeEEEE--EC---CC-CcEEEEecCCCCC
Confidence                              35567788888877      567777     99999999  87   44 5678889999865


Q ss_pred             C
Q psy8430         361 G  361 (361)
Q Consensus       361 ~  361 (361)
                      |
T Consensus       313 v  313 (464)
T 3v7d_B          313 I  313 (464)
T ss_dssp             E
T ss_pred             E
Confidence            3

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.91  E-value=2.3e-22  Score=185.61  Aligned_cols=148  Identities=27%  Similarity=0.579  Sum_probs=110.8

Q ss_pred             cceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC
Q psy8430         137 TSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD  216 (361)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~  216 (361)
                      .+..+..|..  .+++.+..+.+|.+.|++++|+  +++|++|+.||+|++||+.+++.+..+.+|...|.++.|+  +.
T Consensus       137 ~dg~i~vwd~--~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~  210 (445)
T 2ovr_B          137 DDNTLKVWSA--VTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EK  210 (445)
T ss_dssp             TTSCEEEEET--TTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TT
T ss_pred             CCCcEEEEEC--CCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CC
Confidence            3334444444  4567888999999999999998  5699999999999999999999999999999999999995  56


Q ss_pred             EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy8430         217 LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVAN  296 (361)
Q Consensus       217 ~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~  296 (361)
                      .+++|+.||.|++||+.++.                          +...+.+|...|.+++|  ++.++++|+.||.|+
T Consensus       211 ~l~s~s~dg~i~~wd~~~~~--------------------------~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~  262 (445)
T 2ovr_B          211 RVVSGSRDATLRVWDIETGQ--------------------------CLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVK  262 (445)
T ss_dssp             EEEEEETTSEEEEEESSSCC--------------------------EEEEEECCSSCEEEEEE--CSSCEEEEETTSCEE
T ss_pred             EEEEEeCCCEEEEEECCCCc--------------------------EEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEE
Confidence            89999999999999998663                          33444555555555555  455555555555555


Q ss_pred             EeeCCCCeEEEEeecCCCCCeE
Q psy8430         297 LFDVETGTILQSLTGHDEEPHI  318 (361)
Q Consensus       297 iwd~~~~~~~~~~~~h~~~v~~  318 (361)
                      +||+++++++..+.+|...+.+
T Consensus       263 iwd~~~~~~~~~~~~~~~~v~~  284 (445)
T 2ovr_B          263 VWDPETETCLHTLQGHTNRVYS  284 (445)
T ss_dssp             EEEGGGTEEEEEECCCSSCEEE
T ss_pred             EEECCCCcEeEEecCCCCceEE
Confidence            5555555555555555555555

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.91  E-value=8.4e-23  Score=177.35  Aligned_cols=161  Identities=11%  Similarity=0.018  Sum_probs=122.0

Q ss_pred             CeEEEEEcCC----CCEEEEEeC--------------------CCcEEEEeC-CCCeEEEEEeCCCCCeEEEEEec---C
Q psy8430         163 GVWDVAVRPG----QPVLGSASA--------------------DRTVRLWST-QTGKCVLQYSGHSGSVNSVRFLP---N  214 (361)
Q Consensus       163 ~V~~l~~~~~----~~~l~s~s~--------------------d~~i~~wd~-~~~~~~~~~~~h~~~v~~v~~~~---~  214 (361)
                      .|..++++|+    +..+++++.                    |+.|++|++ .+|+.+..+.+|...+..++|+|   +
T Consensus       113 ~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~  192 (356)
T 2w18_A          113 EIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGM  192 (356)
T ss_dssp             EEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETS
T ss_pred             ceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCC
Confidence            4566666777    777777653                    889999999 45788888888999999999999   7


Q ss_pred             CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCC---CcEEEEEEcCCCCEE-----
Q psy8430         215 KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHS---NVVIAADWLSDGEQV-----  286 (361)
Q Consensus       215 ~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l-----  286 (361)
                      +..|++++.|++|+|||+.+++                          ++..+.+|.   ..+.+++|+|+|.++     
T Consensus       193 ~~~LaSgS~D~TIkIWDl~TGk--------------------------~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~  246 (356)
T 2w18_A          193 QEALLGTTIMNNIVIWNLKTGQ--------------------------LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSH  246 (356)
T ss_dssp             TTEEEEEETTSEEEEEETTTCC--------------------------EEEEEECCC---CCCEEEEEEETTEEEEEEC-
T ss_pred             CceEEEecCCCcEEEEECCCCc--------------------------EEEEEcCCCcceeeeEEEEECCCCCEEEEecc
Confidence            7999999999999999998773                          566676654   367778999999887     


Q ss_pred             -------EEEeCCCcEEEeeCCCCeEEEEe-----ecCCCCCeE------EEEEcCCCcccCCCeEEEEcCCCCCCCCcc
Q psy8430         287 -------ITASWDRVANLFDVETGTILQSL-----TGHDEEPHI------LCVSSYYSKVSCDLFQRIQHLDCGTSENPI  348 (361)
Q Consensus       287 -------~s~~~d~~v~iwd~~~~~~~~~~-----~~h~~~v~~------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~  348 (361)
                             ++|+.|++|++||..+++++..+     .+|.....+      ++++++     .||+|+||  |+   +. .
T Consensus       247 ~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS-----~DgTIkIW--Dl---~t-G  315 (356)
T 2w18_A          247 PCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAIL-----TSGTIAIW--DL---LL-G  315 (356)
T ss_dssp             -----------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEE-----TTSCEEEE--ET---TT-C
T ss_pred             CCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEc-----CCCcEEEE--EC---CC-C
Confidence                   56888999999999999988776     356554332      578888     99999999  87   33 5


Q ss_pred             eeeeeecccccC
Q psy8430         349 HSVCVFQDIQST  360 (361)
Q Consensus       349 ~~v~~~~~h~~~  360 (361)
                      +++.+|.||...
T Consensus       316 k~l~tL~gH~~~  327 (356)
T 2w18_A          316 QCTALLPPVSDQ  327 (356)
T ss_dssp             SEEEEECCC--C
T ss_pred             cEEEEecCCCCC
Confidence            678899999764

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.91  E-value=1.2e-21  Score=175.44  Aligned_cols=189  Identities=20%  Similarity=0.340  Sum_probs=154.1

Q ss_pred             eccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC
Q psy8430         135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN  214 (361)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~  214 (361)
                      +..+..+..|..  .+++.+..+.+|.+.|++++|+|++++|++++.|++|++||+.+++.+..+. +...|.+++|+|+
T Consensus        50 ~~~dg~i~vwd~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~  126 (369)
T 3zwl_B           50 CSKDSSASVWYS--LNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPC  126 (369)
T ss_dssp             EESSSCEEEEET--TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTT
T ss_pred             EeCCCEEEEEeC--CCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccC
Confidence            333444555543  4567888999999999999999999999999999999999999999998888 8999999999999


Q ss_pred             CCEEEEEECC-----CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCC--cEEEEEEcCCCCEEE
Q psy8430         215 KDLVLSASGD-----KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSN--VVIAADWLSDGEQVI  287 (361)
Q Consensus       215 ~~~l~s~~~d-----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~  287 (361)
                      +..+++++.+     +.|.+||+.........               ......+...+..|..  .+.+++|+|++++++
T Consensus       127 ~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  191 (369)
T 3zwl_B          127 GNYFLAILDNVMKNPGSINIYEIERDSATHEL---------------TKVSEEPIHKIITHEGLDAATVAGWSTKGKYII  191 (369)
T ss_dssp             SSEEEEEECCBTTBCCEEEEEEEEECTTTCCE---------------EEECSSCSEEEECCTTCCCEEEEEECGGGCEEE
T ss_pred             CCEEEEecCCccCCCCEEEEEEecCCccceee---------------cccccceeeeccCCcCccceeEEEEcCCCCEEE
Confidence            9999999999     99999999765332110               1111235566777777  999999999999999


Q ss_pred             EEeCCCcEEEeeCCC-CeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCC
Q psy8430         288 TASWDRVANLFDVET-GTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGT  343 (361)
Q Consensus       288 s~~~d~~v~iwd~~~-~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~  343 (361)
                      +++.||.|++||+++ +..+..+..|...+.++.+++...   ..+.||.|++|  |+.+
T Consensus       192 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~--d~~~  249 (369)
T 3zwl_B          192 AGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLV--DVST  249 (369)
T ss_dssp             EEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEE--ETTT
T ss_pred             EEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEE--ECCC
Confidence            999999999999998 788999999999999855554422   12389999999  7733

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.91  E-value=3.4e-23  Score=190.48  Aligned_cols=183  Identities=17%  Similarity=0.208  Sum_probs=149.7

Q ss_pred             EEeeccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCC----------CeEEEEEeCCCCCeEEEEEecCCC-EEEEEE
Q psy8430         155 RSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQT----------GKCVLQYSGHSGSVNSVRFLPNKD-LVLSAS  222 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~----------~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~  222 (361)
                      ....+|.+.|++++|+|+ +.+|++|+.||.|++||+..          ...+..+.+|...|.+++|+|++. +|++|+
T Consensus       122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~  201 (430)
T 2xyi_A          122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS  201 (430)
T ss_dssp             EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred             EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence            456689999999999997 67999999999999999976          577888899999999999999988 999999


Q ss_pred             CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEeeCC
Q psy8430         223 GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVE  301 (361)
Q Consensus       223 ~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~  301 (361)
                      .||.|++||+..+...                   .....+...+.+|...|.+++|+| ++.++++++.||.|++||++
T Consensus       202 ~dg~i~vwd~~~~~~~-------------------~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~  262 (430)
T 2xyi_A          202 DDHTICLWDINATPKE-------------------HRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTR  262 (430)
T ss_dssp             TTSCEEEEETTSCCBG-------------------GGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred             CCCeEEEEeCCCCCCC-------------------CceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECC
Confidence            9999999999763210                   111123567778999999999999 78899999999999999999


Q ss_pred             CC---eEEEEeecCCCCCeEEEEEcCCC----cccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         302 TG---TILQSLTGHDEEPHILCVSSYYS----KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       302 ~~---~~~~~~~~h~~~v~~~~~s~s~~----~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      ++   .++..+..|...|.++.+++...    ..+.||.|++|  |+   +....++..+.+|.+.|
T Consensus       263 ~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vw--d~---~~~~~~~~~~~~h~~~v  324 (430)
T 2xyi_A          263 NNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALW--DL---RNLKLKLHSFESHKDEI  324 (430)
T ss_dssp             CSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEE--ET---TCTTSCSEEEECCSSCE
T ss_pred             CCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEE--eC---CCCCCCeEEeecCCCCE
Confidence            87   57788889999998855554311    12389999999  88   54445678888887653

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.91  E-value=6.6e-23  Score=188.93  Aligned_cols=202  Identities=15%  Similarity=0.183  Sum_probs=149.7

Q ss_pred             eeccceeEEeeecCccc---------eeeeEEeeccC------------CCeEEEEEcCCC--CEEEEEeCCCcEEEEeC
Q psy8430         134 KVQTSKIVSSFKTSLLS---------CYKIRSFSGHR------------DGVWDVAVRPGQ--PVLGSASADRTVRLWST  190 (361)
Q Consensus       134 ~~~~~~~~~~~~~~~~~---------~~~~~~l~~h~------------~~V~~l~~~~~~--~~l~s~s~d~~i~~wd~  190 (361)
                      .+..+..+.+|......         .+++..+.+|.            +.|++++|+|++  ..|++|+.|++|++||+
T Consensus        45 ~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~  124 (447)
T 3dw8_B           45 TGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKI  124 (447)
T ss_dssp             EEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEE
T ss_pred             EEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEec
Confidence            34455566666654322         34688899998            899999999998  79999999999999998


Q ss_pred             CCCeEE---------------------------------------EE-EeCCCCCeEEEEEecCCCEEEEEECCCcEEEE
Q psy8430         191 QTGKCV---------------------------------------LQ-YSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  230 (361)
Q Consensus       191 ~~~~~~---------------------------------------~~-~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lw  230 (361)
                      .++...                                       .. ..+|...|.+++|+|++++|++| .|+.|++|
T Consensus       125 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iw  203 (447)
T 3dw8_B          125 SERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLW  203 (447)
T ss_dssp             EEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEE
T ss_pred             ccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEE
Confidence            764432                                       12 35799999999999999999998 89999999


Q ss_pred             eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEeeCCCCeE----
Q psy8430         231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG-EQVITASWDRVANLFDVETGTI----  305 (361)
Q Consensus       231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~----  305 (361)
                      |+........                  ........+.+|...|.+++|+|++ .+|++|+.||.|++||+++++.    
T Consensus       204 d~~~~~~~~~------------------~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  265 (447)
T 3dw8_B          204 HLEITDRSFN------------------IVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRH  265 (447)
T ss_dssp             ETTEEEEEEE------------------EEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTT
T ss_pred             ECCCCCceee------------------eeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccce
Confidence            9974321100                  0000001345789999999999998 9999999999999999999887    


Q ss_pred             EEEeecCCC------------CCeEEEEEcCCC--cccCCCeEEEEcCCCCCCCCcceeeeeeccccc
Q psy8430         306 LQSLTGHDE------------EPHILCVSSYYS--KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQS  359 (361)
Q Consensus       306 ~~~~~~h~~------------~v~~~~~s~s~~--~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~  359 (361)
                      +..+.+|..            .|.++.+++.+.  ..+.+|.|+||  |+   +....++..+.+|..
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iw--d~---~~~~~~~~~~~~~~~  328 (447)
T 3dw8_B          266 SKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVW--DL---NMENRPVETYQVHEY  328 (447)
T ss_dssp             CEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEE--ET---TCCSSCSCCEESCGG
T ss_pred             eeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEE--eC---CCCccccceeecccc
Confidence            788888876            788755555422  22233999999  88   433456777888863

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.91  E-value=6.4e-23  Score=183.06  Aligned_cols=195  Identities=11%  Similarity=0.111  Sum_probs=149.7

Q ss_pred             cceeEEeeecCccceeeeEEeeccCCCeEEEE------EcCCCCEEEEEeCCCcEEEEeCCCCe-EEEEEeCCCC----C
Q psy8430         137 TSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVA------VRPGQPVLGSASADRTVRLWSTQTGK-CVLQYSGHSG----S  205 (361)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~------~~~~~~~l~s~s~d~~i~~wd~~~~~-~~~~~~~h~~----~  205 (361)
                      .+..+..|...... ..+..+.+|.+.|.+++      |+|++++|++|+.|++|++||+.++. .+..+..|.+    .
T Consensus        88 ~dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~  166 (357)
T 3i2n_A           88 FGGNLHIWNLEAPE-MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRD  166 (357)
T ss_dssp             TTSCEEEECTTSCS-SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCC
T ss_pred             CCCeEEEEeCCCCC-ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCc
Confidence            33444444443222 26788899999999995      47899999999999999999999886 6777766655    8


Q ss_pred             eEEEE----EecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC
Q psy8430         206 VNSVR----FLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS  281 (361)
Q Consensus       206 v~~v~----~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  281 (361)
                      |.+++    |+|++.++++++.||.|++||++++                           .......|...|.+++|+|
T Consensus       167 v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~---------------------------~~~~~~~~~~~v~~~~~~~  219 (357)
T 3i2n_A          167 CWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNM---------------------------ALRWETNIKNGVCSLEFDR  219 (357)
T ss_dssp             EEEEEEECCCC-CCCEEEEEETTSEEEEEETTTT---------------------------EEEEEEECSSCEEEEEESC
T ss_pred             eEEEEEEeccCCCCCEEEEEccCCeEEEEECccC---------------------------ceeeecCCCCceEEEEcCC
Confidence            99998    6789999999999999999999765                           2234467889999999999


Q ss_pred             ---CCCEEEEEeCCCcEEEeeCCCCeEEEEee-----cCCCCCeEEEEEcCCC----cccCCCeEEEEcCCCCCCCCc--
Q psy8430         282 ---DGEQVITASWDRVANLFDVETGTILQSLT-----GHDEEPHILCVSSYYS----KVSCDLFQRIQHLDCGTSENP--  347 (361)
Q Consensus       282 ---~~~~l~s~~~d~~v~iwd~~~~~~~~~~~-----~h~~~v~~~~~s~s~~----~v~~dg~i~iW~~d~~~~~~~--  347 (361)
                         ++.++++++.||.|++||+++++++..+.     +|...|.++.+++...    ..+.||.|++|  |+.++...  
T Consensus       220 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw--d~~~~~~~~~  297 (357)
T 3i2n_A          220 KDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLW--KYEYPIQRSK  297 (357)
T ss_dssp             SSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEE--EEECCSCC--
T ss_pred             CCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEe--ecCCCccccc
Confidence               99999999999999999999877665554     8999988854444311    12399999999  66433321  


Q ss_pred             -------------ceeeeeecccccCC
Q psy8430         348 -------------IHSVCVFQDIQSTG  361 (361)
Q Consensus       348 -------------~~~v~~~~~h~~~~  361 (361)
                                   ..++..+.+|.+.|
T Consensus       298 ~~~~g~~~~~~~~~~~~~~~~~~~~~v  324 (357)
T 3i2n_A          298 KDSEGIEMGVAGSVSLLQNVTLSTQPI  324 (357)
T ss_dssp             CCTTSCCCCCCCEEEEEEEEECCSSCE
T ss_pred             ccCCCCccccccccceeeccccCCCCe
Confidence                         25788888887653

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.91  E-value=3.4e-22  Score=175.03  Aligned_cols=174  Identities=24%  Similarity=0.309  Sum_probs=144.7

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEE
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI  229 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~l  229 (361)
                      ..++.+++.+|.+.|++++| |++.+|++|+.||.|++||+.++.....+..|...|.+++|+|++..+++++.||.+++
T Consensus         7 ~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~   85 (313)
T 3odt_A            7 GYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMING   85 (313)
T ss_dssp             CCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred             cHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEE
Confidence            34678889999999999999 99999999999999999999999989999999999999999999999999999999999


Q ss_pred             EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEe
Q psy8430         230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL  309 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~  309 (361)
                      |++....                       ...+...+.+|...|.+++|  ++.++++++.|+.|++||  .++.+..+
T Consensus        86 ~~~~~~~-----------------------~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~  138 (313)
T 3odt_A           86 VPLFATS-----------------------GEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNL  138 (313)
T ss_dssp             EETTCCT-----------------------TSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEE
T ss_pred             EEeeecC-----------------------CCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEec
Confidence            9986431                       12356677899999999999  678999999999999999  77888999


Q ss_pred             ecCCCCCeEEEEEc-C---CCcccCCCeEEEEcCCCCCCCCcceeeeeecc-ccc
Q psy8430         310 TGHDEEPHILCVSS-Y---YSKVSCDLFQRIQHLDCGTSENPIHSVCVFQD-IQS  359 (361)
Q Consensus       310 ~~h~~~v~~~~~s~-s---~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~-h~~  359 (361)
                      ..|...+.++.+.. .   ....+.||.|++|  |.      ...+..+.+ |..
T Consensus       139 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~--d~------~~~~~~~~~~~~~  185 (313)
T 3odt_A          139 QAHNASVWDAKVVSFSENKFLTASADKTIKLW--QN------DKVIKTFSGIHND  185 (313)
T ss_dssp             ECCSSCEEEEEEEETTTTEEEEEETTSCEEEE--ET------TEEEEEECSSCSS
T ss_pred             ccCCCceeEEEEccCCCCEEEEEECCCCEEEE--ec------CceEEEEeccCcc
Confidence            99999988744433 1   1122389999999  75      234555555 443

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.90  E-value=7.6e-23  Score=185.56  Aligned_cols=198  Identities=12%  Similarity=0.060  Sum_probs=155.9

Q ss_pred             eeeeeccceeEEeeecCccc----eeeeEEeeccCCCeEEEEEcCC----C---CEEEEEeCCCcEEEEeCCCCeE----
Q psy8430         131 NKLKVQTSKIVSSFKTSLLS----CYKIRSFSGHRDGVWDVAVRPG----Q---PVLGSASADRTVRLWSTQTGKC----  195 (361)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~h~~~V~~l~~~~~----~---~~l~s~s~d~~i~~wd~~~~~~----  195 (361)
                      ..+.+..+..+..|......    ...+..+.+|...|++++|+|+    +   .+|++++.|+.|++||+.+++.    
T Consensus        28 ~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~  107 (397)
T 1sq9_A           28 FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKV  107 (397)
T ss_dssp             EEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCE
T ss_pred             eEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccc
Confidence            34445556667777765544    4478888899999999999999    9   9999999999999999988876    


Q ss_pred             -EEEEeCC-----CCCeEEEEEe----cCCCE-EEEEECCCcEEEEeccc------cccccCCCCCCCCCCCCCCCCCce
Q psy8430         196 -VLQYSGH-----SGSVNSVRFL----PNKDL-VLSASGDKSVHIWQAVI------NWECLNNDNDSDLDESKEPDESSI  258 (361)
Q Consensus       196 -~~~~~~h-----~~~v~~v~~~----~~~~~-l~s~~~d~~i~lwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~  258 (361)
                       ...+..|     ...|.+++|+    |++.. |++++.||.|++||+.+      +....                   
T Consensus       108 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-------------------  168 (397)
T 1sq9_A          108 IFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN-------------------  168 (397)
T ss_dssp             EEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC-------------------
T ss_pred             cceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceee-------------------
Confidence             8888888     5999999999    99999 99999999999999986      32211                   


Q ss_pred             ecccccEEE-------eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec---C---CCCCeEEEEEcCC
Q psy8430         259 TLRTPVKEL-------LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG---H---DEEPHILCVSSYY  325 (361)
Q Consensus       259 ~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~---h---~~~v~~~~~s~s~  325 (361)
                        ..+...+       ..|...+.+++|+|++ ++++++.|+.|++||+++++++..+..   |   ...+.++.+++..
T Consensus       169 --~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~  245 (397)
T 1sq9_A          169 --WSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG  245 (397)
T ss_dssp             --CCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSST
T ss_pred             --ccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCC
Confidence              1122244       4488899999999999 999999999999999999999999998   8   8888885555442


Q ss_pred             C---cccCC---CeEEEEcCCCCCCCCcceeeeeecc
Q psy8430         326 S---KVSCD---LFQRIQHLDCGTSENPIHSVCVFQD  356 (361)
Q Consensus       326 ~---~v~~d---g~i~iW~~d~~~~~~~~~~v~~~~~  356 (361)
                      .   ..+.|   |.|++|  |+   +. ..++..+.+
T Consensus       246 ~~l~~~~~d~~~g~i~i~--d~---~~-~~~~~~~~~  276 (397)
T 1sq9_A          246 SLLAIAHDSNSFGCITLY--ET---EF-GERIGSLSV  276 (397)
T ss_dssp             TEEEEEEEETTEEEEEEE--ET---TT-CCEEEEECB
T ss_pred             CEEEEEecCCCCceEEEE--EC---CC-Ccccceecc
Confidence            2   12378   999999  77   33 456777877

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.90  E-value=1.5e-22  Score=186.37  Aligned_cols=162  Identities=11%  Similarity=0.140  Sum_probs=134.3

Q ss_pred             cCCCeEEEE--EcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeC--CCCCeEEEEEecCCCEEEEEECCCcEEEEecccc
Q psy8430         160 HRDGVWDVA--VRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG--HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN  235 (361)
Q Consensus       160 h~~~V~~l~--~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~--h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~  235 (361)
                      +...+.++.  +++++.+|++|+.|++|++||+.+++.+..+.+  |.+.|.+++|+|++.+|++|+.||.|++||++++
T Consensus       167 ~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~  246 (437)
T 3gre_A          167 KNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN  246 (437)
T ss_dssp             SCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred             cccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc
Confidence            456677777  668899999999999999999999999999998  8999999999999999999999999999999765


Q ss_pred             ccccCCCCCCCCCCCCCCCCCceecccccEEEe-CCCCcEEEEEEcC----CCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430         236 WECLNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLS----DGEQVITASWDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~----~~~~l~s~~~d~~v~iwd~~~~~~~~~~~  310 (361)
                                                .++..+. .|...|.+++|+|    ++.++++|+.||.|++||+++++++..+.
T Consensus       247 --------------------------~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  300 (437)
T 3gre_A          247 --------------------------VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFI  300 (437)
T ss_dssp             --------------------------EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEE
T ss_pred             --------------------------cEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEE
Confidence                                      2455554 7888999996664    67899999999999999999999999998


Q ss_pred             cCCCCCe---------------------------------EEEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeeccc
Q psy8430         311 GHDEEPH---------------------------------ILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDI  357 (361)
Q Consensus       311 ~h~~~v~---------------------------------~~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h  357 (361)
                      +|...+.                                 .++++++     .||.|++|  |+.   . ..++..+.+|
T Consensus       301 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~-----~d~~i~~w--d~~---~-~~~~~~~~~~  369 (437)
T 3gre_A          301 NSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDE-----ATSSIVMF--SLN---E-LSSSKAVISP  369 (437)
T ss_dssp             SSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEG-----GGTEEEEE--ETT---C-GGGCEEEECC
T ss_pred             cCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecC-----CCCeEEEE--ECC---C-cccceEEecc
Confidence            7653332                                 2567777     99999999  773   3 3445566665


Q ss_pred             c
Q psy8430         358 Q  358 (361)
Q Consensus       358 ~  358 (361)
                      .
T Consensus       370 ~  370 (437)
T 3gre_A          370 S  370 (437)
T ss_dssp             -
T ss_pred             c
Confidence            3

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.90  E-value=5.3e-22  Score=180.77  Aligned_cols=167  Identities=17%  Similarity=0.301  Sum_probs=135.6

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC-EEEEEE--CCCcE
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSAS--GDKSV  227 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~--~d~~i  227 (361)
                      ...+..+.+|.+.|.+++|+|++.+|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++. ++++++  .|+.|
T Consensus       207 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i  286 (401)
T 4aez_A          207 NHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQI  286 (401)
T ss_dssp             SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEE
T ss_pred             cceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEE
Confidence            456788899999999999999999999999999999999999999999999999999999999764 566655  69999


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe--CCCcEEEeeCCCCeE
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS--WDRVANLFDVETGTI  305 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~d~~v~iwd~~~~~~  305 (361)
                      ++||+.++.                          +...+. +...+.+++|+|+++++++++  .||.|++||+.++..
T Consensus       287 ~i~d~~~~~--------------------------~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~  339 (401)
T 4aez_A          287 HFWNAATGA--------------------------RVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGL  339 (401)
T ss_dssp             EEEETTTCC--------------------------EEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEE
T ss_pred             EEEECCCCC--------------------------EEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccc
Confidence            999997652                          344443 667899999999999999954  899999999998765


Q ss_pred             EE--EeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCC
Q psy8430         306 LQ--SLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSEN  346 (361)
Q Consensus       306 ~~--~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~  346 (361)
                      ..  .+.+|...|.++.+++++.   ..+.||.|++|  |+.+++.
T Consensus       340 ~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw--~~~~~~~  383 (401)
T 4aez_A          340 TKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFW--RVYDGDH  383 (401)
T ss_dssp             EEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEE--ECCC---
T ss_pred             eeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEE--ECCCCcc
Confidence            54  4678999998844443321   12399999999  7755443

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.90  E-value=2e-21  Score=171.83  Aligned_cols=189  Identities=13%  Similarity=0.180  Sum_probs=149.8

Q ss_pred             ceeEEeeecCccc-eeeeEEee--ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe--EEEEEeCCCCCeEEEEEe
Q psy8430         138 SKIVSSFKTSLLS-CYKIRSFS--GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFL  212 (361)
Q Consensus       138 ~~~~~~~~~~~~~-~~~~~~l~--~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~--~~~~~~~h~~~v~~v~~~  212 (361)
                      +..+..|...... ...+..+.  +|...|.+++|+|++++|++++.|+.|++||+.+++  ....+..|...|.+++|+
T Consensus        71 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~  150 (337)
T 1gxr_A           71 KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAIS  150 (337)
T ss_dssp             BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEEC
T ss_pred             CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEEC
Confidence            4555666654432 23344444  799999999999999999999999999999999886  667788899999999999


Q ss_pred             cCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy8430         213 PNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD  292 (361)
Q Consensus       213 ~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d  292 (361)
                      |+++.+++++.||.|++||++++                          .....+.+|...+.+++|+|+++++++++.|
T Consensus       151 ~~~~~l~~~~~dg~v~~~d~~~~--------------------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  204 (337)
T 1gxr_A          151 PDSKVCFSCCSDGNIAVWDLHNQ--------------------------TLVRQFQGHTDGASCIDISNDGTKLWTGGLD  204 (337)
T ss_dssp             TTSSEEEEEETTSCEEEEETTTT--------------------------EEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             CCCCEEEEEeCCCcEEEEeCCCC--------------------------ceeeeeecccCceEEEEECCCCCEEEEEecC
Confidence            99999999999999999998765                          2566778899999999999999999999999


Q ss_pred             CcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430         293 RVANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST  360 (361)
Q Consensus       293 ~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~  360 (361)
                      +.|++||+++++.+..+. +...+.++.+++...   ..+.||.|++|  |+.+..     ...+.+|...
T Consensus       205 g~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~--~~~~~~-----~~~~~~~~~~  267 (337)
T 1gxr_A          205 NTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVL--HVNKPD-----KYQLHLHESC  267 (337)
T ss_dssp             SEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEE--ETTSSC-----EEEECCCSSC
T ss_pred             CcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEE--ECCCCC-----eEEEcCCccc
Confidence            999999999999888775 666777755444321   11389999999  763221     2355666553

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.90  E-value=3.1e-22  Score=207.05  Aligned_cols=164  Identities=21%  Similarity=0.293  Sum_probs=145.8

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd  231 (361)
                      .....+.+|.+.|++++|+|+|.+|++|+.||+|++||+.+++.+..+.+|...|.+++|+|+++++++++.||.|++||
T Consensus       606 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd  685 (1249)
T 3sfz_A          606 LSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWD  685 (1249)
T ss_dssp             CCSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             cceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence            34456789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC--CCCEEEEEeCCCcEEEeeCCCCeEEEEe
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS--DGEQVITASWDRVANLFDVETGTILQSL  309 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~d~~v~iwd~~~~~~~~~~  309 (361)
                      +.++                          ..+..+.+|...|.+++|+|  ++.++++|+.|+.|++||+++++++.++
T Consensus       686 ~~~~--------------------------~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~  739 (1249)
T 3sfz_A          686 SATG--------------------------KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTM  739 (1249)
T ss_dssp             TTTC--------------------------CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEE
T ss_pred             CCCC--------------------------ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhhee
Confidence            8765                          36778889999999999999  5668999999999999999999999999


Q ss_pred             ecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCC
Q psy8430         310 TGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGT  343 (361)
Q Consensus       310 ~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~  343 (361)
                      .+|...|.++.++++..   ..+.||.|++|  |+.+
T Consensus       740 ~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vw--d~~~  774 (1249)
T 3sfz_A          740 FGHTNSVNHCRFSPDDELLASCSADGTLRLW--DVRS  774 (1249)
T ss_dssp             CCCSSCEEEEEECSSTTEEEEEESSSEEEEE--EGGG
T ss_pred             cCCCCCEEEEEEecCCCEEEEEECCCeEEEE--eCCC
Confidence            99999999855544421   22399999999  7733

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.90  E-value=6.9e-23  Score=186.96  Aligned_cols=193  Identities=18%  Similarity=0.186  Sum_probs=154.7

Q ss_pred             cceeEEeeecCc--cceeeeEEeeccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCe------EEEE---EeCCCC
Q psy8430         137 TSKIVSSFKTSL--LSCYKIRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGK------CVLQ---YSGHSG  204 (361)
Q Consensus       137 ~~~~~~~~~~~~--~~~~~~~~l~~h~~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~~~------~~~~---~~~h~~  204 (361)
                      .+..+..|....  .....+..+.+|.+.|++++|+|+ +.+|++|+.|++|++||+.+++      ....   +.+|..
T Consensus        87 ~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~  166 (416)
T 2pm9_A           87 DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVD  166 (416)
T ss_dssp             SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSC
T ss_pred             cCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCC
Confidence            344455555544  123578889999999999999998 8899999999999999998876      3322   357999


Q ss_pred             CeEEEEEecC-CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCC------CCcEEEE
Q psy8430         205 SVNSVRFLPN-KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGH------SNVVIAA  277 (361)
Q Consensus       205 ~v~~v~~~~~-~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~  277 (361)
                      .|.+++|+|+ +.+|++++.||.|++||++++.                          +...+..+      ...+.++
T Consensus       167 ~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~--------------------------~~~~~~~~~~~~~~~~~v~~~  220 (416)
T 2pm9_A          167 EVISLAWNQSLAHVFASAGSSNFASIWDLKAKK--------------------------EVIHLSYTSPNSGIKQQLSVV  220 (416)
T ss_dssp             CCCEEEECSSCTTEEEEESSSSCEEEEETTTTE--------------------------EEEEECCCCCSSCCCCCEEEE
T ss_pred             CeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCC--------------------------cceEEeccccccccCCceEEE
Confidence            9999999998 7899999999999999998653                          34444444      7899999


Q ss_pred             EEcCCC-CEEEEEeCCC---cEEEeeCCCC-eEEEEee-cCCCCCeEEEEEc-CCC---cccCCCeEEEEcCCCCCCCCc
Q psy8430         278 DWLSDG-EQVITASWDR---VANLFDVETG-TILQSLT-GHDEEPHILCVSS-YYS---KVSCDLFQRIQHLDCGTSENP  347 (361)
Q Consensus       278 ~~~~~~-~~l~s~~~d~---~v~iwd~~~~-~~~~~~~-~h~~~v~~~~~s~-s~~---~v~~dg~i~iW~~d~~~~~~~  347 (361)
                      +|+|++ .++++++.|+   .|++||++++ .++..+. +|...|.++.+++ ...   ..+.||.|++|  |+   +. 
T Consensus       221 ~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~w--d~---~~-  294 (416)
T 2pm9_A          221 EWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLW--NP---ES-  294 (416)
T ss_dssp             EECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEE--CS---SS-
T ss_pred             EECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEe--eC---CC-
Confidence            999997 6899999998   9999999986 6778888 8999999877765 311   23589999999  77   33 


Q ss_pred             ceeeeeecccccCC
Q psy8430         348 IHSVCVFQDIQSTG  361 (361)
Q Consensus       348 ~~~v~~~~~h~~~~  361 (361)
                      ..++..+.+|...|
T Consensus       295 ~~~~~~~~~~~~~v  308 (416)
T 2pm9_A          295 AEQLSQFPARGNWC  308 (416)
T ss_dssp             CCEEEEEECSSSCC
T ss_pred             CccceeecCCCCce
Confidence            46688888888754

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.90  E-value=7.6e-23  Score=188.52  Aligned_cols=198  Identities=16%  Similarity=0.179  Sum_probs=139.5

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe-----------EEEEEeCCC------------CCeEEEEEecCC
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-----------CVLQYSGHS------------GSVNSVRFLPNK  215 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~-----------~~~~~~~h~------------~~v~~v~~~~~~  215 (361)
                      .|.+.|++++|+|+|.+|++|+.||.|++||+.++.           ....+.+|.            ..|.+++|+|++
T Consensus        26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~  105 (447)
T 3dw8_B           26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK  105 (447)
T ss_dssp             CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred             cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence            478999999999999999999999999999998776           578889998            889999999998


Q ss_pred             --CEEEEEECCCcEEEEeccccccccCCCCCCCCCC----CCCCCCCc---------eecccccEEE-eCCCCcEEEEEE
Q psy8430         216 --DLVLSASGDKSVHIWQAVINWECLNNDNDSDLDE----SKEPDESS---------ITLRTPVKEL-LGHSNVVIAADW  279 (361)
Q Consensus       216 --~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~----~~~~~~~~---------~~~~~~~~~~-~~~~~~v~~~~~  279 (361)
                        ..|++++.|++|++||+..+..............    ........         .....+...+ .+|...|.+++|
T Consensus       106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~  185 (447)
T 3dw8_B          106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI  185 (447)
T ss_dssp             SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred             CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence              7999999999999999987543211100000000    00000000         0001122233 579999999999


Q ss_pred             cCCCCEEEEEeCCCcEEEeeCCC-CeEEE-------EeecCCCCCeEEEEEcCC-C---cccCCCeEEEEcCCCCCCCCc
Q psy8430         280 LSDGEQVITASWDRVANLFDVET-GTILQ-------SLTGHDEEPHILCVSSYY-S---KVSCDLFQRIQHLDCGTSENP  347 (361)
Q Consensus       280 ~~~~~~l~s~~~d~~v~iwd~~~-~~~~~-------~~~~h~~~v~~~~~s~s~-~---~v~~dg~i~iW~~d~~~~~~~  347 (361)
                      +|++++|++| .|+.|++||+++ +.++.       .+.+|...|.++.+++.. .   ..+.||.|++|  |+++++..
T Consensus       186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iw--d~~~~~~~  262 (447)
T 3dw8_B          186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLC--DMRASALC  262 (447)
T ss_dssp             CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEE--ETTTCSSS
T ss_pred             cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEE--ECcCCccc
Confidence            9999999999 799999999994 44554       356788888886665542 1   22489999999  87444432


Q ss_pred             ceeeeeeccccc
Q psy8430         348 IHSVCVFQDIQS  359 (361)
Q Consensus       348 ~~~v~~~~~h~~  359 (361)
                      ...+..+.+|..
T Consensus       263 ~~~~~~~~~~~~  274 (447)
T 3dw8_B          263 DRHSKLFEEPED  274 (447)
T ss_dssp             CTTCEEECCC--
T ss_pred             cceeeEeccCCC
Confidence            233677777764

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.90  E-value=4.2e-22  Score=206.05  Aligned_cols=181  Identities=24%  Similarity=0.320  Sum_probs=150.9

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec--CCCEEEEEECCCc
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP--NKDLVLSASGDKS  226 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~--~~~~l~s~~~d~~  226 (361)
                      .+++.+.++.+|.+.|++++|+|+|.+|++|+.|++|++||+.+++.+..+.+|...|.+++|+|  ++.++++++.|+.
T Consensus       645 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~  724 (1249)
T 3sfz_A          645 ETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFF  724 (1249)
T ss_dssp             TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSC
T ss_pred             CCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCe
Confidence            55678889999999999999999999999999999999999999999999999999999999999  5568999999999


Q ss_pred             EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEE
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  306 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~  306 (361)
                      |++||+.++                          .+...+.+|...|.+++|+|+++++++++.||.|++||++++...
T Consensus       725 v~vwd~~~~--------------------------~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~  778 (1249)
T 3sfz_A          725 LKLWDLNQK--------------------------ECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANER  778 (1249)
T ss_dssp             EEEEETTSS--------------------------SEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEE
T ss_pred             EEEEECCCc--------------------------chhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCccc
Confidence            999999765                          256778899999999999999999999999999999999887665


Q ss_pred             EEee-------------------------------------------------------cCCCCCeEEEEEcCCC---cc
Q psy8430         307 QSLT-------------------------------------------------------GHDEEPHILCVSSYYS---KV  328 (361)
Q Consensus       307 ~~~~-------------------------------------------------------~h~~~v~~~~~s~s~~---~v  328 (361)
                      ..+.                                                       +|...+.++.+++...   ..
T Consensus       779 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~  858 (1249)
T 3sfz_A          779 KSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIA  858 (1249)
T ss_dssp             EEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEE
T ss_pred             ceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEE
Confidence            5442                                                       4555555533332211   11


Q ss_pred             cCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         329 SCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       329 ~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      +.||.|++|  |+   .. ..++..+.+|.+.|
T Consensus       859 ~~dg~v~vw--d~---~~-~~~~~~~~~h~~~v  885 (1249)
T 3sfz_A          859 LSQYCVELW--NI---DS-RLKVADCRGHLSWV  885 (1249)
T ss_dssp             CSSSCEEEE--ET---TT-TEEEEEECCCSSCE
T ss_pred             eCCCeEEEE--Ec---CC-CceeeecCCCccce
Confidence            389999999  76   33 56678888988653

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.90  E-value=1.9e-23  Score=208.48  Aligned_cols=200  Identities=10%  Similarity=-0.026  Sum_probs=144.3

Q ss_pred             EEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEE----EEE--e-----CCCCCeEEEEEecCCCEEEEEEC
Q psy8430         155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV----LQY--S-----GHSGSVNSVRFLPNKDLVLSASG  223 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~----~~~--~-----~h~~~v~~v~~~~~~~~l~s~~~  223 (361)
                      ..+.||...+.+++|+|++++|++|+.|++|++||+.++...    ...  .     +|...|.+|+|+|++++||+|+.
T Consensus       429 ~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~  508 (902)
T 2oaj_A          429 YLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIE  508 (902)
T ss_dssp             CSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEET
T ss_pred             CcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEec
Confidence            457789888999999999999999999999999999877321    111  1     78999999999999999999999


Q ss_pred             CCcEEEEeccccccccC----CCCCCCCCC-----CCCC----------CCCceecccccEEEeCCCCcEEEEEEcCCCC
Q psy8430         224 DKSVHIWQAVINWECLN----NDNDSDLDE-----SKEP----------DESSITLRTPVKELLGHSNVVIAADWLSDGE  284 (361)
Q Consensus       224 d~~i~lwd~~~~~~~~~----~~~~~~~~~-----~~~~----------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  284 (361)
                      ||+|+|||+.++.....    .........     ....          .........++..+.+|.+.|++++|+|+| 
T Consensus       509 DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-  587 (902)
T 2oaj_A          509 TGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-  587 (902)
T ss_dssp             TSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-
T ss_pred             CcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-
Confidence            99999999987632100    000000000     0000          000001123567888999999999999999 


Q ss_pred             EEEEEeCCCcEEEeeCCCCeEEE-----Eee-cCCCCCeEEEEE-----cCC-----C-cccCCCeEEEEcCCCCCCCCc
Q psy8430         285 QVITASWDRVANLFDVETGTILQ-----SLT-GHDEEPHILCVS-----SYY-----S-KVSCDLFQRIQHLDCGTSENP  347 (361)
Q Consensus       285 ~l~s~~~d~~v~iwd~~~~~~~~-----~~~-~h~~~v~~~~~s-----~s~-----~-~v~~dg~i~iW~~d~~~~~~~  347 (361)
                      +|++|+.|++|++||++++..+.     .+. +|...|.++.|+     +++     + ..+.||+|++|+++.   ...
T Consensus       588 ~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p---~~~  664 (902)
T 2oaj_A          588 FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILP---ASG  664 (902)
T ss_dssp             EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEE---CGG
T ss_pred             EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEec---CCC
Confidence            99999999999999999887664     233 788889988888     442     1 235899999994422   222


Q ss_pred             ceeeeeecccc
Q psy8430         348 IHSVCVFQDIQ  358 (361)
Q Consensus       348 ~~~v~~~~~h~  358 (361)
                      +.++..|.||+
T Consensus       665 g~~~~~~~~~~  675 (902)
T 2oaj_A          665 GKFDVQLMDIT  675 (902)
T ss_dssp             GCEEEEEEEEE
T ss_pred             CcEEEEecCce
Confidence            45677888886

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.90  E-value=7.5e-22  Score=176.64  Aligned_cols=222  Identities=12%  Similarity=0.093  Sum_probs=152.0

Q ss_pred             eeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEE-
Q psy8430         133 LKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF-  211 (361)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~-  211 (361)
                      +.+..+..+..|............+.+|.+.|++++|+|++.+|++|+.||+|++||+.+++.+. +.+|...|.+++| 
T Consensus        58 ~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~  136 (368)
T 3mmy_A           58 IAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWI  136 (368)
T ss_dssp             EEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEE
T ss_pred             EEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEE
Confidence            33444555666766554455558889999999999999999999999999999999999998776 4569999999999 


Q ss_pred             -ecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCC-----------CCceeccc---ccEEE-eCCCCcEE
Q psy8430         212 -LPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPD-----------ESSITLRT---PVKEL-LGHSNVVI  275 (361)
Q Consensus       212 -~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~---~~~~~-~~~~~~v~  275 (361)
                       +|++.+|++++.||.|++||++++...................           ...+....   ..... ..+...+.
T Consensus       137 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  216 (368)
T 3mmy_A          137 KAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHR  216 (368)
T ss_dssp             ECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEE
T ss_pred             eCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCc
Confidence             8899999999999999999998775433221111000000000           00000000   00001 11233455


Q ss_pred             EEEEcCCCCE----EEEEeCCCcEEEeeCCCC---eEEEEeecCCC------------CCeEEEEEcCCC---cccCCCe
Q psy8430         276 AADWLSDGEQ----VITASWDRVANLFDVETG---TILQSLTGHDE------------EPHILCVSSYYS---KVSCDLF  333 (361)
Q Consensus       276 ~~~~~~~~~~----l~s~~~d~~v~iwd~~~~---~~~~~~~~h~~------------~v~~~~~s~s~~---~v~~dg~  333 (361)
                      .+++.+++..    +++++.||.|++||++..   ..+..+.+|..            .|.++.+++...   ..+.||.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~  296 (368)
T 3mmy_A          217 CVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGR  296 (368)
T ss_dssp             EEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSC
T ss_pred             eEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCe
Confidence            5555555544    999999999999999987   56777887775            577755544421   1238999


Q ss_pred             EEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         334 QRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       334 i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      |+||  |+   +. ..++..+.+|...|
T Consensus       297 i~iw--d~---~~-~~~~~~~~~~~~~v  318 (368)
T 3mmy_A          297 FSFW--DK---DA-RTKLKTSEQLDQPI  318 (368)
T ss_dssp             EEEE--ET---TT-TEEEEECCCCSSCE
T ss_pred             EEEE--EC---CC-CcEEEEecCCCCCc
Confidence            9999  77   43 56788888887653

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.90  E-value=2.7e-21  Score=171.46  Aligned_cols=192  Identities=21%  Similarity=0.287  Sum_probs=155.5

Q ss_pred             eccceeEEeeecCc---cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEE
Q psy8430         135 VQTSKIVSSFKTSL---LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF  211 (361)
Q Consensus       135 ~~~~~~~~~~~~~~---~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~  211 (361)
                      +..+..+..|....   ....+.+.+.+|.+.|.+++|+|+|.+|++|+.|+.|++|+...+........+...+..+.+
T Consensus        57 ~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (340)
T 4aow_A           57 ASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAF  136 (340)
T ss_dssp             EETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred             EcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEE
Confidence            34445555565433   334677889999999999999999999999999999999999999888888889999999999


Q ss_pred             ecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCC--CEEEEE
Q psy8430         212 LPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG--EQVITA  289 (361)
Q Consensus       212 ~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~s~  289 (361)
                      ++++..|++++.|+.+++||+.....                         ......+|...+..++|++++  .+++++
T Consensus       137 ~~~~~~l~s~s~d~~~~~~d~~~~~~-------------------------~~~~~~~~~~~v~~~~~~~~~~~~~~~s~  191 (340)
T 4aow_A          137 SSDNRQIVSGSRDKTIKLWNTLGVCK-------------------------YTVQDESHSEWVSCVRFSPNSSNPIIVSC  191 (340)
T ss_dssp             CTTSSCEEEEETTSCEEEECTTSCEE-------------------------EEECSSSCSSCEEEEEECSCSSSCEEEEE
T ss_pred             eecCccceeecCCCeEEEEEeCCCce-------------------------EEEEeccccCcccceEEccCCCCcEEEEE
Confidence            99999999999999999999864421                         233446789999999998864  578999


Q ss_pred             eCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeeeeccc
Q psy8430         290 SWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQDI  357 (361)
Q Consensus       290 ~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h  357 (361)
                      +.|+.|++||+++++++..+.+|...|.++.+++...   ..+.||.|++|  |+   +. ..++..+.+|
T Consensus       192 ~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iw--d~---~~-~~~~~~~~~~  256 (340)
T 4aow_A          192 GWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLW--DL---NE-GKHLYTLDGG  256 (340)
T ss_dssp             ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEE--ET---TT-TEEEEEEECS
T ss_pred             cCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEE--Ee---cc-CceeeeecCC
Confidence            9999999999999999999999999999855444311   12399999999  77   33 4455666554

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.90  E-value=1e-21  Score=171.96  Aligned_cols=172  Identities=22%  Similarity=0.330  Sum_probs=146.7

Q ss_pred             ccceeEEeeecCccceeeeEEeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEeC-CCCCeEEEEEec
Q psy8430         136 QTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSG-HSGSVNSVRFLP  213 (361)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~-h~~~v~~v~~~~  213 (361)
                      ..+..+..|.    ....+..+.+|.+.|.+++|.| ++.++++++.|+.|++||  .++....+.. |...|.+++|+|
T Consensus       121 ~~d~~i~~~d----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~  194 (313)
T 3odt_A          121 SWDKTAKVWK----EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVD  194 (313)
T ss_dssp             ETTSEEEEEE----TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEE
T ss_pred             eCCCCEEEEc----CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcC
Confidence            3344445554    5577888899999999999988 899999999999999999  5667777777 999999999999


Q ss_pred             CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC
Q psy8430         214 NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR  293 (361)
Q Consensus       214 ~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~  293 (361)
                      ++. +++++.||.|++||++++                          .++..+.+|...|.+++|+|++ .+++++.||
T Consensus       195 ~~~-~~~~~~dg~i~i~d~~~~--------------------------~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg  246 (313)
T 3odt_A          195 DGH-FISCSNDGLIKLVDMHTG--------------------------DVLRTYEGHESFVYCIKLLPNG-DIVSCGEDR  246 (313)
T ss_dssp             TTE-EEEEETTSEEEEEETTTC--------------------------CEEEEEECCSSCEEEEEECTTS-CEEEEETTS
T ss_pred             CCe-EEEccCCCeEEEEECCch--------------------------hhhhhhhcCCceEEEEEEecCC-CEEEEecCC
Confidence            988 999999999999998765                          3667788999999999999999 689999999


Q ss_pred             cEEEeeCCCCeEEEEeecCCCCCeEEEEEcCC--CcccCCCeEEEEcCCCCC
Q psy8430         294 VANLFDVETGTILQSLTGHDEEPHILCVSSYY--SKVSCDLFQRIQHLDCGT  343 (361)
Q Consensus       294 ~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~--~~v~~dg~i~iW~~d~~~  343 (361)
                      .|++||+++++++..+..|...+.++.++...  +..+.||.|++|  |+.+
T Consensus       247 ~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw--~~~~  296 (313)
T 3odt_A          247 TVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIF--SQEK  296 (313)
T ss_dssp             EEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEE--ESCG
T ss_pred             EEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEE--eCCC
Confidence            99999999999999999999999886666552  233589999999  6633

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.90  E-value=6e-22  Score=182.37  Aligned_cols=174  Identities=22%  Similarity=0.370  Sum_probs=149.3

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEE---EEEeCCCCCeEEEEEecCCCEEEEEECCC
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV---LQYSGHSGSVNSVRFLPNKDLVLSASGDK  225 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~---~~~~~h~~~v~~v~~~~~~~~l~s~~~d~  225 (361)
                      .+++.+.++.+|.+.|.+++|++  ..+++|+.||+|++||+.++...   ..+.+|...|.+++|  +++.+++|+.||
T Consensus       201 ~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg  276 (435)
T 1p22_A          201 NTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDR  276 (435)
T ss_dssp             SSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTS
T ss_pred             CCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCC
Confidence            45678899999999999999974  49999999999999999887544   677899999999999  688999999999


Q ss_pred             cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE
Q psy8430         226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI  305 (361)
Q Consensus       226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~  305 (361)
                      .|++||++++                          .++..+.+|...|.+++|  ++.++++|+.||.|++||++++++
T Consensus       277 ~i~vwd~~~~--------------------------~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~  328 (435)
T 1p22_A          277 TIKVWNTSTC--------------------------EFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGAC  328 (435)
T ss_dssp             EEEEEETTTC--------------------------CEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCE
T ss_pred             eEEEEECCcC--------------------------cEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCE
Confidence            9999998765                          356778899999999999  578999999999999999999999


Q ss_pred             EEEeecCCCCCeE------EEEEcCCCcccCCCeEEEEcCCCCCCCCc-----ceeeeeecccccCC
Q psy8430         306 LQSLTGHDEEPHI------LCVSSYYSKVSCDLFQRIQHLDCGTSENP-----IHSVCVFQDIQSTG  361 (361)
Q Consensus       306 ~~~~~~h~~~v~~------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~-----~~~v~~~~~h~~~~  361 (361)
                      +.++.+|...|.+      ++++++     .||.|++|  |+.++..+     ..++..+.+|.+.|
T Consensus       329 ~~~~~~h~~~v~~~~~~~~~l~sg~-----~dg~i~vw--d~~~~~~~~~~~~~~~~~~~~~h~~~v  388 (435)
T 1p22_A          329 LRVLEGHEELVRCIRFDNKRIVSGA-----YDGKIKVW--DLVAALDPRAPAGTLCLRTLVEHSGRV  388 (435)
T ss_dssp             EEEECCCSSCEEEEECCSSEEEEEE-----TTSCEEEE--EHHHHTSTTSCTTTTEEEEECCCSSCC
T ss_pred             EEEEeCCcCcEEEEEecCCEEEEEe-----CCCcEEEE--ECCCCCCccccccchheeeccCCCCCe
Confidence            9999999999988      566666     99999999  76433321     12788899998765

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.90  E-value=8.2e-22  Score=182.31  Aligned_cols=194  Identities=12%  Similarity=0.071  Sum_probs=151.7

Q ss_pred             eeccceeEEeeecCccceeeeEEee--ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE----EEeCCCCCeE
Q psy8430         134 KVQTSKIVSSFKTSLLSCYKIRSFS--GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL----QYSGHSGSVN  207 (361)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~l~--~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~----~~~~h~~~v~  207 (361)
                      .+..+..+..|......+..+..+.  .|...|++++|+|++.+|++|+.||.|++|++.++....    .+.+|...|.
T Consensus       120 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~  199 (450)
T 2vdu_B          120 CADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLT  199 (450)
T ss_dssp             EEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEE
T ss_pred             EECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceE
Confidence            3445566677776533556666666  677999999999999999999999999999998876443    6778999999


Q ss_pred             EEEEecC---CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEE-EeCCCCcEEEEEEcCCC
Q psy8430         208 SVRFLPN---KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKE-LLGHSNVVIAADWLSDG  283 (361)
Q Consensus       208 ~v~~~~~---~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~  283 (361)
                      +++|+|+   +++|++++.|+.|++||+.++.                          .+.. +.+|...|.+++|+ ++
T Consensus       200 ~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~--------------------------~~~~~~~~h~~~v~~~~~s-d~  252 (450)
T 2vdu_B          200 DVHLIKDSDGHQFIITSDRDEHIKISHYPQCF--------------------------IVDKWLFGHKHFVSSICCG-KD  252 (450)
T ss_dssp             EEEEEECTTSCEEEEEEETTSCEEEEEESCTT--------------------------CEEEECCCCSSCEEEEEEC-ST
T ss_pred             EEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc--------------------------eeeeeecCCCCceEEEEEC-CC
Confidence            9999999   9999999999999999987652                          3444 45899999999999 99


Q ss_pred             CEEEEEeCCCcEEEeeCCCCeEEEEeecC-------------------------CCCCeEEEEEcC--CCcc-c-CCCeE
Q psy8430         284 EQVITASWDRVANLFDVETGTILQSLTGH-------------------------DEEPHILCVSSY--YSKV-S-CDLFQ  334 (361)
Q Consensus       284 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~h-------------------------~~~v~~~~~s~s--~~~v-~-~dg~i  334 (361)
                      .+|++++.|+.|++||+++++++..+..+                         ...+..+.++++  ++++ + .|+.|
T Consensus       253 ~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i  332 (450)
T 2vdu_B          253 YLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCI  332 (450)
T ss_dssp             TEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEE
T ss_pred             CEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeE
Confidence            99999999999999999999999888643                         233444444443  2222 2 79999


Q ss_pred             EEEcCCC--CCCCCcceeeeeeccc
Q psy8430         335 RIQHLDC--GTSENPIHSVCVFQDI  357 (361)
Q Consensus       335 ~iW~~d~--~~~~~~~~~v~~~~~h  357 (361)
                      +||  |+  .++ ....++..+.+|
T Consensus       333 ~iw--~~~~~~~-~~l~~~~~~~~~  354 (450)
T 2vdu_B          333 IIL--EMSEKQK-GDLALKQIITFP  354 (450)
T ss_dssp             EEE--EECSSST-TCEEEEEEEECS
T ss_pred             EEE--EeccCCC-CceeeccEeccC
Confidence            999  55  222 224677777777

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.90  E-value=2.4e-22  Score=182.27  Aligned_cols=169  Identities=15%  Similarity=0.154  Sum_probs=140.9

Q ss_pred             eEEeecc-----CCCeEEEEEc----CCCCE-EEEEeCCCcEEEEeCCC------CeEEE-----EE-------eCCCCC
Q psy8430         154 IRSFSGH-----RDGVWDVAVR----PGQPV-LGSASADRTVRLWSTQT------GKCVL-----QY-------SGHSGS  205 (361)
Q Consensus       154 ~~~l~~h-----~~~V~~l~~~----~~~~~-l~s~s~d~~i~~wd~~~------~~~~~-----~~-------~~h~~~  205 (361)
                      +..+.+|     .+.|++++|+    |++.+ |++|+.||.|++||+.+      ++.+.     .+       ..|...
T Consensus       109 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (397)
T 1sq9_A          109 FEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQF  188 (397)
T ss_dssp             EEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCC
T ss_pred             ceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCC
Confidence            7788888     5999999999    99999 99999999999999988      65554     66       448999


Q ss_pred             eEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC---C---CCcEEEEEE
Q psy8430         206 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG---H---SNVVIAADW  279 (361)
Q Consensus       206 v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~v~~~~~  279 (361)
                      |.+++|+|++ .+++++.||.|++||++++                          .++..+..   |   ...|.+++|
T Consensus       189 i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~--------------------------~~~~~~~~~~~h~~~~~~i~~i~~  241 (397)
T 1sq9_A          189 ATSVDISERG-LIATGFNNGTVQISELSTL--------------------------RPLYNFESQHSMINNSNSIRSVKF  241 (397)
T ss_dssp             CCEEEECTTS-EEEEECTTSEEEEEETTTT--------------------------EEEEEEECCC---CCCCCEEEEEE
T ss_pred             ceEEEECCCc-eEEEEeCCCcEEEEECCCC--------------------------ceeEEEeccccccccCCccceEEE
Confidence            9999999999 9999999999999998765                          35667777   8   999999999


Q ss_pred             cCCCCEEEEEeCC---CcEEEeeCCCCeEEEEeec-------------CCCCCeEEEEEcCCC---cccCCCeEEEEcCC
Q psy8430         280 LSDGEQVITASWD---RVANLFDVETGTILQSLTG-------------HDEEPHILCVSSYYS---KVSCDLFQRIQHLD  340 (361)
Q Consensus       280 ~~~~~~l~s~~~d---~~v~iwd~~~~~~~~~~~~-------------h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d  340 (361)
                      +|++.+|++++.|   +.|++||+++++++..+.+             |...|.++.+++...   ..+.||.|+||  |
T Consensus       242 ~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw--d  319 (397)
T 1sq9_A          242 SPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFW--D  319 (397)
T ss_dssp             CSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEE--E
T ss_pred             CCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEE--E
Confidence            9999999999999   9999999999999999998             999998855554311   12389999999  7


Q ss_pred             CCCCCCcceeeeeec
Q psy8430         341 CGTSENPIHSVCVFQ  355 (361)
Q Consensus       341 ~~~~~~~~~~v~~~~  355 (361)
                      +   +. ..++..+.
T Consensus       320 ~---~~-~~~~~~~~  330 (397)
T 1sq9_A          320 V---KT-KERITTLN  330 (397)
T ss_dssp             T---TT-TEEEEEEE
T ss_pred             c---CC-CceeEEEe
Confidence            7   33 46677777

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.90  E-value=4.3e-22  Score=181.74  Aligned_cols=165  Identities=14%  Similarity=0.190  Sum_probs=133.2

Q ss_pred             eccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeC----CCCe------EEEEEeC----------CCCCeEEEEEecCCC
Q psy8430         158 SGHRDGVWDVAVRPGQP-VLGSASADRTVRLWST----QTGK------CVLQYSG----------HSGSVNSVRFLPNKD  216 (361)
Q Consensus       158 ~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~----~~~~------~~~~~~~----------h~~~v~~v~~~~~~~  216 (361)
                      ..|.+.|++++|+|++. +|++|+.|+.|++||+    .+++      ....+..          |...|.+++|+|+++
T Consensus        42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  121 (425)
T 1r5m_A           42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN  121 (425)
T ss_dssp             EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred             eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence            35679999999999999 9999999999999999    8887      4555554          678999999999999


Q ss_pred             EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy8430         217 LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVAN  296 (361)
Q Consensus       217 ~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~  296 (361)
                      +|++++.||.|++||...                           .....+.+|...|.+++|+|++++|++++.|+.|+
T Consensus       122 ~l~~~~~dg~i~i~~~~~---------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  174 (425)
T 1r5m_A          122 SIVTGVENGELRLWNKTG---------------------------ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTI  174 (425)
T ss_dssp             EEEEEETTSCEEEEETTS---------------------------CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEE
T ss_pred             EEEEEeCCCeEEEEeCCC---------------------------CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEE
Confidence            999999999999999432                           25677888999999999999999999999999999


Q ss_pred             EeeCCCCeEEEEeecCCCC---------------CeE-------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeee
Q psy8430         297 LFDVETGTILQSLTGHDEE---------------PHI-------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVF  354 (361)
Q Consensus       297 iwd~~~~~~~~~~~~h~~~---------------v~~-------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~  354 (361)
                      +||+.+++.+..+..+...               +.+       .+++++     .||.|++|  |+.+    ..++..+
T Consensus       175 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~i~~~--d~~~----~~~~~~~  243 (425)
T 1r5m_A          175 LWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPG-----PKGAIFVY--QITE----KTPTGKL  243 (425)
T ss_dssp             EEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEEC-----GGGCEEEE--ETTC----SSCSEEE
T ss_pred             EEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEc-----CCCeEEEE--EcCC----Cceeeee
Confidence            9999999999988877665               554       445555     99999999  7733    3445666


Q ss_pred             cccccC
Q psy8430         355 QDIQST  360 (361)
Q Consensus       355 ~~h~~~  360 (361)
                      .+|...
T Consensus       244 ~~~~~~  249 (425)
T 1r5m_A          244 IGHHGP  249 (425)
T ss_dssp             CCCSSC
T ss_pred             ccCCCc
Confidence            677654

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.90  E-value=2.3e-21  Score=178.98  Aligned_cols=165  Identities=29%  Similarity=0.453  Sum_probs=145.9

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEE
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  228 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~  228 (361)
                      .+++.+.++.+|.+.|.+++|+  +..+++|+.||+|++||+.+++.+..+.+|...|.+++|  ++..+++++.||.|+
T Consensus       187 ~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~  262 (445)
T 2ovr_B          187 ETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVK  262 (445)
T ss_dssp             TTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEE
T ss_pred             CcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEE
Confidence            4567889999999999999996  568999999999999999999999999999999999999  788999999999999


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEE
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS  308 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~  308 (361)
                      +||++++                          .++..+.+|...|.+++|  ++.++++++.|+.|++||+++++++.+
T Consensus       263 iwd~~~~--------------------------~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~  314 (445)
T 2ovr_B          263 VWDPETE--------------------------TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHT  314 (445)
T ss_dssp             EEEGGGT--------------------------EEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred             EEECCCC--------------------------cEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEE
Confidence            9998765                          356778899999999999  899999999999999999999999999


Q ss_pred             eecCCCCCeE------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecc
Q psy8430         309 LTGHDEEPHI------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQD  356 (361)
Q Consensus       309 ~~~h~~~v~~------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~  356 (361)
                      +.+|...+.+      ++++++     .||.|++|  |+   +. ..++..+.+
T Consensus       315 ~~~~~~~v~~~~~~~~~l~~~~-----~dg~i~vw--d~---~~-~~~~~~~~~  357 (445)
T 2ovr_B          315 LTGHQSLTSGMELKDNILVSGN-----ADSTVKIW--DI---KT-GQCLQTLQG  357 (445)
T ss_dssp             ECCCCSCEEEEEEETTEEEEEE-----TTSCEEEE--ET---TT-CCEEEEECS
T ss_pred             EcCCcccEEEEEEeCCEEEEEe-----CCCeEEEE--EC---CC-CcEEEEEcc
Confidence            9999988887      555666     99999999  77   33 445666765

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.90  E-value=2.8e-22  Score=182.07  Aligned_cols=163  Identities=19%  Similarity=0.243  Sum_probs=134.8

Q ss_pred             eeeEEeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEe-------------CCCCCeEEEEEec-CCC
Q psy8430         152 YKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYS-------------GHSGSVNSVRFLP-NKD  216 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~-------------~h~~~v~~v~~~~-~~~  216 (361)
                      +....+.+|.+.|++++|+| ++++|++|+.||+|++||+.++.....+.             +|...|.+++|+| ++.
T Consensus        34 ~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  113 (408)
T 4a11_B           34 KDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG  113 (408)
T ss_dssp             TTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT
T ss_pred             cceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc
Confidence            44556778999999999999 99999999999999999998875443332             5999999999999 788


Q ss_pred             EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC---CCEEEEEeCCC
Q psy8430         217 LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD---GEQVITASWDR  293 (361)
Q Consensus       217 ~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~d~  293 (361)
                      +|++++.||.|++||+.++.                          ....+ .+...+.++.|+|.   +.++++++.|+
T Consensus       114 ~l~s~~~d~~i~iwd~~~~~--------------------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (408)
T 4a11_B          114 MFTSSSFDKTLKVWDTNTLQ--------------------------TADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGP  166 (408)
T ss_dssp             CEEEEETTSEEEEEETTTTE--------------------------EEEEE-ECSSCEEEEEECSSCSSCCEEEEEESSS
T ss_pred             EEEEEeCCCeEEEeeCCCCc--------------------------cceec-cCCCceeeeEeecCCCCCcEEEEEcCCC
Confidence            99999999999999997652                          23333 37788999999984   44999999999


Q ss_pred             cEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC----cccCCCeEEEEcCCCCC
Q psy8430         294 VANLFDVETGTILQSLTGHDEEPHILCVSSYYS----KVSCDLFQRIQHLDCGT  343 (361)
Q Consensus       294 ~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~----~v~~dg~i~iW~~d~~~  343 (361)
                      .|++||+++++.+..+.+|...|.++.+++...    ..+.||.|++|  |+++
T Consensus       167 ~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~--d~~~  218 (408)
T 4a11_B          167 KVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLW--DVRR  218 (408)
T ss_dssp             SEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEE--ETTC
T ss_pred             eEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEE--ECCC
Confidence            999999999999999999999999855554421    12389999999  7743

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.90  E-value=4.2e-22  Score=181.75  Aligned_cols=163  Identities=20%  Similarity=0.275  Sum_probs=139.7

Q ss_pred             EEeeccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCeEEEEEeCC------CCCeEEEEEecCC-CEEEEEECCC-
Q psy8430         155 RSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQYSGH------SGSVNSVRFLPNK-DLVLSASGDK-  225 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h------~~~v~~v~~~~~~-~~l~s~~~d~-  225 (361)
                      ..+.+|.+.|.+++|+|+ +.+|++++.|+.|++||+.+++.+..+..|      ...|.+++|+|++ .++++++.|+ 
T Consensus       159 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~  238 (416)
T 2pm9_A          159 GQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN  238 (416)
T ss_dssp             CCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS
T ss_pred             ccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC
Confidence            345789999999999998 789999999999999999999999888876      7899999999987 6899999999 


Q ss_pred             --cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe-CCCCcEEEEEEcC-CCCEEEEEeCCCcEEEeeCC
Q psy8430         226 --SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLS-DGEQVITASWDRVANLFDVE  301 (361)
Q Consensus       226 --~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~  301 (361)
                        .|++||++++.                         .+...+. +|...|.+++|+| ++.+|++++.|+.|++||++
T Consensus       239 ~~~i~~~d~~~~~-------------------------~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~  293 (416)
T 2pm9_A          239 DPSILIWDLRNAN-------------------------TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPE  293 (416)
T ss_dssp             SCCCCEEETTSTT-------------------------SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSS
T ss_pred             CceEEEEeCCCCC-------------------------CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCC
Confidence              99999997642                         1445566 8999999999999 99999999999999999999


Q ss_pred             CCeEEEEeecCCCCCeEEEEEcCC-C---cccCCCeEEEEcCCCCCC
Q psy8430         302 TGTILQSLTGHDEEPHILCVSSYY-S---KVSCDLFQRIQHLDCGTS  344 (361)
Q Consensus       302 ~~~~~~~~~~h~~~v~~~~~s~s~-~---~v~~dg~i~iW~~d~~~~  344 (361)
                      +++++..+.+|...|.++.+++.. .   ..+.||.|+||  |+.+.
T Consensus       294 ~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw--~~~~~  338 (416)
T 2pm9_A          294 SAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQ--TLQNL  338 (416)
T ss_dssp             SCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEE--ESCCC
T ss_pred             CCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEE--EccCC
Confidence            999999999999988875555432 1   12489999999  66443

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.89  E-value=1.2e-21  Score=174.05  Aligned_cols=219  Identities=8%  Similarity=-0.010  Sum_probs=158.3

Q ss_pred             eeccceeEEeeecCccc-eeeeEEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeC-CCCeEEEEEeC--CCCCeEE
Q psy8430         134 KVQTSKIVSSFKTSLLS-CYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWST-QTGKCVLQYSG--HSGSVNS  208 (361)
Q Consensus       134 ~~~~~~~~~~~~~~~~~-~~~~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~-~~~~~~~~~~~--h~~~v~~  208 (361)
                      .+..+..+..|...... ......+.+|.+.|++++|+|++. +|++|+.||.|++||+ .+++. ..+.+  |...|.+
T Consensus        28 ~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~  106 (342)
T 1yfq_A           28 ITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICR  106 (342)
T ss_dssp             EEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEE
T ss_pred             EEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEE
Confidence            34445556666654433 233456669999999999999999 9999999999999999 87764 67788  9999999


Q ss_pred             EEEecCCCEEEEEECCCcEEEEeccc---------cccccCCCCCCCCCCCC-CC----------CCCceeccc-----c
Q psy8430         209 VRFLPNKDLVLSASGDKSVHIWQAVI---------NWECLNNDNDSDLDESK-EP----------DESSITLRT-----P  263 (361)
Q Consensus       209 v~~~~~~~~l~s~~~d~~i~lwd~~~---------~~~~~~~~~~~~~~~~~-~~----------~~~~~~~~~-----~  263 (361)
                      ++|+| +..+++++.|+.|++||+++         ................. .+          ....+....     .
T Consensus       107 l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~  185 (342)
T 1yfq_A          107 ICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNG  185 (342)
T ss_dssp             EEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCC
T ss_pred             EEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCcEEEEeCCCeEEEEECCccccccc
Confidence            99999 99999999999999999987         54333222111110000 00          000111111     2


Q ss_pred             cEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEeeCCCC------eEEEEeecCCC---------CCeEEEEEcCCC-
Q psy8430         264 VKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETG------TILQSLTGHDE---------EPHILCVSSYYS-  326 (361)
Q Consensus       264 ~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~------~~~~~~~~h~~---------~v~~~~~s~s~~-  326 (361)
                      ......|...+.+++|+| ++.++++++.||.|++||++.+      +....+.+|..         .|.++.+++.+. 
T Consensus       186 ~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  265 (342)
T 1yfq_A          186 TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKF  265 (342)
T ss_dssp             EEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCC
T ss_pred             eeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCE
Confidence            224446788999999999 9999999999999999999887      77888888865         777755554321 


Q ss_pred             --cccCCCeEEEEcCCCCCCCCcceeeeeeccc-ccC
Q psy8430         327 --KVSCDLFQRIQHLDCGTSENPIHSVCVFQDI-QST  360 (361)
Q Consensus       327 --~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h-~~~  360 (361)
                        ..+.||.|++|  |+   +. ..++..+.+| .+.
T Consensus       266 l~~~~~dg~i~vw--d~---~~-~~~~~~~~~~h~~~  296 (342)
T 1yfq_A          266 LYTAGSDGIISCW--NL---QT-RKKIKNFAKFNEDS  296 (342)
T ss_dssp             EEEEETTSCEEEE--ET---TT-TEEEEECCCCSSSE
T ss_pred             EEEecCCceEEEE--cC---cc-HhHhhhhhcccCCC
Confidence              12389999999  77   33 5668888888 654

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.89  E-value=3.3e-22  Score=184.96  Aligned_cols=170  Identities=15%  Similarity=0.132  Sum_probs=138.9

Q ss_pred             eeccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCC--CCeEEEEEe--CCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430         157 FSGHRDGVWDVAVRPGQPVL-GSASADRTVRLWSTQ--TGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       157 l~~h~~~V~~l~~~~~~~~l-~s~s~d~~i~~wd~~--~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd  231 (361)
                      ..+|.+.|++++|+|++.+| ++|+.||+|++||+.  +++.+..+.  .|...|.+++|+|++.+|++++.||.+.+|+
T Consensus        98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~  177 (450)
T 2vdu_B           98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSID  177 (450)
T ss_dssp             --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEe
Confidence            34788999999999999986 899999999999999  888887776  5779999999999999999999999999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC---CCEEEEEeCCCcEEEeeCCCCeEEEE
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD---GEQVITASWDRVANLFDVETGTILQS  308 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~d~~v~iwd~~~~~~~~~  308 (361)
                      +..+....                      .+...+.+|...|.+++|+|+   +++|++|+.|+.|++||+++++++..
T Consensus       178 ~~~~~~~~----------------------~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~  235 (450)
T 2vdu_B          178 INSIPEEK----------------------FTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDK  235 (450)
T ss_dssp             TTSCCCSS----------------------CCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEE
T ss_pred             cCCccccc----------------------ccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeee
Confidence            87552210                      023356679999999999999   99999999999999999999998887


Q ss_pred             -eecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeeeec
Q psy8430         309 -LTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQ  355 (361)
Q Consensus       309 -~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~  355 (361)
                       +.+|...|.++.++ +..   ..+.|+.|+||  |+.++    .++..+.
T Consensus       236 ~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vw--d~~~~----~~~~~~~  279 (450)
T 2vdu_B          236 WLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAW--DWKTG----KNLSTFD  279 (450)
T ss_dssp             ECCCCSSCEEEEEEC-STTEEEEEESSSEEEEE--ETTTC----CEEEEEE
T ss_pred             eecCCCCceEEEEEC-CCCEEEEEeCCCeEEEE--ECCCC----cEeeeec
Confidence             56899999986665 311   23599999999  77333    3444454

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.89  E-value=2.7e-21  Score=185.25  Aligned_cols=174  Identities=17%  Similarity=0.177  Sum_probs=151.1

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCC---CeEEEEEecC-CCEEEEEECC
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSG---SVNSVRFLPN-KDLVLSASGD  224 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~---~v~~v~~~~~-~~~l~s~~~d  224 (361)
                      .++.+..+.+|.+.|++++|+|++. .+++++.|+.|++||+.+++.+..+.+|..   .|.+++|+|+ +++|++++.|
T Consensus       149 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d  228 (615)
T 1pgu_A          149 SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD  228 (615)
T ss_dssp             TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETT
T ss_pred             CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCC
Confidence            3467788899999999999999998 899999999999999999999999999999   9999999999 9999999999


Q ss_pred             CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE-e---CCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeC
Q psy8430         225 KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL-L---GHSNVVIAADWLSDGEQVITASWDRVANLFDV  300 (361)
Q Consensus       225 ~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~  300 (361)
                      |.|++||+.++.                          .+..+ .   +|...|.+++|+ ++.++++++.|+.|++||+
T Consensus       229 g~i~vwd~~~~~--------------------------~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~  281 (615)
T 1pgu_A          229 RKISCFDGKSGE--------------------------FLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDV  281 (615)
T ss_dssp             CCEEEEETTTCC--------------------------EEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEET
T ss_pred             CeEEEEECCCCC--------------------------EeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEEC
Confidence            999999987652                          44555 4   799999999999 9999999999999999999


Q ss_pred             CCCeEEEEeecCC----CCCeE-------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         301 ETGTILQSLTGHD----EEPHI-------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       301 ~~~~~~~~~~~h~----~~v~~-------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      ++++++..+..+.    ..+.+       .+++++     .||.|++|  |+   +. ..++..+.+|.+.|
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~g~i~~~--d~---~~-~~~~~~~~~~~~~v  342 (615)
T 1pgu_A          282 TTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLS-----LDGTLNFY--EL---GH-DEVLKTISGHNKGI  342 (615)
T ss_dssp             TTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEE-----TTSCEEEE--ET---TE-EEEEEEECCCSSCE
T ss_pred             CCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEE-----CCCCEEEE--EC---CC-CcEEEEEeCCCCCE
Confidence            9999999998773    33333       455566     99999999  77   43 56788888988753

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.89  E-value=8.5e-22  Score=177.16  Aligned_cols=171  Identities=13%  Similarity=0.091  Sum_probs=130.6

Q ss_pred             ccCCCeEEEEEcCCCCEEEEE--eCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccc
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSA--SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW  236 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~--s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~  236 (361)
                      .+...+.+++|+|||++++++  +.|++|++||+.+++.+..+. |.+.|.+++|+|+|+++++++.|+ +.+|+..++.
T Consensus       131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~  208 (365)
T 4h5i_A          131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGS  208 (365)
T ss_dssp             CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCC
T ss_pred             CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCc
Confidence            345668999999999987654  478999999999999998887 888999999999999999988554 5666554442


Q ss_pred             cccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC----cEEEeeCCCCeE----EEE
Q psy8430         237 ECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR----VANLFDVETGTI----LQS  308 (361)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~----~v~iwd~~~~~~----~~~  308 (361)
                      ..                        ......+|...|.+++|+|++.++++++.|+    .+++||+..+..    ...
T Consensus       209 ~~------------------------~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~  264 (365)
T 4h5i_A          209 CI------------------------ARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQ  264 (365)
T ss_dssp             EE------------------------EEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEE
T ss_pred             ce------------------------eeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeee
Confidence            11                        1223456888999999999999999999887    588899876643    356


Q ss_pred             eecCCCCCeEEEEEcCCCc---ccCCCeEEEEcCCCCCCCCcceeeee-ecccccCC
Q psy8430         309 LTGHDEEPHILCVSSYYSK---VSCDLFQRIQHLDCGTSENPIHSVCV-FQDIQSTG  361 (361)
Q Consensus       309 ~~~h~~~v~~~~~s~s~~~---v~~dg~i~iW~~d~~~~~~~~~~v~~-~~~h~~~~  361 (361)
                      +.+|...|.++.+++++..   .+.|+.|+||  |+   +. .+++.. +.||.+.|
T Consensus       265 ~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iw--d~---~~-~~~~~~~~~gH~~~V  315 (365)
T 4h5i_A          265 VTNRFKGITSMDVDMKGELAVLASNDNSIALV--KL---KD-LSMSKIFKQAHSFAI  315 (365)
T ss_dssp             EESSCSCEEEEEECTTSCEEEEEETTSCEEEE--ET---TT-TEEEEEETTSSSSCE
T ss_pred             ecCCCCCeEeEEECCCCCceEEEcCCCEEEEE--EC---CC-CcEEEEecCcccCCE
Confidence            7789999988544443221   1399999999  87   44 556766 47998764

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.89  E-value=1.6e-21  Score=194.62  Aligned_cols=164  Identities=9%  Similarity=0.015  Sum_probs=134.4

Q ss_pred             eccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecccccc
Q psy8430         158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE  237 (361)
Q Consensus       158 ~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~  237 (361)
                      .+|.+.|++++|+|++.+||+|+.||+|++|+...++....+. |...|.+++|+| +++|++++.|++|++||+.++. 
T Consensus        14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~-   90 (902)
T 2oaj_A           14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK-   90 (902)
T ss_dssp             EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCS-
T ss_pred             cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCc-
Confidence            4899999999999999999999999999999998887766554 888999999999 8899999999999999997652 


Q ss_pred             ccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEE-----------
Q psy8430         238 CLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL-----------  306 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~-----------  306 (361)
                                               ++..+. |...|++++|+|+++++++|+.||.|++||++++.+.           
T Consensus        91 -------------------------~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~  144 (902)
T 2oaj_A           91 -------------------------VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSS  144 (902)
T ss_dssp             -------------------------EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHH
T ss_pred             -------------------------EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccc
Confidence                                     344443 6689999999999999999999999999999988764           


Q ss_pred             EEeecCCCCCeEEEEEcC----CCcccCCCeEEEEcCCCCCCCCcceeeeeeccc
Q psy8430         307 QSLTGHDEEPHILCVSSY----YSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDI  357 (361)
Q Consensus       307 ~~~~~h~~~v~~~~~s~s----~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h  357 (361)
                      ..+.+|.+.|.++.+++.    .+..+.||.| ||  |+   +. ..++..|.+|
T Consensus       145 ~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lW--d~---~~-~~~~~~~~~~  192 (902)
T 2oaj_A          145 FFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TY--SL---VE-NEIKQSFIYE  192 (902)
T ss_dssp             TCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EE--ET---TT-TEEEEEECCC
T ss_pred             cccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EE--EC---CC-CceEEEEecc
Confidence            234568888887555542    1112389999 99  77   33 4556667666

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.88  E-value=5.3e-22  Score=176.23  Aligned_cols=157  Identities=12%  Similarity=0.068  Sum_probs=133.3

Q ss_pred             EeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe---EEEEEeCCCCCeEEEEEecCCC-EEEEEECCCcEEEEe
Q psy8430         156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK---CVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQ  231 (361)
Q Consensus       156 ~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~---~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~lwd  231 (361)
                      ...+|.+.|++++|+|++.+|++|+.|+.|++||+.++.   ....+.+|...|.+++|+|+++ +|++++.||.|++||
T Consensus         6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd   85 (342)
T 1yfq_A            6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVD   85 (342)
T ss_dssp             CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred             cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEE
Confidence            345899999999999999999999999999999998776   3455567999999999999999 999999999999999


Q ss_pred             c-cccccccCCCCCCCCCCCCCCCCCceecccccEEEeC--CCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC------
Q psy8430         232 A-VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG--HSNVVIAADWLSDGEQVITASWDRVANLFDVET------  302 (361)
Q Consensus       232 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~------  302 (361)
                      + .++                           ....+.+  |...|.+++|+| +.++++++.|+.|++||+++      
T Consensus        86 ~~~~~---------------------------~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~  137 (342)
T 1yfq_A           86 LIGSP---------------------------SFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVI  137 (342)
T ss_dssp             SSSSS---------------------------SEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCE
T ss_pred             eccCC---------------------------ceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccc
Confidence            8 655                           3356677  999999999999 99999999999999999998      


Q ss_pred             ---CeEEEEeecCCCCCeEEEEEcCCC-cccCCCeEEEEcCCCCC
Q psy8430         303 ---GTILQSLTGHDEEPHILCVSSYYS-KVSCDLFQRIQHLDCGT  343 (361)
Q Consensus       303 ---~~~~~~~~~h~~~v~~~~~s~s~~-~v~~dg~i~iW~~d~~~  343 (361)
                         ++++..+. |...+.++.+++..+ ..+.||.|++|  |+.+
T Consensus       138 ~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~i~--d~~~  179 (342)
T 1yfq_A          138 AVKNLNSNNTK-VKNKIFTMDTNSSRLIVGMNNSQVQWF--RLPL  179 (342)
T ss_dssp             EEEESCSSSSS-SCCCEEEEEECSSEEEEEESTTEEEEE--ESSC
T ss_pred             cccCCeeeEEe-eCCceEEEEecCCcEEEEeCCCeEEEE--ECCc
Confidence               77777776 788888755544422 12389999999  7744

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.88  E-value=1.1e-21  Score=175.11  Aligned_cols=194  Identities=13%  Similarity=0.116  Sum_probs=145.7

Q ss_pred             ceeEEeeecCccceeeeEEeeccCCCeEEEEEcCC---CCEEEEEeCCCcEEEEeCCCCe-EEEEEeCCCCCeEEEEE--
Q psy8430         138 SKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPG---QPVLGSASADRTVRLWSTQTGK-CVLQYSGHSGSVNSVRF--  211 (361)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~---~~~l~s~s~d~~i~~wd~~~~~-~~~~~~~h~~~v~~v~~--  211 (361)
                      +..+..|............ .+|.+.|.+++|+|+   +.+|++|+.||.|++||+.+++ .+..+.+|...|.+++|  
T Consensus        43 d~~v~iw~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~  121 (357)
T 3i2n_A           43 TGVIQLYEIQHGDLKLLRE-IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIG  121 (357)
T ss_dssp             CEEEEEEEECSSSEEEEEE-EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEES
T ss_pred             CcEEEEEeCCCCcccceee-ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeecc
Confidence            5566667665544433333 379999999999998   6999999999999999999887 88899999999999965  


Q ss_pred             ----ecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCC----cEEEEE----E
Q psy8430         212 ----LPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSN----VVIAAD----W  279 (361)
Q Consensus       212 ----~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~----~  279 (361)
                          +|+++.|++++.||.|++||+.++..                         +...+..|.+    .+.+++    |
T Consensus       122 ~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~-------------------------~~~~~~~~~~~~~~~v~~~~~~~~~  176 (357)
T 3i2n_A          122 GLGIGEGAPEIVTGSRDGTVKVWDPRQKDD-------------------------PVANMEPVQGENKRDCWTVAFGNAY  176 (357)
T ss_dssp             GGGCC-CCCEEEEEETTSCEEEECTTSCSS-------------------------CSEEECCCTTSCCCCEEEEEEECCC
T ss_pred             ccccCCCccEEEEEeCCCeEEEEeCCCCCC-------------------------cceeccccCCCCCCceEEEEEEecc
Confidence                67899999999999999999876521                         3455544443    788888    7


Q ss_pred             cCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEc---CCC---cccCCCeEEEEcCCCCCCCCcc-eeee
Q psy8430         280 LSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSS---YYS---KVSCDLFQRIQHLDCGTSENPI-HSVC  352 (361)
Q Consensus       280 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~---s~~---~v~~dg~i~iW~~d~~~~~~~~-~~v~  352 (361)
                      +|++.++++++.|+.|++||+++++.... ..|...+.++.+++   ...   ..+.||.|++|  |+.+++... ....
T Consensus       177 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~--d~~~~~~~~~~~~~  253 (357)
T 3i2n_A          177 NQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVF--DMRTQHPTKGFASV  253 (357)
T ss_dssp             C-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEE--EEEEEETTTEEEEE
T ss_pred             CCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEE--eCcCCCcccceeee
Confidence            88999999999999999999999887544 55788888877765   311   23589999999  773322211 1122


Q ss_pred             eecccccC
Q psy8430         353 VFQDIQST  360 (361)
Q Consensus       353 ~~~~h~~~  360 (361)
                      .+.+|...
T Consensus       254 ~~~~~~~~  261 (357)
T 3i2n_A          254 SEKAHKST  261 (357)
T ss_dssp             EEECCSSC
T ss_pred             ccCCCcCC
Confidence            34477654

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.88  E-value=6.2e-21  Score=182.68  Aligned_cols=187  Identities=19%  Similarity=0.165  Sum_probs=155.7

Q ss_pred             ccceeEEeeecCcc------ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCC----CcEEEEeCCCCeEEEEEeCCCCC
Q psy8430         136 QTSKIVSSFKTSLL------SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD----RTVRLWSTQTGKCVLQYSGHSGS  205 (361)
Q Consensus       136 ~~~~~~~~~~~~~~------~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d----~~i~~wd~~~~~~~~~~~~h~~~  205 (361)
                      ..+..+..|.....      ....+..+.+|.+.|.+++|+|++.+|++++.|    +.|++||  .++.+..+.+|...
T Consensus        85 ~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~  162 (615)
T 1pgu_A           85 DESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQR  162 (615)
T ss_dssp             ETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSC
T ss_pred             cCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCcc
Confidence            33445556665444      567888999999999999999999999999988    6888888  67788899999999


Q ss_pred             eEEEEEecCCC-EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCC---cEEEEEEcC
Q psy8430         206 VNSVRFLPNKD-LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSN---VVIAADWLS  281 (361)
Q Consensus       206 v~~v~~~~~~~-~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~  281 (361)
                      |.+++|+|++. .+++++.|+.|++||+.+.                          .....+.+|..   .|.+++|+|
T Consensus       163 v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~--------------------------~~~~~~~~~~~~~~~v~~~~~~~  216 (615)
T 1pgu_A          163 INACHLKQSRPMRSMTVGDDGSVVFYQGPPF--------------------------KFSASDRTHHKQGSFVRDVEFSP  216 (615)
T ss_dssp             EEEEEECSSSSCEEEEEETTTEEEEEETTTB--------------------------EEEEEECSSSCTTCCEEEEEECS
T ss_pred             EEEEEECCCCCcEEEEEeCCCcEEEEeCCCc--------------------------ceeeeecccCCCCceEEEEEECC
Confidence            99999999998 8999999999999998755                          35667788998   999999999


Q ss_pred             C-CCEEEEEeCCCcEEEeeCCCCeEEEEe-e---cCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeee
Q psy8430         282 D-GEQVITASWDRVANLFDVETGTILQSL-T---GHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCV  353 (361)
Q Consensus       282 ~-~~~l~s~~~d~~v~iwd~~~~~~~~~~-~---~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~  353 (361)
                      + ++++++++.|+.|++||+++++.+..+ .   .|...|.++.++ +..   ..+.||.|++|  |+   +. ..++..
T Consensus       217 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~w--d~---~~-~~~~~~  289 (615)
T 1pgu_A          217 DSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVW--DV---TT-SKCVQK  289 (615)
T ss_dssp             TTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEE--ET---TT-TEEEEE
T ss_pred             CCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEE--EC---CC-CcEEEE
Confidence            9 999999999999999999999999999 6   899999886554 311   22489999999  77   33 455666


Q ss_pred             eccc
Q psy8430         354 FQDI  357 (361)
Q Consensus       354 ~~~h  357 (361)
                      +..|
T Consensus       290 ~~~~  293 (615)
T 1pgu_A          290 WTLD  293 (615)
T ss_dssp             EECC
T ss_pred             EcCC
Confidence            6665

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.88  E-value=1.3e-20  Score=171.03  Aligned_cols=157  Identities=25%  Similarity=0.317  Sum_probs=130.9

Q ss_pred             ccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC---CCEEEEEECCCcEEEEeccc
Q psy8430         159 GHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN---KDLVLSASGDKSVHIWQAVI  234 (361)
Q Consensus       159 ~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~---~~~l~s~~~d~~i~lwd~~~  234 (361)
                      +|.+.|.+++|+| ++.+|++++.|+.|++||+.+++.+..+. +...+.++.|+|.   +.++++++.|+.|++||+.+
T Consensus        97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~  175 (408)
T 4a11_B           97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS  175 (408)
T ss_dssp             CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred             cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence            5999999999999 77899999999999999999999888887 8889999999984   44999999999999999876


Q ss_pred             cccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEeeCCCCe-EEEEe---
Q psy8430         235 NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITASWDRVANLFDVETGT-ILQSL---  309 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~-~~~~~---  309 (361)
                      +                          .....+.+|...|.+++|+|++. .+++++.||.|++||++++. ++..+   
T Consensus       176 ~--------------------------~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~  229 (408)
T 4a11_B          176 G--------------------------SCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQH  229 (408)
T ss_dssp             S--------------------------CCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTT
T ss_pred             c--------------------------ceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccccccccc
Confidence            5                          25677888999999999999999 58999999999999998765 44444   


Q ss_pred             ------------ecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCC
Q psy8430         310 ------------TGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTS  344 (361)
Q Consensus       310 ------------~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~  344 (361)
                                  ..|...|.++.+++...   ..+.||.|++|  |+.++
T Consensus       230 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw--d~~~~  277 (408)
T 4a11_B          230 NGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLW--NSSNG  277 (408)
T ss_dssp             TTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEE--ETTTC
T ss_pred             ccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEE--ECCCC
Confidence                        56777787755444321   12389999999  66443

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.87  E-value=2.1e-20  Score=171.22  Aligned_cols=161  Identities=19%  Similarity=0.349  Sum_probs=133.8

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe----EEEEEeCCCCCeEEEEEecCCC-EEEEE--ECC
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK----CVLQYSGHSGSVNSVRFLPNKD-LVLSA--SGD  224 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~----~~~~~~~h~~~v~~v~~~~~~~-~l~s~--~~d  224 (361)
                      ..+.++.+|...+.++.|+|++.++++++.|+.+++|+..+++    .+.....|...|.+++|+|.+. .++++  +.|
T Consensus       221 ~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D  300 (420)
T 4gga_A          221 HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD  300 (420)
T ss_dssp             CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTT
T ss_pred             eeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCC
Confidence            4667889999999999999999999999999999999998764    3566778999999999999654 55554  479


Q ss_pred             CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe--CCCcEEEeeCCC
Q psy8430         225 KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS--WDRVANLFDVET  302 (361)
Q Consensus       225 ~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~d~~v~iwd~~~  302 (361)
                      ++|++||+.++.                          +...+. +...+.++.|+|++..+++++  .|+.|+|||+.+
T Consensus       301 ~~I~iwd~~t~~--------------------------~~~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~  353 (420)
T 4gga_A          301 RHIRIWNVCSGA--------------------------CLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT  353 (420)
T ss_dssp             CEEEEEETTTTE--------------------------EEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT
T ss_pred             CEEEEEeCCccc--------------------------cceeec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCC
Confidence            999999998762                          344444 446788999999999998876  689999999999


Q ss_pred             CeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCC
Q psy8430         303 GTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDC  341 (361)
Q Consensus       303 ~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~  341 (361)
                      ++++.++.+|.+.|.++.+++++.   +.+.||+|+||  |+
T Consensus       354 ~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriW--dv  393 (420)
T 4gga_A          354 MAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLW--RC  393 (420)
T ss_dssp             CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEE--CC
T ss_pred             CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEE--EC
Confidence            999999999999999966655422   23499999999  66

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.87  E-value=2.2e-21  Score=172.90  Aligned_cols=179  Identities=8%  Similarity=-0.030  Sum_probs=139.4

Q ss_pred             eeeeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC---------CCeEEEEEe-
Q psy8430         131 NKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ---------TGKCVLQYS-  200 (361)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~---------~~~~~~~~~-  200 (361)
                      ....+..+..+..|...  +++.+..+.  .+.|.++.|+|+   +++|+.|++|++|+..         +++.+..+. 
T Consensus        50 ~l~sg~~Dg~v~iwd~~--~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~  122 (343)
T 3lrv_A           50 VCMCRCEDGALHFTQLK--DSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEV  122 (343)
T ss_dssp             EEEEEEETTEEEEEEES--SSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred             EEEEECCCCcEEEEECC--CCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeec
Confidence            34455666667666654  344555555  567888899998   9999999999999665         455455554 


Q ss_pred             CCCCCeEEEEEec--CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEE
Q psy8430         201 GHSGSVNSVRFLP--NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAA  277 (361)
Q Consensus       201 ~h~~~v~~v~~~~--~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~  277 (361)
                      +|.+.|.+++|+|  +++++++++.||+|++||+.++.                          +.... ..|...+.++
T Consensus       123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~--------------------------~~~~~~~~~~~~i~~~  176 (343)
T 3lrv_A          123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS--------------------------QYIVHSAKSDVEYSSG  176 (343)
T ss_dssp             CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC--------------------------EEEEECCCSSCCCCEE
T ss_pred             CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc--------------------------EEEEEecCCCCceEEE
Confidence            6778999999999  99999999999999999997652                          22333 2355679999


Q ss_pred             EEcCCCCEEEEEeCCCcEEEeeCCCCeEE-EEeec-CCCCCeEEEEEcCCC--cccCCCeEEEEcCCCCCC
Q psy8430         278 DWLSDGEQVITASWDRVANLFDVETGTIL-QSLTG-HDEEPHILCVSSYYS--KVSCDLFQRIQHLDCGTS  344 (361)
Q Consensus       278 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~-~~~~~-h~~~v~~~~~s~s~~--~v~~dg~i~iW~~d~~~~  344 (361)
                      +|+|+|.++++|+.||.|++||+++++.+ ..+.. |...|.++.+++...  ..+.|+.|+||  |++++
T Consensus       177 ~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iw--d~~~~  245 (343)
T 3lrv_A          177 VLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCF--DLRKD  245 (343)
T ss_dssp             EECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEE--ETTSS
T ss_pred             EECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEE--EcCCC
Confidence            99999999999999999999999999988 88888 999999988776633  23446799999  87443

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.87  E-value=1.4e-21  Score=177.59  Aligned_cols=153  Identities=16%  Similarity=0.095  Sum_probs=112.4

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE-----EEeCCCCCeEEEEEec--------CCCEEEEEECCC
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL-----QYSGHSGSVNSVRFLP--------NKDLVLSASGDK  225 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~-----~~~~h~~~v~~v~~~~--------~~~~l~s~~~d~  225 (361)
                      .|.+.+....+++++.+|++|+.|++|++||..++....     .+.+|.+.|++|+|+|        ++++|++|+.|+
T Consensus        87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~  166 (393)
T 4gq1_A           87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC  166 (393)
T ss_dssp             ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred             ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence            344445445556677799999999999999998886433     3568999999999998        788999999999


Q ss_pred             cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEeeCCCCe
Q psy8430         226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITASWDRVANLFDVETGT  304 (361)
Q Consensus       226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~  304 (361)
                      +|+|||+.++                          .+...+.+|...+.+++|+|++. +|++++.|++|++||+++++
T Consensus       167 tv~~Wd~~~~--------------------------~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~  220 (393)
T 4gq1_A          167 TLIIWRLTDE--------------------------GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNL  220 (393)
T ss_dssp             EEEEEEEETT--------------------------EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC
T ss_pred             eEEEEECCCC--------------------------ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCc
Confidence            9999998655                          25666778999999999999875 79999999999999999876


Q ss_pred             EEEEe-------------------------ecCCCCCeE---------EEEEcCCCcccCCCeEEEEcCCCCCC
Q psy8430         305 ILQSL-------------------------TGHDEEPHI---------LCVSSYYSKVSCDLFQRIQHLDCGTS  344 (361)
Q Consensus       305 ~~~~~-------------------------~~h~~~v~~---------~~~s~s~~~v~~dg~i~iW~~d~~~~  344 (361)
                      .....                         .+|...+.+         .+++++     .|+.+++|  |+.++
T Consensus       221 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s-----~d~~i~vw--d~~~~  287 (393)
T 4gq1_A          221 SAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMC-----KSGAWLRW--NLFAN  287 (393)
T ss_dssp             ----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEEC-----TTSEEEEE--EC---
T ss_pred             ccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEe-----CCCCEEEE--ECccC
Confidence            54333                         234444444         455566     99999999  77443

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.87  E-value=6.3e-21  Score=170.85  Aligned_cols=175  Identities=12%  Similarity=0.056  Sum_probs=124.9

Q ss_pred             CCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecccc-cccc
Q psy8430         162 DGVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN-WECL  239 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l-~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~-~~~~  239 (361)
                      ..+..+++.++++.+ ++|+.|++|++||+.+++.+..+. +...|.+++|+++  .++.+ .|+.|++||+.+. ..+.
T Consensus        59 ~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~--~~~~~-~~~~i~i~d~~~~~~~~~  134 (355)
T 3vu4_A           59 RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSRE--FIVVS-YGDVISVFKFGNPWKRIT  134 (355)
T ss_dssp             SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSS--EEEEE-ETTEEEEEESSTTCCBSS
T ss_pred             CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCC--EEEEE-EcCEEEEEECCCCceeeE
Confidence            357788888888876 567788999999999999998887 7789999999875  33333 4778888888766 2222


Q ss_pred             CCCCC--------CCCCC--CCCCC-CCceecc-----------------cc-cEEEeCCCCcEEEEEEcCCCCEEEEEe
Q psy8430         240 NNDND--------SDLDE--SKEPD-ESSITLR-----------------TP-VKELLGHSNVVIAADWLSDGEQVITAS  290 (361)
Q Consensus       240 ~~~~~--------~~~~~--~~~~~-~~~~~~~-----------------~~-~~~~~~~~~~v~~~~~~~~~~~l~s~~  290 (361)
                      .....        .....  ..... ...+...                 .+ ...+.+|...|.+++|+|+|++|++|+
T Consensus       135 ~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s  214 (355)
T 3vu4_A          135 DDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCS  214 (355)
T ss_dssp             CCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred             EeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEe
Confidence            11100        00000  00000 0001111                 12 678899999999999999999999999


Q ss_pred             CCCc-EEEeeCCCCeEEEEee-c-CCCCCeEEEEEcCCC---cccCCCeEEEEcCCCC
Q psy8430         291 WDRV-ANLFDVETGTILQSLT-G-HDEEPHILCVSSYYS---KVSCDLFQRIQHLDCG  342 (361)
Q Consensus       291 ~d~~-v~iwd~~~~~~~~~~~-~-h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~  342 (361)
                      .|++ |++||+++++++.++. + |...|.++.+++++.   ..+.|+.|+||  |+.
T Consensus       215 ~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw--~~~  270 (355)
T 3vu4_A          215 QDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVF--EIF  270 (355)
T ss_dssp             TTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEE--ESS
T ss_pred             CCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEE--Ecc
Confidence            9998 9999999999999998 5 999999865555422   22499999999  663

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.86  E-value=3.9e-20  Score=170.66  Aligned_cols=158  Identities=11%  Similarity=0.120  Sum_probs=123.7

Q ss_pred             eeEEeeccCC-----CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe-------EEEEE----eCCCCCeEEEEEecCCC
Q psy8430         153 KIRSFSGHRD-----GVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-------CVLQY----SGHSGSVNSVRFLPNKD  216 (361)
Q Consensus       153 ~~~~l~~h~~-----~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~-------~~~~~----~~h~~~v~~v~~~~~~~  216 (361)
                      ++..+. |..     .|.+++|+|||++|++|+.||+|++||+.++.       .+.++    .+|...|.+++|+|+| 
T Consensus       117 ~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-  194 (588)
T 2j04_A          117 MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-  194 (588)
T ss_dssp             EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-
T ss_pred             eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-
Confidence            666667 765     49999999999999999999999999998875       36776    5778899999999999 


Q ss_pred             EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEeCCCcE
Q psy8430         217 LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASWDRVA  295 (361)
Q Consensus       217 ~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~v  295 (361)
                       +++++.|++|++||+..+..                       ......+ .+|...|.+++|+  |..+++++ +++|
T Consensus       195 -Laass~D~tVrlWd~~~~~~-----------------------~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tI  247 (588)
T 2j04_A          195 -LVAALSNNSVFSMTVSASSH-----------------------QPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYV  247 (588)
T ss_dssp             -EEEEETTCCEEEECCCSSSS-----------------------CCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEE
T ss_pred             -EEEEeCCCeEEEEECCCCcc-----------------------ccceeeecccccCcEEEEEEE--CCEEEEEe-CCeE
Confidence             88999999999999875521                       0123445 3788999999999  68999887 6999


Q ss_pred             EEeeCCCCeEEEEeecCCCCCeEEEE--EcCC--Cccc-CCCeEEEEcCC
Q psy8430         296 NLFDVETGTILQSLTGHDEEPHILCV--SSYY--SKVS-CDLFQRIQHLD  340 (361)
Q Consensus       296 ~iwd~~~~~~~~~~~~h~~~v~~~~~--s~s~--~~v~-~dg~i~iW~~d  340 (361)
                      ++||+.+++......+|...+..+.+  ++..  +.++ .||+ ++|.+|
T Consensus       248 kLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d  296 (588)
T 2j04_A          248 HKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED  296 (588)
T ss_dssp             EEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred             EEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence            99999988774444479988886444  3331  1111 7999 999433

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.86  E-value=1.4e-19  Score=158.84  Aligned_cols=162  Identities=20%  Similarity=0.337  Sum_probs=133.5

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe----EEEEEeCCCCCeEEEEEecCCCEE---EEEEC
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK----CVLQYSGHSGSVNSVRFLPNKDLV---LSASG  223 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~----~~~~~~~h~~~v~~v~~~~~~~~l---~s~~~  223 (361)
                      ...+..+.+|...+.++.+++++.+|++++.|++|++||+.+++    .......|.+.|.+++++|.+..+   ++++.
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~  219 (318)
T 4ggc_A          140 EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS  219 (318)
T ss_dssp             SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTT
T ss_pred             ceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCC
Confidence            35677888999999999999999999999999999999998764    344556788999999999976543   35667


Q ss_pred             CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe--CCCcEEEeeCC
Q psy8430         224 DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS--WDRVANLFDVE  301 (361)
Q Consensus       224 d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~d~~v~iwd~~  301 (361)
                      ++.|++||....                           .......+...+..+.|+|++..+++++  .|+.|++||++
T Consensus       220 ~~~i~lwd~~~~---------------------------~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~  272 (318)
T 4ggc_A          220 DRHIRIWNVCSG---------------------------ACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYP  272 (318)
T ss_dssp             TCEEEEEETTTC---------------------------CEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETT
T ss_pred             CCEEEEEecccc---------------------------cccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECC
Confidence            899999998755                           2334455778899999999999988765  79999999999


Q ss_pred             CCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCC
Q psy8430         302 TGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDC  341 (361)
Q Consensus       302 ~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~  341 (361)
                      +++++.++.+|.+.|.++.+++++.   +.+.||+|+||  |+
T Consensus       273 ~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iW--d~  313 (318)
T 4ggc_A          273 TMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLW--RC  313 (318)
T ss_dssp             TCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEE--CC
T ss_pred             CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEE--EC
Confidence            9999999999999999965554422   23499999999  76

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.83  E-value=3.9e-19  Score=159.14  Aligned_cols=99  Identities=17%  Similarity=0.291  Sum_probs=87.4

Q ss_pred             EeCCCcEEEEeCCCCe----------------EEEEEeCCCCCeEEEEEecCCCEEEEEECCCc-EEEEeccccccccCC
Q psy8430         179 ASADRTVRLWSTQTGK----------------CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS-VHIWQAVINWECLNN  241 (361)
Q Consensus       179 ~s~d~~i~~wd~~~~~----------------~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~-i~lwd~~~~~~~~~~  241 (361)
                      |+.||+|++||+.++.                .+..+.+|.+.|.+++|+|++++|++|+.|++ |++||++++      
T Consensus       155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~------  228 (355)
T 3vu4_A          155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG------  228 (355)
T ss_dssp             SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC------
T ss_pred             CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC------
Confidence            5788999999998765                26788999999999999999999999999998 999999866      


Q ss_pred             CCCCCCCCCCCCCCCceecccccEEEe-C-CCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC
Q psy8430         242 DNDSDLDESKEPDESSITLRTPVKELL-G-HSNVVIAADWLSDGEQVITASWDRVANLFDVETG  303 (361)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~  303 (361)
                                          .++..+. + |...|.+++|+|+|++|++++.|++|++||++.+
T Consensus       229 --------------------~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~  272 (355)
T 3vu4_A          229 --------------------VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND  272 (355)
T ss_dssp             --------------------CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred             --------------------cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence                                2566776 5 9999999999999999999999999999999765

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.83  E-value=7.4e-20  Score=168.10  Aligned_cols=155  Identities=12%  Similarity=0.053  Sum_probs=122.2

Q ss_pred             ccCCCeEEEEEcCCCCEEE----EEeCCCcEEEEeCCCC--------e---EEEEEeCCCCCeEEEEEecC-CCEEEEEE
Q psy8430         159 GHRDGVWDVAVRPGQPVLG----SASADRTVRLWSTQTG--------K---CVLQYSGHSGSVNSVRFLPN-KDLVLSAS  222 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~----s~s~d~~i~~wd~~~~--------~---~~~~~~~h~~~v~~v~~~~~-~~~l~s~~  222 (361)
                      .|.+.|++++|+|+|++|+    +|+.|++|++||+.++        +   .+..+.+|...|.+++|+|+ +.+|++++
T Consensus        90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s  169 (434)
T 2oit_A           90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL  169 (434)
T ss_dssp             CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred             cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence            3667899999999999999    7889999999998654        2   24556679999999999997 88999999


Q ss_pred             CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC
Q psy8430         223 GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET  302 (361)
Q Consensus       223 ~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~  302 (361)
                      .||+|++||++++.                          ......+|...|.+++|+|+|++|++|+.||.|++||++ 
T Consensus       170 ~Dg~v~iwD~~~~~--------------------------~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-  222 (434)
T 2oit_A          170 ADGSIAVLQVTETV--------------------------KVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-  222 (434)
T ss_dssp             TTSCEEEEEESSSE--------------------------EEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-
T ss_pred             CCCeEEEEEcCCCc--------------------------ceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-
Confidence            99999999997651                          344556788999999999999999999999999999998 


Q ss_pred             CeEEEEeecCCC-------CCeEEEEEcCCCcc----cCCC------eEEEEcCCCC
Q psy8430         303 GTILQSLTGHDE-------EPHILCVSSYYSKV----SCDL------FQRIQHLDCG  342 (361)
Q Consensus       303 ~~~~~~~~~h~~-------~v~~~~~s~s~~~v----~~dg------~i~iW~~d~~  342 (361)
                      ++....+..|..       .+.++.+++.+.++    ..||      .+++|  |+.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~--~l~  277 (434)
T 2oit_A          223 LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMA--LLP  277 (434)
T ss_dssp             CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEE--ECC
T ss_pred             CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEE--Eec
Confidence            666666655432       45555555542222    1333      48999  663

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.81  E-value=1.1e-17  Score=151.40  Aligned_cols=173  Identities=12%  Similarity=0.129  Sum_probs=131.2

Q ss_pred             ccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC
Q psy8430         136 QTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN  214 (361)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l-~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~  214 (361)
                      ..+..+..|..  .+++.+..+.+|.. +.+++|+|+|.++ ++++.|++|++||+.+++.+..+..+. .+.+++|+|+
T Consensus         9 ~~d~~v~v~d~--~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spd   84 (391)
T 1l0q_A            9 SESDNISVIDV--TSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPD   84 (391)
T ss_dssp             TTTTEEEEEET--TTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTT
T ss_pred             CCCCEEEEEEC--CCCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCC
Confidence            33445555554  34566777777754 8999999999976 677799999999999999988888554 9999999999


Q ss_pred             CCEEEEE-ECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEE-EEEeCC
Q psy8430         215 KDLVLSA-SGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV-ITASWD  292 (361)
Q Consensus       215 ~~~l~s~-~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~d  292 (361)
                      ++.++.+ +.|+.|++||+.++.                          ....+. +...+.+++|+|+++++ ++++.|
T Consensus        85 g~~l~~~~~~~~~v~v~d~~~~~--------------------------~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~  137 (391)
T 1l0q_A           85 GKQVYVTNMASSTLSVIDTTSNT--------------------------VAGTVK-TGKSPLGLALSPDGKKLYVTNNGD  137 (391)
T ss_dssp             SSEEEEEETTTTEEEEEETTTTE--------------------------EEEEEE-CSSSEEEEEECTTSSEEEEEETTT
T ss_pred             CCEEEEEECCCCEEEEEECCCCe--------------------------EEEEEe-CCCCcceEEECCCCCEEEEEeCCC
Confidence            9987554 467999999997652                          333343 34578999999999988 678889


Q ss_pred             CcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC--c--ccCCCeEEEEcCCCC
Q psy8430         293 RVANLFDVETGTILQSLTGHDEEPHILCVSSYYS--K--VSCDLFQRIQHLDCG  342 (361)
Q Consensus       293 ~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~--~--v~~dg~i~iW~~d~~  342 (361)
                      +.|++||+.+++.+..+..+.. +..+.++....  +  ...|+.|++|  |+.
T Consensus       138 ~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~dg~~l~~~~~~~~~v~~~--d~~  188 (391)
T 1l0q_A          138 KTVSVINTVTKAVINTVSVGRS-PKGIAVTPDGTKVYVANFDSMSISVI--DTV  188 (391)
T ss_dssp             TEEEEEETTTTEEEEEEECCSS-EEEEEECTTSSEEEEEETTTTEEEEE--ETT
T ss_pred             CEEEEEECCCCcEEEEEecCCC-cceEEECCCCCEEEEEeCCCCEEEEE--ECC
Confidence            9999999999999988876644 34544443311  1  1289999999  773

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.79  E-value=3.3e-17  Score=148.16  Aligned_cols=174  Identities=14%  Similarity=0.105  Sum_probs=132.6

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEE-EEEECCCc
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV-LSASGDKS  226 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l-~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~~~d~~  226 (361)
                      .+++.+..+..| ..+.+++|+|+++.| ++++.|+.|++||+.+++.+..+..+ ..+.+++|+|+++.+ ++++.|+.
T Consensus       104 ~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~  181 (391)
T 1l0q_A          104 TSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMS  181 (391)
T ss_dssp             TTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTE
T ss_pred             CCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCE
Confidence            344556666655 568999999999977 78888999999999999998888854 567999999999887 57778999


Q ss_pred             EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe---CCCcEEEeeCCCC
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS---WDRVANLFDVETG  303 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~---~d~~v~iwd~~~~  303 (361)
                      |++||+.++.                          ....+ .+...+.+++|+|+|+++++++   .++.|++||+.++
T Consensus       182 v~~~d~~~~~--------------------------~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~  234 (391)
T 1l0q_A          182 ISVIDTVTNS--------------------------VIDTV-KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN  234 (391)
T ss_dssp             EEEEETTTTE--------------------------EEEEE-ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT
T ss_pred             EEEEECCCCe--------------------------EEEEE-ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC
Confidence            9999997652                          22333 3566889999999999999988   6899999999999


Q ss_pred             eEEEEeecCCCCCeEEEEEcCC--Cc--ccCCCeEEEEcCCCCCCCCcceeeeeecccc
Q psy8430         304 TILQSLTGHDEEPHILCVSSYY--SK--VSCDLFQRIQHLDCGTSENPIHSVCVFQDIQ  358 (361)
Q Consensus       304 ~~~~~~~~h~~~v~~~~~s~s~--~~--v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~  358 (361)
                      +.+..+..|.. +.++.+++..  ++  .+.|+.|++|  |+.+    ..++..+..|.
T Consensus       235 ~~~~~~~~~~~-~~~~~~s~dg~~l~~s~~~d~~v~v~--d~~~----~~~~~~~~~~~  286 (391)
T 1l0q_A          235 KITARIPVGPD-PAGIAVTPDGKKVYVALSFXNTVSVI--DTAT----NTITATMAVGK  286 (391)
T ss_dssp             EEEEEEECCSS-EEEEEECTTSSEEEEEETTTTEEEEE--ETTT----TEEEEEEECSS
T ss_pred             eEEEEEecCCC-ccEEEEccCCCEEEEEcCCCCEEEEE--ECCC----CcEEEEEECCc
Confidence            99998887654 4444444331  11  1389999999  7733    44555665554

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.77  E-value=2.7e-17  Score=150.83  Aligned_cols=156  Identities=9%  Similarity=0.071  Sum_probs=125.2

Q ss_pred             EeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEE-ECCCcEEEEeccc
Q psy8430         156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA-SGDKSVHIWQAVI  234 (361)
Q Consensus       156 ~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~-~~d~~i~lwd~~~  234 (361)
                      .+.+|.+.|++++|+|++.++++++.|+.|++||+.+++.+..+..|...+.+++|+|+++.++++ +.|+.|++||+.+
T Consensus       164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~  243 (433)
T 3bws_A          164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKT  243 (433)
T ss_dssp             HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred             cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCC
Confidence            456899999999999999999999999999999999999999999999999999999999987554 4799999999876


Q ss_pred             cccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe--------CCCcEEEeeCCCCeEE
Q psy8430         235 NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS--------WDRVANLFDVETGTIL  306 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--------~d~~v~iwd~~~~~~~  306 (361)
                      +.                          ....+. +...+.+++|+|+|+++++++        .|+.|++||+++++.+
T Consensus       244 ~~--------------------------~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~  296 (433)
T 3bws_A          244 KL--------------------------EIRKTD-KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLI  296 (433)
T ss_dssp             TE--------------------------EEEECC-CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEE
T ss_pred             Cc--------------------------EEEEec-CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEE
Confidence            52                          233333 345689999999999999988        5889999999999887


Q ss_pred             EEeecCCCCCeEEEEEcCC--Ccc--cCCCeEEEEcCCC
Q psy8430         307 QSLTGHDEEPHILCVSSYY--SKV--SCDLFQRIQHLDC  341 (361)
Q Consensus       307 ~~~~~h~~~v~~~~~s~s~--~~v--~~dg~i~iW~~d~  341 (361)
                      ..+. |...+..+.+++..  +++  +.|+.|++|  |+
T Consensus       297 ~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~--d~  332 (433)
T 3bws_A          297 DTIG-PPGNKRHIVSGNTENKIYVSDMCCSKIEVY--DL  332 (433)
T ss_dssp             EEEE-EEECEEEEEECSSTTEEEEEETTTTEEEEE--ET
T ss_pred             eecc-CCCCcceEEECCCCCEEEEEecCCCEEEEE--EC
Confidence            7663 33445554444332  111  389999999  66

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.74  E-value=2.2e-17  Score=151.62  Aligned_cols=162  Identities=10%  Similarity=-0.032  Sum_probs=121.0

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC----------eEE------EEEeCCCCCeEEEEEecCCCEEE----E
Q psy8430         161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG----------KCV------LQYSGHSGSVNSVRFLPNKDLVL----S  220 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~----------~~~------~~~~~h~~~v~~v~~~~~~~~l~----s  220 (361)
                      ...++.+++++++.++++++.|+ +++|+....          ..+      ..+ .+...|.+++|+|++++|+    +
T Consensus        36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~~lav~~~s  113 (434)
T 2oit_A           36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCDNLTLSACMMS  113 (434)
T ss_dssp             CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTTSCEEEEEEEE
T ss_pred             CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCCCCEEEEEEec
Confidence            34688999999999999999998 888875210          011      122 3667899999999999999    7


Q ss_pred             EECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEee
Q psy8430         221 ASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD-GEQVITASWDRVANLFD  299 (361)
Q Consensus       221 ~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~v~iwd  299 (361)
                      ++.|+.|++||+.+.......               ..........+.+|...|.+++|+|+ +.+|++++.||+|++||
T Consensus       114 gs~d~~v~iwd~~~~~~~~~~---------------~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD  178 (434)
T 2oit_A          114 SEYGSIIAFFDVRTFSNEAKQ---------------QKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQ  178 (434)
T ss_dssp             TTTEEEEEEEEHHHHHCTTCS---------------SCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred             cCCCceEEEEEccccccCCcC---------------CcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEE
Confidence            888999999998754110000               00000123445679999999999997 89999999999999999


Q ss_pred             CCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCC
Q psy8430         300 VETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDC  341 (361)
Q Consensus       300 ~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~  341 (361)
                      ++++..+....+|...+.++.++..+.   ..+.||.|++|  |.
T Consensus       179 ~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iw--d~  221 (434)
T 2oit_A          179 VTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQY--LP  221 (434)
T ss_dssp             ESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEE--CT
T ss_pred             cCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEE--cc
Confidence            999988777778888898866654422   12489999999  77

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.73  E-value=6.7e-16  Score=141.50  Aligned_cols=173  Identities=9%  Similarity=-0.013  Sum_probs=132.1

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE-----
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLG-SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-----  222 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~-s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-----  222 (361)
                      .+++.+..+..|...+.+++|+|++..++ +++.|+.|++||+.+++.+..+.. ...+.+++|+|+++.+++++     
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~  277 (433)
T 3bws_A          199 KTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLPRGLLLSKDGKELYIAQFSASN  277 (433)
T ss_dssp             TTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEEEEEEECTTSSEEEEEEEESCT
T ss_pred             CCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCceEEEEcCCCCEEEEEECCCCc
Confidence            45567788889999999999999999775 455799999999999998888774 45699999999999999888     


Q ss_pred             ---CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEE-EEEeCCCcEEEe
Q psy8430         223 ---GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV-ITASWDRVANLF  298 (361)
Q Consensus       223 ---~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~d~~v~iw  298 (361)
                         .|+.|++||+.++.                           ......|...+.+++|+|+++++ ++++.|+.|++|
T Consensus       278 ~~~~dg~i~~~d~~~~~---------------------------~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~  330 (433)
T 3bws_A          278 QESGGGRLGIYSMDKEK---------------------------LIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVY  330 (433)
T ss_dssp             TCSCCEEEEEEETTTTE---------------------------EEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEE
T ss_pred             cccCCCeEEEEECCCCc---------------------------EEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEE
Confidence               58899999987652                           22223455688899999999765 566889999999


Q ss_pred             eCCCCeEEEEeecCCCCCeEEEEEcCC--Ccc----------------cCCCeEEEEcCCCCCCCCcceeeeeecc
Q psy8430         299 DVETGTILQSLTGHDEEPHILCVSSYY--SKV----------------SCDLFQRIQHLDCGTSENPIHSVCVFQD  356 (361)
Q Consensus       299 d~~~~~~~~~~~~h~~~v~~~~~s~s~--~~v----------------~~dg~i~iW~~d~~~~~~~~~~v~~~~~  356 (361)
                      |+.+++.+..+. +...+..+.+++.+  +++                +.||.|++|  |..+    ...+..+.+
T Consensus       331 d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~--d~~~----~~~~~~~~~  399 (433)
T 3bws_A          331 DLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVI--DTTT----DTVKEFWEA  399 (433)
T ss_dssp             ETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEE--ETTT----TEEEEEEEC
T ss_pred             ECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEE--ECCC----CcEEEEecC
Confidence            999999888876 55566665555442  121                126799999  7733    334445544

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.73  E-value=4.2e-16  Score=142.39  Aligned_cols=170  Identities=14%  Similarity=0.106  Sum_probs=129.3

Q ss_pred             eEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCC---cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC
Q psy8430         140 IVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADR---TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD  216 (361)
Q Consensus       140 ~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~---~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~  216 (361)
                      .+..|..+   +...+.+.+|.+.|.+++|+|+|+.|++++.|+   .|++||+.+++.. .+..|...+.+++|+|+|+
T Consensus       160 ~i~i~d~~---g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~  235 (415)
T 2hqs_A          160 ELRVSDYD---GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGS  235 (415)
T ss_dssp             EEEEEETT---SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSS
T ss_pred             eEEEEcCC---CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCC
Confidence            34444443   345678889999999999999999999999885   9999999998875 4667888999999999999


Q ss_pred             EEE-EEECCCc--EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC-
Q psy8430         217 LVL-SASGDKS--VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-  292 (361)
Q Consensus       217 ~l~-s~~~d~~--i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-  292 (361)
                      .|+ +++.|+.  |.+||+.++                           ....+..|...+.+++|+|+|++|++++.+ 
T Consensus       236 ~la~~~~~~g~~~i~~~d~~~~---------------------------~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~  288 (415)
T 2hqs_A          236 KLAFALSKTGSLNLYVMDLASG---------------------------QIRQVTDGRSNNTEPTWFPDSQNLAFTSDQA  288 (415)
T ss_dssp             EEEEEECTTSSCEEEEEETTTC---------------------------CEEECCCCSSCEEEEEECTTSSEEEEEECTT
T ss_pred             EEEEEEecCCCceEEEEECCCC---------------------------CEEeCcCCCCcccceEECCCCCEEEEEECCC
Confidence            877 6666665  899998765                           335666788899999999999999988864 


Q ss_pred             C--cEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCCc---ccC---CCeEEEEcCCCCC
Q psy8430         293 R--VANLFDVETGTILQSLTGHDEEPHILCVSSYYSK---VSC---DLFQRIQHLDCGT  343 (361)
Q Consensus       293 ~--~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~~---v~~---dg~i~iW~~d~~~  343 (361)
                      +  .|++||+.+++. ..+..+...+..+.+++++..   .+.   ++.|++|  |+.+
T Consensus       289 g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~--d~~~  344 (415)
T 2hqs_A          289 GRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQ--DLAT  344 (415)
T ss_dssp             SSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEE--ETTT
T ss_pred             CCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEE--ECCC
Confidence            4  688889988764 445556666666566655321   123   3689999  6633

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.70  E-value=2.1e-15  Score=137.81  Aligned_cols=168  Identities=13%  Similarity=0.055  Sum_probs=124.2

Q ss_pred             EEeeccCCCeEEEEEcCCCCEEE-EEeCCCc--EEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC-CC--cEE
Q psy8430         155 RSFSGHRDGVWDVAVRPGQPVLG-SASADRT--VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DK--SVH  228 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~~~~l~-s~s~d~~--i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~--~i~  228 (361)
                      ..+..|.+.+.+++|+|+|+.|+ +++.|+.  |++||+.+++. ..+..|...+.+++|+|+|+.|+.++. ++  .|.
T Consensus       216 ~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~  294 (415)
T 2hqs_A          216 RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVY  294 (415)
T ss_dssp             EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred             EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEE
Confidence            35778889999999999999777 6666655  99999988875 566778899999999999999888876 45  577


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC---CcEEEeeCCCCeE
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD---RVANLFDVETGTI  305 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~v~iwd~~~~~~  305 (361)
                      +||+.++                           ....+..+...+.+++|+|+|++|++++.+   ..|++||+.+++.
T Consensus       295 ~~d~~~~---------------------------~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~  347 (415)
T 2hqs_A          295 KVNINGG---------------------------APQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV  347 (415)
T ss_dssp             EEETTSS---------------------------CCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred             EEECCCC---------------------------CEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence            7787654                           233445567788999999999999988865   5799999999887


Q ss_pred             EEEeecCCCCCeEEEEEcCCCc---ccCCC---eEEEEcCCCCCCCCcceeeeeeccccc
Q psy8430         306 LQSLTGHDEEPHILCVSSYYSK---VSCDL---FQRIQHLDCGTSENPIHSVCVFQDIQS  359 (361)
Q Consensus       306 ~~~~~~h~~~v~~~~~s~s~~~---v~~dg---~i~iW~~d~~~~~~~~~~v~~~~~h~~  359 (361)
                      . .+..+. .+..+.+++++..   .+.|+   .|++|  |+   .  ...+..+.+|.+
T Consensus       348 ~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~--d~---~--g~~~~~l~~~~~  398 (415)
T 2hqs_A          348 Q-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLV--ST---D--GRFKARLPATDG  398 (415)
T ss_dssp             E-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEE--ET---T--SCCEEECCCSSS
T ss_pred             E-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEE--EC---C--CCcEEEeeCCCC
Confidence            4 455554 6666555554221   12444   78888  65   1  123556677655

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.62  E-value=2.1e-14  Score=123.87  Aligned_cols=158  Identities=13%  Similarity=-0.012  Sum_probs=115.9

Q ss_pred             EeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC-CeEEEEEeCC-CCCeEEEEEecCCCEEEEEE--CCCcEEEEe
Q psy8430         156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGH-SGSVNSVRFLPNKDLVLSAS--GDKSVHIWQ  231 (361)
Q Consensus       156 ~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~-~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~~--~d~~i~lwd  231 (361)
                      .+..|.+.|.+++|+|+|++|++++ ++.|.+||+.+ ++.......+ ...|.+++|+|+++.+++++  .++...||.
T Consensus        36 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~  114 (297)
T 2ojh_A           36 VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYL  114 (297)
T ss_dssp             EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEE
T ss_pred             eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEE
Confidence            4557899999999999999999987 78999999998 8777666655 37889999999999999998  445666665


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEE-EEeCCCcEEEeeC--CCCeEEEE
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI-TASWDRVANLFDV--ETGTILQS  308 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~d~~v~iwd~--~~~~~~~~  308 (361)
                      +....                         .....+.. ...+..++|+|++++++ +++.++.++||++  .++. ...
T Consensus       115 ~~~~~-------------------------~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~-~~~  167 (297)
T 2ojh_A          115 LPSTG-------------------------GTPRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV-ETR  167 (297)
T ss_dssp             EETTC-------------------------CCCEECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC-EEE
T ss_pred             EECCC-------------------------CceEEeec-CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCc-ceE
Confidence            53210                         02233333 33488899999999887 7888999999985  3443 456


Q ss_pred             eecCCCCCeEEEEEcCCC--c-cc-CCCeEEEEcCCC
Q psy8430         309 LTGHDEEPHILCVSSYYS--K-VS-CDLFQRIQHLDC  341 (361)
Q Consensus       309 ~~~h~~~v~~~~~s~s~~--~-v~-~dg~i~iW~~d~  341 (361)
                      +..+...+..+.+++...  . .+ .|+.++||+++.
T Consensus       168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~  204 (297)
T 2ojh_A          168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRV  204 (297)
T ss_dssp             CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred             cccCCCccccceECCCCCEEEEEecCCCCccEEEECC
Confidence            666777777766665532  1 12 589999995443

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.62  E-value=2e-13  Score=128.74  Aligned_cols=189  Identities=10%  Similarity=-0.024  Sum_probs=135.3

Q ss_pred             eEEeeecCccceeeeEEeeccCCCeEEEEEcC----CCCEEEEEeC-CCcEEEEeCCCCeEEEEEeCC-----------C
Q psy8430         140 IVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP----GQPVLGSASA-DRTVRLWSTQTGKCVLQYSGH-----------S  203 (361)
Q Consensus       140 ~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~----~~~~l~s~s~-d~~i~~wd~~~~~~~~~~~~h-----------~  203 (361)
                      .+..|.....+++.+.++.. ...+..++|+|    +|+++++++. +++|.+||..+++++..+..+           .
T Consensus       201 ~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~  279 (543)
T 1nir_A          201 RIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPE  279 (543)
T ss_dssp             EEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESC
T ss_pred             eEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccC
Confidence            34455543245677888874 45679999999    9999998885 899999999999998888752           2


Q ss_pred             CCeEEEEEecCCCE-EEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC
Q psy8430         204 GSVNSVRFLPNKDL-VLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD  282 (361)
Q Consensus       204 ~~v~~v~~~~~~~~-l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  282 (361)
                      ..+..+.++|++.. +++...++.|.+||+.+...+                        .+..+ .+...+..+.|+|+
T Consensus       280 ~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l------------------------~~~~i-~~~~~~~~~~~spd  334 (543)
T 1nir_A          280 PRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNL------------------------TVTSI-GAAPFLHDGGWDSS  334 (543)
T ss_dssp             CCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSC------------------------EEEEE-ECCSSCCCEEECTT
T ss_pred             CceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcc------------------------eeEEe-ccCcCccCceECCC
Confidence            37899999997665 566677899999998654210                        11122 35567788999999


Q ss_pred             CCEEEEEe-CCCcEEEeeCCCCeEEEEeec----CCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCC---
Q psy8430         283 GEQVITAS-WDRVANLFDVETGTILQSLTG----HDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSEN---  346 (361)
Q Consensus       283 ~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~----h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~---  346 (361)
                      |+++++++ .+++|.+||..+++++.++..    |.+....        +++|++    ..|++|+||  |+.+...   
T Consensus       335 g~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~----~~d~~V~v~--d~~~~~~~~~  408 (543)
T 1nir_A          335 HRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSH----LGDGSISLI--GTDPKNHPQY  408 (543)
T ss_dssp             SCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEB----SSSSEEEEE--ECCTTTCTTT
T ss_pred             CCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEecc----CCCceEEEE--EeCCCCCchh
Confidence            99877655 589999999999999998874    5433322        233331    158999999  5533111   


Q ss_pred             cceeeeeecccccC
Q psy8430         347 PIHSVCVFQDIQST  360 (361)
Q Consensus       347 ~~~~v~~~~~h~~~  360 (361)
                      ..+++.++.+|.+.
T Consensus       409 ~~~~v~~l~~~g~~  422 (543)
T 1nir_A          409 AWKKVAELQGQGGG  422 (543)
T ss_dssp             BTSEEEEEECSCSC
T ss_pred             cCeEEEEEEcCCCC
Confidence            15788899888653

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.61  E-value=3.6e-13  Score=119.54  Aligned_cols=165  Identities=7%  Similarity=-0.005  Sum_probs=124.4

Q ss_pred             cceeeeEEeeccCCC---------eEEEEEcCCCCEEEEEe--CCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCE
Q psy8430         149 LSCYKIRSFSGHRDG---------VWDVAVRPGQPVLGSAS--ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL  217 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~---------V~~l~~~~~~~~l~s~s--~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~  217 (361)
                      .+++.+..+..+.+.         +.+++|+|+|+.++.++  .++.|.+||..+++.+..+..+...+.+++|+|+++.
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~  198 (353)
T 3vgz_A          119 KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKR  198 (353)
T ss_dssp             TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTE
T ss_pred             CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCE
Confidence            455666666655432         78899999999777765  4789999999999988888766777899999999999


Q ss_pred             EEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe----CCCCcEEEEEEcCCCCEEEEEeCC-
Q psy8430         218 VLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL----GHSNVVIAADWLSDGEQVITASWD-  292 (361)
Q Consensus       218 l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~s~~~d-  292 (361)
                      +++++.++.|.+||+.++..                          ...+.    ++...+..++|+|+|++++.++.+ 
T Consensus       199 l~~~~~~~~i~~~d~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~  252 (353)
T 3vgz_A          199 LYTTNADGELITIDTADNKI--------------------------LSRKKLLDDGKEHFFINISLDTARQRAFITDSKA  252 (353)
T ss_dssp             EEEECTTSEEEEEETTTTEE--------------------------EEEEECCCSSSCCCEEEEEEETTTTEEEEEESSS
T ss_pred             EEEEcCCCeEEEEECCCCeE--------------------------EEEEEcCCCCCCcccceEEECCCCCEEEEEeCCC
Confidence            99999999999999876632                          22222    245578889999999988777654 


Q ss_pred             CcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCC--Ccc--cCCCeEEEEcCCCCC
Q psy8430         293 RVANLFDVETGTILQSLTGHDEEPHILCVSSYY--SKV--SCDLFQRIQHLDCGT  343 (361)
Q Consensus       293 ~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~--~~v--~~dg~i~iW~~d~~~  343 (361)
                      +.|.+||..+++.+..+..+..  ..+.+++..  +++  ..++.|.+|  |..+
T Consensus       253 ~~v~~~d~~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~~~v~~~--d~~~  303 (353)
T 3vgz_A          253 AEVLVVDTRNGNILAKVAAPES--LAVLFNPARNEAYVTHRQAGKVSVI--DAKS  303 (353)
T ss_dssp             SEEEEEETTTCCEEEEEECSSC--CCEEEETTTTEEEEEETTTTEEEEE--ETTT
T ss_pred             CEEEEEECCCCcEEEEEEcCCC--ceEEECCCCCEEEEEECCCCeEEEE--ECCC
Confidence            8999999999999888875432  223333331  122  268999999  7633

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.60  E-value=7.3e-13  Score=124.88  Aligned_cols=181  Identities=10%  Similarity=-0.061  Sum_probs=130.5

Q ss_pred             ceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeC--CCCeEEEEEeCCCCCeEEEEEec--
Q psy8430         138 SKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWST--QTGKCVLQYSGHSGSVNSVRFLP--  213 (361)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~--~~~~~~~~~~~h~~~v~~v~~~~--  213 (361)
                      +..+..|.  ..+++++.++..+.. +.+++|+|+|++|++++.|++|.+||+  .+++.+..+. +...+..++|+|  
T Consensus       158 d~~V~v~D--~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~  233 (543)
T 1nir_A          158 AGQIALVD--GDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFK  233 (543)
T ss_dssp             GTEEEEEE--TTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCST
T ss_pred             CCeEEEEE--CCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCc
Confidence            34444553  456677888884433 899999999999999999999999999  8899888888 567789999999  


Q ss_pred             --CCCEEEEEEC-CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC----------C-CCcEEEEEE
Q psy8430         214 --NKDLVLSASG-DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG----------H-SNVVIAADW  279 (361)
Q Consensus       214 --~~~~l~s~~~-d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~-~~~v~~~~~  279 (361)
                        +|+++++++. +++|.+||..+..                          ++..+..          | ...+.++.+
T Consensus       234 ~~dg~~l~v~~~~~~~v~v~D~~t~~--------------------------~~~~i~~~g~~~~~~~~~~~~~v~~i~~  287 (543)
T 1nir_A          234 GYEDRYTIAGAYWPPQFAIMDGETLE--------------------------PKQIVSTRGMTVDTQTYHPEPRVAAIIA  287 (543)
T ss_dssp             TCTTTEEEEEEEESSEEEEEETTTCC--------------------------EEEEEECCEECSSSCCEESCCCEEEEEE
T ss_pred             CCCCCEEEEEEccCCeEEEEeccccc--------------------------cceeecccCcccCccccccCCceEEEEE
Confidence              9999998884 8999999987653                          2333322          2 237899999


Q ss_pred             cCCCCE-EEEEeCCCcEEEeeCCCCeEEE--EeecCCCCCeEEEEEcCCC--cc--cCCCeEEEEcCCCCCCCCcceeee
Q psy8430         280 LSDGEQ-VITASWDRVANLFDVETGTILQ--SLTGHDEEPHILCVSSYYS--KV--SCDLFQRIQHLDCGTSENPIHSVC  352 (361)
Q Consensus       280 ~~~~~~-l~s~~~d~~v~iwd~~~~~~~~--~~~~h~~~v~~~~~s~s~~--~v--~~dg~i~iW~~d~~~~~~~~~~v~  352 (361)
                      +|++.. +++...++.|.+||+.+++.+.  ++. +...+..+.+++++-  ++  ..+++|.+|  |..+    ..++.
T Consensus       288 s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~--D~~t----g~l~~  360 (543)
T 1nir_A          288 SHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVI--DSKD----RRLSA  360 (543)
T ss_dssp             CSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEE--ETTT----TEEEE
T ss_pred             CCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEE--ECCC----CeEEE
Confidence            997665 5667778999999998876544  443 334444444444321  11  168999999  7743    33444


Q ss_pred             eec
Q psy8430         353 VFQ  355 (361)
Q Consensus       353 ~~~  355 (361)
                      .+.
T Consensus       361 ~i~  363 (543)
T 1nir_A          361 LVD  363 (543)
T ss_dssp             EEE
T ss_pred             eec
Confidence            444

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.56  E-value=1.1e-12  Score=115.46  Aligned_cols=173  Identities=13%  Similarity=0.105  Sum_probs=117.1

Q ss_pred             CeEEEEEcCCCCEEEEEe------------CCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEE
Q psy8430         163 GVWDVAVRPGQPVLGSAS------------ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  230 (361)
Q Consensus       163 ~V~~l~~~~~~~~l~s~s------------~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lw  230 (361)
                      .+.+++|+|+|++|++++            .++.|.+||+.+++.+..+.. ...+.+++|+|+++.++++  ++.|.+|
T Consensus        83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~  159 (337)
T 1pby_B           83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVM  159 (337)
T ss_dssp             CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEE
T ss_pred             cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEE
Confidence            677899999999888886            679999999999988877774 5678899999999988877  7899999


Q ss_pred             eccccccccCCCCCC-CCCCCCCCCCCc------------------------------------eecc--cc-cEEEeCC
Q psy8430         231 QAVINWECLNNDNDS-DLDESKEPDESS------------------------------------ITLR--TP-VKELLGH  270 (361)
Q Consensus       231 d~~~~~~~~~~~~~~-~~~~~~~~~~~~------------------------------------~~~~--~~-~~~~~~~  270 (361)
                      |+.++.......... .......++...                                    +...  .. ...+..+
T Consensus       160 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~  239 (337)
T 1pby_B          160 DPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM  239 (337)
T ss_dssp             ETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEEC
T ss_pred             ECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCC
Confidence            998776542211110 000000000000                                    0000  00 1122334


Q ss_pred             CCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC--cc-cCCCeEEEEcCCCCC
Q psy8430         271 SNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS--KV-SCDLFQRIQHLDCGT  343 (361)
Q Consensus       271 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~--~v-~~dg~i~iW~~d~~~  343 (361)
                      ...+.+++|+|+|++++++  ++.|.+||+.+++.+..+..+. .+.++.+++.+.  ++ +.|+.|++|  |+.+
T Consensus       240 ~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~i~v~--d~~~  310 (337)
T 1pby_B          240 DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPH-SYYSVNVSTDGSTVWLGGALGDLAAY--DAET  310 (337)
T ss_dssp             SSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSS-CCCEEEECTTSCEEEEESBSSEEEEE--ETTT
T ss_pred             CCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCC-ceeeEEECCCCCEEEEEcCCCcEEEE--ECcC
Confidence            4567789999999999988  7999999999999888876543 344544443311  11 379999999  7743

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.55  E-value=1.5e-12  Score=114.95  Aligned_cols=178  Identities=12%  Similarity=0.037  Sum_probs=120.0

Q ss_pred             ceeEEeeecCc-cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCC-CcEEEEeCC--CCe--EEEEEeCCCCCeEEEEE
Q psy8430         138 SKIVSSFKTSL-LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD-RTVRLWSTQ--TGK--CVLQYSGHSGSVNSVRF  211 (361)
Q Consensus       138 ~~~~~~~~~~~-~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d-~~i~~wd~~--~~~--~~~~~~~h~~~v~~v~~  211 (361)
                      +..+..|..+. ...+.+..+ .|...+.+++|+|+|++|++++.+ +.|.+|++.  ++.  .+..+..+. .+.+++|
T Consensus        14 ~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   91 (343)
T 1ri6_A           14 SQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHIST   91 (343)
T ss_dssp             GTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEE
T ss_pred             CCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEE
Confidence            44555565532 222334433 477889999999999988888887 999999997  554  444555443 8899999


Q ss_pred             ecCCCEEEEEEC-CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe
Q psy8430         212 LPNKDLVLSASG-DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS  290 (361)
Q Consensus       212 ~~~~~~l~s~~~-d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~  290 (361)
                      +|+++.+++++. ++.|.+||+..+.                       .......+. ....+.+++|+|+|+++++++
T Consensus        92 s~dg~~l~~~~~~~~~i~~~d~~~~~-----------------------~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~  147 (343)
T 1ri6_A           92 DHQGQFVFVGSYNAGNVSVTRLEDGL-----------------------PVGVVDVVE-GLDGCHSANISPDNRTLWVPA  147 (343)
T ss_dssp             CTTSSEEEEEETTTTEEEEEEEETTE-----------------------EEEEEEEEC-CCTTBCCCEECTTSSEEEEEE
T ss_pred             cCCCCEEEEEecCCCeEEEEECCCCc-----------------------ccccccccc-CCCCceEEEECCCCCEEEEec
Confidence            999998877665 8899999984210                       011233333 334588899999999988887


Q ss_pred             -CCCcEEEeeCCC-CeEEE----EeecC-CCCCeEEEEEcCCC--cc--cCCCeEEEEcCCC
Q psy8430         291 -WDRVANLFDVET-GTILQ----SLTGH-DEEPHILCVSSYYS--KV--SCDLFQRIQHLDC  341 (361)
Q Consensus       291 -~d~~v~iwd~~~-~~~~~----~~~~h-~~~v~~~~~s~s~~--~v--~~dg~i~iW~~d~  341 (361)
                       .++.|.+||+.+ ++...    .+..+ ...+..+.+++...  ++  ..++.|++|+++.
T Consensus       148 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~  209 (343)
T 1ri6_A          148 LKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD  209 (343)
T ss_dssp             GGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred             CCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence             899999999987 65432    23333 23444444544422  22  2789999995543

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.55  E-value=1.2e-12  Score=115.21  Aligned_cols=186  Identities=15%  Similarity=0.129  Sum_probs=121.6

Q ss_pred             ceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCeE-EEEEeCCCCCeEEEEEecCC
Q psy8430         138 SKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQTGKC-VLQYSGHSGSVNSVRFLPNK  215 (361)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~-d~~i~~wd~~~~~~-~~~~~~h~~~v~~v~~~~~~  215 (361)
                      +..+..|...  +++.+..+..+...+ +++|+|+|+++++++. ++.|.+||..+++. ...+..+..+..+++|+|++
T Consensus        19 ~~~v~~~d~~--~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg   95 (331)
T 3u4y_A           19 LRRISFFSTD--TLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDD   95 (331)
T ss_dssp             GTEEEEEETT--TCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTS
T ss_pred             CCeEEEEeCc--ccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCC
Confidence            3444455443  445566666666667 9999999996666655 89999999999887 77777666666669999999


Q ss_pred             CEEEEEECCC---cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEE-eC
Q psy8430         216 DLVLSASGDK---SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA-SW  291 (361)
Q Consensus       216 ~~l~s~~~d~---~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~  291 (361)
                      ++++++..++   .|.+||+.++.                          ....+. .......++|+|+|++++++ ..
T Consensus        96 ~~l~~~~~~~~~~~i~v~d~~~~~--------------------------~~~~~~-~~~~~~~~~~spdg~~l~~~~~~  148 (331)
T 3u4y_A           96 QFAVTVTGLNHPFNMQSYSFLKNK--------------------------FISTIP-IPYDAVGIAISPNGNGLILIDRS  148 (331)
T ss_dssp             SEEEECCCSSSSCEEEEEETTTTE--------------------------EEEEEE-CCTTEEEEEECTTSSCEEEEEET
T ss_pred             CEEEEecCCCCcccEEEEECCCCC--------------------------eEEEEE-CCCCccceEECCCCCEEEEEecC
Confidence            9998555443   89999987652                          233333 33456899999999866554 55


Q ss_pred             CCc-EEEeeCCCCeEE----EEeecCCCCCeEEEEEcCC--Ccc--cCCCeEEEEcCCCCCCCCcceeeeeecc
Q psy8430         292 DRV-ANLFDVETGTIL----QSLTGHDEEPHILCVSSYY--SKV--SCDLFQRIQHLDCGTSENPIHSVCVFQD  356 (361)
Q Consensus       292 d~~-v~iwd~~~~~~~----~~~~~h~~~v~~~~~s~s~--~~v--~~dg~i~iW~~d~~~~~~~~~~v~~~~~  356 (361)
                      ++. |.+|++.....+    ............+.+++++  +++  ..++.|++|  |+.+++. ...+..+..
T Consensus       149 ~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~--d~~~~~~-~~~~~~~~~  219 (331)
T 3u4y_A          149 SANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGIL--ETQNPEN-ITLLNAVGT  219 (331)
T ss_dssp             TTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEE--ECSSTTS-CEEEEEEEC
T ss_pred             CCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEE--ECCCCcc-cceeeeccC
Confidence            688 999998753322    1111223334455555442  222  268999999  6644333 222444443

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.54  E-value=1.5e-12  Score=115.53  Aligned_cols=168  Identities=8%  Similarity=-0.007  Sum_probs=124.0

Q ss_pred             CccceeeeEEeeccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCeEEEEEeCCCCC---------eEEEEEecCCC
Q psy8430         147 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGHSGS---------VNSVRFLPNKD  216 (361)
Q Consensus       147 ~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l-~s~s~d~~i~~wd~~~~~~~~~~~~h~~~---------v~~v~~~~~~~  216 (361)
                      +..+++.+..+... ..+..++|+|+|+.+ +++..++.|.+||..+++.+..+..+...         +.+++|+|+++
T Consensus        75 d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~  153 (353)
T 3vgz_A           75 DPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATN  153 (353)
T ss_dssp             CTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTT
T ss_pred             cCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCC
Confidence            33455666666543 447889999999955 55566799999999999988888755432         78999999999


Q ss_pred             EEEEEE--CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc
Q psy8430         217 LVLSAS--GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRV  294 (361)
Q Consensus       217 ~l~s~~--~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~  294 (361)
                      .++.++  .++.|.+||+.++.                          ....+..+...+..++|+|+|+++++++.++.
T Consensus       154 ~l~~~~~~~~~~i~~~d~~~~~--------------------------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~  207 (353)
T 3vgz_A          154 TVYISGIGKESVIWVVDGGNIK--------------------------LKTAIQNTGKMSTGLALDSEGKRLYTTNADGE  207 (353)
T ss_dssp             EEEEEEESSSCEEEEEETTTTE--------------------------EEEEECCCCTTCCCCEEETTTTEEEEECTTSE
T ss_pred             EEEEEecCCCceEEEEcCCCCc--------------------------eEEEecCCCCccceEEECCCCCEEEEEcCCCe
Confidence            877766  47889999987652                          33444435556788999999999999999999


Q ss_pred             EEEeeCCCCeEEEEeec----CCCCCeEEEEEcCC--Ccc--cCCCeEEEEcCCCCC
Q psy8430         295 ANLFDVETGTILQSLTG----HDEEPHILCVSSYY--SKV--SCDLFQRIQHLDCGT  343 (361)
Q Consensus       295 v~iwd~~~~~~~~~~~~----h~~~v~~~~~s~s~--~~v--~~dg~i~iW~~d~~~  343 (361)
                      |.+||..+++.+..+..    +...+..+.++++.  +++  ..++.|.+|  |..+
T Consensus       208 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~--d~~~  262 (353)
T 3vgz_A          208 LITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVV--DTRN  262 (353)
T ss_dssp             EEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEE--ETTT
T ss_pred             EEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEE--ECCC
Confidence            99999999999887764    33344445555442  222  256999999  7744

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.54  E-value=1.6e-13  Score=118.34  Aligned_cols=178  Identities=13%  Similarity=0.085  Sum_probs=121.6

Q ss_pred             eeeeEEeecc-CCCeEEEEEcCCCCEEEEEeC--CCcEEEE--eCCCCeEEEEEeCCCCCeEEEEEecCCCEEE-EEECC
Q psy8430         151 CYKIRSFSGH-RDGVWDVAVRPGQPVLGSASA--DRTVRLW--STQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGD  224 (361)
Q Consensus       151 ~~~~~~l~~h-~~~V~~l~~~~~~~~l~s~s~--d~~i~~w--d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d  224 (361)
                      ++....+.+| ...|.+++|+|+|.+|++++.  ++.+.+|  +..++. ...+. +...+.+++|+|+++.++ +++.|
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~-~~~~~~~~~~spdg~~l~~~~~~~  150 (297)
T 2ojh_A           73 PSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMT-KNLPSYWHGWSPDGKSFTYCGIRD  150 (297)
T ss_dssp             CSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECC-SSSSEEEEEECTTSSEEEEEEEET
T ss_pred             CCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEee-cCCCccceEECCCCCEEEEEECCC
Confidence            3444455555 477899999999999999993  3455555  445544 34444 334589999999999877 78889


Q ss_pred             CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEeeCC-C
Q psy8430         225 KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVE-T  302 (361)
Q Consensus       225 ~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~-~  302 (361)
                      +.+.+|++....                         .....+..+...+.+++|+|+|++++.++ .++.+++|++. .
T Consensus       151 ~~~~l~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~  205 (297)
T 2ojh_A          151 QVFDIYSMDIDS-------------------------GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVD  205 (297)
T ss_dssp             TEEEEEEEETTT-------------------------CCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred             CceEEEEEECCC-------------------------CcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCC
Confidence            999999864221                         13345566778899999999999888766 58999999886 5


Q ss_pred             CeEEEEeecCCCCCeEEEEEcCCCc---ccCC-----------CeEEEEcCCCCCCCCcceeeeeeccccc
Q psy8430         303 GTILQSLTGHDEEPHILCVSSYYSK---VSCD-----------LFQRIQHLDCGTSENPIHSVCVFQDIQS  359 (361)
Q Consensus       303 ~~~~~~~~~h~~~v~~~~~s~s~~~---v~~d-----------g~i~iW~~d~~~~~~~~~~v~~~~~h~~  359 (361)
                      +..+..+..|...+..+.+++++..   .+.+           +.|.+|  |+.++.  ...+..+.+|..
T Consensus       206 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~--d~~~~~--~~~~~~~~~~~~  272 (297)
T 2ojh_A          206 GSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLM--DMDGGN--VETLFDLFGGQG  272 (297)
T ss_dssp             SSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEE--ETTSCS--CEEEEEEEESTT
T ss_pred             CCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEE--ecCCCC--ceeeeccCCCCc
Confidence            5666777777766666556555321   1233           569999  663322  234455556654

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.54  E-value=1.5e-12  Score=114.62  Aligned_cols=168  Identities=11%  Similarity=0.077  Sum_probs=118.3

Q ss_pred             ceee-eEEeeccCCCeEEEEEcCCCCEEEEEeCCC---cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEE-EEECC
Q psy8430         150 SCYK-IRSFSGHRDGVWDVAVRPGQPVLGSASADR---TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGD  224 (361)
Q Consensus       150 ~~~~-~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~---~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d  224 (361)
                      +++. ...+..+..+..+++|+|+|++++++..++   .|.+||+.+++.+..+. +...+.+++|+|+++.++ +...+
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~  149 (331)
T 3u4y_A           71 LEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP-IPYDAVGIAISPNGNGLILIDRSS  149 (331)
T ss_dssp             SSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE-CCTTEEEEEECTTSSCEEEEEETT
T ss_pred             CCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE-CCCCccceEECCCCCEEEEEecCC
Confidence            3444 667777777776699999999998555553   89999999999888877 455679999999998554 45566


Q ss_pred             Cc-EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEeeCCC
Q psy8430         225 KS-VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVET  302 (361)
Q Consensus       225 ~~-i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~  302 (361)
                      +. +.+|++......                    .. .. ............++|+|+|++++.++ .++.|.+||+.+
T Consensus       150 ~~~i~~~~~~~~g~~--------------------~~-~~-~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~  207 (331)
T 3u4y_A          150 ANTVRRFKIDADGVL--------------------FD-TG-QEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQN  207 (331)
T ss_dssp             TTEEEEEEECTTCCE--------------------EE-EE-EEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             CceEEEEEECCCCcE--------------------ee-cC-CccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence            88 999998643111                    00 01 22224455688999999999765554 688999999999


Q ss_pred             CeE---EEEeecCCCCCeEEEEEcCCC--cc--cCCCeEEEEcCCCCC
Q psy8430         303 GTI---LQSLTGHDEEPHILCVSSYYS--KV--SCDLFQRIQHLDCGT  343 (361)
Q Consensus       303 ~~~---~~~~~~h~~~v~~~~~s~s~~--~v--~~dg~i~iW~~d~~~  343 (361)
                      ++.   +..+..+ ..+..+.+++++.  ++  ..++.|.+|  |..+
T Consensus       208 ~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~--d~~~  252 (331)
T 3u4y_A          208 PENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNF--NQLS  252 (331)
T ss_dssp             TTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEE--ETTT
T ss_pred             CcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEE--ECCC
Confidence            988   7777754 3344445554422  22  257889999  7643

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.52  E-value=3.5e-12  Score=112.55  Aligned_cols=175  Identities=6%  Similarity=-0.011  Sum_probs=115.3

Q ss_pred             eeEEeeecC--ccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCC---CCeEEEEEeCCCCCeEEEEEe
Q psy8430         139 KIVSSFKTS--LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQ---TGKCVLQYSGHSGSVNSVRFL  212 (361)
Q Consensus       139 ~~~~~~~~~--~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~-d~~i~~wd~~---~~~~~~~~~~h~~~v~~v~~~  212 (361)
                      ..+..|..+  ......+..+..+. .+.+++|+|+|++|++++. ++.|.+||+.   .++.+..+. ....+.+++|+
T Consensus        60 ~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s  137 (343)
T 1ri6_A           60 FRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANIS  137 (343)
T ss_dssp             TEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEEC
T ss_pred             CeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEEC
Confidence            455555555  34445566666554 7899999999998776665 8899999994   334455555 34568999999


Q ss_pred             cCCCEEEEEE-CCCcEEEEeccc-cccccCCCCCCCCCCCCCCCCCceecccccE--EEeC-CCCcEEEEEEcCCCCEEE
Q psy8430         213 PNKDLVLSAS-GDKSVHIWQAVI-NWECLNNDNDSDLDESKEPDESSITLRTPVK--ELLG-HSNVVIAADWLSDGEQVI  287 (361)
Q Consensus       213 ~~~~~l~s~~-~d~~i~lwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~v~~~~~~~~~~~l~  287 (361)
                      |+++.+++++ .++.|.+||+.+ +..                        ....  .... ....+..++|+|+|++++
T Consensus       138 ~dg~~l~~~~~~~~~v~~~d~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~pdg~~l~  193 (343)
T 1ri6_A          138 PDNRTLWVPALKQDRICLFTVSDDGHL------------------------VAQDPAEVTTVEGAGPRHMVFHPNEQYAY  193 (343)
T ss_dssp             TTSSEEEEEEGGGTEEEEEEECTTSCE------------------------EEEEEEEEECSTTCCEEEEEECTTSSEEE
T ss_pred             CCCCEEEEecCCCCEEEEEEecCCCce------------------------eeecccccccCCCCCcceEEECCCCCEEE
Confidence            9999888877 899999999875 310                        0111  2222 345788899999999876


Q ss_pred             EEe-CCCcEEEeeCC--CCeE--EEEeec----CC--CCCeEEEEEcCC--Ccc--cCCCeEEEEcCCC
Q psy8430         288 TAS-WDRVANLFDVE--TGTI--LQSLTG----HD--EEPHILCVSSYY--SKV--SCDLFQRIQHLDC  341 (361)
Q Consensus       288 s~~-~d~~v~iwd~~--~~~~--~~~~~~----h~--~~v~~~~~s~s~--~~v--~~dg~i~iW~~d~  341 (361)
                      +++ .++.|.+||+.  +++.  ...+..    +.  ..+..+.+++++  +++  ..|+.|++|  |+
T Consensus       194 ~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~--d~  260 (343)
T 1ri6_A          194 CVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVF--SV  260 (343)
T ss_dssp             EEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEE--EE
T ss_pred             EEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEE--EE
Confidence            655 78999999995  3432  223321    11  122234444331  121  278999999  55

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.51  E-value=2.9e-13  Score=132.63  Aligned_cols=127  Identities=13%  Similarity=0.154  Sum_probs=102.1

Q ss_pred             CCCeEEEEEcCCCCEEEEEeC-CC-----cEEEEeCCCCeEEEEEeCCCC------------------------CeEEEE
Q psy8430         161 RDGVWDVAVRPGQPVLGSASA-DR-----TVRLWSTQTGKCVLQYSGHSG------------------------SVNSVR  210 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~-d~-----~i~~wd~~~~~~~~~~~~h~~------------------------~v~~v~  210 (361)
                      ...|.+++|+|||++|++++. |+     +|++||+.+++....+..+..                        .|.+++
T Consensus        36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  115 (741)
T 2ecf_A           36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ  115 (741)
T ss_dssp             CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred             CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence            457999999999999999998 88     999999999987777765433                        388999


Q ss_pred             EecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe
Q psy8430         211 FLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS  290 (361)
Q Consensus       211 ~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~  290 (361)
                      |+|+|+.|++++. +.|.+||+.++..                        .....+..|...+..++|+|+|++|+.++
T Consensus       116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~------------------------~~~~~l~~~~~~~~~~~~SPDG~~la~~~  170 (741)
T 2ecf_A          116 WSPDAQRLLFPLG-GELYLYDLKQEGK------------------------AAVRQLTHGEGFATDAKLSPKGGFVSFIR  170 (741)
T ss_dssp             ECTTSSEEEEEET-TEEEEEESSSCST------------------------TSCCBCCCSSSCEEEEEECTTSSEEEEEE
T ss_pred             ECCCCCEEEEEeC-CcEEEEECCCCCc------------------------ceEEEcccCCcccccccCCCCCCEEEEEe
Confidence            9999999999886 9999999875410                        01223455677899999999999999987


Q ss_pred             CCCcEEEeeCCCCeEEEEeecCC
Q psy8430         291 WDRVANLFDVETGTILQSLTGHD  313 (361)
Q Consensus       291 ~d~~v~iwd~~~~~~~~~~~~h~  313 (361)
                       ++.|++||+.+++.......+.
T Consensus       171 -~~~i~~~d~~~g~~~~~~~~~~  192 (741)
T 2ecf_A          171 -GRNLWVIDLASGRQMQLTADGS  192 (741)
T ss_dssp             -TTEEEEEETTTTEEEECCCCCC
T ss_pred             -CCcEEEEecCCCCEEEeccCCc
Confidence             4689999999988766554443

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.51  E-value=1.2e-13  Score=134.86  Aligned_cols=168  Identities=9%  Similarity=0.003  Sum_probs=118.7

Q ss_pred             cCccceeeeEEeeccCC---CeEEEEEcCCCCEEEEEeCC---------CcEEEEeCCCCeEEEEEe---CCCCCeEEEE
Q psy8430         146 TSLLSCYKIRSFSGHRD---GVWDVAVRPGQPVLGSASAD---------RTVRLWSTQTGKCVLQYS---GHSGSVNSVR  210 (361)
Q Consensus       146 ~~~~~~~~~~~l~~h~~---~V~~l~~~~~~~~l~s~s~d---------~~i~~wd~~~~~~~~~~~---~h~~~v~~v~  210 (361)
                      ++..+++....+.+|..   .|.+++|+|||++|++++.+         +.+.+||+.+++. ..+.   +|...+..++
T Consensus        42 ~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~  120 (723)
T 1xfd_A           42 WNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAG  120 (723)
T ss_dssp             BCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCC
T ss_pred             EECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccE
Confidence            34445555666677765   49999999999999999875         7788999998875 3333   3445589999


Q ss_pred             EecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCC------------------
Q psy8430         211 FLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSN------------------  272 (361)
Q Consensus       211 ~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------  272 (361)
                      |+|+|+.|+.++. +.|.+||+.++..                          ......+..                  
T Consensus       121 ~SPdG~~la~~~~-~~i~~~~~~~g~~--------------------------~~~~~~~~~~~~~~g~~~~v~~ee~~~  173 (723)
T 1xfd_A          121 WGPKGQQLIFIFE-NNIYYCAHVGKQA--------------------------IRVVSTGKEGVIYNGLSDWLYEEEILK  173 (723)
T ss_dssp             BCSSTTCEEEEET-TEEEEESSSSSCC--------------------------EEEECCCBTTTEEEEECCHHHHHTTSS
T ss_pred             ECCCCCEEEEEEC-CeEEEEECCCCce--------------------------EEEecCCCCCceECcccceeEEEEecc
Confidence            9999999999886 7899999876532                          111112111                  


Q ss_pred             cEEEEEEcCCCCEEEEEeCCC----------------------------------cEEEeeCCCCeEEEEeecC------
Q psy8430         273 VVIAADWLSDGEQVITASWDR----------------------------------VANLFDVETGTILQSLTGH------  312 (361)
Q Consensus       273 ~v~~~~~~~~~~~l~s~~~d~----------------------------------~v~iwd~~~~~~~~~~~~h------  312 (361)
                      .+.+++|+|||++|++++.|+                                  .|++||+.++++...+..+      
T Consensus       174 ~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~  253 (723)
T 1xfd_A          174 THIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMR  253 (723)
T ss_dssp             SSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGS
T ss_pred             CcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCc
Confidence            337899999999999987653                                  7999999998876666654      


Q ss_pred             CCCCeEEEEEcCCCcc-------cCCCeEEEEcCCCCC
Q psy8430         313 DEEPHILCVSSYYSKV-------SCDLFQRIQHLDCGT  343 (361)
Q Consensus       313 ~~~v~~~~~s~s~~~v-------~~dg~i~iW~~d~~~  343 (361)
                      ...+..+.+++++..+       ..+..|++|  |+.+
T Consensus       254 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~--d~~~  289 (723)
T 1xfd_A          254 EYYITMVKWATSTKVAVTWLNRAQNVSILTLC--DATT  289 (723)
T ss_dssp             SEEEEEEEESSSSEEEEEEEETTSCEEEEEEE--ETTT
T ss_pred             cceeEEEEEeCCCeEEEEEEcCCCCeEEEEEE--eCCC
Confidence            3445555555552211       134689999  7644

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.51  E-value=2.8e-13  Score=132.80  Aligned_cols=156  Identities=10%  Similarity=0.048  Sum_probs=116.3

Q ss_pred             eeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCC----------------eEEEEEecCCC
Q psy8430         153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS----------------VNSVRFLPNKD  216 (361)
Q Consensus       153 ~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~----------------v~~v~~~~~~~  216 (361)
                      ....+..|.+.+.+++|+|||++|+.++. +.|++||+.+++.......+...                +.+++|+|+|+
T Consensus       143 ~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~  221 (741)
T 2ecf_A          143 AVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDS  221 (741)
T ss_dssp             SCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSS
T ss_pred             eEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCC
Confidence            34567788899999999999999999874 69999999988776554444332                47899999999


Q ss_pred             EEEEEECCC---------------------------------cEEEEeccc-cccccCCCCCCCCCCCCCCCCCceeccc
Q psy8430         217 LVLSASGDK---------------------------------SVHIWQAVI-NWECLNNDNDSDLDESKEPDESSITLRT  262 (361)
Q Consensus       217 ~l~s~~~d~---------------------------------~i~lwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (361)
                      .|++++.|+                                 .|.+||+.+ +..                         
T Consensus       222 ~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~-------------------------  276 (741)
T 2ecf_A          222 AIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQT-------------------------  276 (741)
T ss_dssp             CEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCC-------------------------
T ss_pred             EEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCce-------------------------
Confidence            999988765                                 677788765 421                         


Q ss_pred             ccEEE--eCCCCcEEEEEEcCCCCEEEEEeC-----CCcEEEeeCCCCeEEEEeecCCC----CCeE--------EEEEc
Q psy8430         263 PVKEL--LGHSNVVIAADWLSDGEQVITASW-----DRVANLFDVETGTILQSLTGHDE----EPHI--------LCVSS  323 (361)
Q Consensus       263 ~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~-----d~~v~iwd~~~~~~~~~~~~h~~----~v~~--------~~~s~  323 (361)
                       ....  ..|...+..++| |+|++|++++.     +..|++||+.++++...+..+..    .+..        +++++
T Consensus       277 -~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~  354 (741)
T 2ecf_A          277 -QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSS  354 (741)
T ss_dssp             -EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEE
T ss_pred             -EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEe
Confidence             1111  147778999999 99999997764     56799999999988877765542    1222        55556


Q ss_pred             CCCcccCCCeEEEEcCCC
Q psy8430         324 YYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       324 s~~~v~~dg~i~iW~~d~  341 (361)
                      +     .||.++||.+|.
T Consensus       355 ~-----~~g~~~l~~~~~  367 (741)
T 2ecf_A          355 E-----RTGFQHLYRIDS  367 (741)
T ss_dssp             C-----TTSSCEEEEECS
T ss_pred             c-----CCCccEEEEEcC
Confidence            6     899888885564

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.48  E-value=3.8e-13  Score=131.09  Aligned_cols=156  Identities=12%  Similarity=0.127  Sum_probs=111.7

Q ss_pred             EEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC-----CeEEEEEeCCCCC--------------eEEEEEecCC
Q psy8430         155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-----GKCVLQYSGHSGS--------------VNSVRFLPNK  215 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~-----~~~~~~~~~h~~~--------------v~~v~~~~~~  215 (361)
                      ..+..+.+.+.+++|+|||+.|+++ .|+.|++||+.+     ++.......+...              +.+++|+|+|
T Consensus       114 ~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg  192 (706)
T 2z3z_A          114 TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG  192 (706)
T ss_dssp             EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS
T ss_pred             EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCC
Confidence            3455677889999999999999985 679999999998     7766544444333              4899999999


Q ss_pred             CEEEEEE---------------------------------CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceeccc
Q psy8430         216 DLVLSAS---------------------------------GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRT  262 (361)
Q Consensus       216 ~~l~s~~---------------------------------~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (361)
                      +.|++++                                 .+..|.+||+.++...                        
T Consensus       193 ~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~------------------------  248 (706)
T 2z3z_A          193 SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTV------------------------  248 (706)
T ss_dssp             SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEE------------------------
T ss_pred             CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceE------------------------
Confidence            9999987                                 4467899998765211                        


Q ss_pred             ccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC-----cEEEeeCCCCeEEEEee-c-CCC---CCeE----------EEEE
Q psy8430         263 PVKELLGHSNVVIAADWLSDGEQVITASWDR-----VANLFDVETGTILQSLT-G-HDE---EPHI----------LCVS  322 (361)
Q Consensus       263 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~~~~-~-h~~---~v~~----------~~~s  322 (361)
                      .+.....|...+.+++|+|+|++|++++.++     .|++||+.+++....+. . +..   .+..          ++++
T Consensus       249 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~  328 (706)
T 2z3z_A          249 YLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQ  328 (706)
T ss_dssp             ECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEE
T ss_pred             eeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEE
Confidence            1111124667899999999999999988776     89999999984433332 1 111   1122          4444


Q ss_pred             cCCCcccCCCeEEEEcCC
Q psy8430         323 SYYSKVSCDLFQRIQHLD  340 (361)
Q Consensus       323 ~s~~~v~~dg~i~iW~~d  340 (361)
                      ++     .||.++||.+|
T Consensus       329 ~~-----~~g~~~l~~~~  341 (706)
T 2z3z_A          329 SR-----RDGWNHLYLYD  341 (706)
T ss_dssp             EC-----TTSSCEEEEEE
T ss_pred             Ec-----cCCccEEEEEE
Confidence            44     78999999554

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.48  E-value=1.4e-11  Score=109.36  Aligned_cols=193  Identities=10%  Similarity=0.035  Sum_probs=123.5

Q ss_pred             eeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCC-CC--eEEEEEeCC---------CCC
Q psy8430         139 KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS-ADRTVRLWSTQ-TG--KCVLQYSGH---------SGS  205 (361)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s-~d~~i~~wd~~-~~--~~~~~~~~h---------~~~  205 (361)
                      ..+..|.......+.+..+..+...+..++|+|+|++|++++ .+++|.+|++. .+  ..+..+...         ...
T Consensus        63 ~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~  142 (347)
T 3hfq_A           63 GGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSH  142 (347)
T ss_dssp             EEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCC
T ss_pred             ceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCC
Confidence            455566665555667777777888899999999999888888 68999999995 33  333333321         234


Q ss_pred             eEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC-CCCcEEEEEEcCCCC
Q psy8430         206 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGE  284 (361)
Q Consensus       206 v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~  284 (361)
                      +.+++|+|+++++++...++.|.+|++......                       .....+.. ....+..++|+|+|+
T Consensus       143 ~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~-----------------------~~~~~~~~~~g~~p~~~~~spdg~  199 (347)
T 3hfq_A          143 IHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQL-----------------------SEQSVLTMEAGFGPRHLVFSPDGQ  199 (347)
T ss_dssp             EEEEEECTTSCEEEEETTTTEEEEEEECTTSCE-----------------------EEEEEEECCTTCCEEEEEECTTSS
T ss_pred             ceEEEECCCCcEEEEeCCCCEEEEEEECCCCcE-----------------------EEeeeEEcCCCCCCceEEECCCCC
Confidence            889999999996666667889999998622100                       01122222 233677899999999


Q ss_pred             EEEE-EeCCCcEEEeeCCC--CeE--EEEeecCCC------CCeEEEEEcCC--Ccc--cCCCeEEEEcCCCCCCCCcce
Q psy8430         285 QVIT-ASWDRVANLFDVET--GTI--LQSLTGHDE------EPHILCVSSYY--SKV--SCDLFQRIQHLDCGTSENPIH  349 (361)
Q Consensus       285 ~l~s-~~~d~~v~iwd~~~--~~~--~~~~~~h~~------~v~~~~~s~s~--~~v--~~dg~i~iW~~d~~~~~~~~~  349 (361)
                      ++++ +..++.|.+|++..  ++.  +..+.....      .+..+.+++++  +++  ..++.|.+|  |+.. .....
T Consensus       200 ~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~--~~~~-~g~~~  276 (347)
T 3hfq_A          200 YAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVF--AVTA-DGHLT  276 (347)
T ss_dssp             EEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEE--EECG-GGCEE
T ss_pred             EEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEE--EECC-CCcEE
Confidence            7666 45678999999873  543  333333221      24445555542  222  268999999  5521 11234


Q ss_pred             eeeeeccc
Q psy8430         350 SVCVFQDI  357 (361)
Q Consensus       350 ~v~~~~~h  357 (361)
                      .+..+..|
T Consensus       277 ~~~~~~~~  284 (347)
T 3hfq_A          277 LIQQISTE  284 (347)
T ss_dssp             EEEEEECS
T ss_pred             EeEEEecC
Confidence            45555443

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.47  E-value=7.7e-12  Score=111.67  Aligned_cols=161  Identities=11%  Similarity=0.012  Sum_probs=107.8

Q ss_pred             CCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCe-------E------EEEEeCCCCCeEEEEEecCCCEEEEEE-CCCc
Q psy8430         162 DGVWDVAVRPGQPVLGSAS-ADRTVRLWSTQTGK-------C------VLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKS  226 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s-~d~~i~~wd~~~~~-------~------~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~~  226 (361)
                      ..+.+++|+|+|++++.++ .++.|.+|++....       .      ......+...+..++|+|+++++++++ .++.
T Consensus       155 ~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~  234 (361)
T 3scy_A          155 PHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGT  234 (361)
T ss_dssp             CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCE
T ss_pred             CcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCe
Confidence            3468899999999665554 58899999886433       1      111223566788999999999887777 6899


Q ss_pred             EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC--CcEEEeeCC--C
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD--RVANLFDVE--T  302 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--~~v~iwd~~--~  302 (361)
                      |.+|++.++...                     ..........+......++|+|+|++|+++..+  +.|.+|++.  +
T Consensus       235 v~v~~~~~g~~~---------------------~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~  293 (361)
T 3scy_A          235 VIAFRYADGMLD---------------------EIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETN  293 (361)
T ss_dssp             EEEEEEETTEEE---------------------EEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTT
T ss_pred             EEEEEecCCceE---------------------EeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCC
Confidence            999998754210                     000111122334557899999999999777665  889999985  4


Q ss_pred             Ce--EEEEeecCCCCCeEEEEEcCC--Cccc--CCCeEEEEcCCCCCC
Q psy8430         303 GT--ILQSLTGHDEEPHILCVSSYY--SKVS--CDLFQRIQHLDCGTS  344 (361)
Q Consensus       303 ~~--~~~~~~~h~~~v~~~~~s~s~--~~v~--~dg~i~iW~~d~~~~  344 (361)
                      ++  .+..+.. ...+..+.+++++  ++++  .++.|.+|++|..++
T Consensus       294 g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g  340 (361)
T 3scy_A          294 GTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATG  340 (361)
T ss_dssp             CCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTC
T ss_pred             CcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCC
Confidence            54  4445554 4455566666542  2332  579999986677444

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.45  E-value=1.1e-11  Score=110.12  Aligned_cols=177  Identities=11%  Similarity=0.045  Sum_probs=114.9

Q ss_pred             EEeeecCccceeeeE-EeeccCCCeEEEEEcCCCCEEEEEeC---CCcEEEEeCCCCe--EEEEEeCCCCCeEEEEEecC
Q psy8430         141 VSSFKTSLLSCYKIR-SFSGHRDGVWDVAVRPGQPVLGSASA---DRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLPN  214 (361)
Q Consensus       141 ~~~~~~~~~~~~~~~-~l~~h~~~V~~l~~~~~~~~l~s~s~---d~~i~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~  214 (361)
                      +..|..+..++++.. ....+...+..++|+|+|+ |++++.   ++.|.+|++.++.  .+..+..+...+..++|+|+
T Consensus        18 i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spd   96 (347)
T 3hfq_A           18 IYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEA   96 (347)
T ss_dssp             EEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETT
T ss_pred             EEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCC
Confidence            344444444433322 2334567788899999998 555544   6899999997775  44455557888999999999


Q ss_pred             CCEEEEEE-CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC---------CCCcEEEEEEcCCCC
Q psy8430         215 KDLVLSAS-GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG---------HSNVVIAADWLSDGE  284 (361)
Q Consensus       215 ~~~l~s~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~  284 (361)
                      +++|++++ .++.+.+|++......                       ..+..+..         +...+.+++|+|+|+
T Consensus        97 g~~l~~~~~~~~~v~v~~~~~~g~~-----------------------~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~  153 (347)
T 3hfq_A           97 RQLVYSANYHKGTAEVMKIAADGAL-----------------------TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR  153 (347)
T ss_dssp             TTEEEEEETTTTEEEEEEECTTSCE-----------------------EEEEEEECCCCCSSTTCSSCCEEEEEECTTSC
T ss_pred             CCEEEEEeCCCCEEEEEEeCCCCCe-----------------------eecceeecCCCCCCccccCCCceEEEECCCCc
Confidence            99988888 6789999998532110                       01112211         234588999999999


Q ss_pred             EEEEEeCCCcEEEeeCC-CCeEEE--EeecCCC-CCeEEEEEcCC--Ccc--cCCCeEEEEcCCC
Q psy8430         285 QVITASWDRVANLFDVE-TGTILQ--SLTGHDE-EPHILCVSSYY--SKV--SCDLFQRIQHLDC  341 (361)
Q Consensus       285 ~l~s~~~d~~v~iwd~~-~~~~~~--~~~~h~~-~v~~~~~s~s~--~~v--~~dg~i~iW~~d~  341 (361)
                      ++++...++.|.+||+. +++...  .+..+.+ .+..+.+++++  +++  ..++.|++|+++.
T Consensus       154 l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~  218 (347)
T 3hfq_A          154 LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT  218 (347)
T ss_dssp             EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred             EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence            66666678899999998 554332  2233222 33444555442  222  2689999995443

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.44  E-value=6.6e-12  Score=110.43  Aligned_cols=134  Identities=13%  Similarity=0.136  Sum_probs=99.0

Q ss_pred             ceeeeEEeec-cCC-CeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCeEEEEEeCC-----CCCeEEEEEecCCCEEEEE
Q psy8430         150 SCYKIRSFSG-HRD-GVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGH-----SGSVNSVRFLPNKDLVLSA  221 (361)
Q Consensus       150 ~~~~~~~l~~-h~~-~V~~l~~~~~~~~l-~s~s~d~~i~~wd~~~~~~~~~~~~h-----~~~v~~v~~~~~~~~l~s~  221 (361)
                      +++.+..+.. +.. .+.+++|+|+|+.+ ++++.++.|.+||+.+++.+..+...     ...+.+++|+|+++.++++
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~   99 (337)
T 1pby_B           20 KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIY   99 (337)
T ss_dssp             TTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEE
T ss_pred             CCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEE
Confidence            3455555553 222 47899999999765 55666889999999999888777632     1267889999999998888


Q ss_pred             E------------CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy8430         222 S------------GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA  289 (361)
Q Consensus       222 ~------------~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~  289 (361)
                      +            .++.|.+||+.++.                          ....+.. ...+..++|+|+|++++++
T Consensus       100 ~~~~~~~~~~~~~~~~~i~v~d~~~~~--------------------------~~~~~~~-~~~~~~~~~s~dg~~l~~~  152 (337)
T 1pby_B          100 ESPVRLELTHFEVQPTRVALYDAETLS--------------------------RRKAFEA-PRQITMLAWARDGSKLYGL  152 (337)
T ss_dssp             EEEEEECSSCEEECCCEEEEEETTTTE--------------------------EEEEEEC-CSSCCCEEECTTSSCEEEE
T ss_pred             ecccccccccccccCceEEEEECCCCc--------------------------EEEEEeC-CCCcceeEECCCCCEEEEe
Confidence            6            67999999987552                          2233332 3456778899999988888


Q ss_pred             eCCCcEEEeeCCCCeEEEEeecC
Q psy8430         290 SWDRVANLFDVETGTILQSLTGH  312 (361)
Q Consensus       290 ~~d~~v~iwd~~~~~~~~~~~~h  312 (361)
                        ++.|++||+.+++.+..+..+
T Consensus       153 --~~~i~~~d~~~~~~~~~~~~~  173 (337)
T 1pby_B          153 --GRDLHVMDPEAGTLVEDKPIQ  173 (337)
T ss_dssp             --SSSEEEEETTTTEEEEEECST
T ss_pred             --CCeEEEEECCCCcEeeeeecc
Confidence              688999999998887766543

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.42  E-value=2.6e-13  Score=132.52  Aligned_cols=128  Identities=12%  Similarity=0.043  Sum_probs=100.4

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCC---CeEEEEEecCCCEEEEEECC---------CcEEE
Q psy8430         162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG---SVNSVRFLPNKDLVLSASGD---------KSVHI  229 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~---~v~~v~~~~~~~~l~s~~~d---------~~i~l  229 (361)
                      ..+.+++|+|||+++++ +.||+|++||+.+++....+.+|..   .|.+++|+|+|++|++++.+         +.+.+
T Consensus        17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~   95 (723)
T 1xfd_A           17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL   95 (723)
T ss_dssp             CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred             ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEE
Confidence            34678899999997766 7899999999999988888877665   49999999999999998875         77889


Q ss_pred             EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEe
Q psy8430         230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL  309 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~  309 (361)
                      ||+.++...                        .+....+|...+..++|||+|++|+.++. +.|++||+.+++.....
T Consensus        96 ~d~~~~~~~------------------------~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~  150 (723)
T 1xfd_A           96 SKIPHGDPQ------------------------SLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVV  150 (723)
T ss_dssp             EESSSCCCE------------------------ECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEE
T ss_pred             EECCCCceE------------------------eccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEe
Confidence            999766210                        11112234555888999999999999986 79999999998877666


Q ss_pred             ecCCCC
Q psy8430         310 TGHDEE  315 (361)
Q Consensus       310 ~~h~~~  315 (361)
                      ..+...
T Consensus       151 ~~~~~~  156 (723)
T 1xfd_A          151 STGKEG  156 (723)
T ss_dssp             CCCBTT
T ss_pred             cCCCCC
Confidence            554443

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.42  E-value=1.7e-12  Score=132.08  Aligned_cols=150  Identities=9%  Similarity=-0.071  Sum_probs=122.2

Q ss_pred             cCCCeEEEEEc-CCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCC-CeEEEEEecCCCEEEEEECCCcEE-EEeccccc
Q psy8430         160 HRDGVWDVAVR-PGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG-SVNSVRFLPNKDLVLSASGDKSVH-IWQAVINW  236 (361)
Q Consensus       160 h~~~V~~l~~~-~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~-~v~~v~~~~~~~~l~s~~~d~~i~-lwd~~~~~  236 (361)
                      |.+.|.+++|+ |+|..|++++ ++.|.+|++..+... .+..|.. .+.+++|+ +|+.++.++.++.+. +||+..+ 
T Consensus       294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~-  369 (1045)
T 1k32_A          294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTG-  369 (1045)
T ss_dssp             ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTC-
T ss_pred             cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCC-
Confidence            45579999999 9999999888 789999999877654 4566777 89999999 999999999888888 8887654 


Q ss_pred             cccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCC
Q psy8430         237 ECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEP  316 (361)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v  316 (361)
                                                ....+.+|...+..++|+|+|++|++++.++.|++||+.+++....+.+|...+
T Consensus       370 --------------------------~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v  423 (1045)
T 1k32_A          370 --------------------------KAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMI  423 (1045)
T ss_dssp             --------------------------CEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCC
T ss_pred             --------------------------CceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCc
Confidence                                      223344677889999999999999999999999999999999888887888888


Q ss_pred             eEEEEEcCCCc---ccCC----------CeEEEEcCCC
Q psy8430         317 HILCVSSYYSK---VSCD----------LFQRIQHLDC  341 (361)
Q Consensus       317 ~~~~~s~s~~~---v~~d----------g~i~iW~~d~  341 (361)
                      ..+.+++++..   .+.+          +.|++|  |+
T Consensus       424 ~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~--d~  459 (1045)
T 1k32_A          424 TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVY--DM  459 (1045)
T ss_dssp             CCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEE--ET
T ss_pred             cceEECCCCCeEEEEecCccccccCCCCCeEEEE--EC
Confidence            77666665332   1232          599999  66

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.41  E-value=2e-11  Score=108.01  Aligned_cols=184  Identities=9%  Similarity=0.028  Sum_probs=114.7

Q ss_pred             ceeeeEEeecc------CCCeEEEEEcCCCCEEEEEeCC------------CcEEEEeCCCC---eEEEEEeCCCCCeEE
Q psy8430         150 SCYKIRSFSGH------RDGVWDVAVRPGQPVLGSASAD------------RTVRLWSTQTG---KCVLQYSGHSGSVNS  208 (361)
Q Consensus       150 ~~~~~~~l~~h------~~~V~~l~~~~~~~~l~s~s~d------------~~i~~wd~~~~---~~~~~~~~h~~~v~~  208 (361)
                      +++.+..+..+      ...+.+++|+|+|++|++++.+            +.|.+||+.++   +.+..+. +...+.+
T Consensus        74 t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~  152 (349)
T 1jmx_B           74 TCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYL  152 (349)
T ss_dssp             TTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCC
T ss_pred             CCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccc
Confidence            34555555432      2337899999999999998865            89999999874   3334444 4456889


Q ss_pred             EEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCC-CC---------CCCCCCCCc-eec-----------------
Q psy8430         209 VRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSD-LD---------ESKEPDESS-ITL-----------------  260 (361)
Q Consensus       209 v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~-~~---------~~~~~~~~~-~~~-----------------  260 (361)
                      ++|+|+++ ++.++  +.|.+||+.++........... ..         .+....... ...                 
T Consensus       153 ~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  229 (349)
T 1jmx_B          153 MRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATA  229 (349)
T ss_dssp             EEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCC
T ss_pred             eeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccc
Confidence            99999999 55543  3499999987755432111100 00         000000000 000                 


Q ss_pred             --------------ccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCC
Q psy8430         261 --------------RTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYY  325 (361)
Q Consensus       261 --------------~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~  325 (361)
                                    .-....+..+...+.+++|+| +|++++++  ++.|.+||+.+++.+..+.... .+..+.+++..
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg  306 (349)
T 1jmx_B          230 DLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDH-TYYCVAFDKKG  306 (349)
T ss_dssp             EEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSS-CCCEEEECSSS
T ss_pred             ccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCC-CccceEECCCC
Confidence                          000011112344678899999 99999988  8899999999999888876433 34455555442


Q ss_pred             --Ccc-cCCCeEEEEcCCCC
Q psy8430         326 --SKV-SCDLFQRIQHLDCG  342 (361)
Q Consensus       326 --~~v-~~dg~i~iW~~d~~  342 (361)
                        +++ +.++.|++|  |..
T Consensus       307 ~~l~~~~~~~~v~v~--d~~  324 (349)
T 1jmx_B          307 DKLYLGGTFNDLAVF--NPD  324 (349)
T ss_dssp             SCEEEESBSSEEEEE--ETT
T ss_pred             CEEEEecCCCeEEEE--ecc
Confidence              222 378999999  773

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.40  E-value=2e-11  Score=107.91  Aligned_cols=145  Identities=16%  Similarity=0.069  Sum_probs=103.1

Q ss_pred             eeEEeeecCccceeeeEEeeccC-CCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCeEEEEEeCCC------CCeEEEE
Q psy8430         139 KIVSSFKTSLLSCYKIRSFSGHR-DGVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGHS------GSVNSVR  210 (361)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~l~~h~-~~V~~l~~~~~~~~l-~s~s~d~~i~~wd~~~~~~~~~~~~h~------~~v~~v~  210 (361)
                      ..+..|..  .+++.+..+..+. ..+..++|+|+|+.+ ++++.++.|.+||+.+++.+..+....      ..+.+++
T Consensus        21 ~~v~~~d~--~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~   98 (349)
T 1jmx_B           21 NNLHVVDV--ASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFA   98 (349)
T ss_dssp             TEEEEEET--TTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEE
T ss_pred             CeEEEEEC--CCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceE
Confidence            33444443  3445566665443 257899999999855 455678999999999998887776332      3378999


Q ss_pred             EecCCCEEEEEECC------------CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEE
Q psy8430         211 FLPNKDLVLSASGD------------KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAAD  278 (361)
Q Consensus       211 ~~~~~~~l~s~~~d------------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  278 (361)
                      |+|+++++++++.+            +.|.+||+.++...                       ........ ...+.+++
T Consensus        99 ~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-----------------------~~~~~~~~-~~~~~~~~  154 (349)
T 1jmx_B           99 ISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA-----------------------KPVRTFPM-PRQVYLMR  154 (349)
T ss_dssp             ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB-----------------------CCSEEEEC-CSSCCCEE
T ss_pred             ECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccc-----------------------ceeeeccC-CCccccee
Confidence            99999999988865            89999999765221                       12233333 33578899


Q ss_pred             EcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecC
Q psy8430         279 WLSDGEQVITASWDRVANLFDVETGTILQSLTGH  312 (361)
Q Consensus       279 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h  312 (361)
                      |+|+|+ +++++.  .|.+||+.+++.+..+..+
T Consensus       155 ~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~  185 (349)
T 1jmx_B          155 AADDGS-LYVAGP--DIYKMDVKTGKYTVALPLR  185 (349)
T ss_dssp             ECTTSC-EEEESS--SEEEECTTTCCEEEEECST
T ss_pred             ECCCCc-EEEccC--cEEEEeCCCCceecccccc
Confidence            999999 666544  4999999999888777543

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.40  E-value=3.7e-12  Score=129.52  Aligned_cols=154  Identities=8%  Similarity=0.019  Sum_probs=123.1

Q ss_pred             EEeeccCC-CeEEEEEcCCCCEEEEEeCCCcEE-EEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430         155 RSFSGHRD-GVWDVAVRPGQPVLGSASADRTVR-LWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       155 ~~l~~h~~-~V~~l~~~~~~~~l~s~s~d~~i~-~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~  232 (361)
                      ..+..|.+ .+.+++|+ +|..|+.++.++.+. +|++.+++.. .+.+|...+.+++|+|+|+.|++++.++.|++||+
T Consensus       330 ~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~  407 (1045)
T 1k32_A          330 LKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDL  407 (1045)
T ss_dssp             EECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             EEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEEC
Confidence            34667877 89999999 999999999988898 9999877654 34478889999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC----------cEEEeeCCC
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR----------VANLFDVET  302 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~----------~v~iwd~~~  302 (361)
                      .++.                          ......+|...+.+++|+|+|++|++++.++          .|++||+.+
T Consensus       408 ~tg~--------------------------~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~  461 (1045)
T 1k32_A          408 ETGK--------------------------PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG  461 (1045)
T ss_dssp             TTCC--------------------------EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred             CCCc--------------------------eEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence            7652                          3334447888999999999999999887654          899999998


Q ss_pred             CeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEE
Q psy8430         303 GTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQ  337 (361)
Q Consensus       303 ~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW  337 (361)
                      ++ +..+..|...+..+.+++++.   +.+.++..++|
T Consensus       462 g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~  498 (1045)
T 1k32_A          462 RK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSP  498 (1045)
T ss_dssp             TE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEE
T ss_pred             Cc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCc
Confidence            87 667777777666665665522   22356666777

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.39  E-value=1.9e-12  Score=123.35  Aligned_cols=139  Identities=12%  Similarity=-0.067  Sum_probs=106.8

Q ss_pred             eEEEEEcCCCC--EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECC----CcEEEEecccccc
Q psy8430         164 VWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD----KSVHIWQAVINWE  237 (361)
Q Consensus       164 V~~l~~~~~~~--~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d----~~i~lwd~~~~~~  237 (361)
                      +...+|+|+|+  .+++++.| .+.+||+.+++.......+.   .+++|+|+|+.+++++.|    +.|.+||+.++  
T Consensus       112 ~~~~~~s~dg~~~~~~s~~~~-~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g--  185 (582)
T 3o4h_A          112 MRILSGVDTGEAVVFTGATED-RVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSG--  185 (582)
T ss_dssp             BEEEEEEECSSCEEEEEECSS-CEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTC--
T ss_pred             ceeeeeCCCCCeEEEEecCCC-CceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCC--
Confidence            44567888775  44444444 55599999887665554333   889999999999988877    78999998765  


Q ss_pred             ccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC--cEEEeeCCCCeEEEEeecCCCC
Q psy8430         238 CLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR--VANLFDVETGTILQSLTGHDEE  315 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~--~v~iwd~~~~~~~~~~~~h~~~  315 (361)
                                               ....+..|...+..++|+|||++|+++..++  .|++||+.+++.. .+.+|...
T Consensus       186 -------------------------~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~  239 (582)
T 3o4h_A          186 -------------------------GLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKD  239 (582)
T ss_dssp             -------------------------CCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSH
T ss_pred             -------------------------CceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcC
Confidence                                     3456778888999999999999999888888  8999999999887 66666554


Q ss_pred             CeE----------------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         316 PHI----------------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       316 v~~----------------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      +..                ++++++     .||.++||  ++
T Consensus       240 ~~~~~~~~~~~~~~spdg~~~~~~~-----~~g~~~l~--~~  274 (582)
T 3o4h_A          240 FSSYRPTAITWLGYLPDGRLAVVAR-----REGRSAVF--ID  274 (582)
T ss_dssp             HHHHCCSEEEEEEECTTSCEEEEEE-----ETTEEEEE--ET
T ss_pred             hhhhhhccccceeEcCCCcEEEEEE-----cCCcEEEE--EE
Confidence            432                445555     89999999  55

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.37  E-value=6.1e-13  Score=129.93  Aligned_cols=156  Identities=12%  Similarity=0.046  Sum_probs=104.9

Q ss_pred             ceeeeEEeeccCC---CeEEEEEcCCCCEEEEEeC---------CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCE
Q psy8430         150 SCYKIRSFSGHRD---GVWDVAVRPGQPVLGSASA---------DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL  217 (361)
Q Consensus       150 ~~~~~~~l~~h~~---~V~~l~~~~~~~~l~s~s~---------d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~  217 (361)
                      +++....+.+|..   .|.+++|+|||++|++++.         |++|++||+.+++.+.... ....+.+++|+|+|+.
T Consensus        45 ~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~-l~~~~~~~~~SPDG~~  123 (719)
T 1z68_A           45 TGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE-LPRPIQYLCWSPVGSK  123 (719)
T ss_dssp             SCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC-CCSSBCCEEECSSTTC
T ss_pred             CCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccccee-cCcccccceECCCCCE
Confidence            3444455555544   4899999999999998876         7899999999887621111 2356889999999999


Q ss_pred             EEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcE---------EEEEEcCCCCEEEE
Q psy8430         218 VLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVV---------IAADWLSDGEQVIT  288 (361)
Q Consensus       218 l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---------~~~~~~~~~~~l~s  288 (361)
                      |+.+. |+.|++|++.++.......                 .......+.++...|         .+++|+|||++|++
T Consensus       124 la~~~-~~~i~~~~~~~g~~~~l~~-----------------~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~  185 (719)
T 1z68_A          124 LAYVY-QNNIYLKQRPGDPPFQITF-----------------NGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAY  185 (719)
T ss_dssp             EEEEE-TTEEEEESSTTSCCEECCC-----------------CCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEE
T ss_pred             EEEEE-CCeEEEEeCCCCCcEEEec-----------------CCCcCCeEcccccceeeeecccCcccEEECCCCCEEEE
Confidence            99886 7899999997664321100                 000111223333322         58999999999999


Q ss_pred             EeCCC----------------------------------cEEEeeCCCCeEE--------EEeecCCCCCeEEEEEcC
Q psy8430         289 ASWDR----------------------------------VANLFDVETGTIL--------QSLTGHDEEPHILCVSSY  324 (361)
Q Consensus       289 ~~~d~----------------------------------~v~iwd~~~~~~~--------~~~~~h~~~v~~~~~s~s  324 (361)
                      ++.|.                                  .|++||+.+++..        ..+.+|...+..+.++++
T Consensus       186 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD  263 (719)
T 1z68_A          186 AEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTD  263 (719)
T ss_dssp             EEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSS
T ss_pred             EEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCC
Confidence            88652                                  7889999988753        112345555666555554

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.34  E-value=1.7e-11  Score=119.50  Aligned_cols=137  Identities=14%  Similarity=0.155  Sum_probs=102.3

Q ss_pred             eEEEEEcCCCCEEEEEe---------------------------------CCCcEEEEeCCCCeEEEEEe--CCCCCeEE
Q psy8430         164 VWDVAVRPGQPVLGSAS---------------------------------ADRTVRLWSTQTGKCVLQYS--GHSGSVNS  208 (361)
Q Consensus       164 V~~l~~~~~~~~l~s~s---------------------------------~d~~i~~wd~~~~~~~~~~~--~h~~~v~~  208 (361)
                      +.++.|+|||++|++++                                 .+..|.+||+.+++......  .|...+.+
T Consensus       183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~  262 (706)
T 2z3z_A          183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTN  262 (706)
T ss_dssp             CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEE
T ss_pred             CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEee
Confidence            48899999999999998                                 45689999999887654442  46778999


Q ss_pred             EEEecCCCEEEEEECCC-----cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCC---CcEEEEEEc
Q psy8430         209 VRFLPNKDLVLSASGDK-----SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHS---NVVIAADWL  280 (361)
Q Consensus       209 v~~~~~~~~l~s~~~d~-----~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~  280 (361)
                      ++|+|+|+.|++++.|+     .|.+||+.++...                       ..+.. ..+.   ..+..++|+
T Consensus       263 ~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~-----------------------~~~~~-~~~~~~~~~~~~~~~s  318 (706)
T 2z3z_A          263 LSWSPDENILYVAEVNRAQNECKVNAYDAETGRFV-----------------------RTLFV-ETDKHYVEPLHPLTFL  318 (706)
T ss_dssp             EEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEE-----------------------EEEEE-EECSSCCCCCSCCEEC
T ss_pred             EEEECCCCEEEEEEeCCCCCeeEEEEEECCCCcee-----------------------eEEEE-ccCCCeECccCCceee
Confidence            99999999999887775     8999998765211                       01111 1122   234568999


Q ss_pred             C--CCCEEEEEeCCCcEEEeeCC-CCeEEEEeecCCCCCeE-EEEEcC
Q psy8430         281 S--DGEQVITASWDRVANLFDVE-TGTILQSLTGHDEEPHI-LCVSSY  324 (361)
Q Consensus       281 ~--~~~~l~s~~~d~~v~iwd~~-~~~~~~~~~~h~~~v~~-~~~s~s  324 (361)
                      |  +|+++++++.|+.++||++. ++..+..+..|...+.. +.+++.
T Consensus       319 p~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spd  366 (706)
T 2z3z_A          319 PGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPK  366 (706)
T ss_dssp             TTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTT
T ss_pred             cCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCC
Confidence            9  99999999999999999876 67778888877766654 344443

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.34  E-value=1.1e-11  Score=117.95  Aligned_cols=113  Identities=12%  Similarity=0.084  Sum_probs=93.7

Q ss_pred             EEEEEcCCCCEEEEEeCC----CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCC--cEEEEeccccccc
Q psy8430         165 WDVAVRPGQPVLGSASAD----RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK--SVHIWQAVINWEC  238 (361)
Q Consensus       165 ~~l~~~~~~~~l~s~s~d----~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~--~i~lwd~~~~~~~  238 (361)
                      .+++|+|||++|++++.|    +.|++||+.+++.. .+..|.+.+..++|+|+|+.|+++..++  .|.+||+.++.. 
T Consensus       153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~-  230 (582)
T 3o4h_A          153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSV-  230 (582)
T ss_dssp             CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCE-
T ss_pred             ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcE-
Confidence            789999999999988887    78999999888754 6677889999999999999999888898  899999876521 


Q ss_pred             cCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEE--------EcCCCCEEEEEeCCCcEEEeeCCCCeEEE
Q psy8430         239 LNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAAD--------WLSDGEQVITASWDRVANLFDVETGTILQ  307 (361)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~l~s~~~d~~v~iwd~~~~~~~~  307 (361)
                                               . .+.+|...+..++        |+|+|..+++++.|+.+++|++  |+...
T Consensus       231 -------------------------~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~  279 (582)
T 3o4h_A          231 -------------------------E-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE  279 (582)
T ss_dssp             -------------------------E-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC
T ss_pred             -------------------------E-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec
Confidence                                     2 3445555555555        9999999999999999999999  76654

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.28  E-value=2.9e-11  Score=116.95  Aligned_cols=158  Identities=15%  Similarity=0.076  Sum_probs=112.0

Q ss_pred             eEEeec-----cCCCeEEEEEcCCCCEEEEEeCC----------CcEEEEeCCC------CeEEEEEe-CCCCCeEEEEE
Q psy8430         154 IRSFSG-----HRDGVWDVAVRPGQPVLGSASAD----------RTVRLWSTQT------GKCVLQYS-GHSGSVNSVRF  211 (361)
Q Consensus       154 ~~~l~~-----h~~~V~~l~~~~~~~~l~s~s~d----------~~i~~wd~~~------~~~~~~~~-~h~~~v~~v~~  211 (361)
                      .+.+..     |...+.+++|+|||+.|++++.|          ..|.+||+.+      +... .+. .+...+..++|
T Consensus       117 ~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~  195 (662)
T 3azo_A          117 PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRL  195 (662)
T ss_dssp             CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEE
T ss_pred             CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCCCcccCceE
Confidence            445555     67789999999999999998877          5899999987      5543 444 56678889999


Q ss_pred             ecCCCEEEEEECC--------CcEEEEecc-ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC
Q psy8430         212 LPNKDLVLSASGD--------KSVHIWQAV-INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD  282 (361)
Q Consensus       212 ~~~~~~l~s~~~d--------~~i~lwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  282 (361)
                      +|+|+.|+.++.+        ..|.+||+. ++..                       ........+|...+..+.|+|+
T Consensus       196 SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~-----------------------~~~~~l~~~~~~~~~~~~~spd  252 (662)
T 3azo_A          196 SPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRF-----------------------ADTRTLLGGPEEAIAQAEWAPD  252 (662)
T ss_dssp             CTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCE-----------------------EEEEEEEEETTBCEEEEEECTT
T ss_pred             CCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcc-----------------------cccEEeCCCCCceEcceEECCC
Confidence            9999999887755        379999986 2300                       0122233345788999999999


Q ss_pred             CCEEEEEeCCC--cEEEeeCCCCeEEEEeecCCCC--------CeE--------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         283 GEQVITASWDR--VANLFDVETGTILQSLTGHDEE--------PHI--------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       283 ~~~l~s~~~d~--~v~iwd~~~~~~~~~~~~h~~~--------v~~--------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      |+++++++.++  .|.+||+.+++.......+...        +..        ++++++     . +.++||.+|.
T Consensus       253 g~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~-----~-~~~~l~~~d~  323 (662)
T 3azo_A          253 GSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHG-----K-GAAVLGILDP  323 (662)
T ss_dssp             SCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEB-----S-SSCEEEEEET
T ss_pred             CeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEE-----c-CccEEEEEEC
Confidence            99888888888  5667777677765444333221        112        455555     7 8999995555

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.28  E-value=6.3e-10  Score=99.53  Aligned_cols=162  Identities=10%  Similarity=0.074  Sum_probs=104.7

Q ss_pred             cCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCC-CCeEE--EEEe--CCCCCeEEEEEecCCCEEEEEEC-CCcEEEEec
Q psy8430         160 HRDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQ-TGKCV--LQYS--GHSGSVNSVRFLPNKDLVLSASG-DKSVHIWQA  232 (361)
Q Consensus       160 h~~~V~~l~~~~~~~~l~s~s~-d~~i~~wd~~-~~~~~--~~~~--~h~~~v~~v~~~~~~~~l~s~~~-d~~i~lwd~  232 (361)
                      +...+.+++|+|+|++|+++.. ++.|.+|++. +++..  ..+.  .|...+..++|+|+|+++++++. ++.|.+|++
T Consensus       143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~  222 (365)
T 1jof_A          143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVI  222 (365)
T ss_dssp             TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEE
Confidence            5678999999999998887764 6799999998 67543  3343  24677999999999999887775 789999986


Q ss_pred             cc--cccccCCCCCCCCCCCCCCCCCceecccccEEE----eCCCC------cEEEEE-EcCCCCEEEEEeCCC------
Q psy8430         233 VI--NWECLNNDNDSDLDESKEPDESSITLRTPVKEL----LGHSN------VVIAAD-WLSDGEQVITASWDR------  293 (361)
Q Consensus       233 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~------~v~~~~-~~~~~~~l~s~~~d~------  293 (361)
                      ..  +....                    ....+..+    .+|..      .+..++ |+|+|++|++++.+.      
T Consensus       223 ~~~~g~~~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~  282 (365)
T 1jof_A          223 DPATHMPVY--------------------THHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQG  282 (365)
T ss_dssp             CTTTCCEEE--------------------EEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCC
T ss_pred             eCCCCcEEE--------------------ccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCC
Confidence            42  21100                    00000111    12222      588999 999999988776432      


Q ss_pred             cEEEeeCC-CCeEEE---EeecCCCCCeEEEEEc---C--CCccc--CCCeEEEEcCCC
Q psy8430         294 VANLFDVE-TGTILQ---SLTGHDEEPHILCVSS---Y--YSKVS--CDLFQRIQHLDC  341 (361)
Q Consensus       294 ~v~iwd~~-~~~~~~---~~~~h~~~v~~~~~s~---s--~~~v~--~dg~i~iW~~d~  341 (361)
                      .|.+|++. +++...   ....+...+..+.+++   +  +++++  .++.|+||++|.
T Consensus       283 ~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~  341 (365)
T 1jof_A          283 YIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD  341 (365)
T ss_dssp             EEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred             eEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEch
Confidence            89999996 676543   2333333333333333   1  22221  358999995554

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.27  E-value=4.4e-10  Score=100.19  Aligned_cols=139  Identities=14%  Similarity=0.084  Sum_probs=96.2

Q ss_pred             cCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCeE--EEEEe---CCCCCeEEEEEecCCCEEEEEECC--CcEEEEe
Q psy8430         160 HRDGVWDVAVRPGQPVLGSAS-ADRTVRLWSTQTGKC--VLQYS---GHSGSVNSVRFLPNKDLVLSASGD--KSVHIWQ  231 (361)
Q Consensus       160 h~~~V~~l~~~~~~~~l~s~s-~d~~i~~wd~~~~~~--~~~~~---~h~~~v~~v~~~~~~~~l~s~~~d--~~i~lwd  231 (361)
                      +...+..++|+|+|+++++++ .++.|.+|++.++..  +..+.   .+...+..++|+|+|++|+++..+  +.|.+|+
T Consensus       209 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~  288 (361)
T 3scy_A          209 PGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFK  288 (361)
T ss_dssp             TTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred             CCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEE
Confidence            445678999999999887777 689999999987754  33332   234567899999999988776654  8999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEe--eCCCCeEEEE
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLF--DVETGTILQS  308 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iw--d~~~~~~~~~  308 (361)
                      +.....                      ....+..+.. ...+..++|+|+|++|++++ .++.|.+|  |..+|+....
T Consensus       289 ~~~~~g----------------------~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~  345 (361)
T 3scy_A          289 VDETNG----------------------TLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDI  345 (361)
T ss_dssp             ECTTTC----------------------CEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEEC
T ss_pred             EcCCCC----------------------cEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeec
Confidence            852100                      0012333433 45678899999999998888 56889995  5567776544


Q ss_pred             ee-cCCCCCeEEEE
Q psy8430         309 LT-GHDEEPHILCV  321 (361)
Q Consensus       309 ~~-~h~~~v~~~~~  321 (361)
                      .. .+...+.|+.+
T Consensus       346 ~~~~~~~~p~~v~~  359 (361)
T 3scy_A          346 KKDIKVDKPVCLKF  359 (361)
T ss_dssp             SCCEECSSEEEEEE
T ss_pred             ceeeeCCCCeEEEE
Confidence            32 23344555444

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.26  E-value=1.8e-10  Score=103.02  Aligned_cols=161  Identities=9%  Similarity=-0.024  Sum_probs=109.0

Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC-CCeEEEEEeC-CCCCeEEEEEecCCCE--EEEEE-------------
Q psy8430         160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ-TGKCVLQYSG-HSGSVNSVRFLPNKDL--VLSAS-------------  222 (361)
Q Consensus       160 h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~-~~~~~~~~~~-h~~~v~~v~~~~~~~~--l~s~~-------------  222 (361)
                      +...+..++|+|+|++|++++.+ .|.+|++. +++....... ..+.+.+++|+|+|+.  ++++.             
T Consensus        38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~  116 (365)
T 1jof_A           38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK  116 (365)
T ss_dssp             TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred             CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence            44568899999999999999888 99999997 7776543321 1134667899999994  44543             


Q ss_pred             CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe-CCCCcEEEEEEcCCCCEEEEEeC-CCcEEEeeC
Q psy8430         223 GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITASW-DRVANLFDV  300 (361)
Q Consensus       223 ~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd~  300 (361)
                      .++.+.+|++......                      ...+..+. .+...+.+++|+|+|+++++++. ++.|++||+
T Consensus       117 ~~g~v~v~~~~~~g~~----------------------~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~  174 (365)
T 1jof_A          117 FAGYGNVFSVSETGKL----------------------EKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRK  174 (365)
T ss_dssp             SCCEEEEEEECTTCCE----------------------EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             CCceEEEEccCCCCcC----------------------cceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEE
Confidence            6899999998632110                      00111111 25567899999999999887764 688999999


Q ss_pred             C-CCeEE--EEee--cCCCCCeEEEEEcCC--Cccc--CCCeEEEEcCCCCC
Q psy8430         301 E-TGTIL--QSLT--GHDEEPHILCVSSYY--SKVS--CDLFQRIQHLDCGT  343 (361)
Q Consensus       301 ~-~~~~~--~~~~--~h~~~v~~~~~s~s~--~~v~--~dg~i~iW~~d~~~  343 (361)
                      . +++..  ..+.  .|...+..+.+++++  ++++  .++.|.+|++|..+
T Consensus       175 ~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~  226 (365)
T 1jof_A          175 LASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT  226 (365)
T ss_dssp             CTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred             CCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCC
Confidence            8 77653  3343  234556666666653  2332  47899999655533

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.25  E-value=1.2e-09  Score=93.90  Aligned_cols=158  Identities=15%  Similarity=0.166  Sum_probs=114.3

Q ss_pred             eeeeEEee-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe--CCCCCeEEEEEecCCCEEEEEECCCcE
Q psy8430         151 CYKIRSFS-GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKSV  227 (361)
Q Consensus       151 ~~~~~~l~-~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~~~d~~i  227 (361)
                      ++.+..+. .+...+.+++++|+|+++++...++.|.+||. .++.+..+.  .+...+.+++++|+++++++...++.|
T Consensus       109 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i  187 (286)
T 1q7f_A          109 GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCV  187 (286)
T ss_dssp             SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEE
T ss_pred             CcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEE
Confidence            44455553 34567899999999998888888899999996 466666664  355678999999999988888889999


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC--CCCcEEEEEEcCCCCEEEEEeCCC-cEEEeeCCCCe
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG--HSNVVIAADWLSDGEQVITASWDR-VANLFDVETGT  304 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~d~-~v~iwd~~~~~  304 (361)
                      .+||....                           .+..+..  +...+..++++++|.++++...++ .|.+||. +++
T Consensus       188 ~~~~~~g~---------------------------~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~  239 (286)
T 1q7f_A          188 KVFNYEGQ---------------------------YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQ  239 (286)
T ss_dssp             EEEETTCC---------------------------EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSC
T ss_pred             EEEcCCCC---------------------------EEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCC
Confidence            99997432                           2233322  235788999999999888888776 9999995 577


Q ss_pred             EEEEeecCCCC--CeEEEEEcCC-Ccc-cCCCeEEEE
Q psy8430         305 ILQSLTGHDEE--PHILCVSSYY-SKV-SCDLFQRIQ  337 (361)
Q Consensus       305 ~~~~~~~h~~~--v~~~~~s~s~-~~v-~~dg~i~iW  337 (361)
                      .+..+..+...  +..+.+++.+ ++| ..|+.|++|
T Consensus       240 ~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~  276 (286)
T 1q7f_A          240 LISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIY  276 (286)
T ss_dssp             EEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEE
T ss_pred             EEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEE
Confidence            77777655432  3344444431 111 368999999

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.25  E-value=1.1e-09  Score=97.92  Aligned_cols=205  Identities=9%  Similarity=-0.015  Sum_probs=129.1

Q ss_pred             eEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEEeCC------C
Q psy8430         140 IVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS----------ADRTVRLWSTQTGKCVLQYSGH------S  203 (361)
Q Consensus       140 ~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s----------~d~~i~~wd~~~~~~~~~~~~h------~  203 (361)
                      .+..+.  ..+++.+.++..+..+  .++|+|+|+++++++          .+++|.+||..+++.+..+...      .
T Consensus        32 ~v~v~D--~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g  107 (361)
T 2oiz_A           32 RVHVYD--YTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGL  107 (361)
T ss_dssp             EEEEEE--TTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBC
T ss_pred             eEEEEE--CCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccC
Confidence            344443  3455667777777666  899999999998886          3678999999999888887632      3


Q ss_pred             CCeEEEEEecCCCEEEEEEC--CCcEEEEeccccccccC-CCCCCC-----CC-----------CC------CCCCCCce
Q psy8430         204 GSVNSVRFLPNKDLVLSASG--DKSVHIWQAVINWECLN-NDNDSD-----LD-----------ES------KEPDESSI  258 (361)
Q Consensus       204 ~~v~~v~~~~~~~~l~s~~~--d~~i~lwd~~~~~~~~~-~~~~~~-----~~-----------~~------~~~~~~~~  258 (361)
                      .....++|+|+|++|+++..  +++|.+||+.++..+.. ......     ..           ..      ........
T Consensus       108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~  187 (361)
T 2oiz_A          108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVA  187 (361)
T ss_dssp             CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEE
T ss_pred             CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEe
Confidence            45778999999999988874  68999999987755432 110000     00           00      00000000


Q ss_pred             ---------------------ecc---------cccEEEeCCC-----------------------CcEEEEEEcCCCCE
Q psy8430         259 ---------------------TLR---------TPVKELLGHS-----------------------NVVIAADWLSDGEQ  285 (361)
Q Consensus       259 ---------------------~~~---------~~~~~~~~~~-----------------------~~v~~~~~~~~~~~  285 (361)
                                           ...         ..+..+....                       .....++|+|+++.
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~  267 (361)
T 2oiz_A          188 SQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGR  267 (361)
T ss_dssp             EEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTE
T ss_pred             eeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCe
Confidence                                 000         0001111000                       00012688999888


Q ss_pred             EEEEeC-----------CCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcC--CCcccCCCeEEEEcCCCCCCCCcceeee
Q psy8430         286 VITASW-----------DRVANLFDVETGTILQSLTGHDEEPHILCVSSY--YSKVSCDLFQRIQHLDCGTSENPIHSVC  352 (361)
Q Consensus       286 l~s~~~-----------d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s--~~~v~~dg~i~iW~~d~~~~~~~~~~v~  352 (361)
                      ++.+..           .+.|.+||+.+++.+.++..+.  +..+.++++  +++++.++.|.+|  |..++.  .+.+.
T Consensus       268 lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~~~v~v~--D~~t~~--l~~~~  341 (361)
T 2oiz_A          268 MYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDGGNVNVY--DISQPE--PKLLR  341 (361)
T ss_dssp             EEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECSSCEEEE--ECSSSS--CEEEE
T ss_pred             EEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCCCeEEEE--ECCCCc--ceeeE
Confidence            887653           3479999999999999999877  777777766  3345455999999  774431  14455


Q ss_pred             ee
Q psy8430         353 VF  354 (361)
Q Consensus       353 ~~  354 (361)
                      .+
T Consensus       342 ~i  343 (361)
T 2oiz_A          342 TI  343 (361)
T ss_dssp             EE
T ss_pred             Ee
Confidence            54

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.23  E-value=2.2e-11  Score=118.91  Aligned_cols=113  Identities=18%  Similarity=0.161  Sum_probs=89.0

Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCC---CeEEEEEecCCCEEEEEEC---------CCcEEEEecc
Q psy8430         166 DVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG---SVNSVRFLPNKDLVLSASG---------DKSVHIWQAV  233 (361)
Q Consensus       166 ~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~---~v~~v~~~~~~~~l~s~~~---------d~~i~lwd~~  233 (361)
                      +++|+|+|.+++ ++.|++|++||+.+++....+.+|..   .|.+++|+|+|+.|++++.         |+.|++||+.
T Consensus        20 ~~~~s~dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~   98 (719)
T 1z68_A           20 FPNWISGQEYLH-QSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS   98 (719)
T ss_dssp             CCEESSSSEEEE-ECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred             ccEECCCCeEEE-EcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence            678999996554 55799999999999988777765543   4899999999999998876         7899999998


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEE
Q psy8430         234 INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ  307 (361)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~  307 (361)
                      ++..+..                        ..+   ...+..++|||||++|+.+. ++.|++||+.+++...
T Consensus        99 ~g~~~~~------------------------~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~  144 (719)
T 1z68_A           99 NGEFVRG------------------------NEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQ  144 (719)
T ss_dssp             TTEECCS------------------------SCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEE
T ss_pred             CCccccc------------------------eec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEE
Confidence            7632100                        111   14577899999999999986 7899999999887654

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.22  E-value=3.4e-09  Score=103.38  Aligned_cols=137  Identities=9%  Similarity=-0.011  Sum_probs=97.8

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCc-------
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASADR-----TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS-------  226 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~d~-----~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~-------  226 (361)
                      +|...+..++|+|||++|+.++.++     +|++||+.+++.+.....+ ..+..++|+|+|+.|+.++.++.       
T Consensus       122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~  200 (710)
T 2xdw_A          122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT  200 (710)
T ss_dssp             TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred             CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence            3545688999999999988776543     8999999999876543322 23678999999999999888766       


Q ss_pred             ---------EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC-----C
Q psy8430         227 ---------VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-----D  292 (361)
Q Consensus       227 ---------i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-----d  292 (361)
                               |.+|++.++...                      ...+.....|...+..+.|+|+|++|+.++.     +
T Consensus       201 ~~~~~~~~~v~~~~l~t~~~~----------------------~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~  258 (710)
T 2xdw_A          201 ETSTNLHQKLYYHVLGTDQSE----------------------DILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPV  258 (710)
T ss_dssp             CCCCCCCCEEEEEETTSCGGG----------------------CEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSC
T ss_pred             ccccCCCCEEEEEECCCCccc----------------------ceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCc
Confidence                     999998655210                      0011111224556889999999999988765     5


Q ss_pred             CcEEEeeCCC------Ce-EEEEeecCCCCCeE
Q psy8430         293 RVANLFDVET------GT-ILQSLTGHDEEPHI  318 (361)
Q Consensus       293 ~~v~iwd~~~------~~-~~~~~~~h~~~v~~  318 (361)
                      ..|++||+.+      +. ....+..+...+..
T Consensus       259 ~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~  291 (710)
T 2xdw_A          259 NRLWYCDLQQESNGITGILKWVKLIDNFEGEYD  291 (710)
T ss_dssp             CEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE
T ss_pred             cEEEEEECcccccccCCccceEEeeCCCCcEEE
Confidence            6899999987      53 45666666555544

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.20  E-value=2e-09  Score=96.78  Aligned_cols=172  Identities=13%  Similarity=0.004  Sum_probs=117.2

Q ss_pred             eecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEE--ecCCCEEEEE
Q psy8430         144 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF--LPNKDLVLSA  221 (361)
Q Consensus       144 ~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~--~~~~~~l~s~  221 (361)
                      |..+...++......+|...+..+.|+|||+.|+.++.++.|++||+.+++....+..+...+....|  +|++..++..
T Consensus        63 ~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~  142 (388)
T 3pe7_A           63 YLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGI  142 (388)
T ss_dssp             EEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEE
T ss_pred             EEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccc
Confidence            44444455666656667666667889999999999999999999999999877777766666655544  7899888743


Q ss_pred             E----------------------CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEE
Q psy8430         222 S----------------------GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADW  279 (361)
Q Consensus       222 ~----------------------~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  279 (361)
                      .                      .+..|.+||+.++                           ....+..+...+..+.|
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g---------------------------~~~~l~~~~~~~~~~~~  195 (388)
T 3pe7_A          143 EIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG---------------------------ESTVILQENQWLGHPIY  195 (388)
T ss_dssp             EEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC---------------------------CEEEEEEESSCEEEEEE
T ss_pred             cccCcccccccccchhhhhhccCCcceEEEEECCCC---------------------------ceEEeecCCccccccEE
Confidence            2                      3467889998765                           23444456677899999


Q ss_pred             cC-CCCEEEEEeCC------CcEEEeeCCCCeEEEEeecCCC--CCeEEEEEcCCC---cccC-----CCeEEEEcCCCC
Q psy8430         280 LS-DGEQVITASWD------RVANLFDVETGTILQSLTGHDE--EPHILCVSSYYS---KVSC-----DLFQRIQHLDCG  342 (361)
Q Consensus       280 ~~-~~~~l~s~~~d------~~v~iwd~~~~~~~~~~~~h~~--~v~~~~~s~s~~---~v~~-----dg~i~iW~~d~~  342 (361)
                      +| +|+.|+.++.+      ..|.++|...+.. ..+..+..  .+....+++++.   +++.     ++.|.+|  |+.
T Consensus       196 sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~--d~~  272 (388)
T 3pe7_A          196 RPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSA--DPE  272 (388)
T ss_dssp             ETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEE--CTT
T ss_pred             CCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEE--ecC
Confidence            99 99999887764      3688888875543 44444432  344455555532   1111     2249999  774


Q ss_pred             CCC
Q psy8430         343 TSE  345 (361)
Q Consensus       343 ~~~  345 (361)
                      +++
T Consensus       273 ~g~  275 (388)
T 3pe7_A          273 TLE  275 (388)
T ss_dssp             TCC
T ss_pred             CCc
Confidence            443

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.19  E-value=3.3e-09  Score=93.39  Aligned_cols=153  Identities=10%  Similarity=0.023  Sum_probs=112.7

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCC------------------------CcEEEEeCCCCeEEEEEe-CCCCCeEEEEEecCC
Q psy8430         161 RDGVWDVAVRPGQPVLGSASAD------------------------RTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNK  215 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~d------------------------~~i~~wd~~~~~~~~~~~-~h~~~v~~v~~~~~~  215 (361)
                      -+.+.+++++|+|+++++.+.+                        ++|.+||..+++.+..+. ++-..+..++++|++
T Consensus        23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g  102 (329)
T 3fvz_A           23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG  102 (329)
T ss_dssp             CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred             cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence            4779999999999999988877                        479999999898876664 445689999999999


Q ss_pred             CEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE---------eCCCCcEEEEEEcC-CCCE
Q psy8430         216 DLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL---------LGHSNVVIAADWLS-DGEQ  285 (361)
Q Consensus       216 ~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~v~~~~~~~-~~~~  285 (361)
                      +++++...++.|.+||......                         .+..+         .++......++++| +|.+
T Consensus       103 ~l~v~d~~~~~v~~~~~~g~~~-------------------------~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~l  157 (329)
T 3fvz_A          103 NYWVTDVALHQVFKLDPHSKEG-------------------------PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAV  157 (329)
T ss_dssp             CEEEEETTTTEEEEECTTCSSC-------------------------CSEEESBTTBCCCSTTCCSSEEEEEECTTTCCE
T ss_pred             CEEEEECCCCEEEEEeCCCCeE-------------------------EEEEecccCCCCCCccccCCCcEEEEeCCCCeE
Confidence            9888888899999999753310                         11111         23445788999999 7888


Q ss_pred             EEEEe-CCCcEEEeeCCCCeEEEEeecCCC----------CCeEEEEEcC--CCcc--cCCCeEEEEcCCC
Q psy8430         286 VITAS-WDRVANLFDVETGTILQSLTGHDE----------EPHILCVSSY--YSKV--SCDLFQRIQHLDC  341 (361)
Q Consensus       286 l~s~~-~d~~v~iwd~~~~~~~~~~~~h~~----------~v~~~~~s~s--~~~v--~~dg~i~iW~~d~  341 (361)
                      +++.+ .++.|++|| .+|..+..+.....          ....+.+...  .++|  ..++.|++|  |.
T Consensus       158 yv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~--~~  225 (329)
T 3fvz_A          158 FVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCF--KT  225 (329)
T ss_dssp             EEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEE--ET
T ss_pred             EEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEE--EC
Confidence            88886 689999999 56787777743221          2344555443  2233  278899999  65

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.19  E-value=1e-10  Score=114.65  Aligned_cols=183  Identities=9%  Similarity=-0.033  Sum_probs=115.9

Q ss_pred             eEEeeecCccceeeeEEeeccCCC-----eEEEEEcCCCCEEEEEeCC---------CcEEEEeCCCCeEEEEEeCCCCC
Q psy8430         140 IVSSFKTSLLSCYKIRSFSGHRDG-----VWDVAVRPGQPVLGSASAD---------RTVRLWSTQTGKCVLQYSGHSGS  205 (361)
Q Consensus       140 ~~~~~~~~~~~~~~~~~l~~h~~~-----V~~l~~~~~~~~l~s~s~d---------~~i~~wd~~~~~~~~~~~~h~~~  205 (361)
                      .+..|...  +++....+.+|...     ...+.|||||++|+.++.+         +.+.+||+.+++.. .+..|...
T Consensus        37 ~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~  113 (740)
T 4a5s_A           37 NILVFNAE--YGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNN  113 (740)
T ss_dssp             EEEEEETT--TCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTT
T ss_pred             cEEEEECC--CCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCc
Confidence            34444443  33444556676543     3457899999999998886         55679999998754 45667889


Q ss_pred             eEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCC---------cEEE
Q psy8430         206 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSN---------VVIA  276 (361)
Q Consensus       206 v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~v~~  276 (361)
                      +..++|+|+|+.|+.+. |+.|.+|++.++....-..                 .......+.++..         ...+
T Consensus       114 ~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~-----------------~g~~~~~~~g~~~~v~~ee~~~~~~~  175 (740)
T 4a5s_A          114 TQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITW-----------------TGKEDIIYNGITDWVYEEEVFSAYSA  175 (740)
T ss_dssp             EEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCS-----------------CCBTTTEEESBCCHHHHHHTSSSSBC
T ss_pred             ceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcC-----------------CCCccceecCcccccccchhcCCCcc
Confidence            99999999999998874 7899999987663221100                 0001112223322         2235


Q ss_pred             EEEcCCCCEEEEEeCCC------------------------------------cEEEeeCCC---Ce--EEEEee-----
Q psy8430         277 ADWLSDGEQVITASWDR------------------------------------VANLFDVET---GT--ILQSLT-----  310 (361)
Q Consensus       277 ~~~~~~~~~l~s~~~d~------------------------------------~v~iwd~~~---~~--~~~~~~-----  310 (361)
                      +.|||||++|+.++.|.                                    .|++||+.+   +.  ....+.     
T Consensus       176 ~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~  255 (740)
T 4a5s_A          176 LWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASM  255 (740)
T ss_dssp             EEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHH
T ss_pred             eEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccC
Confidence            88999999999876332                                    478899988   73  222333     


Q ss_pred             -cCCCCCeEEEEEcCCC----cc---cCCCeEEEEcCCCCCCC
Q psy8430         311 -GHDEEPHILCVSSYYS----KV---SCDLFQRIQHLDCGTSE  345 (361)
Q Consensus       311 -~h~~~v~~~~~s~s~~----~v---~~dg~i~iW~~d~~~~~  345 (361)
                       +|...+..+.+++++.    .+   ..+..|++|  |+.++.
T Consensus       256 ~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~--d~~tg~  296 (740)
T 4a5s_A          256 LIGDHYLCDVTWATQERISLQWLRRIQNYSVMDIC--DYDESS  296 (740)
T ss_dssp             HTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEE--EEETTT
T ss_pred             CCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEE--ECCCCc
Confidence             2555566656665522    11   134578999  665443

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.17  E-value=2.5e-10  Score=110.36  Aligned_cols=160  Identities=16%  Similarity=0.062  Sum_probs=106.9

Q ss_pred             eEEeeccCCCeE---------EEEEc--CCCCE-EEEEeC-CCcEEEEeCC--C-CeEEEEEeC-----CCCCeEEEEEe
Q psy8430         154 IRSFSGHRDGVW---------DVAVR--PGQPV-LGSASA-DRTVRLWSTQ--T-GKCVLQYSG-----HSGSVNSVRFL  212 (361)
Q Consensus       154 ~~~l~~h~~~V~---------~l~~~--~~~~~-l~s~s~-d~~i~~wd~~--~-~~~~~~~~~-----h~~~v~~v~~~  212 (361)
                      .+.+..|...+.         ...|+  |||+. |+.++. +..|.+|++.  . +. ...+..     |...+.+++|+
T Consensus        60 ~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~s  138 (662)
T 3azo_A           60 EESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLL  138 (662)
T ss_dssp             EEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEE
T ss_pred             cceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEEC
Confidence            455666766665         56565  99998 776654 5667777765  2 43 344554     66788999999


Q ss_pred             cCCCEEEEEECC----------CcEEEEeccc------cccccCCCCCCCCCCCCCCCCCceecccccEEEe-CCCCcEE
Q psy8430         213 PNKDLVLSASGD----------KSVHIWQAVI------NWECLNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVI  275 (361)
Q Consensus       213 ~~~~~l~s~~~d----------~~i~lwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~  275 (361)
                      |+|+.|+.++.|          ..|.+||+.+      +                           ....+. .+...+.
T Consensus       139 pDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---------------------------~~~~l~~~~~~~~~  191 (662)
T 3azo_A          139 PERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRS---------------------------AVRELSDDAHRFVT  191 (662)
T ss_dssp             TTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGG---------------------------GSEESSCSCSSEEC
T ss_pred             CCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCC---------------------------ceeEEEecCCCccc
Confidence            999999988876          5799999875      3                           223344 4556788


Q ss_pred             EEEEcCCCCEEEEEeCCC--------cEEEeeCC-CC---eEEEEeecCCCCCeEEEEEcCCC--cc-cCCCeEEEEcCC
Q psy8430         276 AADWLSDGEQVITASWDR--------VANLFDVE-TG---TILQSLTGHDEEPHILCVSSYYS--KV-SCDLFQRIQHLD  340 (361)
Q Consensus       276 ~~~~~~~~~~l~s~~~d~--------~v~iwd~~-~~---~~~~~~~~h~~~v~~~~~s~s~~--~v-~~dg~i~iW~~d  340 (361)
                      .++|+|||++|+.++.++        .|++||+. ++   +......+|...+....+++++.  ++ ..|+..+||.+|
T Consensus       192 ~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~  271 (662)
T 3azo_A          192 GPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVD  271 (662)
T ss_dssp             CCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEEC
T ss_pred             CceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEE
Confidence            899999999999887553        79999999 57   44444444556666644444321  11 267744444336


Q ss_pred             C
Q psy8430         341 C  341 (361)
Q Consensus       341 ~  341 (361)
                      .
T Consensus       272 ~  272 (662)
T 3azo_A          272 P  272 (662)
T ss_dssp             T
T ss_pred             C
Confidence            5

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.17  E-value=4.4e-09  Score=92.58  Aligned_cols=164  Identities=8%  Similarity=0.009  Sum_probs=114.7

Q ss_pred             eeeeEEee-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe-EEEEE---------eCCCCCeEEEEEec-CCCEE
Q psy8430         151 CYKIRSFS-GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-CVLQY---------SGHSGSVNSVRFLP-NKDLV  218 (361)
Q Consensus       151 ~~~~~~l~-~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~-~~~~~---------~~h~~~v~~v~~~~-~~~~l  218 (361)
                      ++.+..+. ++-.....++++|+|+++++...++.|++||..... .+..+         .++-.....|+++| ++.++
T Consensus        79 g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~ly  158 (329)
T 3fvz_A           79 AEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVF  158 (329)
T ss_dssp             CCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEE
T ss_pred             CeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEE
Confidence            44444443 455678999999999999998889999999985442 45555         24455789999999 78888


Q ss_pred             EEEE-CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe----------CCCCcEEEEEEcCC-CCEE
Q psy8430         219 LSAS-GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL----------GHSNVVIAADWLSD-GEQV  286 (361)
Q Consensus       219 ~s~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~-~~~l  286 (361)
                      ++.+ .++.|++|+....                           .+..+.          ++......++++|+ +.++
T Consensus       159 v~d~~~~~~I~~~~~~g~---------------------------~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~  211 (329)
T 3fvz_A          159 VSDGYCNSRIVQFSPSGK---------------------------FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLC  211 (329)
T ss_dssp             EEECSSCCEEEEECTTSC---------------------------EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEE
T ss_pred             EEeCCCCCeEEEEcCCCC---------------------------EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEE
Confidence            8886 6899999984321                           111121          12245789999998 7777


Q ss_pred             EEEeCCCcEEEeeCCCCeEEEEeec--CCCCCeEEEEEcC-------CCcc--cCCCeEEEEcCCCCC
Q psy8430         287 ITASWDRVANLFDVETGTILQSLTG--HDEEPHILCVSSY-------YSKV--SCDLFQRIQHLDCGT  343 (361)
Q Consensus       287 ~s~~~d~~v~iwd~~~~~~~~~~~~--h~~~v~~~~~s~s-------~~~v--~~dg~i~iW~~d~~~  343 (361)
                      ++...++.|++||..+|+.+..+..  +...+..+.++++       ..++  ..+..|++|  |..+
T Consensus       212 v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~--~~~~  277 (329)
T 3fvz_A          212 VADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVM--NFSS  277 (329)
T ss_dssp             EEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEE--ETTT
T ss_pred             EEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEE--EcCC
Confidence            7777889999999999999888853  3444554444441       1222  345689999  7633

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.16  E-value=8.8e-09  Score=89.07  Aligned_cols=158  Identities=11%  Similarity=0.022  Sum_probs=109.7

Q ss_pred             eEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCC----CCCeEEEEEecCCCEEEEEEC------
Q psy8430         154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGH----SGSVNSVRFLPNKDLVLSASG------  223 (361)
Q Consensus       154 ~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h----~~~v~~v~~~~~~~~l~s~~~------  223 (361)
                      ...+..+...+.+++++|+|.++++...++.|.+||..+++........    ...+..++++|+|+++++.+.      
T Consensus        61 ~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~  140 (296)
T 3e5z_A           61 LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKP  140 (296)
T ss_dssp             EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCG
T ss_pred             eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccc
Confidence            4566677888999999999998888877899999999888754333211    235678999999998887431      


Q ss_pred             -----------CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy8430         224 -----------DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD  292 (361)
Q Consensus       224 -----------d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d  292 (361)
                                 .+.|..++.. +                           ....+..+......++|+|+|+.+++.+.+
T Consensus       141 ~~~~~~~~~~~~~~l~~~~~~-g---------------------------~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~  192 (296)
T 3e5z_A          141 EEGYGGEMELPGRWVFRLAPD-G---------------------------TLSAPIRDRVKPNGLAFLPSGNLLVSDTGD  192 (296)
T ss_dssp             GGSSCCCCCSSSCEEEEECTT-S---------------------------CEEEEECCCSSEEEEEECTTSCEEEEETTT
T ss_pred             cccccccccCCCcEEEEECCC-C---------------------------CEEEeecCCCCCccEEECCCCCEEEEeCCC
Confidence                       2344444432 1                           233445566678899999999999878888


Q ss_pred             CcEEEeeCC-CCeE---EEEeecCCCCCeEEEEEcC-CCcccCCCeEEEEcCCC
Q psy8430         293 RVANLFDVE-TGTI---LQSLTGHDEEPHILCVSSY-YSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       293 ~~v~iwd~~-~~~~---~~~~~~h~~~v~~~~~s~s-~~~v~~dg~i~iW~~d~  341 (361)
                      +.|.+||+. ++..   ...+..+...+..+.+... .+.++.++.|.+|  |.
T Consensus       193 ~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~v~~~--~~  244 (296)
T 3e5z_A          193 NATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASAGDGVHVL--TP  244 (296)
T ss_dssp             TEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEETTEEEEE--CT
T ss_pred             CeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEcCCeEEEE--CC
Confidence            999999987 5654   3333334444455666554 2344457889999  65

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.15  E-value=1.4e-10  Score=113.60  Aligned_cols=116  Identities=9%  Similarity=0.054  Sum_probs=93.9

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCC-----eEEEEEecCCCEEEEEECC---------CcE
Q psy8430         162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS-----VNSVRFLPNKDLVLSASGD---------KSV  227 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~-----v~~v~~~~~~~~l~s~~~d---------~~i  227 (361)
                      ....++.|+|+|.+++++  |++|++||+.++++...+.+|...     ...+.|+|+|+.++.++.+         +.+
T Consensus        17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~   94 (740)
T 4a5s_A           17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY   94 (740)
T ss_dssp             CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred             ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence            446689999999988886  999999999999988778877643     2447899999999988876         556


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEE
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ  307 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~  307 (361)
                      .+||+.++.                           ...+..|...+...+|||||+.|+.+. |+.|++||+.++...+
T Consensus        95 ~~~d~~~~~---------------------------~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~  146 (740)
T 4a5s_A           95 DIYDLNKRQ---------------------------LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYR  146 (740)
T ss_dssp             EEEETTTTE---------------------------ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEE
T ss_pred             EEEECCCCc---------------------------EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEE
Confidence            799998762                           223445677899999999999999885 6899999999887554

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.14  E-value=1.7e-09  Score=97.11  Aligned_cols=148  Identities=9%  Similarity=-0.068  Sum_probs=108.8

Q ss_pred             cceeeeEEeeccCCCeEE-----EEEcCCCCEEEEEeC-CC--cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEE
Q psy8430         149 LSCYKIRSFSGHRDGVWD-----VAVRPGQPVLGSASA-DR--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLS  220 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~-----l~~~~~~~~l~s~s~-d~--~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s  220 (361)
                      .++..+..+..|...+..     .+|+|||+.|+.++. ++  .|.+||+.+++......++...+..+.|+|+++.|+.
T Consensus        18 ~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~   97 (388)
T 3pe7_A           18 STGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFY   97 (388)
T ss_dssp             TTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEE
T ss_pred             CCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEE
Confidence            445566777778776666     889999999998887 66  4888899998877776667666667889999999999


Q ss_pred             EECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEE--EcCCCCEEEEE---------
Q psy8430         221 ASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAAD--WLSDGEQVITA---------  289 (361)
Q Consensus       221 ~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~s~---------  289 (361)
                      ++.++.+.+||+.++.                          .......+...+....  ++|++.+++..         
T Consensus        98 ~~~~~~l~~~d~~~g~--------------------------~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~  151 (388)
T 3pe7_A           98 VKDGRNLMRVDLATLE--------------------------ENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVP  151 (388)
T ss_dssp             EETTTEEEEEETTTCC--------------------------EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC
T ss_pred             EeCCCeEEEEECCCCc--------------------------ceeeeechhhcccccceeECCCCCeeccccccCccccc
Confidence            9999999999997662                          2222334444444333  48999988753         


Q ss_pred             -------------eCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEc
Q psy8430         290 -------------SWDRVANLFDVETGTILQSLTGHDEEPHILCVSS  323 (361)
Q Consensus       290 -------------~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~  323 (361)
                                   ..+..|++||+.+++... +..+...+....+++
T Consensus       152 ~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp  197 (388)
T 3pe7_A          152 LTDWKKFHEFYFTKPCCRLMRVDLKTGESTV-ILQENQWLGHPIYRP  197 (388)
T ss_dssp             CCSHHHHHHHGGGCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEET
T ss_pred             ccccchhhhhhccCCcceEEEEECCCCceEE-eecCCccccccEECC
Confidence                         244679999999987544 444555666667777

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.13  E-value=1.1e-08  Score=90.06  Aligned_cols=161  Identities=7%  Similarity=-0.075  Sum_probs=112.0

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECC----CcE
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD----KSV  227 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d----~~i  227 (361)
                      .....+.++...+.+++|+|+|.+++++..++.|.+||..+++.......+...+.+++|+|+++++++...+    +.|
T Consensus        35 ~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i  114 (333)
T 2dg1_A           35 EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGI  114 (333)
T ss_dssp             EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEE
T ss_pred             ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceE
Confidence            3455666777888999999999988888889999999998887665554567889999999999988877766    689


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe--CCCCcEEEEEEcCCCCEEEEEeC------CCcEEEee
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASW------DRVANLFD  299 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~------d~~v~iwd  299 (361)
                      .+||..++..                          ...+.  .+...+..++++|+|.++++...      .+.|..||
T Consensus       115 ~~~d~~~~~~--------------------------~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~  168 (333)
T 2dg1_A          115 FAATENGDNL--------------------------QDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVS  168 (333)
T ss_dssp             EEECTTSCSC--------------------------EEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEEC
T ss_pred             EEEeCCCCEE--------------------------EEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEe
Confidence            9999765421                          00111  23457899999999988877654      35677777


Q ss_pred             CCCCeEEEEeecCCCCCeEEEEEcCC--Ccc--cCCCeEEEEcCCC
Q psy8430         300 VETGTILQSLTGHDEEPHILCVSSYY--SKV--SCDLFQRIQHLDC  341 (361)
Q Consensus       300 ~~~~~~~~~~~~h~~~v~~~~~s~s~--~~v--~~dg~i~iW~~d~  341 (361)
                      ..+++..... .+...+..+.++...  +++  ..++.|.+|  |.
T Consensus       169 ~~~~~~~~~~-~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~--d~  211 (333)
T 2dg1_A          169 PDFRTVTPII-QNISVANGIALSTDEKVLWVTETTANRLHRI--AL  211 (333)
T ss_dssp             TTSCCEEEEE-EEESSEEEEEECTTSSEEEEEEGGGTEEEEE--EE
T ss_pred             CCCCEEEEee-cCCCcccceEECCCCCEEEEEeCCCCeEEEE--Ee
Confidence            6655543322 222233444444432  222  257899999  65

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.13  E-value=1e-08  Score=87.85  Aligned_cols=161  Identities=9%  Similarity=0.007  Sum_probs=113.1

Q ss_pred             cceeeeEEeeccC-CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCC-CCCeEEEEEecCCCEEEEEEC-CC
Q psy8430         149 LSCYKIRSFSGHR-DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGH-SGSVNSVRFLPNKDLVLSASG-DK  225 (361)
Q Consensus       149 ~~~~~~~~l~~h~-~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~~~-d~  225 (361)
                      .+++.+.++..+. ..+.++.+.|+|++++  +.++.|..||. +|+.+..+..+ ...+.++.+.|+|+.+++.+. ++
T Consensus        23 ~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~   99 (276)
T 3no2_A           23 DTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPS   99 (276)
T ss_dssp             TTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTE
T ss_pred             CCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCC
Confidence            4556666666665 4788999999999888  45788999999 89988888864 357889999999999999887 77


Q ss_pred             cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE
Q psy8430         226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI  305 (361)
Q Consensus       226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~  305 (361)
                      .+..+|. .++.+...                 ..   .....++......+++.++|.++++...++.|..||.. |+.
T Consensus       100 ~v~~vd~-~Gk~l~~~-----------------~~---~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~  157 (276)
T 3no2_A          100 TILEVNM-KGEVLSKT-----------------EF---ETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL  157 (276)
T ss_dssp             EEEEECT-TSCEEEEE-----------------EE---CCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred             EEEEEeC-CCCEEEEE-----------------ec---cCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence            7877775 33211100                 00   00001122234456789999999999999999999998 999


Q ss_pred             EEEeecCCCCCeE-------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         306 LQSLTGHDEEPHI-------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       306 ~~~~~~h~~~v~~-------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      +.++..+..+...       +++++.     .++.|..+  |.
T Consensus       158 ~w~~~~~~~~~~~~~~~~g~~~v~~~-----~~~~v~~~--d~  193 (276)
T 3no2_A          158 LNSVKLSGTPFSSAFLDNGDCLVACG-----DAHCFVQL--NL  193 (276)
T ss_dssp             EEEEECSSCCCEEEECTTSCEEEECB-----TTSEEEEE--CT
T ss_pred             EEEEECCCCccceeEcCCCCEEEEeC-----CCCeEEEE--eC
Confidence            9888765333222       444444     56677777  55

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.12  E-value=1.5e-09  Score=96.95  Aligned_cols=128  Identities=11%  Similarity=0.013  Sum_probs=100.8

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccc
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC  238 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~  238 (361)
                      .+.+ |+.++|  ++.+|+++ .++.|++||+.+.........|...|.++.+.+.  .+++++.||.+.+||+..+.  
T Consensus        86 ~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~--  157 (388)
T 1xip_A           86 EIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKS--  157 (388)
T ss_dssp             ECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCC--
T ss_pred             eCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCc--
Confidence            4667 999999  88999998 8899999999876555566668888998887654  38889999999999997541  


Q ss_pred             cCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE--EEEe------e
Q psy8430         239 LNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI--LQSL------T  310 (361)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~--~~~~------~  310 (361)
                                              . ..   +...|.+++|||+|  ++.|..||.+++|+...+++  ..++      .
T Consensus       158 ------------------------~-~~---~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~  207 (388)
T 1xip_A          158 ------------------------T-KQ---LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELE  207 (388)
T ss_dssp             ------------------------E-EE---EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHH
T ss_pred             ------------------------c-cc---ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccc
Confidence                                    1 11   34689999999999  78899999999999988776  5666      2


Q ss_pred             ---cCCCCCeEEEEEcC
Q psy8430         311 ---GHDEEPHILCVSSY  324 (361)
Q Consensus       311 ---~h~~~v~~~~~s~s  324 (361)
                         +|...|.++.+.+.
T Consensus       208 ~~~~~~~~V~sI~wl~~  224 (388)
T 1xip_A          208 ELPVEEYSPLSVTILSP  224 (388)
T ss_dssp             TSCTTTSEEEEEEESSS
T ss_pred             cccCCCeeEEEEEEecC
Confidence               35666777655554

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.11  E-value=4.7e-09  Score=102.11  Aligned_cols=158  Identities=9%  Similarity=-0.056  Sum_probs=104.4

Q ss_pred             ccCCCeEEEEEcCCCCEEE-----EEeCCCcEEEEeCCCCeEEEEEeCCCCCe--EEEEEecCCCEEEEEECCCc-----
Q psy8430         159 GHRDGVWDVAVRPGQPVLG-----SASADRTVRLWSTQTGKCVLQYSGHSGSV--NSVRFLPNKDLVLSASGDKS-----  226 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~-----s~s~d~~i~~wd~~~~~~~~~~~~h~~~v--~~v~~~~~~~~l~s~~~d~~-----  226 (361)
                      +|...+..++|||||++|+     .|+.+.+|++||+.+++.+.  ..+...+  ..++|+|+|+.|+.++.|..     
T Consensus       118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~  195 (695)
T 2bkl_A          118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV  195 (695)
T ss_dssp             SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred             CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence            4666789999999999888     44445789999999987541  1122223  68899999999999998776     


Q ss_pred             --------EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC----c
Q psy8430         227 --------VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR----V  294 (361)
Q Consensus       227 --------i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~----~  294 (361)
                              |++|++.++...                      ...+.....+...+.++.|+|+|++|+.++.++    .
T Consensus       196 ~~~~~~~~v~~~~l~t~~~~----------------------~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~  253 (695)
T 2bkl_A          196 DERPGYTTIRYHTLGTEPSK----------------------DTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSEND  253 (695)
T ss_dssp             GGGGGGCEEEEEETTSCGGG----------------------CEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEE
T ss_pred             ccCCCCCEEEEEECCCCchh----------------------ceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceE
Confidence                    999998765210                      012222234556788999999999998887766    6


Q ss_pred             EEEeeCCCCeEEEEeecCCCCCeEEEEEcCCCcc-----cCCCeEEEEcCCCCC
Q psy8430         295 ANLFDVETGTILQSLTGHDEEPHILCVSSYYSKV-----SCDLFQRIQHLDCGT  343 (361)
Q Consensus       295 v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~~v-----~~dg~i~iW~~d~~~  343 (361)
                      |++||..++.. ..+..+...+...++..+.+++     ..++.|.+|  |+.+
T Consensus       254 l~~~~~~~~~~-~~l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~--d~~~  304 (695)
T 2bkl_A          254 VYWKRPGEKDF-RLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEV--DPAK  304 (695)
T ss_dssp             EEEECTTCSSC-EEEEECSSCCEEEEEETTEEEEEECTTCTTCEEEEE--BTTB
T ss_pred             EEEEcCCCCce-EEeecCCCceEEEEecCCcEEEEECCCCCCCEEEEE--eCCC
Confidence            77887766543 3444444443332221111111     135889999  6633

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.04  E-value=4.2e-08  Score=84.24  Aligned_cols=151  Identities=15%  Similarity=0.120  Sum_probs=107.4

Q ss_pred             cCCCeEEEEE-cCCCCEEEEEeC-CCcEEEEeCCCCeEEEEEe-CCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccc
Q psy8430         160 HRDGVWDVAV-RPGQPVLGSASA-DRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW  236 (361)
Q Consensus       160 h~~~V~~l~~-~~~~~~l~s~s~-d~~i~~wd~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~  236 (361)
                      |...+.++++ .+++.++++... ++.|.+|| .+++.+..+. .+...+.+++++|+++++++...++.|.+||.... 
T Consensus        75 ~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-  152 (286)
T 1q7f_A           75 QLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN-  152 (286)
T ss_dssp             CBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC-
T ss_pred             cccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC-
Confidence            5567899999 577777666643 88999999 5677776664 34467899999999998888888899999986422 


Q ss_pred             cccCCCCCCCCCCCCCCCCCceecccccEEEe--CCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCC-
Q psy8430         237 ECLNNDNDSDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD-  313 (361)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~-  313 (361)
                                                ....+.  ++...+..++++|+|.++++...++.|++||.. ++.+..+..+. 
T Consensus       153 --------------------------~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~  205 (286)
T 1q7f_A          153 --------------------------VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGI  205 (286)
T ss_dssp             --------------------------EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTT
T ss_pred             --------------------------EEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCc
Confidence                                      222222  345578999999999988888889999999974 66666665432 


Q ss_pred             -CCCeEEEEEcCC-Cccc--CCC-eEEEEcCCC
Q psy8430         314 -EEPHILCVSSYY-SKVS--CDL-FQRIQHLDC  341 (361)
Q Consensus       314 -~~v~~~~~s~s~-~~v~--~dg-~i~iW~~d~  341 (361)
                       ..+..+++.+.+ ++|+  .++ .|.+|  |.
T Consensus       206 ~~~p~~i~~d~~G~l~v~~~~~~~~i~~~--~~  236 (286)
T 1q7f_A          206 TNYPIGVGINSNGEILIADNHNNFNLTIF--TQ  236 (286)
T ss_dssp             SCSEEEEEECTTCCEEEEECSSSCEEEEE--CT
T ss_pred             cCCCcEEEECCCCCEEEEeCCCCEEEEEE--CC
Confidence             344555554431 2222  465 99999  64

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.02  E-value=2.3e-08  Score=97.44  Aligned_cols=158  Identities=10%  Similarity=-0.050  Sum_probs=102.0

Q ss_pred             eEEEEEcCCCCEEEEEeCCCc----------------EEEEeCCCCeE--EEEEe--CCCCCeEEEEEecCCCEEEEEEC
Q psy8430         164 VWDVAVRPGQPVLGSASADRT----------------VRLWSTQTGKC--VLQYS--GHSGSVNSVRFLPNKDLVLSASG  223 (361)
Q Consensus       164 V~~l~~~~~~~~l~s~s~d~~----------------i~~wd~~~~~~--~~~~~--~h~~~v~~v~~~~~~~~l~s~~~  223 (361)
                      +..++|+|||+.|+.++.++.                |++|++.++..  ...+.  .|...+..+.|+|+|++|+.++.
T Consensus       173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~  252 (710)
T 2xdw_A          173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR  252 (710)
T ss_dssp             SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred             cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence            678999999999999988876                99999988752  23333  35566889999999999887664


Q ss_pred             -----CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC----c
Q psy8430         224 -----DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR----V  294 (361)
Q Consensus       224 -----d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~----~  294 (361)
                           +..|.+||+.+...                   ..........+..+...+.. .|+|+|+.|+..+.++    .
T Consensus       253 ~~~~~~~~l~~~d~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~  312 (710)
T 2xdw_A          253 EGCDPVNRLWYCDLQQESN-------------------GITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYR  312 (710)
T ss_dssp             CSSSSCCEEEEEEGGGSSS-------------------SSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCE
T ss_pred             ccCCCccEEEEEECccccc-------------------ccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCE
Confidence                 56799999865100                   00000124455566655554 4888999887776543    5


Q ss_pred             EEEeeCCCCe--EEEEeecCCC--CCeEEEEE-cCCCc--ccCCCeEEEEcCCC
Q psy8430         295 ANLFDVETGT--ILQSLTGHDE--EPHILCVS-SYYSK--VSCDLFQRIQHLDC  341 (361)
Q Consensus       295 v~iwd~~~~~--~~~~~~~h~~--~v~~~~~s-~s~~~--v~~dg~i~iW~~d~  341 (361)
                      |.+||+.++.  ....+..|..  .+..+.++ ++.+.  ...|+..+||-+|.
T Consensus       313 l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~  366 (710)
T 2xdw_A          313 LINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDL  366 (710)
T ss_dssp             EEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEET
T ss_pred             EEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEEC
Confidence            9999998774  2345555543  34444444 22111  12677655554365

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.01  E-value=1.2e-08  Score=90.23  Aligned_cols=136  Identities=11%  Similarity=0.106  Sum_probs=92.4

Q ss_pred             eEEEEEcCCCCEEEEEeCC---------------------------CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC
Q psy8430         164 VWDVAVRPGQPVLGSASAD---------------------------RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD  216 (361)
Q Consensus       164 V~~l~~~~~~~~l~s~s~d---------------------------~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~  216 (361)
                      +..++|+|+|+.|+.++.+                           ..|.+||+.+++.+..+.. . .+..+.|+|+| 
T Consensus       106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-  182 (347)
T 2gop_A          106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-  182 (347)
T ss_dssp             EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-
T ss_pred             ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-
Confidence            9999999999988887642                           5799999998876455554 3 78899999999 


Q ss_pred             EEEEEECCC-------cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy8430         217 LVLSASGDK-------SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA  289 (361)
Q Consensus       217 ~l~s~~~d~-------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~  289 (361)
                      +++++..++       ...||.+.++                           ....+..+ ..+..+  +|+|++|+.+
T Consensus       183 ~~~~~~~~~~~~~~~~~~~l~~~d~~---------------------------~~~~l~~~-~~~~~~--spdg~~l~~~  232 (347)
T 2gop_A          183 IVVNVPHREIIPQYFKFWDIYIWEDG---------------------------KEEKMFEK-VSFYAV--DSDGERILLY  232 (347)
T ss_dssp             EEEEEECCCSSCCSSCCEEEEEEETT---------------------------EEEEEEEE-ESEEEE--EECSSCEEEE
T ss_pred             EEEEEecccccccccccccEEEeCCC---------------------------ceEEeccC-cceeeE--CCCCCEEEEE
Confidence            877776652       4556654322                           12223333 444444  8999998887


Q ss_pred             eCC--------CcEEEeeCCCCeEEEEeecCCCCCeE-------EEEEcCCCcccCCCeEEEEcCC
Q psy8430         290 SWD--------RVANLFDVETGTILQSLTGHDEEPHI-------LCVSSYYSKVSCDLFQRIQHLD  340 (361)
Q Consensus       290 ~~d--------~~v~iwd~~~~~~~~~~~~h~~~v~~-------~~~s~s~~~v~~dg~i~iW~~d  340 (361)
                      +.+        ..|.+||  +++.......+...+..       ++++++     .|+.++|| ++
T Consensus       233 ~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~sdg~~~~~~-----~~~~~~l~-~~  290 (347)
T 2gop_A          233 GKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKDGKVYFTLF-----EEGSVNLY-IW  290 (347)
T ss_dssp             ECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEETTEEEEEEE-----ETTEEEEE-EE
T ss_pred             EccccCCccccceEEEEC--CCceEeccccCCcccCCccEEcCcEEEEEe-----cCCcEEEE-Ec
Confidence            754        3688888  56554444444444543       344445     88999999 87

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=98.95  E-value=4.6e-08  Score=87.28  Aligned_cols=60  Identities=13%  Similarity=0.228  Sum_probs=47.9

Q ss_pred             cccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC--eEEEEeecCCCCCeEEEEEcC
Q psy8430         262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG--TILQSLTGHDEEPHILCVSSY  324 (361)
Q Consensus       262 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~--~~~~~~~~h~~~v~~~~~s~s  324 (361)
                      +.+..+..+.  +.+++|+|+|++|++++. +.|.+||..++  +.+.++..+......+.++++
T Consensus       297 ~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~  358 (361)
T 2oiz_A          297 QRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPV  358 (361)
T ss_dssp             EEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCC
T ss_pred             cEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCC
Confidence            4556666666  899999999999999887 99999999999  999988655555555666554

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=98.95  E-value=5.7e-09  Score=93.13  Aligned_cols=139  Identities=11%  Similarity=0.020  Sum_probs=104.1

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe-----------EEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430         163 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-----------CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       163 ~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~-----------~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd  231 (361)
                      .++.+++++...++++|+.++ +.+|++....           ...... +.+ |..++|  ++.+|+++ .++.|++||
T Consensus        39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~-lp~-V~~l~f--d~~~L~v~-~~~~l~v~d  112 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKE-IPD-VIFVCF--HGDQVLVS-TRNALYSLD  112 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEE-CTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred             cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEee-CCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence            689999999999999999985 5569865322           112233 666 999999  88899888 889999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG  311 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~  311 (361)
                      +.+..                          .......|...+.++.+.+.  .+++++.||.+.+||+.++....    
T Consensus       113 v~sl~--------------------------~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----  160 (388)
T 1xip_A          113 LEELS--------------------------EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----  160 (388)
T ss_dssp             SSSTT--------------------------CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----
T ss_pred             chhhh--------------------------ccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----
Confidence            87542                          12234456667888777654  38889999999999999887654    


Q ss_pred             CCCCCeEEEEEcCCCc-ccCCCeEEEEcCCC
Q psy8430         312 HDEEPHILCVSSYYSK-VSCDLFQRIQHLDC  341 (361)
Q Consensus       312 h~~~v~~~~~s~s~~~-v~~dg~i~iW~~d~  341 (361)
                      +...|.+++++..+.. +..||.+++|  +.
T Consensus       161 ~~~~Vs~v~WSpkG~~vg~~dg~i~~~--~~  189 (388)
T 1xip_A          161 LAQNVTSFDVTNSQLAVLLKDRSFQSF--AW  189 (388)
T ss_dssp             EEESEEEEEECSSEEEEEETTSCEEEE--EE
T ss_pred             ccCCceEEEEcCCceEEEEcCCcEEEE--cC
Confidence            3457888888877543 3589999999  55

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=98.93  E-value=7.5e-07  Score=83.97  Aligned_cols=161  Identities=9%  Similarity=-0.038  Sum_probs=106.5

Q ss_pred             ccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC--CCeEEEEEeCCCCCeEEEEEe----cCCCEEEEE
Q psy8430         148 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ--TGKCVLQYSGHSGSVNSVRFL----PNKDLVLSA  221 (361)
Q Consensus       148 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~--~~~~~~~~~~h~~~v~~v~~~----~~~~~l~s~  221 (361)
                      ..+.+.+.++... ..+..+.|+|||+++++++.|+.|.+||+.  +++.+..+.. ......++|+    |+|++++++
T Consensus       184 ~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~  261 (567)
T 1qks_A          184 GSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GSEARSIETSKMEGWEDKYAIAG  261 (567)
T ss_dssp             TTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-CSEEEEEEECCSTTCTTTEEEEE
T ss_pred             CCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-CCCCceeEEccccCCCCCEEEEE
Confidence            3455677777643 356799999999999999999999999996  7788888874 4557899999    699988776


Q ss_pred             EC-CCcEEEEeccccccccCCCCCCC-CC------C------CCCCCCCce-------------eccc----ccEEEeCC
Q psy8430         222 SG-DKSVHIWQAVINWECLNNDNDSD-LD------E------SKEPDESSI-------------TLRT----PVKELLGH  270 (361)
Q Consensus       222 ~~-d~~i~lwd~~~~~~~~~~~~~~~-~~------~------~~~~~~~~~-------------~~~~----~~~~~~~~  270 (361)
                      +. ++++.++|..+.+.+........ ..      .      .........             ....    .+..+ ..
T Consensus       262 n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~  340 (567)
T 1qks_A          262 AYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI-SA  340 (567)
T ss_dssp             EEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE-EC
T ss_pred             EccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee-ec
Confidence            65 58999999877655432211100 00      0      000000000             0000    00111 12


Q ss_pred             CCcEEEEEEcCCCCEEEEEe-CCCcEEEeeCCCCeEEEEeec
Q psy8430         271 SNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTG  311 (361)
Q Consensus       271 ~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~  311 (361)
                      ......+.|+|+|+++++++ .++.|.++|+.+++.+..+..
T Consensus       341 ~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~v  382 (567)
T 1qks_A          341 ERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDT  382 (567)
T ss_dssp             CSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred             cccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEec
Confidence            33455778999999987765 578899999999998877754

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=98.93  E-value=2.1e-08  Score=98.30  Aligned_cols=135  Identities=18%  Similarity=0.108  Sum_probs=90.6

Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCc--------
Q psy8430         160 HRDGVWDVAVRPGQPVLGSASAD-----RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS--------  226 (361)
Q Consensus       160 h~~~V~~l~~~~~~~~l~s~s~d-----~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~--------  226 (361)
                      |...+..++|+|||++|+.++.+     .+|++||+.+++.+.... +...+..++|+|+ +.|+.++.|+.        
T Consensus       161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~  238 (741)
T 1yr2_A          161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA  238 (741)
T ss_dssp             --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred             CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCccccccccc
Confidence            44468889999999998887654     469999999997654321 2222357899999 98888877654        


Q ss_pred             ------EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC-----cE
Q psy8430         227 ------VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR-----VA  295 (361)
Q Consensus       227 ------i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-----~v  295 (361)
                            |.+|++.++...                      ...+.....+...+.++.|+|+|++|+..+.++     .|
T Consensus       239 ~~~~~~v~~~~lgt~~~~----------------------~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l  296 (741)
T 1yr2_A          239 LNYNQTVWLHRLGTPQSA----------------------DQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTV  296 (741)
T ss_dssp             CCCCCEEEEEETTSCGGG----------------------CEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEE
T ss_pred             CCCCCEEEEEECCCCchh----------------------CEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceE
Confidence                  888887654210                      001111122334688999999999998877544     79


Q ss_pred             EEeeCCCC--eEEEEeecCCCCCeE
Q psy8430         296 NLFDVETG--TILQSLTGHDEEPHI  318 (361)
Q Consensus       296 ~iwd~~~~--~~~~~~~~h~~~v~~  318 (361)
                      ++||+.++  ++...+..+...+..
T Consensus       297 ~~~d~~~~~~~~~~~l~~~~~~~~~  321 (741)
T 1yr2_A          297 HVARVTNGKIGPVTALIPDLKAQWD  321 (741)
T ss_dssp             EEEEEETTEECCCEEEECSSSSCEE
T ss_pred             EEEECCCCCCcccEEecCCCCceEE
Confidence            99999877  324556555544443

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=98.92  E-value=1e-07  Score=81.57  Aligned_cols=133  Identities=14%  Similarity=0.080  Sum_probs=101.9

Q ss_pred             CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCC-CCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCC
Q psy8430         172 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHS-GSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDES  250 (361)
Q Consensus       172 ~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+++|++++.|+.|.+||..+|+.+..+..+. ..+.++.+.|+|++++  +.++.|..||. +++              
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~--------------   66 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGR--------------   66 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSC--------------
T ss_pred             CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCC--------------
Confidence            35699999999999999999999999998766 5789999999999988  45788999997 442              


Q ss_pred             CCCCCCceecccccEEEeCC-CCcEEEEEEcCCCCEEEEEeC-CCcEEEeeCCCCeEEEEeecCCC------C---Ce--
Q psy8430         251 KEPDESSITLRTPVKELLGH-SNVVIAADWLSDGEQVITASW-DRVANLFDVETGTILQSLTGHDE------E---PH--  317 (361)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd~~~~~~~~~~~~h~~------~---v~--  317 (361)
                                  .+..+..+ ...+.++.+.|+|+++++.+. ++.|..+|. +|+.+..+.....      .   +.  
T Consensus        67 ------------~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~  133 (276)
T 3no2_A           67 ------------ELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKN  133 (276)
T ss_dssp             ------------EEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEEC
T ss_pred             ------------EEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceEC
Confidence                        33334433 346888999999999999887 778888886 6887776652111      1   11  


Q ss_pred             ---EEEEEcCCCcccCCCeEEEEcCCC
Q psy8430         318 ---ILCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       318 ---~~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                         .++++..     .++.|..|  |.
T Consensus       134 ~~G~~lv~~~-----~~~~v~~~--d~  153 (276)
T 3no2_A          134 KKGNYLVPLF-----ATSEVREI--AP  153 (276)
T ss_dssp             TTSCEEEEET-----TTTEEEEE--CT
T ss_pred             CCCCEEEEec-----CCCEEEEE--CC
Confidence               1667777     88999999  66

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=98.89  E-value=9.5e-08  Score=82.52  Aligned_cols=159  Identities=13%  Similarity=-0.005  Sum_probs=107.0

Q ss_pred             eEEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430         154 IRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       154 ~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~  232 (361)
                      +..+..+.....+++|+|+|+ +++++..++.|..||..++  ...+..+...+.+++++|+++++++...++.|.+||.
T Consensus        20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~   97 (296)
T 3e5z_A           20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQRE   97 (296)
T ss_dssp             CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECS
T ss_pred             EEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcC
Confidence            345556777889999999998 7888888999999999877  5667778888999999999998887777889999998


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceecccccEEEeC-CCCcEEEEEEcCCCCEEEEE----e-------------CCCc
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGEQVITA----S-------------WDRV  294 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~----~-------------~d~~  294 (361)
                      .++....                       ......+ ....+..++++|+|+++++.    +             ..+.
T Consensus        98 ~~g~~~~-----------------------~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~  154 (296)
T 3e5z_A           98 PGGEWES-----------------------IADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRW  154 (296)
T ss_dssp             TTCCEEE-----------------------EECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCE
T ss_pred             CCCcEEE-----------------------EeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcE
Confidence            6552100                       0000111 12346678999999988873    2             1345


Q ss_pred             EEEeeCCCCeEEEEeecCCCCCeEEEEEcCCCc-c--cCCCeEEEEcCCC
Q psy8430         295 ANLFDVETGTILQSLTGHDEEPHILCVSSYYSK-V--SCDLFQRIQHLDC  341 (361)
Q Consensus       295 v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~~-v--~~dg~i~iW~~d~  341 (361)
                      |..+|.. ++. ..+..+......+.+++.... +  ..++.|.+|  |+
T Consensus       155 l~~~~~~-g~~-~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~--~~  200 (296)
T 3e5z_A          155 VFRLAPD-GTL-SAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRY--CL  200 (296)
T ss_dssp             EEEECTT-SCE-EEEECCCSSEEEEEECTTSCEEEEETTTTEEEEE--EE
T ss_pred             EEEECCC-CCE-EEeecCCCCCccEEECCCCCEEEEeCCCCeEEEE--EE
Confidence            6666655 443 334444444444444433111 1  267899999  55

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=98.88  E-value=9.8e-08  Score=84.21  Aligned_cols=100  Identities=10%  Similarity=0.111  Sum_probs=73.1

Q ss_pred             CCeEEEEEcCCCCEEEEEeCC---C--cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECC------------
Q psy8430         162 DGVWDVAVRPGQPVLGSASAD---R--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD------------  224 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~d---~--~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d------------  224 (361)
                      ..+..+.|+|||+.|+.++.+   +  .|.+|++.+++.......+ . +..++|+|+|+.|+.++.+            
T Consensus        59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~  136 (347)
T 2gop_A           59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD  136 (347)
T ss_dssp             ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred             ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence            568889999999988887754   2  4888899888766555533 3 9999999999988887642            


Q ss_pred             ---------------CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy8430         225 ---------------KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA  289 (361)
Q Consensus       225 ---------------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~  289 (361)
                                     ..|.+||+.++.                          ....+.. . .+..+.|+|+| +++++
T Consensus       137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~--------------------------~~~~l~~-~-~~~~~~~spdg-~~~~~  187 (347)
T 2gop_A          137 VPAWFDDLGFFDGEKTTFWIFDTESEE--------------------------VIEEFEK-P-RFSSGIWHRDK-IVVNV  187 (347)
T ss_dssp             CCCC---------CEEEEEEEETTTTE--------------------------EEEEEEE-E-TTCEEEEETTE-EEEEE
T ss_pred             cceeecCcccccCccceEEEEECCCCe--------------------------EEeeecC-C-CcccccCCCCe-EEEEE
Confidence                           468888876552                          1122332 2 67788999999 88877


Q ss_pred             eCC
Q psy8430         290 SWD  292 (361)
Q Consensus       290 ~~d  292 (361)
                      +.+
T Consensus       188 ~~~  190 (347)
T 2gop_A          188 PHR  190 (347)
T ss_dssp             ECC
T ss_pred             ecc
Confidence            654

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.88  E-value=4e-08  Score=88.20  Aligned_cols=126  Identities=11%  Similarity=0.072  Sum_probs=84.5

Q ss_pred             eeccCCCeEEEEEcC-CCCEEEEEeCC------CcEEEEeCCCCeEEEEEeCC--CCCeEEEEEecCCCEEEEEECC---
Q psy8430         157 FSGHRDGVWDVAVRP-GQPVLGSASAD------RTVRLWSTQTGKCVLQYSGH--SGSVNSVRFLPNKDLVLSASGD---  224 (361)
Q Consensus       157 l~~h~~~V~~l~~~~-~~~~l~s~s~d------~~i~~wd~~~~~~~~~~~~h--~~~v~~v~~~~~~~~l~s~~~d---  224 (361)
                      +..+...+..+.|+| ++..|+.++.+      ..|.+||+..+.... +..+  ...+..++|+|+|+.|+.++.+   
T Consensus       183 ~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~  261 (396)
T 3c5m_A          183 IHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK-IKEHAEGESCTHEFWIPDGSAMAYVSYFKGQ  261 (396)
T ss_dssp             EEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE-SSCCCTTEEEEEEEECTTSSCEEEEEEETTT
T ss_pred             eccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeE-eeccCCCccccceEECCCCCEEEEEecCCCC
Confidence            335778899999999 78877766543      368889987665333 3323  2358889999999987776544   


Q ss_pred             --CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEe-----------
Q psy8430         225 --KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITAS-----------  290 (361)
Q Consensus       225 --~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~-----------  290 (361)
                        +.|.+||+.++..                           ..+.... ... +.|+| +|+++++++           
T Consensus       262 ~~~~l~~~d~~~g~~---------------------------~~l~~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~  312 (396)
T 3c5m_A          262 TDRVIYKANPETLEN---------------------------EEVMVMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADAD  312 (396)
T ss_dssp             CCEEEEEECTTTCCE---------------------------EEEEECC-SEE-EEEECSSSSEEEEEECCC--------
T ss_pred             ccceEEEEECCCCCe---------------------------EEeeeCC-CCC-CCccCCCCceEEEecCCcceeecccc
Confidence              4499999876521                           1111111 122 78999 999888765           


Q ss_pred             -----CCCcEEEeeCCCCeEEEEeecCC
Q psy8430         291 -----WDRVANLFDVETGTILQSLTGHD  313 (361)
Q Consensus       291 -----~d~~v~iwd~~~~~~~~~~~~h~  313 (361)
                           .++.|++||+.+++.. .+..+.
T Consensus       313 ~~~~~~~~~i~~~d~~~~~~~-~l~~~~  339 (396)
T 3c5m_A          313 SYNIENDPFLYVLNTKAKSAQ-KLCKHS  339 (396)
T ss_dssp             --CCCCCCEEEEEETTTTBCC-EEEECC
T ss_pred             ccccCCCCcEEEEecccCceE-EccCCC
Confidence                 3477999999887643 444443

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=98.87  E-value=3.7e-07  Score=80.08  Aligned_cols=154  Identities=12%  Similarity=0.085  Sum_probs=99.2

Q ss_pred             eccCCCeEEEEEcCCCCEEEEEeCC----CcEEEEeCCCCeEEEEEe--CCCCCeEEEEEecCCCEEEEEEC------CC
Q psy8430         158 SGHRDGVWDVAVRPGQPVLGSASAD----RTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASG------DK  225 (361)
Q Consensus       158 ~~h~~~V~~l~~~~~~~~l~s~s~d----~~i~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~~~------d~  225 (361)
                      ..+...+.+++++|+|.+++++..+    +.|.+||..++.....+.  .+...+.+++++|+++++++...      .+
T Consensus        83 ~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~  162 (333)
T 2dg1_A           83 VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLG  162 (333)
T ss_dssp             ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCE
T ss_pred             eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCc
Confidence            3567889999999999988887766    689999998776543333  24567999999999988877654      24


Q ss_pred             cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEE-EeCCCcEEEeeCCC-C
Q psy8430         226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT-ASWDRVANLFDVET-G  303 (361)
Q Consensus       226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~~~d~~v~iwd~~~-~  303 (361)
                      .|..+|..++                           ....+..+...+..++|+|+|++++. .+.++.|.+||+.+ +
T Consensus       163 ~l~~~~~~~~---------------------------~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g  215 (333)
T 2dg1_A          163 GVYYVSPDFR---------------------------TVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDG  215 (333)
T ss_dssp             EEEEECTTSC---------------------------CEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred             eEEEEeCCCC---------------------------EEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCC
Confidence            4555554322                           11122223345788999999986654 45678999999863 3


Q ss_pred             eEEEE--------eecCCCCCeEEEEEcCC-Cccc--CCCeEEEEcCCC
Q psy8430         304 TILQS--------LTGHDEEPHILCVSSYY-SKVS--CDLFQRIQHLDC  341 (361)
Q Consensus       304 ~~~~~--------~~~h~~~v~~~~~s~s~-~~v~--~dg~i~iW~~d~  341 (361)
                      ..+..        +.++ ..+..+++...+ +.++  .++.|.+|  |.
T Consensus       216 ~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~--d~  261 (333)
T 2dg1_A          216 VTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVF--NK  261 (333)
T ss_dssp             SSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEE--CT
T ss_pred             cCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEE--CC
Confidence            32221        1111 233344444331 2222  47889999  65

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=98.86  E-value=1.7e-07  Score=82.41  Aligned_cols=165  Identities=8%  Similarity=-0.114  Sum_probs=112.6

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCC-----CCeEEEEEecCCCEEEEEE-
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHS-----GSVNSVRFLPNKDLVLSAS-  222 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~-----~~v~~v~~~~~~~~l~s~~-  222 (361)
                      .+++.+.++.. ......+++++++.++++...++.|.+||..+++....+....     .....+++ .++.++++.. 
T Consensus        72 ~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~  149 (328)
T 3dsm_A           72 NTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWS  149 (328)
T ss_dssp             TTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECT
T ss_pred             cccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCC
Confidence            45666677753 4678899999988555555489999999999998877776322     15667777 4444444443 


Q ss_pred             CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC----------
Q psy8430         223 GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD----------  292 (361)
Q Consensus       223 ~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----------  292 (361)
                      .++.|.+||+.++..                          ...+.. ......+.++|+|++++++..+          
T Consensus       150 ~~~~v~viD~~t~~~--------------------------~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~  202 (328)
T 3dsm_A          150 YQNRILKIDTETDKV--------------------------VDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEA  202 (328)
T ss_dssp             TCCEEEEEETTTTEE--------------------------EEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCC
T ss_pred             CCCEEEEEECCCCeE--------------------------EEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCC
Confidence            488999999876632                          222322 2234578899999977777655          


Q ss_pred             CcEEEeeCCCCeEEEEeecCC-CCCeEEEEEcC--CCcccCCCeEEEEcCCCCCCC
Q psy8430         293 RVANLFDVETGTILQSLTGHD-EEPHILCVSSY--YSKVSCDLFQRIQHLDCGTSE  345 (361)
Q Consensus       293 ~~v~iwd~~~~~~~~~~~~h~-~~v~~~~~s~s--~~~v~~dg~i~iW~~d~~~~~  345 (361)
                      +.|.+||..+++...++.... .....+.+++.  .++++. +.|.+|  |..++.
T Consensus       203 ~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~-~~v~~~--d~~t~~  255 (328)
T 3dsm_A          203 PSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN-NDIWRM--PVEADR  255 (328)
T ss_dssp             CEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES-SSEEEE--ETTCSS
T ss_pred             ceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc-cEEEEE--ECCCCc
Confidence            789999999999887776432 35666778754  334443 388888  664443

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.86  E-value=4.3e-09  Score=94.64  Aligned_cols=151  Identities=9%  Similarity=-0.091  Sum_probs=95.8

Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEE-------------------EEEecCCCEEEEE---
Q psy8430         164 VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNS-------------------VRFLPNKDLVLSA---  221 (361)
Q Consensus       164 V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~-------------------v~~~~~~~~l~s~---  221 (361)
                      ...+.|+|+|+.|+.++.++.|.+||+.+++....+..+......                   +.|+|+++.++.+   
T Consensus        83 ~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~  162 (396)
T 3c5m_A           83 TFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFY  162 (396)
T ss_dssp             TTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHH
T ss_pred             cccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeec
Confidence            334789999999999999999999999988776666545442222                   2455666654433   


Q ss_pred             --ECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCC------
Q psy8430         222 --SGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWD------  292 (361)
Q Consensus       222 --~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d------  292 (361)
                        ..+..|.+||+.++                           ....+..+...+..+.|+| ++..++.++.+      
T Consensus       163 ~~~~~~~l~~~d~~~g---------------------------~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~  215 (396)
T 3c5m_A          163 HTNPTCRLIKVDIETG---------------------------ELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVD  215 (396)
T ss_dssp             HTCCCEEEEEEETTTC---------------------------CEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCS
T ss_pred             cCCCcceEEEEECCCC---------------------------cEEeeccCCcccccceECCCCCCEEEEEecCCCCCCC
Confidence              34567888887654                           1223334566788999999 88877776543      


Q ss_pred             CcEEEeeCCCCeEEEEeecCC--CCCeEEEEEcCCC---cccCC-----CeEEEEcCCCCCC
Q psy8430         293 RVANLFDVETGTILQSLTGHD--EEPHILCVSSYYS---KVSCD-----LFQRIQHLDCGTS  344 (361)
Q Consensus       293 ~~v~iwd~~~~~~~~~~~~h~--~~v~~~~~s~s~~---~v~~d-----g~i~iW~~d~~~~  344 (361)
                      ..|.+||+..+.. ..+..+.  ..+..+.+++++.   +++.+     +.|++|  |+.++
T Consensus       216 ~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~--d~~~g  274 (396)
T 3c5m_A          216 ARMWLVNEDGSNV-RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKA--NPETL  274 (396)
T ss_dssp             CCCEEEETTSCCC-EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEE--CTTTC
T ss_pred             ceEEEEECCCCce-eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEE--ECCCC
Confidence            3588899876543 3333332  1344455555422   12122     459999  76443

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=98.85  E-value=6.6e-08  Score=94.00  Aligned_cols=149  Identities=6%  Similarity=-0.090  Sum_probs=96.8

Q ss_pred             EEEEEcCCCCEEEEEeCCCc-------------EEEEeCCCCe----EEEEEeCCCCCeEEEEEecCCCEEEEEECCC--
Q psy8430         165 WDVAVRPGQPVLGSASADRT-------------VRLWSTQTGK----CVLQYSGHSGSVNSVRFLPNKDLVLSASGDK--  225 (361)
Q Consensus       165 ~~l~~~~~~~~l~s~s~d~~-------------i~~wd~~~~~----~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~--  225 (361)
                      ..++|+|||+.|+.++.|..             |++|++.++.    .+.....|...+..+.|+|+|++++.++.++  
T Consensus       171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~  250 (695)
T 2bkl_A          171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS  250 (695)
T ss_dssp             CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred             cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence            67899999999999999876             9999998875    2333334557889999999999988777655  


Q ss_pred             --cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe---CCCcEEEeeC
Q psy8430         226 --SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS---WDRVANLFDV  300 (361)
Q Consensus       226 --~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~---~d~~v~iwd~  300 (361)
                        .|.+|+..++                           ....+..+...+....+ ++|.+++.+.   .++.|.+||+
T Consensus       251 ~~~l~~~~~~~~---------------------------~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~  302 (695)
T 2bkl_A          251 ENDVYWKRPGEK---------------------------DFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDP  302 (695)
T ss_dssp             EEEEEEECTTCS---------------------------SCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBT
T ss_pred             ceEEEEEcCCCC---------------------------ceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeC
Confidence              5556654322                           23445555555666666 5666444443   2578999999


Q ss_pred             CCCeE--EEEeecC--CCCCeEEEEEcCCC--cccCCCeEEEEcCCC
Q psy8430         301 ETGTI--LQSLTGH--DEEPHILCVSSYYS--KVSCDLFQRIQHLDC  341 (361)
Q Consensus       301 ~~~~~--~~~~~~h--~~~v~~~~~s~s~~--~v~~dg~i~iW~~d~  341 (361)
                      .++..  ...+..+  ...+..+.++.+.+  ....|+..+||.++.
T Consensus       303 ~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~  349 (695)
T 2bkl_A          303 AKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATL  349 (695)
T ss_dssp             TBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEET
T ss_pred             CCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeC
Confidence            87753  2344433  33344433332211  112899999995554

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=98.81  E-value=2e-07  Score=79.08  Aligned_cols=151  Identities=10%  Similarity=-0.091  Sum_probs=101.4

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccC
Q psy8430         161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLN  240 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~  240 (361)
                      ...+.+++++++|.++++...++.|.+|+..+.............+.+++++++++++++...++.|.+||.......  
T Consensus       107 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~--  184 (270)
T 1rwi_B          107 LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV--  184 (270)
T ss_dssp             CSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEE--
T ss_pred             cCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceE--
Confidence            367899999999998888778899999986655433322233356789999999998877777889999997643110  


Q ss_pred             CCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEE
Q psy8430         241 NDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILC  320 (361)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~  320 (361)
                                              .....+...+.+++++++|..+++...++.|.+||............+-..+..+.
T Consensus       185 ------------------------~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~  240 (270)
T 1rwi_B          185 ------------------------VLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVA  240 (270)
T ss_dssp             ------------------------ECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEE
T ss_pred             ------------------------eecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEE
Confidence                                    01112235678999999998777777788999999876543322222223344444


Q ss_pred             EEcCC-Ccc--cCCCeEEEE
Q psy8430         321 VSSYY-SKV--SCDLFQRIQ  337 (361)
Q Consensus       321 ~s~s~-~~v--~~dg~i~iW  337 (361)
                      +++.+ +++  ..++.|+++
T Consensus       241 ~~~~g~l~v~~~~~~~v~~~  260 (270)
T 1rwi_B          241 VDSDRTVYVADRGNDRVVKL  260 (270)
T ss_dssp             ECTTCCEEEEEGGGTEEEEE
T ss_pred             ECCCCCEEEEECCCCEEEEE
Confidence            44331 111  267888888

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=98.78  E-value=8.1e-07  Score=76.80  Aligned_cols=141  Identities=16%  Similarity=0.102  Sum_probs=96.7

Q ss_pred             CCeEEEEEcCCCCEEEEEeCC---------CcEEEEeCCC-CeEEEEEeCCCCCeEEEEEecCCCEEE-EEECCCcEEEE
Q psy8430         162 DGVWDVAVRPGQPVLGSASAD---------RTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW  230 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~d---------~~i~~wd~~~-~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~~i~lw  230 (361)
                      ..+++++++|+|+++++...+         ....+|.+.. ++... +..+....+.++|+|+++.++ +.+.++.|.+|
T Consensus        98 ~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~  176 (297)
T 3g4e_A           98 NRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAF  176 (297)
T ss_dssp             EEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEE
T ss_pred             CCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEcCCCCEEEEecCCCCcEEEE
Confidence            447889999999977765322         2345555543 33332 333445678999999998664 55567889999


Q ss_pred             ecc--ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEE
Q psy8430         231 QAV--INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS  308 (361)
Q Consensus       231 d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~  308 (361)
                      ++.  ++.                     .........+..+......++++++|.+.++....+.|.+||..+|+.+..
T Consensus       177 ~~d~~~G~---------------------~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~  235 (297)
T 3g4e_A          177 DYDLQTGQ---------------------ISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQT  235 (297)
T ss_dssp             EECTTTCC---------------------EEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEE
T ss_pred             eccCCCCc---------------------ccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEE
Confidence            873  221                     111112223333445778999999998888888888999999999999999


Q ss_pred             eecCCCCCeEEEEEcC
Q psy8430         309 LTGHDEEPHILCVSSY  324 (361)
Q Consensus       309 ~~~h~~~v~~~~~s~s  324 (361)
                      +..+...++++++.+.
T Consensus       236 i~~p~~~~t~~~f~g~  251 (297)
T 3g4e_A          236 VKLPVDKTTSCCFGGK  251 (297)
T ss_dssp             EECSSSBEEEEEEESG
T ss_pred             EECCCCCceEEEEeCC
Confidence            9887777788777754

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=98.76  E-value=1.6e-07  Score=91.29  Aligned_cols=135  Identities=12%  Similarity=0.072  Sum_probs=89.0

Q ss_pred             ccCCCeEEEEEcCCCCEEEEE-----eCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCc-------
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSA-----SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS-------  226 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~-----s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~-------  226 (361)
                      +|...+..++|||||++|+-+     +.+.+|++||+.+|+.+.... +......++|+ |++.|+.++.+..       
T Consensus       126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~  203 (693)
T 3iuj_A          126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSA  203 (693)
T ss_dssp             TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred             CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence            455678889999999988843     233579999999998654311 11113567899 9999998887743       


Q ss_pred             ------EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC-CCCcEEEEEEcCCCCEEEEEeC----CCcE
Q psy8430         227 ------VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGEQVITASW----DRVA  295 (361)
Q Consensus       227 ------i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~----d~~v  295 (361)
                            |.+|++.++...                      ...+..... |.....++.|+|+|++|+....    ++.|
T Consensus       204 ~~~~~~v~~~~lgt~~~~----------------------~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i  261 (693)
T 3iuj_A          204 RTDQHKVYFHRLGTAQED----------------------DRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRL  261 (693)
T ss_dssp             -CCCCEEEEEETTSCGGG----------------------CEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEE
T ss_pred             cCCCcEEEEEECCCCccc----------------------ceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEE
Confidence                  888988654210                      011222222 3445788999999999865443    2579


Q ss_pred             EEeeCCCCe-EEEEeecCCCCCe
Q psy8430         296 NLFDVETGT-ILQSLTGHDEEPH  317 (361)
Q Consensus       296 ~iwd~~~~~-~~~~~~~h~~~v~  317 (361)
                      +++|+.++. ....+..+.....
T Consensus       262 ~~~d~~~~~~~~~~l~~~~~~~~  284 (693)
T 3iuj_A          262 YVKDLSQENAPLLTVQGDLDADV  284 (693)
T ss_dssp             EEEETTSTTCCCEEEECSSSSCE
T ss_pred             EEEECCCCCCceEEEeCCCCceE
Confidence            999998763 3455655554443

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=98.75  E-value=4.2e-07  Score=85.68  Aligned_cols=143  Identities=13%  Similarity=-0.010  Sum_probs=105.1

Q ss_pred             cCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecc--ccccccCCCCCCCC
Q psy8430         170 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV--INWECLNNDNDSDL  247 (361)
Q Consensus       170 ~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~--~~~~~~~~~~~~~~  247 (361)
                      +|.+.++++...+++|.++|..+++.+..+. ....+..+.|+|+++++++++.|+.|.+||+.  +.            
T Consensus       164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~-~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~------------  230 (567)
T 1qks_A          164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLD-TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP------------  230 (567)
T ss_dssp             CGGGEEEEEETTTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC------------
T ss_pred             CCCceEEEEeCCCCeEEEEECCCCeEEEEEe-CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCC------------
Confidence            3445577788889999999999999888887 45577899999999999999999999999984  33            


Q ss_pred             CCCCCCCCCceecccccEEEeCCCCcEEEEEEc----CCCCEEEEEeCC-CcEEEeeCCCCeEEEEeecCC---------
Q psy8430         248 DESKEPDESSITLRTPVKELLGHSNVVIAADWL----SDGEQVITASWD-RVANLFDVETGTILQSLTGHD---------  313 (361)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~s~~~d-~~v~iwd~~~~~~~~~~~~h~---------  313 (361)
                                    +.+..+... .....++|+    |+|+++++++.. +.|.++|..+.+.+.++....         
T Consensus       231 --------------~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~  295 (567)
T 1qks_A          231 --------------TTVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYH  295 (567)
T ss_dssp             --------------CEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEE
T ss_pred             --------------cEeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccccccccccc
Confidence                          134445432 346789999    699999887764 889999999999988775321         


Q ss_pred             -C-CCeEEEEEcCC----CcccCCCeEEEEcCCCC
Q psy8430         314 -E-EPHILCVSSYY----SKVSCDLFQRIQHLDCG  342 (361)
Q Consensus       314 -~-~v~~~~~s~s~----~~v~~dg~i~iW~~d~~  342 (361)
                       . .+..+.++...    ..+..+|.|.++  |..
T Consensus       296 p~~rva~i~~s~~~~~~vv~~~~~g~v~~v--d~~  328 (567)
T 1qks_A          296 PEPRVAAILASHYRPEFIVNVKETGKILLV--DYT  328 (567)
T ss_dssp             SCCCEEEEEECSSSSEEEEEETTTTEEEEE--ETT
T ss_pred             CCCceEEEEEcCCCCEEEEEecCCCeEEEE--ecC
Confidence             2 23334443321    112367888888  663

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=98.72  E-value=4.2e-07  Score=77.07  Aligned_cols=152  Identities=9%  Similarity=-0.081  Sum_probs=102.5

Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe-CCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccc
Q psy8430         160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC  238 (361)
Q Consensus       160 h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~  238 (361)
                      +...+.+++++++|.++++.. ++.|.+||...... ..+. .....+.+++++|+++++++...++.|.+|+..+... 
T Consensus        65 ~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~-  141 (270)
T 1rwi_B           65 GLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ-  141 (270)
T ss_dssp             SCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC-
T ss_pred             CcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee-
Confidence            345688999999998766666 88999999876543 2333 2336789999999999888877788999997543211 


Q ss_pred             cCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE
Q psy8430         239 LNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI  318 (361)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~  318 (361)
                                               ..........+..++++++|+.+++...++.|.+||...+........+...+..
T Consensus       142 -------------------------~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~  196 (270)
T 1rwi_B          142 -------------------------TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWG  196 (270)
T ss_dssp             -------------------------EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEE
T ss_pred             -------------------------EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceE
Confidence                                     0001122335678899999997777777889999998876654433333234445


Q ss_pred             EEEEcC-CCccc--CCCeEEEEcCCC
Q psy8430         319 LCVSSY-YSKVS--CDLFQRIQHLDC  341 (361)
Q Consensus       319 ~~~s~s-~~~v~--~dg~i~iW~~d~  341 (361)
                      +.+... .++++  .++.|.+|  |.
T Consensus       197 i~~d~~g~l~v~~~~~~~v~~~--~~  220 (270)
T 1rwi_B          197 IAVDEAGTVYVTEHNTNQVVKL--LA  220 (270)
T ss_dssp             EEECTTCCEEEEETTTSCEEEE--CT
T ss_pred             EEECCCCCEEEEECCCCcEEEE--cC
Confidence            555443 22332  47889999  55

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=98.71  E-value=8.6e-07  Score=76.86  Aligned_cols=155  Identities=13%  Similarity=0.039  Sum_probs=105.7

Q ss_pred             CCeEEEEEcCCCCEEEEEeCC---------------CcEEEEeCCCCeEEEEEeCCCCCeEEEEEe----cCCCEEEEE-
Q psy8430         162 DGVWDVAVRPGQPVLGSASAD---------------RTVRLWSTQTGKCVLQYSGHSGSVNSVRFL----PNKDLVLSA-  221 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~d---------------~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~----~~~~~l~s~-  221 (361)
                      ..+.+++++++|+++++...+               +.|..|+.. ++..... .+......++|+    |+++.++.+ 
T Consensus       117 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~  194 (314)
T 1pjx_A          117 QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAE  194 (314)
T ss_dssp             BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEE
T ss_pred             cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEE
Confidence            458899999999988877655               567777765 5543332 344567899999    998765444 


Q ss_pred             ECCCcEEEEeccc-cccccCCCCCCCCCCCCCCCCCceecccccEEEeCCC-CcEEEEEEcCCCCEEEEEeCCCcEEEee
Q psy8430         222 SGDKSVHIWQAVI-NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHS-NVVIAADWLSDGEQVITASWDRVANLFD  299 (361)
Q Consensus       222 ~~d~~i~lwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~d~~v~iwd  299 (361)
                      ..++.|.+||+.. +.                     .........+.++. ..+..++++++|.++++...++.|.+||
T Consensus       195 ~~~~~i~~~~~~~~g~---------------------~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d  253 (314)
T 1pjx_A          195 TPTKKLWSYDIKGPAK---------------------IENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFG  253 (314)
T ss_dssp             TTTTEEEEEEEEETTE---------------------EEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred             CCCCeEEEEECCCCCc---------------------cccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEc
Confidence            5678999999752 21                     00011222233343 5678899999999888888889999999


Q ss_pred             CCCCeEEEEeecCCCCCeEEEEEcCC--Cccc--CCCeEEEEcCCC
Q psy8430         300 VETGTILQSLTGHDEEPHILCVSSYY--SKVS--CDLFQRIQHLDC  341 (361)
Q Consensus       300 ~~~~~~~~~~~~h~~~v~~~~~s~s~--~~v~--~dg~i~iW~~d~  341 (361)
                      ..+++.+..+..+...+.++.++...  ++++  .++.|..|  ++
T Consensus       254 ~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~--~~  297 (314)
T 1pjx_A          254 PDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKF--EW  297 (314)
T ss_dssp             TTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEE--EC
T ss_pred             CCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEE--eC
Confidence            98888777777666666666664442  2332  45688888  55

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=98.63  E-value=2.8e-06  Score=83.12  Aligned_cols=152  Identities=13%  Similarity=0.021  Sum_probs=97.2

Q ss_pred             eEEEEEcCCCCEEEEEeCCCc--------------EEEEeCCCCe--EEEEEeC--CCCCeEEEEEecCCCEEEEEECCC
Q psy8430         164 VWDVAVRPGQPVLGSASADRT--------------VRLWSTQTGK--CVLQYSG--HSGSVNSVRFLPNKDLVLSASGDK  225 (361)
Q Consensus       164 V~~l~~~~~~~~l~s~s~d~~--------------i~~wd~~~~~--~~~~~~~--h~~~v~~v~~~~~~~~l~s~~~d~  225 (361)
                      +..++|+|| +.|+.++.|+.              |++|++.++.  ....+..  +...+..+.|+|+|++++..+.++
T Consensus       211 ~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~  289 (741)
T 1yr2_A          211 FSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEG  289 (741)
T ss_dssp             SCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECT
T ss_pred             eccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEcc
Confidence            357889999 98888887664              8899997764  2333433  334689999999999888776543


Q ss_pred             -----cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC----CcEE
Q psy8430         226 -----SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD----RVAN  296 (361)
Q Consensus       226 -----~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----~~v~  296 (361)
                           .|.+||+.++..                        .+...+..+...+... ++|+|+.|+..+.+    +.|.
T Consensus       290 ~~~~~~l~~~d~~~~~~------------------------~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~  344 (741)
T 1yr2_A          290 TDPVNTVHVARVTNGKI------------------------GPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIV  344 (741)
T ss_dssp             TCSCCEEEEEEEETTEE------------------------CCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEE
T ss_pred             CCCcceEEEEECCCCCC------------------------cccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEE
Confidence                 788998764310                        0134455555545444 34889988888764    4499


Q ss_pred             EeeCCCC--eEEEEeecCCCCCeEEEEEcCCCc--ccCCCeEEEEcCCC
Q psy8430         297 LFDVETG--TILQSLTGHDEEPHILCVSSYYSK--VSCDLFQRIQHLDC  341 (361)
Q Consensus       297 iwd~~~~--~~~~~~~~h~~~v~~~~~s~s~~~--v~~dg~i~iW~~d~  341 (361)
                      +||+.++  .....+..+...+..+.++++.+.  ...|+..+||.+|.
T Consensus       345 ~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~  393 (741)
T 1yr2_A          345 RVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDL  393 (741)
T ss_dssp             EEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEET
T ss_pred             EEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeC
Confidence            9999875  333333444444444333333211  12789888885554

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=98.61  E-value=2.9e-06  Score=74.43  Aligned_cols=120  Identities=14%  Similarity=0.018  Sum_probs=85.6

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCC
Q psy8430         162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNN  241 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~  241 (361)
                      .....+.+.. +.++++...++.|.+||..+++.+..+. .......+++++++..+++...++.|.+||+.++..    
T Consensus        44 ~~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~----  117 (328)
T 3dsm_A           44 DVAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEI----  117 (328)
T ss_dssp             SCEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEE----
T ss_pred             ccceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeE----
Confidence            3456777753 4466666678999999999999988886 457789999999985555555899999999876532    


Q ss_pred             CCCCCCCCCCCCCCCceecccccEEEeCCC-----CcEEEEEEcCCCCEEEEEe--CCCcEEEeeCCCCeEEEEeec
Q psy8430         242 DNDSDLDESKEPDESSITLRTPVKELLGHS-----NVVIAADWLSDGEQVITAS--WDRVANLFDVETGTILQSLTG  311 (361)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~s~~--~d~~v~iwd~~~~~~~~~~~~  311 (361)
                                            ...+....     .....+++  ++..++.++  .++.|.+||..+++.+.++..
T Consensus       118 ----------------------~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~  170 (328)
T 3dsm_A          118 ----------------------TGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTI  170 (328)
T ss_dssp             ----------------------EEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC
T ss_pred             ----------------------EEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc
Confidence                                  22222211     14445666  455555555  488999999999998888764

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=98.61  E-value=1.2e-05  Score=68.90  Aligned_cols=153  Identities=10%  Similarity=0.031  Sum_probs=104.9

Q ss_pred             eeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEE-eCCCCCeEEEEEecCCCEEEEEECCCcEEEEecccc
Q psy8430         157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN  235 (361)
Q Consensus       157 l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~-~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~  235 (361)
                      +..+...+.+++++++|.++++...++.|.+||.. +...... ..+...+.++++++++.++++...++.|..||....
T Consensus        10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~   88 (299)
T 2z2n_A           10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGI   88 (299)
T ss_dssp             CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSC
T ss_pred             CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCc
Confidence            34566789999999999988877778999999988 6533222 235678999999999998888777889999986411


Q ss_pred             ccccCCCCCCCCCCCCCCCCCceecccccEEE--eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEE-eecC
Q psy8430         236 WECLNNDNDSDLDESKEPDESSITLRTPVKEL--LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS-LTGH  312 (361)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~-~~~h  312 (361)
                                                  ...+  ......+..++++++|..+++...++.|.+||. +++.... ...+
T Consensus        89 ----------------------------~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~  139 (299)
T 2z2n_A           89 ----------------------------IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNK  139 (299)
T ss_dssp             ----------------------------EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSST
T ss_pred             ----------------------------EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCC
Confidence                                        1111  124457889999999988888877889999998 5654432 2222


Q ss_pred             CCCCeEEEEEcC-CCccc--CCCeEEEEcCCC
Q psy8430         313 DEEPHILCVSSY-YSKVS--CDLFQRIQHLDC  341 (361)
Q Consensus       313 ~~~v~~~~~s~s-~~~v~--~dg~i~iW~~d~  341 (361)
                      ...+..+.+... .++++  .++.|..|  |.
T Consensus       140 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~--~~  169 (299)
T 2z2n_A          140 GSYPSFITLGSDNALWFTENQNNAIGRI--TE  169 (299)
T ss_dssp             TCCEEEEEECTTSCEEEEETTTTEEEEE--CT
T ss_pred             CCCCceEEEcCCCCEEEEeCCCCEEEEE--cC
Confidence            333444444332 11221  46788888  65

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=98.61  E-value=2e-05  Score=67.44  Aligned_cols=151  Identities=11%  Similarity=-0.007  Sum_probs=103.9

Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe--CCCCCeEEEEEecCCCEEEEEECCCcEEEEecccccc
Q psy8430         160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE  237 (361)
Q Consensus       160 h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~  237 (361)
                      +...+.+++++++|.++++...++.|..||.. ++. ..+.  .....+.++++.+++.++++...++.|..||. ++..
T Consensus        55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~  131 (299)
T 2z2n_A           55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKI  131 (299)
T ss_dssp             TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE
T ss_pred             ccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCE
Confidence            45779999999999988887778899999986 432 2232  34568899999999988888777889999987 3311


Q ss_pred             ccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEE-eecCCCCC
Q psy8430         238 CLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS-LTGHDEEP  316 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~-~~~h~~~v  316 (361)
                                               ...........+..++++++|..+++...++.|..||. +++.... +..+...+
T Consensus       132 -------------------------~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~  185 (299)
T 2z2n_A          132 -------------------------REYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGP  185 (299)
T ss_dssp             -------------------------EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCE
T ss_pred             -------------------------EEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcc
Confidence                                     01111223457889999999988887777889999998 6765442 22233334


Q ss_pred             eEEEEEcC-CCccc--CCCeEEEEcCCC
Q psy8430         317 HILCVSSY-YSKVS--CDLFQRIQHLDC  341 (361)
Q Consensus       317 ~~~~~s~s-~~~v~--~dg~i~iW~~d~  341 (361)
                      ..+.+... .++++  .++.|.+|  |.
T Consensus       186 ~~i~~~~~g~l~v~~~~~~~i~~~--~~  211 (299)
T 2z2n_A          186 VGITKGNDDALWFVEIIGNKIGRI--TT  211 (299)
T ss_dssp             EEEEECTTSSEEEEETTTTEEEEE--CT
T ss_pred             eeEEECCCCCEEEEccCCceEEEE--CC
Confidence            44444433 22332  46788888  65

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=98.61  E-value=1.3e-05  Score=72.61  Aligned_cols=151  Identities=18%  Similarity=0.106  Sum_probs=101.1

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCC--cEEEEecccccccc
Q psy8430         162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK--SVHIWQAVINWECL  239 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~--~i~lwd~~~~~~~~  239 (361)
                      .....++|+++++++++...++.|++||..++........ ..... ++|+|+++.++.+..++  .|.+|+...+... 
T Consensus       131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~-  207 (409)
T 3hrp_A          131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP-  207 (409)
T ss_dssp             CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE-
T ss_pred             CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee-
Confidence            4688999999999888888889999999988876555443 33344 99999999998888766  7888876543110 


Q ss_pred             CCCCCCCCCCCCCCCCCceecccccEEEeC-CCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEE----eecCCC
Q psy8430         240 NNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS----LTGHDE  314 (361)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~----~~~h~~  314 (361)
                                            .....+.. ....+.+++++|++..|+.+..++.|+.||..++.....    ..++..
T Consensus       208 ----------------------~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~  265 (409)
T 3hrp_A          208 ----------------------TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLG  265 (409)
T ss_dssp             ----------------------EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCC
T ss_pred             ----------------------EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCC
Confidence                                  00111112 345677899999655666677789999999987764322    222222


Q ss_pred             CC-e-EEEEEcC--CCcc--cCCCeEEEE
Q psy8430         315 EP-H-ILCVSSY--YSKV--SCDLFQRIQ  337 (361)
Q Consensus       315 ~v-~-~~~~s~s--~~~v--~~dg~i~iW  337 (361)
                      .. . .+.+++.  .+++  ..++.|+.|
T Consensus       266 ~~P~~~ia~~p~~g~lyv~d~~~~~I~~~  294 (409)
T 3hrp_A          266 TNPGPYLIYYFVDSNFYMSDQNLSSVYKI  294 (409)
T ss_dssp             CSSCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             CCccccEEEeCCCCEEEEEeCCCCEEEEE
Confidence            22 2 5566652  2233  367888888

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=98.58  E-value=6.9e-09  Score=92.92  Aligned_cols=140  Identities=16%  Similarity=0.082  Sum_probs=73.6

Q ss_pred             CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCC
Q psy8430         172 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESK  251 (361)
Q Consensus       172 ~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~  251 (361)
                      ++..+++++.|+.|..||..+|+.+..+..  +.+.+..+..++..+++++.|+.|..||..+++.......        
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~--------   77 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPF--------   77 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSC--------
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeec--------
Confidence            467899999999999999999999888875  5566655666777888888999999999977643211000        


Q ss_pred             CCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCC----CeEEEEEcCCCc
Q psy8430         252 EPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE----PHILCVSSYYSK  327 (361)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~----v~~~~~s~s~~~  327 (361)
                                 ...... ...++    +. .+..+++++.|+.++.||..+|+.+..+..+...    ....++.++   
T Consensus        78 -----------~~~~~~-~~sp~----~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~~~~~p~~~~v~~~~---  137 (369)
T 2hz6_A           78 -----------TIPELV-QASPC----RS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFADSLSPSTSLLYLGR---  137 (369)
T ss_dssp             -----------CHHHHH-TTCSC----C------CCCCEEEEEEEEECCC----------------------EEEEE---
T ss_pred             -----------cCcccc-ccCce----Ee-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCcccccccCCEEEEEe---
Confidence                       000000 01111    11 3446677777888888888888877666544311    112555566   


Q ss_pred             ccCCCeEEEEcCCCCCCC
Q psy8430         328 VSCDLFQRIQHLDCGTSE  345 (361)
Q Consensus       328 v~~dg~i~iW~~d~~~~~  345 (361)
                        .|+.|+.|  |..+++
T Consensus       138 --~dg~v~a~--d~~tG~  151 (369)
T 2hz6_A          138 --TEYTITMY--DTKTRE  151 (369)
T ss_dssp             --EEEEEECC--CSSSSS
T ss_pred             --cCCEEEEE--ECCCCC
Confidence              78888888  765554

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=98.57  E-value=1.8e-06  Score=76.77  Aligned_cols=144  Identities=13%  Similarity=0.084  Sum_probs=100.2

Q ss_pred             EEcCCCCEEEEEeC-----CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE----------CCCcEEEEec
Q psy8430         168 AVRPGQPVLGSASA-----DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS----------GDKSVHIWQA  232 (361)
Q Consensus       168 ~~~~~~~~l~s~s~-----d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~----------~d~~i~lwd~  232 (361)
                      ...|++..++....     ++.|.+.|..+++.+..+..-..+ . ++++|+|+.++.++          .++.|.+||.
T Consensus        39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~  116 (386)
T 3sjl_D           39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP  116 (386)
T ss_dssp             CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred             ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence            34688887777765     679999999999999988754444 4 99999999887765          3678999998


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceecccccEEEeCC-------CCcEEEEEEcCCCCEEEEEeC--CCcEEEeeCCCC
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGH-------SNVVIAADWLSDGEQVITASW--DRVANLFDVETG  303 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~s~~~--d~~v~iwd~~~~  303 (361)
                      .+..                          .+..+...       ......+.|+|+|++++.+..  ++.|.++|+.++
T Consensus       117 ~t~~--------------------------v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~  170 (386)
T 3sjl_D          117 VTLL--------------------------PTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK  170 (386)
T ss_dssp             TTCC--------------------------EEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTT
T ss_pred             CCCe--------------------------EEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCC
Confidence            7763                          23333211       123456889999999998874  689999999999


Q ss_pred             eEEEEeecCCCCCeEEEEEcC--CCcccCCCeEEEEcCCCCC
Q psy8430         304 TILQSLTGHDEEPHILCVSSY--YSKVSCDLFQRIQHLDCGT  343 (361)
Q Consensus       304 ~~~~~~~~h~~~v~~~~~s~s--~~~v~~dg~i~iW~~d~~~  343 (361)
                      +.+.++.....  ..+.-.+.  +..++.||.+-+.  ++.+
T Consensus       171 ~vv~tI~v~g~--~~~~P~g~~~~~~~~~DG~~~~v--~~~~  208 (386)
T 3sjl_D          171 AFKRMLDVPDC--YHIFPTAPDTFFMHCRDGSLAKV--AFGT  208 (386)
T ss_dssp             EEEEEEECCSE--EEEEEEETTEEEEEETTSCEEEE--ECCS
T ss_pred             cEEEEEECCCc--ceeecCCCceeEEECCCCCEEEE--ECCC
Confidence            99998864221  11000010  1123378888888  6643

>1uuj_A Platelet-activating factor acetylhydrolase IB ALP subunit; mitosis, neuroge cytoskeleton, cell division, microtubule; 1.75A {Mus musculus} SCOP: a.221.1.1

Probab=98.57  E-value=5.2e-09  Score=69.91  Aligned_cols=76  Identities=13%  Similarity=0.048  Sum_probs=62.8

Q ss_pred             ccccc--cccccceeecccchhhhHHHhhcCCcCCcccCChhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhcc
Q psy8430          10 KSTKH--KRTASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLD   87 (361)
Q Consensus        10 ~~~~~--~~~~~~~~~~l~~~~~~~~~~~L~~e~~~~~~~~~~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~~   87 (361)
                      +||+|  +||+|.|++||...+++.++++|+.|.+... +++...+       ++.-++++|..+.+||+|+.+|+.+..
T Consensus         4 iLt~rQ~eEL~kaI~~YL~~~~~~~~~~alr~e~~~~~-~~~~~~k-------y~gLLEKKWTSViRLQKKImdLE~~~~   75 (88)
T 1uuj_A            4 VLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDM-NEELDKK-------YAGLLEKKWTSVIRLQKKVMELESKLN   75 (88)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTTCCC-CHHHHHH-------HTTHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHhcCCC-Cchhhhh-------hhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence            68888  8999999999999999999999999986332 2332335       888999999999999999999998877


Q ss_pred             cccccc
Q psy8430          88 RESIIN   93 (361)
Q Consensus        88 ~~~~~~   93 (361)
                      ..+.+.
T Consensus        76 ~l~~el   81 (88)
T 1uuj_A           76 EAKEEF   81 (88)
T ss_dssp             HTTC--
T ss_pred             HHHHHH
Confidence            776554

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=98.56  E-value=4.7e-06  Score=74.48  Aligned_cols=136  Identities=9%  Similarity=-0.051  Sum_probs=93.5

Q ss_pred             EcCCCCEEEEEeC--CC---cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE----------CCCcEEEEecc
Q psy8430         169 VRPGQPVLGSASA--DR---TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS----------GDKSVHIWQAV  233 (361)
Q Consensus       169 ~~~~~~~l~s~s~--d~---~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~----------~d~~i~lwd~~  233 (361)
                      ..|++.+++.+..  ..   +|.+||..+++.+..+..-..+  .++++|+++.++.+.          .++.|.+||+.
T Consensus        28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~  105 (373)
T 2mad_H           28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV  105 (373)
T ss_pred             CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence            3466776666543  22   8899999999988887743333  999999999988875          36789999987


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCceecccccEEEeC-------CCCcEEEEEEcCCCCEEEEEeC--CCcEEEeeCCCCe
Q psy8430         234 INWECLNNDNDSDLDESKEPDESSITLRTPVKELLG-------HSNVVIAADWLSDGEQVITASW--DRVANLFDVETGT  304 (361)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~s~~~--d~~v~iwd~~~~~  304 (361)
                      +...                          +..+..       +......+.|+|+|++|+.++.  ++.|.++| .+++
T Consensus       106 t~~~--------------------------~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~  158 (373)
T 2mad_H          106 TFLP--------------------------IADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGS  158 (373)
T ss_pred             CCcE--------------------------EEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCC
Confidence            5532                          121111       1123457899999999999874  47899999 9999


Q ss_pred             EEEE-eecCCCCCeE------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         305 ILQS-LTGHDEEPHI------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       305 ~~~~-~~~h~~~v~~------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      .+.+ +..... +..      .+++.+     .||.+.+|  |.
T Consensus       159 ~~~~~i~~~~~-~~~~~~~~~~~~~~~-----~dg~~~~v--d~  194 (373)
T 2mad_H          159 SDDQLLSSPTC-YHIHPGAPSTFYLLC-----AQGGLAKT--DH  194 (373)
T ss_pred             EEeEEcCCCce-EEEEeCCCceEEEEc-----CCCCEEEE--EC
Confidence            8888 653221 110      223333     78998888  55

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=98.56  E-value=5e-05  Score=67.78  Aligned_cols=89  Identities=11%  Similarity=-0.145  Sum_probs=67.2

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEEeCC-------CCCeEEEEE
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS----------ADRTVRLWSTQTGKCVLQYSGH-------SGSVNSVRF  211 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s----------~d~~i~~wd~~~~~~~~~~~~h-------~~~v~~v~~  211 (361)
                      .+++.+.++.....+  .++++|||+.++.+.          .++.|.+||..+.+.+..+.-.       ......++|
T Consensus        55 ~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~  132 (373)
T 2mad_H           55 GSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNAN  132 (373)
T ss_pred             CCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEE
Confidence            355666777655555  899999999888876          3678999999988877776522       134568999


Q ss_pred             ecCCCEEEEEEC--CCcEEEEeccccccccC
Q psy8430         212 LPNKDLVLSASG--DKSVHIWQAVINWECLN  240 (361)
Q Consensus       212 ~~~~~~l~s~~~--d~~i~lwd~~~~~~~~~  240 (361)
                      +|+|++|+.+..  ++.|.++| .+++.+..
T Consensus       133 spDG~~l~v~n~~~~~~v~viD-~t~~~~~~  162 (373)
T 2mad_H          133 TPNNADLLFFQFAAGPAVGLVV-QGGSSDDQ  162 (373)
T ss_pred             CCCCCEEEEEecCCCCeEEEEE-CCCCEEeE
Confidence            999999998874  47899999 87765443

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=98.46  E-value=8e-09  Score=92.48  Aligned_cols=156  Identities=10%  Similarity=0.006  Sum_probs=79.2

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCC-CeE-EEEEecCCCEEEEEECCCcE
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG-SVN-SVRFLPNKDLVLSASGDKSV  227 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~-~v~-~v~~~~~~~~l~s~~~d~~i  227 (361)
                      +++.+-++..  +.+.+..+..++..+++++.|+.|..||..+|+.+..+..+.. .+. +..+. .+..+++++.|+.+
T Consensus        28 tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v  104 (369)
T 2hz6_A           28 TGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIW  104 (369)
T ss_dssp             TCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC------CCCCEEEEEE
T ss_pred             CCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEE
Confidence            3444444444  4455555666777888888999999999999887666653321 110 00111 34567788889999


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEE
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ  307 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~  307 (361)
                      ..||..+++...                          .+..+.    ...++|++..+++++.|+.|+.||.++|+.+.
T Consensus       105 ~a~D~~tG~~~w--------------------------~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W  154 (369)
T 2hz6_A          105 YVIDLLTGEKQQ--------------------------TLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRW  154 (369)
T ss_dssp             EEECCC----------------------------------------------------EEEEEEEEEEECCCSSSSSCCC
T ss_pred             EEEECCCCcEEE--------------------------EecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEE
Confidence            999998874321                          111111    12345688899999999999999999998765


Q ss_pred             Eeec--CCCCCe-------EEEEEcCCCcccCCCeEEEEcCCCCCCC
Q psy8430         308 SLTG--HDEEPH-------ILCVSSYYSKVSCDLFQRIQHLDCGTSE  345 (361)
Q Consensus       308 ~~~~--h~~~v~-------~~~~s~s~~~v~~dg~i~iW~~d~~~~~  345 (361)
                      .+..  ....+.       ..++.++     .||.|..|  |..+++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~v~~~~-----~dg~v~a~--d~~tG~  194 (369)
T 2hz6_A          155 NATYFDYAASLPEDDVDYKMSHFVSN-----GDGLVVTV--DSESGD  194 (369)
T ss_dssp             EEEEEEECCBCCCCCTTCCCCEEEEE-----TSCEEEEE--CTTTCC
T ss_pred             eEecccccCccccCCccccceEEEEC-----CCCEEEEE--ECCCCc
Confidence            5432  111111       2344455     78999999  775544

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=98.46  E-value=7.1e-05  Score=64.42  Aligned_cols=154  Identities=16%  Similarity=0.151  Sum_probs=93.1

Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeC----CCCCeEEEEEecCCCEEEEEECC---------Cc
Q psy8430         160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG----HSGSVNSVRFLPNKDLVLSASGD---------KS  226 (361)
Q Consensus       160 h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~----h~~~v~~v~~~~~~~~l~s~~~d---------~~  226 (361)
                      ....+.+++++++|+++++.  ++.|.+||..+++.......    ....+++++++|+|+++++...+         ..
T Consensus        52 ~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~  129 (297)
T 3g4e_A           52 MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQ  129 (297)
T ss_dssp             CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTC
T ss_pred             CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCC
Confidence            45679999999999966554  56899999988865433322    12458899999999977654322         23


Q ss_pred             EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEE-EeCCCcEEEeeC--CCC
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT-ASWDRVANLFDV--ETG  303 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~~~d~~v~iwd~--~~~  303 (361)
                      -.||.+....                          ....+..+......++|+|+++.++. .+.++.|.+||+  .+|
T Consensus       130 ~~l~~~d~~g--------------------------~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G  183 (297)
T 3g4e_A          130 GALYSLFPDH--------------------------HVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTG  183 (297)
T ss_dssp             EEEEEECTTS--------------------------CEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTC
T ss_pred             cEEEEEECCC--------------------------CEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCC
Confidence            4555543210                          11122233345688999999997754 455788999987  455


Q ss_pred             eE-----EEEeecCCCCCeEEEEEcC-CCccc--CCCeEEEEcCCCCC
Q psy8430         304 TI-----LQSLTGHDEEPHILCVSSY-YSKVS--CDLFQRIQHLDCGT  343 (361)
Q Consensus       304 ~~-----~~~~~~h~~~v~~~~~s~s-~~~v~--~dg~i~iW~~d~~~  343 (361)
                      ..     +..+..+......+.+... .+.|+  .++.|..|  |..+
T Consensus       184 ~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~--d~~t  229 (297)
T 3g4e_A          184 QISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRL--DPVT  229 (297)
T ss_dssp             CEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEE--CTTT
T ss_pred             cccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEE--cCCC
Confidence            43     2222222233344444332 11221  46779999  7643

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=98.41  E-value=1.1e-05  Score=69.66  Aligned_cols=118  Identities=10%  Similarity=0.110  Sum_probs=86.1

Q ss_pred             ccCCCeEEEEEc----CCCCEE-EEEeCCCcEEEEeCC-CCe-----EEEEEeCCC-CCeEEEEEecCCCEEEEEECCCc
Q psy8430         159 GHRDGVWDVAVR----PGQPVL-GSASADRTVRLWSTQ-TGK-----CVLQYSGHS-GSVNSVRFLPNKDLVLSASGDKS  226 (361)
Q Consensus       159 ~h~~~V~~l~~~----~~~~~l-~s~s~d~~i~~wd~~-~~~-----~~~~~~~h~-~~v~~v~~~~~~~~l~s~~~d~~  226 (361)
                      .+......++|+    |+++.| ++...++.|.+||.. ++.     ....+.++. ..+..++++++|+++++...++.
T Consensus       169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~  248 (314)
T 1pjx_A          169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSH  248 (314)
T ss_dssp             EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTE
T ss_pred             cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCE
Confidence            344557889999    999655 444567899999986 453     222333343 66889999999999888888999


Q ss_pred             EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEE-EeCCCcEEEeeCCC
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT-ASWDRVANLFDVET  302 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~~~d~~v~iwd~~~  302 (361)
                      |.+||..++.                          ....+..+...+.+++|+|+|++|+. ...++.|..|++..
T Consensus       249 i~~~d~~~g~--------------------------~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~  299 (314)
T 1pjx_A          249 IEVFGPDGGQ--------------------------PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             EEEECTTCBS--------------------------CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             EEEEcCCCCc--------------------------EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence            9999976441                          23444556678999999999995554 45567899999874

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=98.40  E-value=1.1e-05  Score=71.55  Aligned_cols=87  Identities=9%  Similarity=-0.130  Sum_probs=68.3

Q ss_pred             cCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEEeCC-------CCCeEE
Q psy8430         146 TSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS----------ADRTVRLWSTQTGKCVLQYSGH-------SGSVNS  208 (361)
Q Consensus       146 ~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s----------~d~~i~~wd~~~~~~~~~~~~h-------~~~v~~  208 (361)
                      .+..+.+.+.++.....+  .+.++|||..++.+.          .+++|.+||..+++.+.++...       ......
T Consensus        51 ID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~  128 (368)
T 1mda_H           51 SCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHI  128 (368)
T ss_dssp             EETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTS
T ss_pred             EECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcce
Confidence            345666777888766666  799999999888876          3689999999999999988643       134678


Q ss_pred             EEEecCCCEEEEEEC--CCcEEE--Eeccc
Q psy8430         209 VRFLPNKDLVLSASG--DKSVHI--WQAVI  234 (361)
Q Consensus       209 v~~~~~~~~l~s~~~--d~~i~l--wd~~~  234 (361)
                      ++++|+|++++.+..  +..+.+  +|+.+
T Consensus       129 ia~SpDGk~lyVan~~~~~~v~V~~iD~~t  158 (368)
T 1mda_H          129 IGNCASSACLLFFLFGSSAAAGLSVPGASD  158 (368)
T ss_dssp             EEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred             EEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence            999999999988875  356888  88865

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=98.36  E-value=4.2e-05  Score=66.89  Aligned_cols=139  Identities=9%  Similarity=-0.019  Sum_probs=91.8

Q ss_pred             CCeEEEEEcCCCCEEEEEeC------CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEE-ECCCcEEEEecc-
Q psy8430         162 DGVWDVAVRPGQPVLGSASA------DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA-SGDKSVHIWQAV-  233 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~------d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~-~~d~~i~lwd~~-  233 (361)
                      ..+.+++++|+|+++++...      .+.|..++  +++... +..+......++|+|+++.++.+ +.++.|.+|++. 
T Consensus       134 ~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~  210 (326)
T 2ghs_A          134 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDA  210 (326)
T ss_dssp             EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCT
T ss_pred             CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEccc
Confidence            35889999999997766542      24455555  555433 32234567899999999876544 457889999975 


Q ss_pred             -ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecC
Q psy8430         234 -INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH  312 (361)
Q Consensus       234 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h  312 (361)
                       ++....                    .......+.........++++++|.+.++...++.|.+||. +++.+..+..+
T Consensus       211 ~~Gl~~~--------------------~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~  269 (326)
T 2ghs_A          211 RTGLPTG--------------------KAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVP  269 (326)
T ss_dssp             TTCCBSS--------------------CCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECS
T ss_pred             ccCCccc--------------------CceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECC
Confidence             220000                    00111122223455678999999988887777789999998 67888888776


Q ss_pred             CCCCeEEEEEcC
Q psy8430         313 DEEPHILCVSSY  324 (361)
Q Consensus       313 ~~~v~~~~~s~s  324 (361)
                      ...+.++.+++.
T Consensus       270 ~~~~~~~af~g~  281 (326)
T 2ghs_A          270 GKQTTCPAFIGP  281 (326)
T ss_dssp             CSBEEEEEEEST
T ss_pred             CCCcEEEEEecC
Confidence            666777777643

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=98.34  E-value=0.00011  Score=64.32  Aligned_cols=150  Identities=15%  Similarity=0.036  Sum_probs=89.9

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeC----CCCCeEEEEEecCCCEEEEEECC----CcEEEEec
Q psy8430         161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG----HSGSVNSVRFLPNKDLVLSASGD----KSVHIWQA  232 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~----h~~~v~~v~~~~~~~~l~s~~~d----~~i~lwd~  232 (361)
                      ...+.+++|+++|+++++. .+ .|.+||..+++.......    ....+.+++++|+|+++++...+    +...||.+
T Consensus        89 ~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~  166 (326)
T 2ghs_A           89 PFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHV  166 (326)
T ss_dssp             SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEE
T ss_pred             CCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEE
Confidence            4679999999999877764 44 599999988875433221    12468899999999977655422    23444443


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEE-eCCCcEEEeeCC--CC-e----
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA-SWDRVANLFDVE--TG-T----  304 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~d~~v~iwd~~--~~-~----  304 (361)
                      ..+                           ....+..+......++|+|+|+.++.+ +.++.|.+||+.  +| .    
T Consensus       167 ~~g---------------------------~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~  219 (326)
T 2ghs_A          167 AKG---------------------------KVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKA  219 (326)
T ss_dssp             ETT---------------------------EEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCC
T ss_pred             eCC---------------------------cEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCc
Confidence            222                           111222223456789999999877555 456889999986  66 3    


Q ss_pred             -EEEEeecCCCCCeEEEEEcCC-Cccc--CCCeEEEEcCCC
Q psy8430         305 -ILQSLTGHDEEPHILCVSSYY-SKVS--CDLFQRIQHLDC  341 (361)
Q Consensus       305 -~~~~~~~h~~~v~~~~~s~s~-~~v~--~dg~i~iW~~d~  341 (361)
                       .+..+.........+.+...+ +.++  .++.|.+|  |.
T Consensus       220 ~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~--d~  258 (326)
T 2ghs_A          220 EVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRY--DT  258 (326)
T ss_dssp             EEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEE--CT
T ss_pred             eEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEE--CC
Confidence             222222222333334333321 1222  36788888  65

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=98.32  E-value=5.4e-05  Score=68.48  Aligned_cols=139  Identities=13%  Similarity=0.076  Sum_probs=84.4

Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEE----EeCCCCCe--EEEEEecC-CCEEEEEECCCcEEEEec
Q psy8430         160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ----YSGHSGSV--NSVRFLPN-KDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       160 h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~----~~~h~~~v--~~v~~~~~-~~~l~s~~~d~~i~lwd~  232 (361)
                      +...+.+++++|++..|+.+..++.|..||..++.....    ..++....  ..++|+|+ +.++++-..++.|..|+.
T Consensus       217 ~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~  296 (409)
T 3hrp_A          217 FSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITP  296 (409)
T ss_dssp             SCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred             hcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEec
Confidence            456678999999544555577788999999987753322    22222222  39999995 666666667889999986


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEeeCCCCeEEEEeec
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTG  311 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~  311 (361)
                      ...........       ...   ...   .-......-.....++++|+|.++++-+ .++.|+.||+.++.. .++.+
T Consensus       297 ~g~~~~~~g~~-------~~~---g~~---dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g  362 (409)
T 3hrp_A          297 DGECEWFCGSA-------TQK---TVQ---DGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAG  362 (409)
T ss_dssp             TCCEEEEEECT-------TCC---SCB---CEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEE
T ss_pred             CCCEEEEEeCC-------CCC---CcC---CCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeC
Confidence            53211000000       000   000   0000001123578999999999777777 789999999887764 44544


Q ss_pred             C
Q psy8430         312 H  312 (361)
Q Consensus       312 h  312 (361)
                      +
T Consensus       363 ~  363 (409)
T 3hrp_A          363 Q  363 (409)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=98.31  E-value=1.7e-05  Score=70.50  Aligned_cols=162  Identities=11%  Similarity=-0.131  Sum_probs=103.3

Q ss_pred             CccceeeeEEeeccCCCeEEEEEcCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEEeCC-------CCCeEEE
Q psy8430         147 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS----------ADRTVRLWSTQTGKCVLQYSGH-------SGSVNSV  209 (361)
Q Consensus       147 ~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s----------~d~~i~~wd~~~~~~~~~~~~h-------~~~v~~v  209 (361)
                      +..+.+.+.++.....+  .+.++|||++++.++          .++.|.+||..+++.+..+.-.       ......+
T Consensus        65 D~~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~  142 (386)
T 3sjl_D           65 DGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMT  142 (386)
T ss_dssp             ETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGE
T ss_pred             ECCCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceE
Confidence            34456677777766666  499999999877765          3678999999999988887522       1256679


Q ss_pred             EEecCCCEEEEEEC--CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEE
Q psy8430         210 RFLPNKDLVLSASG--DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI  287 (361)
Q Consensus       210 ~~~~~~~~l~s~~~--d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  287 (361)
                      +|+|+|++++.+..  ++.|.++|+.+.+                          .+..+....  + ...+....+.++
T Consensus       143 a~spDGk~lyVan~~~~~~VsVID~~t~~--------------------------vv~tI~v~g--~-~~~~P~g~~~~~  193 (386)
T 3sjl_D          143 SLTPDGKTLLFYQFSPAPAVGVVDLEGKA--------------------------FKRMLDVPD--C-YHIFPTAPDTFF  193 (386)
T ss_dssp             EECTTSSEEEEEECSSSCEEEEEETTTTE--------------------------EEEEEECCS--E-EEEEEEETTEEE
T ss_pred             EEcCCCCEEEEEEcCCCCeEEEEECCCCc--------------------------EEEEEECCC--c-ceeecCCCceeE
Confidence            99999999888864  6899999998763                          233332211  1 122333456677


Q ss_pred             EEeCCCcEEEeeCCC-CeEEEEeecCC----CCCeE-EEE-EcC--CCcccCCCeEEEEcCCC
Q psy8430         288 TASWDRVANLFDVET-GTILQSLTGHD----EEPHI-LCV-SSY--YSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       288 s~~~d~~v~iwd~~~-~~~~~~~~~h~----~~v~~-~~~-s~s--~~~v~~dg~i~iW~~d~  341 (361)
                      +.+.||.+.+.++.+ ++...+...+-    ..+.. ..+ +..  ..+++.+|.|.+.  |.
T Consensus       194 ~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~--d~  254 (386)
T 3sjl_D          194 MHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQI--DL  254 (386)
T ss_dssp             EEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEE--EC
T ss_pred             EECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEE--EC
Confidence            888888888888875 55432221111    11110 111 111  2345578899999  65

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=98.30  E-value=0.00019  Score=61.28  Aligned_cols=153  Identities=10%  Similarity=-0.001  Sum_probs=103.0

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE-EEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecccccc
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL-QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE  237 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~  237 (361)
                      .....+.+++++++|.++++...++.|.+||.. ++... .+......+.++++.+++.++++...++.|..||.. +..
T Consensus        17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~   94 (300)
T 2qc5_A           17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF   94 (300)
T ss_dssp             STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred             CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence            345678999999999988887788999999987 65433 222344679999999999988877778889999875 311


Q ss_pred             ccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEE-eecCCCCC
Q psy8430         238 CLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS-LTGHDEEP  316 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~-~~~h~~~v  316 (361)
                                               ...........+..++++++|.++++...++.|..||.. ++.... +......+
T Consensus        95 -------------------------~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~  148 (300)
T 2qc5_A           95 -------------------------TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYP  148 (300)
T ss_dssp             -------------------------EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCE
T ss_pred             -------------------------EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCc
Confidence                                     011112234578899999999988887778899999987 655422 22223334


Q ss_pred             eEEEEEcC-CCccc--CCCeEEEEcCCC
Q psy8430         317 HILCVSSY-YSKVS--CDLFQRIQHLDC  341 (361)
Q Consensus       317 ~~~~~s~s-~~~v~--~dg~i~iW~~d~  341 (361)
                      ..+.+... .++++  .++.|..|  |.
T Consensus       149 ~~i~~d~~g~l~v~~~~~~~i~~~--~~  174 (300)
T 2qc5_A          149 AFITLGSDNALWFTENQNNSIGRI--TN  174 (300)
T ss_dssp             EEEEECTTSSEEEEETTTTEEEEE--CT
T ss_pred             eeEEECCCCCEEEEecCCCeEEEE--CC
Confidence            44444332 11221  46677778  55

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=98.28  E-value=4.7e-05  Score=65.83  Aligned_cols=121  Identities=12%  Similarity=0.087  Sum_probs=82.3

Q ss_pred             EEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe---C-CCCCeEEEEEecCCCEEEE----EEC---
Q psy8430         155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS---G-HSGSVNSVRFLPNKDLVLS----ASG---  223 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~---~-h~~~v~~v~~~~~~~~l~s----~~~---  223 (361)
                      ..+..+...+..++++++|+++++...++.|.+|+.. ++......   + ....+.+++++|+|+++++    |..   
T Consensus        79 ~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~  157 (305)
T 3dr2_A           79 DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPS  157 (305)
T ss_dssp             EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGG
T ss_pred             EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccc
Confidence            4455667789999999999977776667899999986 55322211   1 1235678999999998886    322   


Q ss_pred             ----------CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC-
Q psy8430         224 ----------DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-  292 (361)
Q Consensus       224 ----------d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-  292 (361)
                                .+.|..||..++                           .+..+. .......++|+|+++.|+.+... 
T Consensus       158 ~~~~~~~~~~~~~v~~~d~~~g---------------------------~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~  209 (305)
T 3dr2_A          158 QGCPADPELAHHSVYRLPPDGS---------------------------PLQRMA-DLDHPNGLAFSPDEQTLYVSQTPE  209 (305)
T ss_dssp             GSCCCCCSSSCEEEEEECSSSC---------------------------CCEEEE-EESSEEEEEECTTSSEEEEEECCC
T ss_pred             cccccccccCCCeEEEEcCCCC---------------------------cEEEEe-cCCCCcceEEcCCCCEEEEEecCC
Confidence                      245666665433                           111222 33456789999999988887765 


Q ss_pred             -----CcEEEeeCCCCe
Q psy8430         293 -----RVANLFDVETGT  304 (361)
Q Consensus       293 -----~~v~iwd~~~~~  304 (361)
                           +.|.+||+..+.
T Consensus       210 ~~~~~~~i~~~~~~~~~  226 (305)
T 3dr2_A          210 QGHGSVEITAFAWRDGA  226 (305)
T ss_dssp             ---CCCEEEEEEEETTE
T ss_pred             cCCCCCEEEEEEecCCC
Confidence                 689999987543

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=98.28  E-value=0.0004  Score=59.18  Aligned_cols=152  Identities=9%  Similarity=-0.066  Sum_probs=101.6

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE-EEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecccccc
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL-QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE  237 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~  237 (361)
                      .+...+.+++++++|.++++...++.|..||.. ++... ........+.++++.+++.++++...++.|..||.. +..
T Consensus        59 ~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~  136 (300)
T 2qc5_A           59 TPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI  136 (300)
T ss_dssp             STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE
T ss_pred             CCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE
Confidence            344679999999999988887778899999987 65432 222245678999999999988887778899999875 311


Q ss_pred             ccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee--cCCCC
Q psy8430         238 CLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT--GHDEE  315 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~--~h~~~  315 (361)
                                               ....+......+..++++++|+..++...++.|..||. +++... +.  .+...
T Consensus       137 -------------------------~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~  189 (300)
T 2qc5_A          137 -------------------------YEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAA  189 (300)
T ss_dssp             -------------------------EEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCC
T ss_pred             -------------------------EEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCC
Confidence                                     00111223457889999999997777766788999998 565543 32  22233


Q ss_pred             CeEEEEEcC-CCccc--CCCeEEEEcCCC
Q psy8430         316 PHILCVSSY-YSKVS--CDLFQRIQHLDC  341 (361)
Q Consensus       316 v~~~~~s~s-~~~v~--~dg~i~iW~~d~  341 (361)
                      +..+.+... .++++  ..+.|.+|  |.
T Consensus       190 ~~~i~~d~~g~l~v~~~~~~~i~~~--~~  216 (300)
T 2qc5_A          190 PVGITSGNDGALWFVEIMGNKIGRI--TT  216 (300)
T ss_dssp             EEEEEECTTSSEEEEETTTTEEEEE--CT
T ss_pred             cceEEECCCCCEEEEccCCCEEEEE--cC
Confidence            444444432 12222  45678888  55

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=98.25  E-value=2.3e-05  Score=67.80  Aligned_cols=159  Identities=15%  Similarity=0.033  Sum_probs=101.7

Q ss_pred             eeEEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430         153 KIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  231 (361)
Q Consensus       153 ~~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd  231 (361)
                      .+..+..+........|+|+|+ +++++..++.|..|+. ++. ...+..+...+..++++++|+++++...++.|.+|+
T Consensus        36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~  113 (305)
T 3dr2_A           36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSD  113 (305)
T ss_dssp             CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred             ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEEC
Confidence            4455556677788999999998 6777778899999998 454 345555677899999999999777666668899998


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC-CCCcEEEEEEcCCCCEEEE----EeC-------------CC
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGEQVIT----ASW-------------DR  293 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s----~~~-------------d~  293 (361)
                      .. +...                       .......+ ....+..++++|+|.++++    |..             .+
T Consensus       114 ~~-g~~~-----------------------~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~  169 (305)
T 3dr2_A          114 AD-GQAH-----------------------LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHH  169 (305)
T ss_dssp             TT-SCEE-----------------------EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCE
T ss_pred             CC-CCEE-----------------------EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCC
Confidence            64 2100                       00001111 1134667899999998886    332             25


Q ss_pred             cEEEeeCCCCeEEEEeecCCCCCeEEEEEcCC--Cccc-C------CCeEEEEcCCC
Q psy8430         294 VANLFDVETGTILQSLTGHDEEPHILCVSSYY--SKVS-C------DLFQRIQHLDC  341 (361)
Q Consensus       294 ~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~--~~v~-~------dg~i~iW~~d~  341 (361)
                      .|+.||..+++.....  .-.....+.++...  ++++ .      ++.|.+|  |+
T Consensus       170 ~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~--~~  222 (305)
T 3dr2_A          170 SVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAF--AW  222 (305)
T ss_dssp             EEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEE--EE
T ss_pred             eEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEE--Ee
Confidence            6788888777654332  22233345555542  2232 2      2678888  55

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=98.19  E-value=3.7e-05  Score=67.72  Aligned_cols=124  Identities=11%  Similarity=0.037  Sum_probs=84.8

Q ss_pred             CCeEEEEEcCCCCEEEEEe--CCCcEEEEeCCCCeEEEEEe-------CCCCCeEEEEEecCCCEEEEEEC-----CCcE
Q psy8430         162 DGVWDVAVRPGQPVLGSAS--ADRTVRLWSTQTGKCVLQYS-------GHSGSVNSVRFLPNKDLVLSASG-----DKSV  227 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s--~d~~i~~wd~~~~~~~~~~~-------~h~~~v~~v~~~~~~~~l~s~~~-----d~~i  227 (361)
                      ..+..++++|+|+++++..  .++.++||.+.+++. ..+.       .+-..+..++++++++++++-..     ++.|
T Consensus        17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i   95 (343)
T 2qe8_A           17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL   95 (343)
T ss_dssp             SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred             CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence            6799999999999988864  234355666555543 3332       24578999999999887665543     5789


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe------CCCCcEEEEEEcCCCCEEEEE-e---CCCcEEE
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL------GHSNVVIAADWLSDGEQVITA-S---WDRVANL  297 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~s~-~---~d~~v~i  297 (361)
                      .+||+.++..                          ...+.      .+...+..+++++++..++.+ .   .++.|.+
T Consensus        96 ~~~d~~tg~~--------------------------~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v  149 (343)
T 2qe8_A           96 VAWDTLNNQL--------------------------SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIR  149 (343)
T ss_dssp             EEEETTTTEE--------------------------EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEE
T ss_pred             EEEECCCCeE--------------------------EEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEE
Confidence            9999876632                          11121      123456789999865555444 4   5788999


Q ss_pred             eeCCCCeEEEEeecC
Q psy8430         298 FDVETGTILQSLTGH  312 (361)
Q Consensus       298 wd~~~~~~~~~~~~h  312 (361)
                      ||+.+++....+.+|
T Consensus       150 ~d~~~g~~~r~~~~~  164 (343)
T 2qe8_A          150 VDLQTGLAARVLQGY  164 (343)
T ss_dssp             EETTTCCEEEECTTC
T ss_pred             EECCCCCEEEEecCC
Confidence            999988877766543

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=98.18  E-value=3.3e-05  Score=68.10  Aligned_cols=138  Identities=9%  Similarity=-0.047  Sum_probs=83.3

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEeCCCCeEEEEEeCC------CCCeEEEEEecCCCE-EEEEE---C
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASA-----DRTVRLWSTQTGKCVLQYSGH------SGSVNSVRFLPNKDL-VLSAS---G  223 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~-----d~~i~~wd~~~~~~~~~~~~h------~~~v~~v~~~~~~~~-l~s~~---~  223 (361)
                      +|...+..++++++|+++++-..     ++.|.+||+.+++.+..+...      ...+..++++|++.. +++..   .
T Consensus        64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~  143 (343)
T 2qe8_A           64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD  143 (343)
T ss_dssp             CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred             cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence            56788999999999876665543     578999999999877776532      245789999986444 45555   5


Q ss_pred             CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEE------EeCCCCcEEEEEEcCCCCEEEEEeCCC-cEE
Q psy8430         224 DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKE------LLGHSNVVIAADWLSDGEQVITASWDR-VAN  296 (361)
Q Consensus       224 d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l~s~~~d~-~v~  296 (361)
                      ++.|.+||+.++...............  . .........+..      +......+..++|+|+|++|+.+..++ .+.
T Consensus       144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~--~-~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~  220 (343)
T 2qe8_A          144 KAALIRVDLQTGLAARVLQGYPGIAPE--D-IDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMY  220 (343)
T ss_dssp             GCEEEEEETTTCCEEEECTTCTTTSCC--S-CCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEE
T ss_pred             CCeEEEEECCCCCEEEEecCCCccccc--c-cceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEE
Confidence            789999998766432211110000000  0 000000000000      000113468899999999999887766 444


Q ss_pred             Eee
Q psy8430         297 LFD  299 (361)
Q Consensus       297 iwd  299 (361)
                      .++
T Consensus       221 ~~~  223 (343)
T 2qe8_A          221 RIK  223 (343)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            444

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=98.18  E-value=0.00013  Score=70.67  Aligned_cols=172  Identities=9%  Similarity=-0.041  Sum_probs=103.2

Q ss_pred             EEEEcCCCCEEEEEeCCCc-------------------EEEEeCCCCeEEEEEeC--CC-------CCeEEEEEecCCC-
Q psy8430         166 DVAVRPGQPVLGSASADRT-------------------VRLWSTQTGKCVLQYSG--HS-------GSVNSVRFLPNKD-  216 (361)
Q Consensus       166 ~l~~~~~~~~l~s~s~d~~-------------------i~~wd~~~~~~~~~~~~--h~-------~~v~~v~~~~~~~-  216 (361)
                      .++++|+..+++.++.++.                   |..||..+|+.+..++.  |.       ..+.......+|+ 
T Consensus       239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~  318 (689)
T 1yiq_A          239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP  318 (689)
T ss_dssp             CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred             ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence            5789998888988887764                   99999999998887764  21       1222222223554 


Q ss_pred             --EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCC----CCCCce---------ecccccEEEeCC--CCcEEEEEE
Q psy8430         217 --LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKE----PDESSI---------TLRTPVKELLGH--SNVVIAADW  279 (361)
Q Consensus       217 --~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~----~~~~~~---------~~~~~~~~~~~~--~~~v~~~~~  279 (361)
                        .++.++.+|.+.++|..+++.+........  .+..    ......         ..........+.  ......++|
T Consensus       319 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~--~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~  396 (689)
T 1yiq_A          319 RKVLMQAPKNGFFYVIDRATGELLSAKGIVPQ--SWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSY  396 (689)
T ss_dssp             EEEEEECCTTSEEEEEETTTCCEEEEEESSCC--SSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEE
T ss_pred             EEEEEEECCCCeEEEEECCCCCEecccccccc--ccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceE
Confidence              688899999999999998876522110000  0000    000000         000000000000  001223678


Q ss_pred             cCCCCEEEEEeC---------------------------------------------CCcEEEeeCCCCeEEEEeecCCC
Q psy8430         280 LSDGEQVITASW---------------------------------------------DRVANLFDVETGTILQSLTGHDE  314 (361)
Q Consensus       280 ~~~~~~l~s~~~---------------------------------------------d~~v~iwd~~~~~~~~~~~~h~~  314 (361)
                      +|+...+++...                                             +|.|+.||+.+|+.+-.+..+..
T Consensus       397 dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~  476 (689)
T 1yiq_A          397 NPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI  476 (689)
T ss_dssp             ETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS
T ss_pred             CCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC
Confidence            888777776532                                             37799999999999887765543


Q ss_pred             CCeE-------EEEEcCCCcccCCCeEEEEcCCCCCCCC
Q psy8430         315 EPHI-------LCVSSYYSKVSCDLFQRIQHLDCGTSEN  346 (361)
Q Consensus       315 ~v~~-------~~~s~s~~~v~~dg~i~iW~~d~~~~~~  346 (361)
                      ....       +++.++     .||.|+.|  |..|++.
T Consensus       477 ~~~g~~~tagglvf~gt-----~dg~l~a~--D~~tG~~  508 (689)
T 1yiq_A          477 FNGGTLSTAGNLVFEGS-----ADGRVIAY--AADTGEK  508 (689)
T ss_dssp             CCCCEEEETTTEEEEEC-----TTSEEEEE--ETTTCCE
T ss_pred             ccCccceECCCEEEEEC-----CCCcEEEE--ECCCCcc
Confidence            2222       666667     99999999  8855443

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=98.17  E-value=3.7e-05  Score=69.47  Aligned_cols=113  Identities=12%  Similarity=0.066  Sum_probs=83.9

Q ss_pred             CCCCEEEEEeC-C----CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE----------CCCcEEEEecccc
Q psy8430         171 PGQPVLGSASA-D----RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS----------GDKSVHIWQAVIN  235 (361)
Q Consensus       171 ~~~~~l~s~s~-d----~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~----------~d~~i~lwd~~~~  235 (361)
                      +++..++.+.. +    ++|.++|..+++.+..+..-..+  .++++|+++.++.+.          .++.|.++|..+.
T Consensus        82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~  159 (426)
T 3c75_H           82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF  159 (426)
T ss_dssp             CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred             CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence            35554444443 2    69999999999999998844444  899999999887775          4678999998776


Q ss_pred             ccccCCCCCCCCCCCCCCCCCceecccccEEEeCC-------CCcEEEEEEcCCCCEEEEEeC--CCcEEEeeCCCCeEE
Q psy8430         236 WECLNNDNDSDLDESKEPDESSITLRTPVKELLGH-------SNVVIAADWLSDGEQVITASW--DRVANLFDVETGTIL  306 (361)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~s~~~--d~~v~iwd~~~~~~~  306 (361)
                      ..                          +..+...       ......+.|+|+|++++.+..  ++.|.+.|+.+++.+
T Consensus       160 ~v--------------------------v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv  213 (426)
T 3c75_H          160 LP--------------------------IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFD  213 (426)
T ss_dssp             CE--------------------------EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred             cE--------------------------EEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEE
Confidence            32                          2222211       123446789999999999875  578999999999999


Q ss_pred             EEeec
Q psy8430         307 QSLTG  311 (361)
Q Consensus       307 ~~~~~  311 (361)
                      .++..
T Consensus       214 ~~I~v  218 (426)
T 3c75_H          214 RMLDV  218 (426)
T ss_dssp             EEEEC
T ss_pred             EEEEc
Confidence            88874

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.16  E-value=0.00031  Score=59.07  Aligned_cols=163  Identities=11%  Similarity=-0.042  Sum_probs=101.7

Q ss_pred             eeeeEEeeccCC--CeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCCeEEEEEeC-CCCCeEEEEEecCCCEE-EEEECC
Q psy8430         151 CYKIRSFSGHRD--GVWDVAVRPGQPVLGSASA--DRTVRLWSTQTGKCVLQYSG-HSGSVNSVRFLPNKDLV-LSASGD  224 (361)
Q Consensus       151 ~~~~~~l~~h~~--~V~~l~~~~~~~~l~s~s~--d~~i~~wd~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l-~s~~~d  224 (361)
                      .+.+.++. |..  ....+.|++++.++++.+.  ++.|.++|+.+++.+..+.- .......+++.  +..+ ++.-.+
T Consensus         9 ~~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~   85 (266)
T 2iwa_A            9 VEVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLK   85 (266)
T ss_dssp             EEEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTC
T ss_pred             ceEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecC
Confidence            45556664 432  3578999998766665554  57999999999998888762 22233345554  4444 455568


Q ss_pred             CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCe
Q psy8430         225 KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT  304 (361)
Q Consensus       225 ~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~  304 (361)
                      +.+.++|..+..                          .+..+......-+.  ++++|+.++.+..++.|.++|..+.+
T Consensus        86 ~~v~viD~~t~~--------------------------v~~~i~~g~~~g~g--lt~Dg~~l~vs~gs~~l~viD~~t~~  137 (266)
T 2iwa_A           86 NIGFIYDRRTLS--------------------------NIKNFTHQMKDGWG--LATDGKILYGSDGTSILYEIDPHTFK  137 (266)
T ss_dssp             SEEEEEETTTTE--------------------------EEEEEECCSSSCCE--EEECSSSEEEECSSSEEEEECTTTCC
T ss_pred             CEEEEEECCCCc--------------------------EEEEEECCCCCeEE--EEECCCEEEEECCCCeEEEEECCCCc
Confidence            899999987653                          23333221112233  44588888888788999999999999


Q ss_pred             EEEEeecCCC--C---CeEEEEEcCCCcc--cCCCeEEEEcCCCCCCCC
Q psy8430         305 ILQSLTGHDE--E---PHILCVSSYYSKV--SCDLFQRIQHLDCGTSEN  346 (361)
Q Consensus       305 ~~~~~~~h~~--~---v~~~~~s~s~~~v--~~dg~i~iW~~d~~~~~~  346 (361)
                      .+.++.....  +   +..+.+..+.+++  ..++.|.+-  |..|++.
T Consensus       138 v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vI--D~~tg~V  184 (266)
T 2iwa_A          138 LIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARI--SAKDGTL  184 (266)
T ss_dssp             EEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEE--ETTTCCE
T ss_pred             EEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEE--ECCCCcE
Confidence            8888764321  1   2233333332222  256788888  8755443

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=98.15  E-value=0.00014  Score=70.63  Aligned_cols=148  Identities=12%  Similarity=0.061  Sum_probs=91.6

Q ss_pred             EEEEEcCCCCEEEEEeCCCc-------------EEEEeCCCCeE--EEEEe--C-CCCCeEEEEEecCCCEEEEE-ECC-
Q psy8430         165 WDVAVRPGQPVLGSASADRT-------------VRLWSTQTGKC--VLQYS--G-HSGSVNSVRFLPNKDLVLSA-SGD-  224 (361)
Q Consensus       165 ~~l~~~~~~~~l~s~s~d~~-------------i~~wd~~~~~~--~~~~~--~-h~~~v~~v~~~~~~~~l~s~-~~d-  224 (361)
                      ..++|+ ||+.|+.++.+..             |++|++.++..  ...+.  . |...+..+.|+|+|++++.. +.+ 
T Consensus       178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~  256 (693)
T 3iuj_A          178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST  256 (693)
T ss_dssp             CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred             ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence            567899 9999999888743             99999977632  33333  3 44567899999999987543 322 


Q ss_pred             --CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC-C---CcEEEe
Q psy8430         225 --KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-D---RVANLF  298 (361)
Q Consensus       225 --~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d---~~v~iw  298 (361)
                        ..|.+||+.++.                         .....+..+....... |+++|..|+..+. +   +.|..+
T Consensus       257 ~~~~i~~~d~~~~~-------------------------~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~  310 (693)
T 3iuj_A          257 SGNRLYVKDLSQEN-------------------------APLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTV  310 (693)
T ss_dssp             SCCEEEEEETTSTT-------------------------CCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEE
T ss_pred             CCcEEEEEECCCCC-------------------------CceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEE
Confidence              478899886541                         1344555566655554 6666776655443 3   579999


Q ss_pred             eCCCCeE--EEEeecCCCCCeEEEEEcCCCcc--cCCC--eEEEEcCCC
Q psy8430         299 DVETGTI--LQSLTGHDEEPHILCVSSYYSKV--SCDL--FQRIQHLDC  341 (361)
Q Consensus       299 d~~~~~~--~~~~~~h~~~v~~~~~s~s~~~v--~~dg--~i~iW~~d~  341 (361)
                      |+.++..  ...+..|...+..+-..+..+.+  ..||  .|++|  |.
T Consensus       311 d~~~~~~~~~~~l~~~~~~~~~~s~~g~~lv~~~~~~g~~~l~~~--d~  357 (693)
T 3iuj_A          311 DAANPGPAHWRDLIPERQQVLTVHSGSGYLFAEYMVDATARVEQF--DY  357 (693)
T ss_dssp             ETTSCCGGGCEEEECCCSSCEEEEEETTEEEEEEEETTEEEEEEE--CT
T ss_pred             eCCCCCccccEEEecCCCCEEEEEEECCEEEEEEEECCeeEEEEE--EC
Confidence            9987654  34555555444332222221111  1454  67788  55

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=98.12  E-value=0.00014  Score=65.63  Aligned_cols=89  Identities=9%  Similarity=-0.139  Sum_probs=68.7

Q ss_pred             ccceeeeEEeeccCCCeEEEEEcCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEEeCC-------CCCeEEEE
Q psy8430         148 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS----------ADRTVRLWSTQTGKCVLQYSGH-------SGSVNSVR  210 (361)
Q Consensus       148 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s----------~d~~i~~wd~~~~~~~~~~~~h-------~~~v~~v~  210 (361)
                      ..+.+.+.++.-...+  .+.++|||+.++.+.          .++.|.++|..+++.+..+.--       ......++
T Consensus       106 ~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~  183 (426)
T 3c75_H          106 GSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNA  183 (426)
T ss_dssp             TTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSE
T ss_pred             CCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEE
Confidence            4556667777755566  899999999877775          3678999999999888877521       23456789


Q ss_pred             EecCCCEEEEEEC--CCcEEEEeccccccc
Q psy8430         211 FLPNKDLVLSASG--DKSVHIWQAVINWEC  238 (361)
Q Consensus       211 ~~~~~~~l~s~~~--d~~i~lwd~~~~~~~  238 (361)
                      |+|+|++++.+..  ++.|.+.|+.+.+.+
T Consensus       184 ~spDGk~lyV~n~~~~~~VsVID~~t~kvv  213 (426)
T 3c75_H          184 LTPDNKNLLFYQFSPAPAVGVVDLEGKTFD  213 (426)
T ss_dssp             ECTTSSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred             EcCCCCEEEEEecCCCCeEEEEECCCCeEE
Confidence            9999999988874  578999999887554

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.07  E-value=0.0004  Score=57.88  Aligned_cols=163  Identities=14%  Similarity=-0.007  Sum_probs=101.2

Q ss_pred             eeeeEEeeccC-CCeEEEEEcCCCCEEEEEeCCC--cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEE-ECCCc
Q psy8430         151 CYKIRSFSGHR-DGVWDVAVRPGQPVLGSASADR--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA-SGDKS  226 (361)
Q Consensus       151 ~~~~~~l~~h~-~~V~~l~~~~~~~~l~s~s~d~--~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~-~~d~~  226 (361)
                      .+.++++..-. .....|.|+ ++.++.+++.+|  .|+.+|+.+++.+..+.-. .........++++.+..+ -.++.
T Consensus        31 ~~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~  108 (262)
T 3nol_A           31 YQIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGL  108 (262)
T ss_dssp             EEEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSE
T ss_pred             eEEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCE
Confidence            35556663222 334678898 677888888876  8999999999988887643 333332233345555444 46889


Q ss_pred             EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEE
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  306 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~  306 (361)
                      +.++|..+..                          .+.++.... .-..++  ++++.|+.+..++.|.++|..+.+.+
T Consensus       109 v~v~D~~t~~--------------------------~~~ti~~~~-eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~  159 (262)
T 3nol_A          109 GFVWNIRNLR--------------------------QVRSFNYDG-EGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPV  159 (262)
T ss_dssp             EEEEETTTCC--------------------------EEEEEECSS-CCCCEE--ECSSCEEECCSSSEEEEECTTTCSEE
T ss_pred             EEEEECccCc--------------------------EEEEEECCC-CceEEe--cCCCEEEEECCCCeEEEEcCCCCeEE
Confidence            9999987663                          334443222 223344  47888888777888999999999988


Q ss_pred             EEeecCC--CCC---eEEEEEcCCCc--ccCCCeEEEEcCCCCCCCC
Q psy8430         307 QSLTGHD--EEP---HILCVSSYYSK--VSCDLFQRIQHLDCGTSEN  346 (361)
Q Consensus       307 ~~~~~h~--~~v---~~~~~s~s~~~--v~~dg~i~iW~~d~~~~~~  346 (361)
                      .++....  .++   ..+-+..+.++  +-.+..|.+.  |..|++.
T Consensus       160 ~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vI--Dp~tG~V  204 (262)
T 3nol_A          160 RTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRI--DPETGKV  204 (262)
T ss_dssp             EEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEE--CTTTCBE
T ss_pred             EEEEeccCCccccccceeEEECCEEEEEEccCCeEEEE--ECCCCcE
Confidence            8876532  122   22223332222  1256777777  8755543

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=98.01  E-value=0.0003  Score=67.88  Aligned_cols=173  Identities=9%  Similarity=-0.047  Sum_probs=102.7

Q ss_pred             EEEEEcCCCCEEEEEeCCC-------------------cEEEEeCCCCeEEEEEeC--CC-------CCeEEEEEecCC-
Q psy8430         165 WDVAVRPGQPVLGSASADR-------------------TVRLWSTQTGKCVLQYSG--HS-------GSVNSVRFLPNK-  215 (361)
Q Consensus       165 ~~l~~~~~~~~l~s~s~d~-------------------~i~~wd~~~~~~~~~~~~--h~-------~~v~~v~~~~~~-  215 (361)
                      ..++++|++..++.++.++                   +|..+|..+|+.+..++.  |.       .....+....+| 
T Consensus       246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~  325 (677)
T 1kb0_A          246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGK  325 (677)
T ss_dssp             SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTE
T ss_pred             cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCc
Confidence            3578899888888887664                   599999999998887763  21       122333344467 


Q ss_pred             --CEEEEEECCCcEEEEeccccccccCCCCCCCC-CCCCCCCCCcee------cccccEEEe---CCCCcEEEEEEcCCC
Q psy8430         216 --DLVLSASGDKSVHIWQAVINWECLNNDNDSDL-DESKEPDESSIT------LRTPVKELL---GHSNVVIAADWLSDG  283 (361)
Q Consensus       216 --~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~---~~~~~v~~~~~~~~~  283 (361)
                        ..++.++.+|.+.++|..+++.+......... ............      .......+.   +.. .-..++|+|+.
T Consensus       326 ~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~-~w~~~a~dp~~  404 (677)
T 1kb0_A          326 PRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAH-NWHPMSFNPQT  404 (677)
T ss_dssp             EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSS-CSSCCEEETTT
T ss_pred             EeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCccccc-CCCCceEcCCC
Confidence              67889999999999999988664321110000 000000000000      000000000   111 11257788888


Q ss_pred             CEEEEEeC-------------------------------------------CCcEEEeeCCCCeEEEEeecCCCCCeE--
Q psy8430         284 EQVITASW-------------------------------------------DRVANLFDVETGTILQSLTGHDEEPHI--  318 (361)
Q Consensus       284 ~~l~s~~~-------------------------------------------d~~v~iwd~~~~~~~~~~~~h~~~v~~--  318 (361)
                      .++++...                                           .+.|..||+.+|+.+-.+.........  
T Consensus       405 ~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~  484 (677)
T 1kb0_A          405 GLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTL  484 (677)
T ss_dssp             TEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEE
T ss_pred             CEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcce
Confidence            88877543                                           277999999999988777643211111  


Q ss_pred             -----EEEEcCCCcccCCCeEEEEcCCCCCCC
Q psy8430         319 -----LCVSSYYSKVSCDLFQRIQHLDCGTSE  345 (361)
Q Consensus       319 -----~~~s~s~~~v~~dg~i~iW~~d~~~~~  345 (361)
                           +++.++     .||.+++|  |..|++
T Consensus       485 ~~~g~~v~~g~-----~dg~l~a~--D~~tG~  509 (677)
T 1kb0_A          485 TTAGNVVFQGT-----ADGRLVAY--HAATGE  509 (677)
T ss_dssp             EETTTEEEEEC-----TTSEEEEE--ETTTCC
T ss_pred             EeCCCEEEEEC-----CCCcEEEE--ECCCCc
Confidence                 555566     99999999  875443

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=97.96  E-value=0.00018  Score=69.51  Aligned_cols=119  Identities=14%  Similarity=0.157  Sum_probs=81.4

Q ss_pred             EEcCCC---CEEEEEeCCCcEEEEeCCCCeEEEEEeCCC-----------CCe------------------------EEE
Q psy8430         168 AVRPGQ---PVLGSASADRTVRLWSTQTGKCVLQYSGHS-----------GSV------------------------NSV  209 (361)
Q Consensus       168 ~~~~~~---~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~-----------~~v------------------------~~v  209 (361)
                      ....+|   ..++.++.+|.+.++|..+|+.+..+....           .++                        ..+
T Consensus       319 ~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~  398 (677)
T 1kb0_A          319 DIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPM  398 (677)
T ss_dssp             EEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCC
T ss_pred             ecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCc
Confidence            344467   689999999999999999999887665211           011                        146


Q ss_pred             EEecCCCEEEEEECC-------------------------------------------CcEEEEeccccccccCCCCCCC
Q psy8430         210 RFLPNKDLVLSASGD-------------------------------------------KSVHIWQAVINWECLNNDNDSD  246 (361)
Q Consensus       210 ~~~~~~~~l~s~~~d-------------------------------------------~~i~lwd~~~~~~~~~~~~~~~  246 (361)
                      +|+|++.++++...+                                           |.|..||+.+++.         
T Consensus       399 a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~---------  469 (677)
T 1kb0_A          399 SFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKA---------  469 (677)
T ss_dssp             EEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEE---------
T ss_pred             eEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcE---------
Confidence            888988888776543                                           4555566555421         


Q ss_pred             CCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCC
Q psy8430         247 LDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD  313 (361)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~  313 (361)
                                       .-... +..++.+..+...+..++.++.||.+++||.++|+.+.++....
T Consensus       470 -----------------~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~  518 (677)
T 1kb0_A          470 -----------------AWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT  518 (677)
T ss_dssp             -----------------EEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred             -----------------EeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCC
Confidence                             11111 22233444456678899999999999999999999999887544

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=97.94  E-value=0.0023  Score=52.78  Aligned_cols=161  Identities=11%  Similarity=-0.049  Sum_probs=99.6

Q ss_pred             eeeEEeeccC--CCeEEEEEcCCCCEEEEEeCCC--cEEEEeCCCCeEEEEEeCCCCC-eEEEEEecCCCEEEEEECCCc
Q psy8430         152 YKIRSFSGHR--DGVWDVAVRPGQPVLGSASADR--TVRLWSTQTGKCVLQYSGHSGS-VNSVRFLPNKDLVLSASGDKS  226 (361)
Q Consensus       152 ~~~~~l~~h~--~~V~~l~~~~~~~~l~s~s~d~--~i~~wd~~~~~~~~~~~~h~~~-v~~v~~~~~~~~l~s~~~d~~  226 (361)
                      +.++++ -|.  .....+.|++ +.++.+.+.+|  .|+.+|+.+++.+..+.-.... -..+++. .+++....-.++.
T Consensus        10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~   86 (243)
T 3mbr_X           10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHE   86 (243)
T ss_dssp             EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSE
T ss_pred             EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCE
Confidence            455555 343  4466899987 66777777754  8999999999988887633221 1233443 2344445557899


Q ss_pred             EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEE
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  306 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~  306 (361)
                      +.++|..+..                          .+.++.... .-+.+++  ++..|+.+..++.|.++|..+.+.+
T Consensus        87 v~v~D~~tl~--------------------------~~~ti~~~~-~Gwglt~--dg~~L~vSdgs~~l~~iDp~t~~~~  137 (243)
T 3mbr_X           87 GFVYDLATLT--------------------------PRARFRYPG-EGWALTS--DDSHLYMSDGTAVIRKLDPDTLQQV  137 (243)
T ss_dssp             EEEEETTTTE--------------------------EEEEEECSS-CCCEEEE--CSSCEEEECSSSEEEEECTTTCCEE
T ss_pred             EEEEECCcCc--------------------------EEEEEeCCC-CceEEee--CCCEEEEECCCCeEEEEeCCCCeEE
Confidence            9999987663                          333443222 2244544  7777888788899999999999998


Q ss_pred             EEeecCCC--C---CeEEEEEcCCCc--ccCCCeEEEEcCCCCCCCC
Q psy8430         307 QSLTGHDE--E---PHILCVSSYYSK--VSCDLFQRIQHLDCGTSEN  346 (361)
Q Consensus       307 ~~~~~h~~--~---v~~~~~s~s~~~--v~~dg~i~iW~~d~~~~~~  346 (361)
                      .++.....  +   +..+-+..+.++  +-.+..|.+-  |..|++.
T Consensus       138 ~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vI--Dp~tG~V  182 (243)
T 3mbr_X          138 GSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARI--DPASGKV  182 (243)
T ss_dssp             EEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEE--CTTTCBE
T ss_pred             EEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEE--ECCCCCE
Confidence            88865321  2   222222222111  2246677777  7755443

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=97.90  E-value=0.00086  Score=55.92  Aligned_cols=162  Identities=7%  Similarity=-0.065  Sum_probs=99.9

Q ss_pred             eeeEEeec-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEE
Q psy8430         152 YKIRSFSG-HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  230 (361)
Q Consensus       152 ~~~~~l~~-h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lw  230 (361)
                      +.++++.- -......|.|+. +.++.+.+.+|.|+++|+.+++.+..+-...-.-..+++. .+++.+..-.++.+.+|
T Consensus        44 ~Vv~~~phd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~-g~~Ly~ltw~~~~v~V~  121 (268)
T 3nok_A           44 HIIREYPHATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASD-GERLYQLTWTEGLLFTW  121 (268)
T ss_dssp             EEEEEEECCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEEC-SSCEEEEESSSCEEEEE
T ss_pred             EEEEEEcCCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEe-CCEEEEEEccCCEEEEE
Confidence            44555532 223356788884 6788888899999999999998777662111112334443 23444455578899999


Q ss_pred             eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430         231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~  310 (361)
                      |..+.+                          .+.++... ..-+.+++  +++.|+.+..++.|.++|..+.+.+.++.
T Consensus       122 D~~Tl~--------------------------~~~ti~~~-~eGwGLt~--Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~  172 (268)
T 3nok_A          122 SGMPPQ--------------------------RERTTRYS-GEGWGLCY--WNGKLVRSDGGTMLTFHEPDGFALVGAVQ  172 (268)
T ss_dssp             ETTTTE--------------------------EEEEEECS-SCCCCEEE--ETTEEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred             ECCcCc--------------------------EEEEEeCC-CceeEEec--CCCEEEEECCCCEEEEEcCCCCeEEEEEE
Confidence            987663                          33344322 22244444  78888888889999999999999988886


Q ss_pred             cCC--CCC---eEEEEEcCCCc--ccCCCeEEEEcCCCCCCCC
Q psy8430         311 GHD--EEP---HILCVSSYYSK--VSCDLFQRIQHLDCGTSEN  346 (361)
Q Consensus       311 ~h~--~~v---~~~~~s~s~~~--v~~dg~i~iW~~d~~~~~~  346 (361)
                      ...  ..+   ..+-+..+.++  +-.+..|.+-  |..|++.
T Consensus       173 V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vI--Dp~TG~V  213 (268)
T 3nok_A          173 VKLRGQPVELINELECANGVIYANIWHSSDVLEI--DPATGTV  213 (268)
T ss_dssp             CEETTEECCCEEEEEEETTEEEEEETTCSEEEEE--CTTTCBE
T ss_pred             eCCCCcccccccccEEeCCEEEEEECCCCeEEEE--eCCCCcE
Confidence            532  122   22222222121  1256677777  8755443

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=97.89  E-value=0.00058  Score=66.82  Aligned_cols=114  Identities=13%  Similarity=0.102  Sum_probs=73.8

Q ss_pred             CeEEEEEc-CCCCEEEEEeC-CC----cEEEEeCCCC-eEEE-EEeCCCCCeEEEEEecCCCEEEEEECC-----CcEEE
Q psy8430         163 GVWDVAVR-PGQPVLGSASA-DR----TVRLWSTQTG-KCVL-QYSGHSGSVNSVRFLPNKDLVLSASGD-----KSVHI  229 (361)
Q Consensus       163 ~V~~l~~~-~~~~~l~s~s~-d~----~i~~wd~~~~-~~~~-~~~~h~~~v~~v~~~~~~~~l~s~~~d-----~~i~l  229 (361)
                      .+...+|| |||++|+-+.. +|    +|+++|+.++ +.+. .+.   .....++|+|+++.|+....|     ..|.+
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~  251 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR  251 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence            57789999 99997775433 22    5999999988 6321 111   113467899999887776655     24667


Q ss_pred             EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe-CCCCcEEEEEEcCCCCEEEEEeC---CCcEEEeeCCCC
Q psy8430         230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITASW---DRVANLFDVETG  303 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~---d~~v~iwd~~~~  303 (361)
                      +++.++..                        .....+. .+.....++.|+|||++|+..+.   ...|+++|+.++
T Consensus       252 ~~lgt~~~------------------------~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~  305 (751)
T 2xe4_A          252 HVMGKLQS------------------------EDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG  305 (751)
T ss_dssp             EETTSCGG------------------------GCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred             EECCCCch------------------------hcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence            77654311                        0111222 22345678899999999887653   345888899875

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=97.86  E-value=0.00045  Score=66.79  Aligned_cols=36  Identities=19%  Similarity=0.189  Sum_probs=30.7

Q ss_pred             EEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCC
Q psy8430         278 DWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD  313 (361)
Q Consensus       278 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~  313 (361)
                      .+...+..++.++.|+.++.||.++|+.+..+....
T Consensus       481 ~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~  516 (689)
T 1yiq_A          481 TLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAAS  516 (689)
T ss_dssp             EEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred             cceECCCEEEEECCCCcEEEEECCCCccceeeeCCC
Confidence            455578899999999999999999999998887543

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=97.81  E-value=0.00023  Score=63.18  Aligned_cols=96  Identities=13%  Similarity=-0.041  Sum_probs=72.6

Q ss_pred             cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE----------CCCcEEEEeccccccccCCCCCCCCCCCCCC
Q psy8430         184 TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS----------GDKSVHIWQAVINWECLNNDNDSDLDESKEP  253 (361)
Q Consensus       184 ~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~----------~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~  253 (361)
                      +|.+.|..+++.+.++..-..+  .+.++|+++.++.+.          .++.|.+||+.+..                 
T Consensus        47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~-----------------  107 (368)
T 1mda_H           47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL-----------------  107 (368)
T ss_dssp             EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC-----------------
T ss_pred             eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC-----------------
Confidence            8889999999999998754455  799999999888876          36889999998763                 


Q ss_pred             CCCceecccccEEEeCC-------CCcEEEEEEcCCCCEEEEEeC--CCcEEE--eeCCCCeEEEEee
Q psy8430         254 DESSITLRTPVKELLGH-------SNVVIAADWLSDGEQVITASW--DRVANL--FDVETGTILQSLT  310 (361)
Q Consensus       254 ~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~s~~~--d~~v~i--wd~~~~~~~~~~~  310 (361)
                               .+..+...       ......++++|+|++++.+..  +..+.+  +|..+   +.++.
T Consensus       108 ---------vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~  163 (368)
T 1mda_H          108 ---------PIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTK  163 (368)
T ss_dssp             ---------EEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEE
T ss_pred             ---------EEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEE
Confidence                     33444322       123456889999999999875  467888  99987   45553

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=97.79  E-value=0.0012  Score=59.46  Aligned_cols=141  Identities=15%  Similarity=0.145  Sum_probs=91.9

Q ss_pred             cceeeeEEeeccC---CCeEEEEEcCCCCEEEEEe-------------------CCCcEEEEeCCCCeEEEEEeCC--CC
Q psy8430         149 LSCYKIRSFSGHR---DGVWDVAVRPGQPVLGSAS-------------------ADRTVRLWSTQTGKCVLQYSGH--SG  204 (361)
Q Consensus       149 ~~~~~~~~l~~h~---~~V~~l~~~~~~~~l~s~s-------------------~d~~i~~wd~~~~~~~~~~~~h--~~  204 (361)
                      .+.+.+.++....   .--+.+.|+|+++.++++.                   .+.+|.+||+.+++.+.++.--  ..
T Consensus       172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~  251 (462)
T 2ece_A          172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR  251 (462)
T ss_dssp             TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred             CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence            4556666665222   2234588899999888884                   3689999999999888887742  23


Q ss_pred             CeEEEEE--ecCCCEEEEEE------CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceeccc----ccEEEeC---
Q psy8430         205 SVNSVRF--LPNKDLVLSAS------GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRT----PVKELLG---  269 (361)
Q Consensus       205 ~v~~v~~--~~~~~~l~s~~------~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---  269 (361)
                      ....+.|  +|+++++..++      .+++|.+|....+.                     +...+    +.....+   
T Consensus       252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~---------------------~~~~~vIdi~~~~v~~~lp  310 (462)
T 2ece_A          252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK---------------------WNAEKVIEIPAEPLEGNLP  310 (462)
T ss_dssp             EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE---------------------EEEEEEEEECCEECCSSCC
T ss_pred             ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc---------------------eeEEEEEeCCCcccccccc
Confidence            4556666  99999876655      66788877654221                     00000    0000000   


Q ss_pred             --------CCCcEEEEEEcCCCCEEEEEeC-CCcEEEeeCC---CCeEEEEee
Q psy8430         270 --------HSNVVIAADWLSDGEQVITASW-DRVANLFDVE---TGTILQSLT  310 (361)
Q Consensus       270 --------~~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd~~---~~~~~~~~~  310 (361)
                              -......+.++|||++|+++.. .+.|.+||+.   +.+.+..+.
T Consensus       311 ~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~  363 (462)
T 2ece_A          311 EILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVK  363 (462)
T ss_dssp             GGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEE
T ss_pred             ccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEE
Confidence                    0235678899999999988776 5789999985   345555554

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=97.74  E-value=0.0022  Score=56.89  Aligned_cols=137  Identities=9%  Similarity=-0.054  Sum_probs=87.4

Q ss_pred             CCEEEEEeCCCcEEEEeCCCCeEEEEEeCC---------CCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCC
Q psy8430         173 QPVLGSASADRTVRLWSTQTGKCVLQYSGH---------SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDN  243 (361)
Q Consensus       173 ~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h---------~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~  243 (361)
                      +..++.++.++.|..+|..+|+.+..+...         ...+.+. ...++..++.++.++.|..+|..+++...    
T Consensus        53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W----  127 (376)
T 3q7m_A           53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAW----  127 (376)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEE----
T ss_pred             CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEE----
Confidence            557888888999999999999887766542         1222221 22246678888899999999998774321    


Q ss_pred             CCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCC--------
Q psy8430         244 DSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE--------  315 (361)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~--------  315 (361)
                                            ..............  .+..++.++.++.|..+|..+|+.+..+......        
T Consensus       128 ----------------------~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~  183 (376)
T 3q7m_A          128 ----------------------QTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESA  183 (376)
T ss_dssp             ----------------------EEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCC
T ss_pred             ----------------------EEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCC
Confidence                                  11111111111112  2457888889999999999999988776543221        


Q ss_pred             -CeE--EEEEcCCCcccCCCeEEEEcCCCCCCC
Q psy8430         316 -PHI--LCVSSYYSKVSCDLFQRIQHLDCGTSE  345 (361)
Q Consensus       316 -v~~--~~~s~s~~~v~~dg~i~iW~~d~~~~~  345 (361)
                       +..  .++.+.     .+|.|..+  |..+++
T Consensus       184 ~~~~~~~v~~g~-----~~g~l~~~--d~~tG~  209 (376)
T 3q7m_A          184 PTTAFGAAVVGG-----DNGRVSAV--LMEQGQ  209 (376)
T ss_dssp             CEEETTEEEECC-----TTTEEEEE--ETTTCC
T ss_pred             cEEECCEEEEEc-----CCCEEEEE--ECCCCc
Confidence             111  445555     78888888  664443

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=97.74  E-value=0.0084  Score=54.02  Aligned_cols=141  Identities=10%  Similarity=0.016  Sum_probs=92.5

Q ss_pred             ccceeEEeeecC--ccceeeeEEee-------ccCCCeEEEEEcCCCCEEEEEeCC------CcEEEEeCCCCeEEEEEe
Q psy8430         136 QTSKIVSSFKTS--LLSCYKIRSFS-------GHRDGVWDVAVRPGQPVLGSASAD------RTVRLWSTQTGKCVLQYS  200 (361)
Q Consensus       136 ~~~~~~~~~~~~--~~~~~~~~~l~-------~h~~~V~~l~~~~~~~~l~s~s~d------~~i~~wd~~~~~~~~~~~  200 (361)
                      ..+..+.++...  ....+.++++.       .....-..+...|+| +++++..+      +.|.+.|..+++.+..+.
T Consensus       103 l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~  181 (462)
T 2ece_A          103 LRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWE  181 (462)
T ss_dssp             TTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECC
T ss_pred             CCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEc
Confidence            333444555543  33456666663       111234567788999 77777666      789999999999999987


Q ss_pred             CCC---CCeEEEEEecCCCEEEEEE-------------------CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCce
Q psy8430         201 GHS---GSVNSVRFLPNKDLVLSAS-------------------GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSI  258 (361)
Q Consensus       201 ~h~---~~v~~v~~~~~~~~l~s~~-------------------~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (361)
                      .-.   ..-..+-|+|+++.+++..                   .+.+|.+||+.+++                      
T Consensus       182 ~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k----------------------  239 (462)
T 2ece_A          182 IDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK----------------------  239 (462)
T ss_dssp             SBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE----------------------
T ss_pred             cCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc----------------------
Confidence            221   2244688899999888874                   36899999987542                      


Q ss_pred             ecccccEEEeCC--CCcEEEEEE--cCCCCEEEEEeC------CCcEEEeeCCCC
Q psy8430         259 TLRTPVKELLGH--SNVVIAADW--LSDGEQVITASW------DRVANLFDVETG  303 (361)
Q Consensus       259 ~~~~~~~~~~~~--~~~v~~~~~--~~~~~~l~s~~~------d~~v~iwd~~~~  303 (361)
                          ....+...  ......+.|  +|++++++.++.      +++|.+|....|
T Consensus       240 ----~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g  290 (462)
T 2ece_A          240 ----RIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDG  290 (462)
T ss_dssp             ----EEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETT
T ss_pred             ----EeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCC
Confidence                23334321  123444555  999999988874      567877665544

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=97.66  E-value=0.0022  Score=55.50  Aligned_cols=153  Identities=10%  Similarity=-0.023  Sum_probs=92.5

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEE
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  230 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lw  230 (361)
                      ++....+..+...+.++...+++. +..++.++.|..||.. ++.+..+......+.++...+++.+++..   +.+..+
T Consensus       126 g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~  200 (330)
T 3hxj_A          126 GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAI  200 (330)
T ss_dssp             SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEE
T ss_pred             CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEE
Confidence            334444444555667777887776 5557778999999998 87777776566677778787777765544   788888


Q ss_pred             eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430         231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~  310 (361)
                      | .++.                          ...........+.++...++|. +..++.++.+..+|. ++..+..+.
T Consensus       201 d-~~g~--------------------------~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~  251 (330)
T 3hxj_A          201 N-PDGT--------------------------EKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFK  251 (330)
T ss_dssp             C-TTSC--------------------------EEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEE
T ss_pred             C-CCCc--------------------------EEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEee
Confidence            8 4432                          1222222334566677777664 555666777888874 566665555


Q ss_pred             cCCCCCeEEEEE-cCCCcc-cCCCeEEEE
Q psy8430         311 GHDEEPHILCVS-SYYSKV-SCDLFQRIQ  337 (361)
Q Consensus       311 ~h~~~v~~~~~s-~s~~~v-~~dg~i~iW  337 (361)
                      .....+...++. .+.+.+ +.+|.|..+
T Consensus       252 ~~~~~~~~~~~~~~g~l~v~t~~ggl~~~  280 (330)
T 3hxj_A          252 TGKRIESSPVIGNTDTIYFGSYDGHLYAI  280 (330)
T ss_dssp             CSSCCCSCCEECTTSCEEEECTTCEEEEE
T ss_pred             CCCCccccceEcCCCeEEEecCCCCEEEE
Confidence            433332222221 111121 156677777

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=97.64  E-value=0.0092  Score=52.80  Aligned_cols=114  Identities=12%  Similarity=0.033  Sum_probs=72.1

Q ss_pred             CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCC
Q psy8430         172 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESK  251 (361)
Q Consensus       172 ~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~  251 (361)
                      ++..++.++.++.|..+|..+|+.+..+............  .+..++.++.++.+..+|..++........        
T Consensus       102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~--------  171 (376)
T 3q7m_A          102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNL--------  171 (376)
T ss_dssp             ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEEC--------
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeC--------
Confidence            3557888889999999999999987776643322222222  245777888999999999987743211000        


Q ss_pred             CCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430         252 EPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~  310 (361)
                               ..+.........++    .  .+..++.++.++.+..+|..+|+.+-...
T Consensus       172 ---------~~~~~~~~~~~~~~----~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~  215 (376)
T 3q7m_A          172 ---------DMPSLSLRGESAPT----T--AFGAAVVGGDNGRVSAVLMEQGQMIWQQR  215 (376)
T ss_dssp             ---------CC-----CCCCCCE----E--ETTEEEECCTTTEEEEEETTTCCEEEEEE
T ss_pred             ---------CCCceeecCCCCcE----E--ECCEEEEEcCCCEEEEEECCCCcEEEEEe
Confidence                     00000111111222    2  24578888889999999999998876665

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=97.63  E-value=0.0019  Score=55.86  Aligned_cols=148  Identities=7%  Similarity=-0.115  Sum_probs=93.9

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEE
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  230 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lw  230 (361)
                      ++.+..+......+.++.+.+++.+++.+   +.+..|| .+++.+..+......+.++...+++. +..++.++.+..+
T Consensus       166 g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~  240 (330)
T 3hxj_A          166 GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAI  240 (330)
T ss_dssp             SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEE
T ss_pred             CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEE
Confidence            44444555555667788888888755544   7899999 77777777665666788888887765 4456677788888


Q ss_pred             eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430         231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~  310 (361)
                      |....                           ....+......+.++.+.+++ .++.++.+|.+..+|. +++.+..+.
T Consensus       241 ~~~g~---------------------------~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~  291 (330)
T 3hxj_A          241 NPDGT---------------------------EKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFE  291 (330)
T ss_dssp             CTTSC---------------------------EEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEE
T ss_pred             CCCCC---------------------------EeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEE
Confidence            74221                           122222222233344555455 5677888888999996 677777665


Q ss_pred             cCCCCCeEE-------EEEcCCCcccCCCeEEEE
Q psy8430         311 GHDEEPHIL-------CVSSYYSKVSCDLFQRIQ  337 (361)
Q Consensus       311 ~h~~~v~~~-------~~s~s~~~v~~dg~i~iW  337 (361)
                      .....+.++       ++.++     .+|.+++.
T Consensus       292 ~~~~~~~~~~~d~~g~l~~gt-----~~G~~~~~  320 (330)
T 3hxj_A          292 TGSWIIATPVIDENGTIYFGT-----RNGKFYAL  320 (330)
T ss_dssp             CSSCCCSCCEECTTCCEEEEC-----TTSCEEEE
T ss_pred             cCCccccceEEcCCCEEEEEc-----CCCeEEEE
Confidence            444444442       33344     67777776

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=97.63  E-value=0.016  Score=48.59  Aligned_cols=148  Identities=9%  Similarity=-0.045  Sum_probs=87.7

Q ss_pred             CCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCE-EEEEECCCcEEEEecccccccc
Q psy8430         162 DGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL-VLSASGDKSVHIWQAVINWECL  239 (361)
Q Consensus       162 ~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~~~d~~i~lwd~~~~~~~~  239 (361)
                      ..+..++|++++. ++++-..++.|..++...+.....+.........++++|++.. +++-...+.|.++++....   
T Consensus        36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~---  112 (267)
T 1npe_A           36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ---  112 (267)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---
T ss_pred             CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC---
Confidence            3577899999655 4445556789999999765543333333357899999997555 4455556789998875321   


Q ss_pred             CCCCCCCCCCCCCCCCCceecccccEEEe-CCCCcEEEEEEcCCCCEEEEEeCC---CcEEEeeCCCCeEEEEee-cCCC
Q psy8430         240 NNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITASWD---RVANLFDVETGTILQSLT-GHDE  314 (361)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d---~~v~iwd~~~~~~~~~~~-~h~~  314 (361)
                                              ...+. ........++++|++..|+.+...   +.|..+++. +.....+. ..-.
T Consensus       113 ------------------------~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d-g~~~~~~~~~~~~  167 (267)
T 1npe_A          113 ------------------------RRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD-GTNRRILAQDNLG  167 (267)
T ss_dssp             ------------------------CEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT-SCCCEEEECTTCS
T ss_pred             ------------------------EEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC-CCCcEEEEECCCC
Confidence                                    11111 122456889999976766665543   678888875 33333332 1112


Q ss_pred             CCeEEEEEcC--CCcc--cCCCeEEEE
Q psy8430         315 EPHILCVSSY--YSKV--SCDLFQRIQ  337 (361)
Q Consensus       315 ~v~~~~~s~s--~~~v--~~dg~i~iW  337 (361)
                      ....+.++..  .+++  ...+.|.++
T Consensus       168 ~P~gia~d~~~~~lyv~d~~~~~I~~~  194 (267)
T 1npe_A          168 LPNGLTFDAFSSQLCWVDAGTHRAECL  194 (267)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             CCcEEEEcCCCCEEEEEECCCCEEEEE
Confidence            2333444432  2222  255677777

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=97.53  E-value=0.029  Score=46.89  Aligned_cols=151  Identities=7%  Similarity=-0.086  Sum_probs=89.2

Q ss_pred             CCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC---CCcEEEEecccccc
Q psy8430         162 DGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG---DKSVHIWQAVINWE  237 (361)
Q Consensus       162 ~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~---d~~i~lwd~~~~~~  237 (361)
                      .....+++++++. ++++-...+.|.+++...................++++|++..+..+..   .+.|..+++...  
T Consensus        79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~--  156 (267)
T 1npe_A           79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT--  156 (267)
T ss_dssp             CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC--
T ss_pred             CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC--
Confidence            5678999999655 4555556789999998644322222222356789999996555544443   367877776422  


Q ss_pred             ccCCCCCCCCCCCCCCCCCceecccccEEEe-CCCCcEEEEEEcCCCCEEEEEe-CCCcEEEeeCCCCeEEEEeecCCCC
Q psy8430         238 CLNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTGHDEE  315 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~h~~~  315 (361)
                                               ....+. ........++++|++.+|+.+. ..+.|.++|.........+... ..
T Consensus       157 -------------------------~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~-~~  210 (267)
T 1npe_A          157 -------------------------NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGL-QY  210 (267)
T ss_dssp             -------------------------CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECC-CS
T ss_pred             -------------------------CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCC-CC
Confidence                                     111111 2234678899999877776555 4578999999854433333321 11


Q ss_pred             CeEEEEEcCCCccc--CCCeEEEEcCCCC
Q psy8430         316 PHILCVSSYYSKVS--CDLFQRIQHLDCG  342 (361)
Q Consensus       316 v~~~~~s~s~~~v~--~dg~i~iW~~d~~  342 (361)
                      ...+.+.+..++|+  ..+.|.++  |..
T Consensus       211 P~gi~~d~~~lyva~~~~~~v~~~--d~~  237 (267)
T 1npe_A          211 PFAVTSYGKNLYYTDWKTNSVIAM--DLA  237 (267)
T ss_dssp             EEEEEEETTEEEEEETTTTEEEEE--ETT
T ss_pred             ceEEEEeCCEEEEEECCCCeEEEE--eCC
Confidence            22333333333332  56788888  663

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=97.51  E-value=0.0038  Score=60.15  Aligned_cols=73  Identities=11%  Similarity=0.112  Sum_probs=54.3

Q ss_pred             EEEEcCCCCEEEEEeCCC-------------------cEEEEeCCCCeEEEEEeC--CC-------CCeEEEEEecCCC-
Q psy8430         166 DVAVRPGQPVLGSASADR-------------------TVRLWSTQTGKCVLQYSG--HS-------GSVNSVRFLPNKD-  216 (361)
Q Consensus       166 ~l~~~~~~~~l~s~s~d~-------------------~i~~wd~~~~~~~~~~~~--h~-------~~v~~v~~~~~~~-  216 (361)
                      .++++|+...++.++.++                   .|..+|..+|+.+..++.  |.       .++....+..+++ 
T Consensus       234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~  313 (668)
T 1kv9_A          234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP  313 (668)
T ss_dssp             CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred             ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence            478888888888887766                   399999999998888764  22       2233333334665 


Q ss_pred             --EEEEEECCCcEEEEeccccccc
Q psy8430         217 --LVLSASGDKSVHIWQAVINWEC  238 (361)
Q Consensus       217 --~l~s~~~d~~i~lwd~~~~~~~  238 (361)
                        .++.++.+|.+.++|..+++.+
T Consensus       314 ~~~v~~~~~~G~l~~lD~~tG~~l  337 (668)
T 1kv9_A          314 RKVLMQAPKNGFFYVLDRTNGKLI  337 (668)
T ss_dssp             EEEEEECCTTSEEEEEETTTCCEE
T ss_pred             EEEEEEECCCCEEEEEECCCCCEe
Confidence              6888999999999999988765

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=97.42  E-value=0.01  Score=55.36  Aligned_cols=191  Identities=9%  Similarity=0.058  Sum_probs=108.6

Q ss_pred             EEeeecCccceeeeEEeeccCCCeEEEEE-c-CCCCEEEEEe------------------CCCcEEEEeCCCCeEEEEEe
Q psy8430         141 VSSFKTSLLSCYKIRSFSGHRDGVWDVAV-R-PGQPVLGSAS------------------ADRTVRLWSTQTGKCVLQYS  200 (361)
Q Consensus       141 ~~~~~~~~~~~~~~~~l~~h~~~V~~l~~-~-~~~~~l~s~s------------------~d~~i~~wd~~~~~~~~~~~  200 (361)
                      +...+.....+..+-++..- .....+++ + |++.++++++                  .++.+.+.|..+.+...++.
T Consensus       114 VavIdl~t~~~~~ii~ip~g-~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~  192 (595)
T 1fwx_A          114 VARVRCDVMKCDAILEIPNA-KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVL  192 (595)
T ss_dssp             EEEEETTTTEEEEEEECSSC-CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEE
T ss_pred             EEEEECCCceEeeEEeCCCC-CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEE
Confidence            33444444333333344322 34778887 5 8999988885                  24579999999998888877


Q ss_pred             CCCCCeEEEEEecCCCEEEEEECCC---------------cEEEEeccccccccCCCCCCCCCCCCCCCCCceeccc---
Q psy8430         201 GHSGSVNSVRFLPNKDLVLSASGDK---------------SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRT---  262 (361)
Q Consensus       201 ~h~~~v~~v~~~~~~~~l~s~~~d~---------------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  262 (361)
                      -- +....++++|+|+++++.+.+.               .|.+.|+...............     .........+   
T Consensus       193 Vg-g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i-----~~V~VID~~~~~~  266 (595)
T 1fwx_A          193 VS-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL-----NGVKVVDGRKEAS  266 (595)
T ss_dssp             ES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE-----TTEEEEECSGGGC
T ss_pred             eC-CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE-----CcEEEEeCcccCC
Confidence            32 2456788999999999888663               4677776544321111000000     0000111111   


Q ss_pred             -c-cEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEeeCCCCe------------EEEEeecCCCCCeEEEEEcCC-C
Q psy8430         263 -P-VKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGT------------ILQSLTGHDEEPHILCVSSYY-S  326 (361)
Q Consensus       263 -~-~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~------------~~~~~~~h~~~v~~~~~s~s~-~  326 (361)
                       . +..+.. .....++.++|||+++++++ .+.+|.++|+.+.+            .+..+..-.+ ...+.+++.+ +
T Consensus       267 ~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~g-P~h~aF~~dG~a  344 (595)
T 1fwx_A          267 SLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLG-PLHTAFDGRGNA  344 (595)
T ss_dssp             CSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSC-EEEEEECTTSEE
T ss_pred             ceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCC-cceEEECCCCeE
Confidence             1 122211 22445688999999887766 57889999999653            3333332222 2224455432 1


Q ss_pred             c--ccCCCeEEEEcCC
Q psy8430         327 K--VSCDLFQRIQHLD  340 (361)
Q Consensus       327 ~--v~~dg~i~iW~~d  340 (361)
                      +  .--|+.|.+||++
T Consensus       345 Y~t~~ldsqV~kwdi~  360 (595)
T 1fwx_A          345 YTSLFLDSQVVKWNIE  360 (595)
T ss_dssp             EEEETTTTEEEEEEHH
T ss_pred             EEEEecCCcEEEEEhh
Confidence            1  2378999999433

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=97.40  E-value=0.028  Score=48.51  Aligned_cols=154  Identities=10%  Similarity=-0.051  Sum_probs=89.9

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeC--------------------CCCCeEEEEEec-CCCE
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG--------------------HSGSVNSVRFLP-NKDL  217 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~--------------------h~~~v~~v~~~~-~~~~  217 (361)
                      +.-....+++|+++|+++.++..++.|..|+..++... .+..                    ....+..+++.+ +++ 
T Consensus        16 g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-   93 (322)
T 2fp8_A           16 APSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-   93 (322)
T ss_dssp             CSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-
T ss_pred             CccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc-
Confidence            33344667899999987888888999999998765432 2321                    013578999998 554 


Q ss_pred             EEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC-CCCcEEEEEEcC-CCCEEEEEeC----
Q psy8430         218 VLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLS-DGEQVITASW----  291 (361)
Q Consensus       218 l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~-~~~~l~s~~~----  291 (361)
                      |+.+...+.+..+|..++...                       .......+ .......+++.+ +|...++-..    
T Consensus        94 l~v~d~~~~i~~~d~~~g~~~-----------------------~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~  150 (322)
T 2fp8_A           94 LYIVDCYYHLSVVGSEGGHAT-----------------------QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYD  150 (322)
T ss_dssp             EEEEETTTEEEEECTTCEECE-----------------------EEESEETTEECSCEEEEEECTTTCCEEEEESCSSCC
T ss_pred             EEEEECCCCEEEEeCCCCEEE-----------------------EecccCCCCcccccceEEEecCCCEEEEECCccccc
Confidence            445545555888876543110                       00000111 123467899999 8987776533    


Q ss_pred             -------------CCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCC--Cccc--CCCeEEEEc
Q psy8430         292 -------------DRVANLFDVETGTILQSLTGHDEEPHILCVSSYY--SKVS--CDLFQRIQH  338 (361)
Q Consensus       292 -------------d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~--~~v~--~dg~i~iW~  338 (361)
                                   ++.|..||..+++.......- .....+.++...  ++|+  .++.|.+|+
T Consensus       151 ~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~-~~p~gia~~~dg~~lyv~d~~~~~I~~~~  213 (322)
T 2fp8_A          151 DRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKEL-HVPGGAEVSADSSFVLVAEFLSHQIVKYW  213 (322)
T ss_dssp             TTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEE-SCCCEEEECTTSSEEEEEEGGGTEEEEEE
T ss_pred             ccccceehcccCCCceEEEEeCCCCEEEEeccCC-ccCcceEECCCCCEEEEEeCCCCeEEEEE
Confidence                         367888998877643322211 122234444331  2332  457788883

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=97.40  E-value=0.01  Score=49.73  Aligned_cols=132  Identities=6%  Similarity=-0.044  Sum_probs=84.1

Q ss_pred             ceeeeEEeec-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEE
Q psy8430         150 SCYKIRSFSG-HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  228 (361)
Q Consensus       150 ~~~~~~~l~~-h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~  228 (361)
                      +++.++++.- .......+++.. +.+.++.-.++.+.++|..+.+.+.++..-...  ...++++++.++.+..++.|.
T Consensus        53 tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~  129 (266)
T 2iwa_A           53 TGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILY  129 (266)
T ss_dssp             TCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEE
T ss_pred             CCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEE
Confidence            3444555431 112223455553 335555556889999999999999888632122  233556788777777788999


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC--C---CCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG--H---SNVVIAADWLSDGEQVITASWDRVANLFDVETG  303 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~  303 (361)
                      ++|..+...                          ...+..  +   -..++.+.|. +|...+..-.++.|.+.|..++
T Consensus       130 viD~~t~~v--------------------------~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg  182 (266)
T 2iwa_A          130 EIDPHTFKL--------------------------IKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDG  182 (266)
T ss_dssp             EECTTTCCE--------------------------EEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTC
T ss_pred             EEECCCCcE--------------------------EEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCC
Confidence            999876522                          222221  1   1246778887 6754444445789999999999


Q ss_pred             eEEEEeec
Q psy8430         304 TILQSLTG  311 (361)
Q Consensus       304 ~~~~~~~~  311 (361)
                      +.+.++..
T Consensus       183 ~V~~~I~~  190 (266)
T 2iwa_A          183 TLLGWILL  190 (266)
T ss_dssp             CEEEEEEC
T ss_pred             cEEEEEEC
Confidence            99998863

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=97.24  E-value=0.0038  Score=58.23  Aligned_cols=146  Identities=10%  Similarity=0.004  Sum_probs=91.6

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCC--------------------------------------cEEEEeCCC-
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADR--------------------------------------TVRLWSTQT-  192 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~--------------------------------------~i~~wd~~~-  192 (361)
                      +.+.++.--. .-..++++|+|.++++++.+.                                      .|.+.|..+ 
T Consensus       186 ~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~  264 (595)
T 1fwx_A          186 EVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKE  264 (595)
T ss_dssp             EEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGG
T ss_pred             eEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCccc
Confidence            4444444211 335577999999988888653                                      366667666 


Q ss_pred             -CeE-EEEEeCCCCCeEEEEEecCCCEEEEEE-CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC
Q psy8430         193 -GKC-VLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG  269 (361)
Q Consensus       193 -~~~-~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (361)
                       ++. +..+. -.....++.++|||++++.++ .+.+|.++|+.+........               ......+..-..
T Consensus       265 ~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~---------------l~~~~~v~~~v~  328 (595)
T 1fwx_A          265 ASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYEN---------------ADPRSAVVAEPE  328 (595)
T ss_dssp             GCCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSC---------------CCGGGGEEECCB
T ss_pred             CCceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccc---------------cCcccceEEEcC
Confidence             444 44444 234667899999999876655 57899999998543210000               001111212222


Q ss_pred             CCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC----------CeEEEEeecCCC
Q psy8430         270 HSNVVIAADWLSDGEQVITASWDRVANLFDVET----------GTILQSLTGHDE  314 (361)
Q Consensus       270 ~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~----------~~~~~~~~~h~~  314 (361)
                      -......++|+|+|...++.--|+.|.+||+.+          .+.+.++..|-.
T Consensus       329 vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yq  383 (595)
T 1fwx_A          329 LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQ  383 (595)
T ss_dssp             CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSC
T ss_pred             CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccc
Confidence            345678899999994334556689999999987          567777776643

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=97.22  E-value=0.027  Score=48.65  Aligned_cols=149  Identities=13%  Similarity=0.008  Sum_probs=90.9

Q ss_pred             CCeEEEEEcC-CCCEEEEEeC-----------------CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEE-E
Q psy8430         162 DGVWDVAVRP-GQPVLGSASA-----------------DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA-S  222 (361)
Q Consensus       162 ~~V~~l~~~~-~~~~l~s~s~-----------------d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~-~  222 (361)
                      .....+++++ +|.+.++-..                 ++.|..||..+++...... .......|+|+|+++.++.+ .
T Consensus       126 ~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~  204 (322)
T 2fp8_A          126 KWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEF  204 (322)
T ss_dssp             SCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEG
T ss_pred             cccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeC
Confidence            3478899999 9987776533                 3678888987776433222 22345679999999865544 5


Q ss_pred             CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC----------C
Q psy8430         223 GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW----------D  292 (361)
Q Consensus       223 ~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~----------d  292 (361)
                      .++.|..|++.....                       . ....+....+ ...++++++|.+.++...          .
T Consensus       205 ~~~~I~~~~~~~~~~-----------------------~-~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~  259 (322)
T 2fp8_A          205 LSHQIVKYWLEGPKK-----------------------G-TAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVD  259 (322)
T ss_dssp             GGTEEEEEESSSTTT-----------------------T-CEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEE
T ss_pred             CCCeEEEEECCCCcC-----------------------C-ccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCc
Confidence            568899998763210                       0 0111111122 678899999987776654          4


Q ss_pred             CcEEEeeCCCCeEEEEeecCCC----CCeEEEEEcCCCccc--CCCeEEEE
Q psy8430         293 RVANLFDVETGTILQSLTGHDE----EPHILCVSSYYSKVS--CDLFQRIQ  337 (361)
Q Consensus       293 ~~v~iwd~~~~~~~~~~~~h~~----~v~~~~~s~s~~~v~--~dg~i~iW  337 (361)
                      +.|..+|.. |+.+..+....+    .+..++...+.++|+  .++.|..+
T Consensus       260 ~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~  309 (322)
T 2fp8_A          260 PKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGIL  309 (322)
T ss_dssp             EEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEE
T ss_pred             cEEEEECCC-CCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEE
Confidence            668888874 787777765432    233333322222222  56667777

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=97.16  E-value=0.0085  Score=57.68  Aligned_cols=35  Identities=11%  Similarity=0.225  Sum_probs=29.5

Q ss_pred             EcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCC
Q psy8430         279 WLSDGEQVITASWDRVANLFDVETGTILQSLTGHD  313 (361)
Q Consensus       279 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~  313 (361)
                      +...+.+++.++.|+.++.||.++|+.+..+....
T Consensus       465 ~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~  499 (668)
T 1kv9_A          465 LSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQS  499 (668)
T ss_dssp             EEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred             eEeCCCEEEEECCcccchhhhhhcChhheEecCCC
Confidence            34468899999999999999999999998886543

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=97.13  E-value=0.027  Score=46.82  Aligned_cols=115  Identities=10%  Similarity=0.005  Sum_probs=72.5

Q ss_pred             EEEEEeCCCCC--eEEEEEecCCCEEEEEECCC--cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCC
Q psy8430         195 CVLQYSGHSGS--VNSVRFLPNKDLVLSASGDK--SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGH  270 (361)
Q Consensus       195 ~~~~~~~h~~~--v~~v~~~~~~~~l~s~~~d~--~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (361)
                      .+.++. |...  ...+.|+ ++.++.+.+.+|  .|+.+|+.+++.                          ...+...
T Consensus        33 vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv--------------------------~~~~~l~   84 (262)
T 3nol_A           33 IVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKT--------------------------LQQIELG   84 (262)
T ss_dssp             EEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCE--------------------------EEEEECC
T ss_pred             EEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcE--------------------------EEEEecC
Confidence            456665 6554  4889998 677777777766  899999987743                          2222222


Q ss_pred             C-CcEEEEEEcCCCCEEEEEe-CCCcEEEeeCCCCeEEEEeecCCCCCeE-----EEEEcCCCcccCCCeEEEEcCCCCC
Q psy8430         271 S-NVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTGHDEEPHI-----LCVSSYYSKVSCDLFQRIQHLDCGT  343 (361)
Q Consensus       271 ~-~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~h~~~v~~-----~~~s~s~~~v~~dg~i~iW~~d~~~  343 (361)
                      . ...-.+++  ++..|+... .++.+.+||..+++.+.++.........     .++..+     .++.|.++  |..|
T Consensus        85 ~~~FgeGit~--~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~glt~dg~~L~~Sd-----Gs~~i~~i--Dp~T  155 (262)
T 3nol_A           85 KRYFGEGISD--WKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGWGLTHNDQYLIMSD-----GTPVLRFL--DPES  155 (262)
T ss_dssp             TTCCEEEEEE--ETTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCCEEECSSCEEECC-----SSSEEEEE--CTTT
T ss_pred             CccceeEEEE--eCCEEEEEEeeCCEEEEEECccCcEEEEEECCCCceEEecCCCEEEEEC-----CCCeEEEE--cCCC
Confidence            1 12233444  455666555 4788999999999999998753322111     233334     56778888  8866


Q ss_pred             CCC
Q psy8430         344 SEN  346 (361)
Q Consensus       344 ~~~  346 (361)
                      .+.
T Consensus       156 ~~v  158 (262)
T 3nol_A          156 LTP  158 (262)
T ss_dssp             CSE
T ss_pred             CeE
Confidence            443

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=97.13  E-value=0.042  Score=51.73  Aligned_cols=72  Identities=15%  Similarity=0.030  Sum_probs=48.0

Q ss_pred             EEEcCCCCEEEEEeCC----------------CcEEEEeCCCCeEEEEEeC--CC--------CCeEEEEEecCCC---E
Q psy8430         167 VAVRPGQPVLGSASAD----------------RTVRLWSTQTGKCVLQYSG--HS--------GSVNSVRFLPNKD---L  217 (361)
Q Consensus       167 l~~~~~~~~l~s~s~d----------------~~i~~wd~~~~~~~~~~~~--h~--------~~v~~v~~~~~~~---~  217 (361)
                      +++++....++.+..+                +.|..+|..+|+.+-.++.  |.        .++. +...++|+   .
T Consensus       240 ~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~  318 (571)
T 2ad6_A          240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPL  318 (571)
T ss_dssp             CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEE
T ss_pred             EEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEE
Confidence            5677766666655532                3599999999998877763  21        1222 22224674   5


Q ss_pred             EEEEECCCcEEEEecccccccc
Q psy8430         218 VLSASGDKSVHIWQAVINWECL  239 (361)
Q Consensus       218 l~s~~~d~~i~lwd~~~~~~~~  239 (361)
                      ++.++.+|.+.++|..+++.+.
T Consensus       319 v~~~~~~G~l~~lD~~tG~~~w  340 (571)
T 2ad6_A          319 LSHIDRNGILYTLNRENGNLIV  340 (571)
T ss_dssp             EEEECTTSEEEEEETTTCCEEE
T ss_pred             EEEeCCCcEEEEEECCCCCEEe
Confidence            7788899999999998886543

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=97.11  E-value=0.023  Score=47.31  Aligned_cols=131  Identities=10%  Similarity=0.006  Sum_probs=84.3

Q ss_pred             ccceeeeEEeeccCCCeE--EEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCC
Q psy8430         148 LLSCYKIRSFSGHRDGVW--DVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK  225 (361)
Q Consensus       148 ~~~~~~~~~l~~h~~~V~--~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~  225 (361)
                      ..+++.++.+ - .....  .+++..+ .+....-.++.+.+||..+.+.+.++... ..-..++  +++..|+.+..++
T Consensus        82 ~~Tgkv~~~~-l-~~~~FgeGit~~g~-~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~  155 (268)
T 3nok_A           82 LESAQPVWME-R-LGNIFAEGLASDGE-RLYQLTWTEGLLFTWSGMPPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGT  155 (268)
T ss_dssp             SSCSSCSEEE-E-CTTCCEEEEEECSS-CEEEEESSSCEEEEEETTTTEEEEEEECS-SCCCCEE--EETTEEEEECSSS
T ss_pred             CCCCcEEeEE-C-CCCcceeEEEEeCC-EEEEEEccCCEEEEEECCcCcEEEEEeCC-CceeEEe--cCCCEEEEECCCC
Confidence            3445555554 1 12232  3555432 35555567899999999999999998843 2223444  4678887777788


Q ss_pred             cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC--CC---CcEEEEEEcCCCCEEEEEeCCCcEEEeeC
Q psy8430         226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG--HS---NVVIAADWLSDGEQVITASWDRVANLFDV  300 (361)
Q Consensus       226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~v~~~~~~~~~~~l~s~~~d~~v~iwd~  300 (361)
                      .|.++|..+.+.                          ...+..  +.   ..++.+.|. +|...+..-.++.|.+.|.
T Consensus       156 ~l~~iDp~T~~v--------------------------~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp  208 (268)
T 3nok_A          156 MLTFHEPDGFAL--------------------------VGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDP  208 (268)
T ss_dssp             EEEEECTTTCCE--------------------------EEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECT
T ss_pred             EEEEEcCCCCeE--------------------------EEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeC
Confidence            999999876532                          222221  11   245667776 6754444445788999999


Q ss_pred             CCCeEEEEeec
Q psy8430         301 ETGTILQSLTG  311 (361)
Q Consensus       301 ~~~~~~~~~~~  311 (361)
                      .+|+.+..+..
T Consensus       209 ~TG~V~~~Idl  219 (268)
T 3nok_A          209 ATGTVVGVIDA  219 (268)
T ss_dssp             TTCBEEEEEEC
T ss_pred             CCCcEEEEEEC
Confidence            99999988863

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=97.09  E-value=0.036  Score=52.29  Aligned_cols=73  Identities=7%  Similarity=-0.051  Sum_probs=50.4

Q ss_pred             EEEEcCCCCEEEEEeC--------------------C----CcEEEEeCCCCeEEEEEeC--CC--------CCeEEEEE
Q psy8430         166 DVAVRPGQPVLGSASA--------------------D----RTVRLWSTQTGKCVLQYSG--HS--------GSVNSVRF  211 (361)
Q Consensus       166 ~l~~~~~~~~l~s~s~--------------------d----~~i~~wd~~~~~~~~~~~~--h~--------~~v~~v~~  211 (361)
                      .++++|...+++.+..                    |    +.|..+|..+|+.+-.++.  |.        .++. +..
T Consensus       250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~  328 (582)
T 1flg_A          250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDY  328 (582)
T ss_dssp             CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEE
T ss_pred             CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Eee
Confidence            3567777677666653                    2    5899999999998887753  32        1222 122


Q ss_pred             e-cCCC---EEEEEECCCcEEEEecccccccc
Q psy8430         212 L-PNKD---LVLSASGDKSVHIWQAVINWECL  239 (361)
Q Consensus       212 ~-~~~~---~l~s~~~d~~i~lwd~~~~~~~~  239 (361)
                      . .+|+   .++.++.+|.+.++|..+++.+.
T Consensus       329 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw  360 (582)
T 1flg_A          329 KAKDGKIVKATAHADRNGFFYVVDRSNGKLQN  360 (582)
T ss_dssp             ECSSSCEEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred             ecCCCCEEEEEEEECCCceEEEEECCCCCEec
Confidence            1 3564   67889999999999998887654

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=97.04  E-value=0.017  Score=54.43  Aligned_cols=31  Identities=23%  Similarity=0.195  Sum_probs=26.9

Q ss_pred             CCCEEEEEeCCCcEEEeeCCCCeEEEEeecC
Q psy8430         282 DGEQVITASWDRVANLFDVETGTILQSLTGH  312 (361)
Q Consensus       282 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h  312 (361)
                      .+..++.++.|+.|+.||.++|+.+.++...
T Consensus       474 ~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~  504 (571)
T 2ad6_A          474 KGGLVWYATLDGYLKALDNKDGKELWNFKMP  504 (571)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred             CCCEEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence            5678888999999999999999999888744

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=97.01  E-value=0.063  Score=50.77  Aligned_cols=73  Identities=12%  Similarity=0.037  Sum_probs=50.7

Q ss_pred             EEEEcCCCCEEEEEeCC----------------CcEEEEeCCCCeEEEEEeCCCC----------CeEEEEEe-cCC---
Q psy8430         166 DVAVRPGQPVLGSASAD----------------RTVRLWSTQTGKCVLQYSGHSG----------SVNSVRFL-PNK---  215 (361)
Q Consensus       166 ~l~~~~~~~~l~s~s~d----------------~~i~~wd~~~~~~~~~~~~h~~----------~v~~v~~~-~~~---  215 (361)
                      ..++++...+++.+..+                +.|..+|..+|+.+-.++....          ++. +... .+|   
T Consensus       245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~  323 (599)
T 1w6s_A          245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKAR  323 (599)
T ss_dssp             CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEE
T ss_pred             ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEE
Confidence            35677777777777655                3799999999998877764221          122 2222 456   


Q ss_pred             CEEEEEECCCcEEEEecccccccc
Q psy8430         216 DLVLSASGDKSVHIWQAVINWECL  239 (361)
Q Consensus       216 ~~l~s~~~d~~i~lwd~~~~~~~~  239 (361)
                      ..++.++.+|.+.++|..+++.+.
T Consensus       324 ~~v~~~~~~G~l~~lD~~tG~~lw  347 (599)
T 1w6s_A          324 KLLTHPDRNGIVYTLDRTDGALVS  347 (599)
T ss_dssp             EEEEEECTTSEEEEEETTTCCEEE
T ss_pred             EEEEEECCCcEEEEEECCCCCEee
Confidence            467778899999999998886643

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=97.00  E-value=0.1  Score=44.65  Aligned_cols=124  Identities=17%  Similarity=0.107  Sum_probs=75.4

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCC--cEEE
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK--SVHI  229 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~--~i~l  229 (361)
                      +.+..+... .....++|+++|.++++-..++.|..||.... ....+. ....+..+++.++++++++.....  .|..
T Consensus        23 ~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~   99 (306)
T 2p4o_A           23 KIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVS   99 (306)
T ss_dssp             EEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred             eEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEE
Confidence            344444333 45778999999998777778899999998653 333333 346789999999999766654433  3555


Q ss_pred             EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC
Q psy8430         230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  303 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~  303 (361)
                      ++..++...                        .+... ........++..+.+..+++-..++.|+++|..++
T Consensus       100 ~d~~~g~~~------------------------~~~~~-~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~  148 (306)
T 2p4o_A          100 LVKSDGTVE------------------------TLLTL-PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP  148 (306)
T ss_dssp             EECTTSCEE------------------------EEEEC-TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred             EcCCCCeEE------------------------EEEeC-CCccccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence            665443110                        01111 11223344455555444444445788989998764

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=96.97  E-value=0.074  Score=43.73  Aligned_cols=107  Identities=7%  Similarity=0.084  Sum_probs=73.2

Q ss_pred             CEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCC
Q psy8430         174 PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEP  253 (361)
Q Consensus       174 ~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~  253 (361)
                      .+....-.++.+.+||..+.+.+.++.... .=..++  +++..|+.+..++.|.++|..+...                
T Consensus        76 ~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~----------------  136 (243)
T 3mbr_X           76 RLIQLTWRNHEGFVYDLATLTPRARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQ----------------  136 (243)
T ss_dssp             EEEEEESSSSEEEEEETTTTEEEEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTCCE----------------
T ss_pred             EEEEEEeeCCEEEEEECCcCcEEEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCCeE----------------
Confidence            344455568899999999999999988432 223444  5677777777788999999876532                


Q ss_pred             CCCceecccccEEEeC--CC---CcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430         254 DESSITLRTPVKELLG--HS---NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       254 ~~~~~~~~~~~~~~~~--~~---~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~  310 (361)
                                ...+..  +.   ..++.+.|. +|...+..-.+..|.+.|..+|+.+..+.
T Consensus       137 ----------~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~id  187 (243)
T 3mbr_X          137 ----------VGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWID  187 (243)
T ss_dssp             ----------EEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEE
T ss_pred             ----------EEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEE
Confidence                      222221  11   245566665 56544444457889999999999998886

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=96.92  E-value=0.077  Score=44.14  Aligned_cols=127  Identities=9%  Similarity=0.117  Sum_probs=84.4

Q ss_pred             EEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeC-CCCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430         155 RSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSG-HSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       155 ~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~  232 (361)
                      +.+.|-.+.+..++|+|++. ++++...++.|...|.. ++.+..+.- -..-.-.|++.+++.++++.-.++.+.++++
T Consensus        20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v   98 (255)
T 3qqz_A           20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL   98 (255)
T ss_dssp             EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred             eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence            45667667899999999766 55557778899999997 887777642 2256788899888877676667788999887


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceecccccEEE--eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCC
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKEL--LGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  301 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~  301 (361)
                      ......                   .........+  .........++|+|.++.|+++.......+|.+.
T Consensus        99 ~~~~~i-------------------~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~  150 (255)
T 3qqz_A           99 TPNSEV-------------------KILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN  150 (255)
T ss_dssp             CTTCCE-------------------EEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred             CCCCee-------------------eeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence            543210                   0000000000  1234457899999999888887766555555543

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=96.82  E-value=0.027  Score=55.06  Aligned_cols=70  Identities=13%  Similarity=0.018  Sum_probs=47.5

Q ss_pred             EEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCe--EEEEEe-CCCCCeEEEEEecCCCEEEEEECC---CcEEEEecc
Q psy8430         165 WDVAVRPGQPVLGSASAD-----RTVRLWSTQTGK--CVLQYS-GHSGSVNSVRFLPNKDLVLSASGD---KSVHIWQAV  233 (361)
Q Consensus       165 ~~l~~~~~~~~l~s~s~d-----~~i~~wd~~~~~--~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d---~~i~lwd~~  233 (361)
                      ..+.|+|||+.|+....|     ..|.++++.++.  ....+. ........+.|+|+|++|+..+.+   ..|.++|+.
T Consensus       224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~  303 (751)
T 2xe4_A          224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLR  303 (751)
T ss_dssp             SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred             eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence            457899999877777665     258888887763  233443 233456788999999987765432   357777775


Q ss_pred             c
Q psy8430         234 I  234 (361)
Q Consensus       234 ~  234 (361)
                      +
T Consensus       304 ~  304 (751)
T 2xe4_A          304 K  304 (751)
T ss_dssp             S
T ss_pred             C
Confidence            4

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=96.73  E-value=0.052  Score=48.37  Aligned_cols=118  Identities=13%  Similarity=0.119  Sum_probs=78.9

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe------------EEEEEeC------CCCCeEEEEEec---CCCEEEEE
Q psy8430         163 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGK------------CVLQYSG------HSGSVNSVRFLP---NKDLVLSA  221 (361)
Q Consensus       163 ~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~------------~~~~~~~------h~~~v~~v~~~~---~~~~l~s~  221 (361)
                      .|..+..+|+|.+||..+. .+|.|-.+..+.            ....+.-      ...+|..+.|+|   .+..|++-
T Consensus        67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL  145 (452)
T 3pbp_A           67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL  145 (452)
T ss_dssp             TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred             ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence            5788999999999998865 488887776321            1223331      257899999999   45689999


Q ss_pred             ECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe--CCCcEEE
Q psy8430         222 SGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS--WDRVANL  297 (361)
Q Consensus       222 ~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~d~~v~i  297 (361)
                      ..|+.|++||+......+.                .................|.+++|.++|-.|+..+  ..|-|+-
T Consensus       146 tsD~~Ir~yDl~~s~~~P~----------------~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA  207 (452)
T 3pbp_A          146 KEDDTITMFDILNSQEKPI----------------VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA  207 (452)
T ss_dssp             ETTSCEEEEETTCTTSCCE----------------EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred             ecCCEEEEEEcccCCCCCc----------------chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence            9999999999976322111                0000001112223346788999999887777755  7787765

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=96.71  E-value=0.011  Score=55.98  Aligned_cols=33  Identities=24%  Similarity=0.300  Sum_probs=28.1

Q ss_pred             CCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCC
Q psy8430         282 DGEQVITASWDRVANLFDVETGTILQSLTGHDE  314 (361)
Q Consensus       282 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~  314 (361)
                      .+..++.++.|+.++.||.++|+.+-++....+
T Consensus       496 agglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g  528 (582)
T 1flg_A          496 AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSG  528 (582)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred             CCCEEEEECCCCcEEEEECCCCCEEEEecCCCC
Confidence            467888899999999999999999988875443

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=96.70  E-value=0.075  Score=50.27  Aligned_cols=32  Identities=22%  Similarity=0.269  Sum_probs=27.4

Q ss_pred             CCCEEEEEeCCCcEEEeeCCCCeEEEEeecCC
Q psy8430         282 DGEQVITASWDRVANLFDVETGTILQSLTGHD  313 (361)
Q Consensus       282 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~  313 (361)
                      .+..++.++.|+.++.||.++|+.+-++....
T Consensus       483 agg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~  514 (599)
T 1w6s_A          483 AGDLVFYGTLDGYLKARDSDTGDLLWKFKIPS  514 (599)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred             cCCEEEEECCCCeEEEEECCCCCEEEEeeCCC
Confidence            57788889999999999999999998876443

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=96.69  E-value=0.11  Score=46.91  Aligned_cols=151  Identities=12%  Similarity=0.053  Sum_probs=88.1

Q ss_pred             CeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC-CC----cEEEEeccccc
Q psy8430         163 GVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DK----SVHIWQAVINW  236 (361)
Q Consensus       163 ~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~----~i~lwd~~~~~  236 (361)
                      ....++++| ++..|..+...+.|+.+|+..+... .+.........|+|+++++.|+.+.. ++    .+..++.. +.
T Consensus       138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~-~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~  215 (430)
T 3tc9_A          138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS-TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SG  215 (430)
T ss_dssp             CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE-EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GT
T ss_pred             CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE-EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cc
Confidence            457899998 3555555555588999999776644 33335667899999999996555544 22    23333321 10


Q ss_pred             cccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEeeCCCCeEEEEeecCC-C
Q psy8430         237 ECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTGHD-E  314 (361)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~-~  314 (361)
                                           ..   ....+. .......++++| +|..+++-..++.|..+|..++.......... .
T Consensus       216 ---------------------~~---~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~  270 (430)
T 3tc9_A          216 ---------------------FK---VITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSG  270 (430)
T ss_dssp             ---------------------SC---SEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSS
T ss_pred             ---------------------ee---eeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCC
Confidence                                 00   001111 123456778999 67766666677899999998765422222211 2


Q ss_pred             CCeEEEEEcCC--Ccc--cCCCeEEEEcCC
Q psy8430         315 EPHILCVSSYY--SKV--SCDLFQRIQHLD  340 (361)
Q Consensus       315 ~v~~~~~s~s~--~~v--~~dg~i~iW~~d  340 (361)
                      ....+.+.+.+  ++|  ...+.|..++.|
T Consensus       271 ~P~gia~~pdG~~lyv~d~~~~~I~~~~~d  300 (430)
T 3tc9_A          271 WEFHIQFHPSGNYAYIVVVNQHYILRSDYD  300 (430)
T ss_dssp             CCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred             cceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence            23445555442  233  256778787444

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=96.60  E-value=0.25  Score=43.18  Aligned_cols=114  Identities=7%  Similarity=-0.041  Sum_probs=73.0

Q ss_pred             CCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC-EEEEEECC-CcEEEEeccccccc
Q psy8430         162 DGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSASGD-KSVHIWQAVINWEC  238 (361)
Q Consensus       162 ~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d-~~i~lwd~~~~~~~  238 (361)
                      .....+++++. +.++++-...+.|.+.++........+.........++++|.+. ++++-..+ +.|..+++...   
T Consensus       116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~---  192 (349)
T 3v64_C          116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS---  192 (349)
T ss_dssp             SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---
T ss_pred             CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC---
Confidence            44568899874 44556666678999999875443333334446789999998555 45554444 67777776432   


Q ss_pred             cCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEeeCCC
Q psy8430         239 LNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVET  302 (361)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~  302 (361)
                                              ....+ ...-.....++|+|++..|+.+. ..+.|..+|+..
T Consensus       193 ------------------------~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG  234 (349)
T 3v64_C          193 ------------------------GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG  234 (349)
T ss_dssp             ------------------------SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             ------------------------CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence                                    11111 12234578899998777776665 456799999864

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=96.59  E-value=0.38  Score=47.11  Aligned_cols=116  Identities=13%  Similarity=0.044  Sum_probs=80.3

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeC--------CCCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430         161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG--------HSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~--------h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~  232 (361)
                      ...|.++..+++|.+. .|+.++-|..|+..++........        ....|.++...++++.|..|+.++-+..||.
T Consensus       356 ~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~  434 (795)
T 4a2l_A          356 DNVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHR  434 (795)
T ss_dssp             CSSEEEEEECTTSCEE-EEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEET
T ss_pred             CCeeEEEEECCCCCEE-EEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeC
Confidence            3569999999988655 466777788999877654332211        2467899999888885667788778999997


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceecccccEEEe-----CCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEE
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELL-----GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  306 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~  306 (361)
                      .++..                           ..+.     .....|.++...++|...+.. . +-+.+||..+++..
T Consensus       435 ~~~~~---------------------------~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~  484 (795)
T 4a2l_A          435 NSGQV---------------------------ENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFT  484 (795)
T ss_dssp             TTCCE---------------------------EEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEE
T ss_pred             CCCcE---------------------------EEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEE
Confidence            65421                           1111     234578999998888766554 4 45889998877654

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=96.45  E-value=0.44  Score=42.23  Aligned_cols=154  Identities=10%  Similarity=-0.052  Sum_probs=88.7

Q ss_pred             cCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC-EEEEEECCCcEEEEecccccc
Q psy8430         160 HRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAVINWE  237 (361)
Q Consensus       160 h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~lwd~~~~~~  237 (361)
                      ....+..++|++.+. ++++-...+.|..++...+.....+.........+++.+.+. ++++-...+.|.+.++.... 
T Consensus       114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~-  192 (386)
T 3v65_B          114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-  192 (386)
T ss_dssp             SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS-
T ss_pred             CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc-
Confidence            345578999998555 555555678899999876654433333334567888987544 45555566778887764321 


Q ss_pred             ccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC--CcEEEeeCCCCeEEEEeec-CCC
Q psy8430         238 CLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD--RVANLFDVETGTILQSLTG-HDE  314 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--~~v~iwd~~~~~~~~~~~~-h~~  314 (361)
                                               ....+...-.....++++|.+.+|+.+...  +.|..+++.. .....+.. .-.
T Consensus       193 -------------------------~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~~~~~~~  246 (386)
T 3v65_B          193 -------------------------RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG-SGRRIIADTHLF  246 (386)
T ss_dssp             -------------------------CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEEEECSSCS
T ss_pred             -------------------------eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCC-CCcEEEEECCCC
Confidence                                     111122233567889999877776666543  5688888763 33333321 111


Q ss_pred             CCeEEEEEcC--CCcc--cCCCeEEEEcCC
Q psy8430         315 EPHILCVSSY--YSKV--SCDLFQRIQHLD  340 (361)
Q Consensus       315 ~v~~~~~s~s--~~~v--~~dg~i~iW~~d  340 (361)
                      ....+.+...  .+++  ...+.|..+++|
T Consensus       247 ~PnGlavd~~~~~lY~aD~~~~~I~~~d~d  276 (386)
T 3v65_B          247 WPNGLTIDYAGRRMYWVDAKHHVIERANLD  276 (386)
T ss_dssp             CEEEEEEEGGGTEEEEEETTTTEEEEECTT
T ss_pred             CeeeEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence            2233444422  2222  256677777443

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=96.35  E-value=0.46  Score=41.44  Aligned_cols=153  Identities=10%  Similarity=-0.056  Sum_probs=88.7

Q ss_pred             CCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCC-CEEEEEECCCcEEEEeccccccc
Q psy8430         161 RDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWEC  238 (361)
Q Consensus       161 ~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~i~lwd~~~~~~~  238 (361)
                      ...+..++|++... ++.+-...+.|..+++..+.....+.........+++.+.+ .++++-...+.|.+.++....  
T Consensus        72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~--  149 (349)
T 3v64_C           72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH--  149 (349)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS--
T ss_pred             CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc--
Confidence            34578999997555 44455567889999987665443333333556789998754 455565667889998875321  


Q ss_pred             cCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC-C-CcEEEeeCCCCeEEEEeecC-CCC
Q psy8430         239 LNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-D-RVANLFDVETGTILQSLTGH-DEE  315 (361)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d-~~v~iwd~~~~~~~~~~~~h-~~~  315 (361)
                                              ....+...-.....++++|.+.+|+.+.. . +.|..+++. |.....+... -..
T Consensus       150 ------------------------~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~~~~~~~~~  204 (349)
T 3v64_C          150 ------------------------RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD-GSGRRIIADTHLFW  204 (349)
T ss_dssp             ------------------------CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCSCEESCCSSCSC
T ss_pred             ------------------------eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC-CCCcEEEEECCCCC
Confidence                                    11112233356788999997666665554 3 678888876 3333333221 112


Q ss_pred             CeEEEEEcC--CCcc--cCCCeEEEEcCC
Q psy8430         316 PHILCVSSY--YSKV--SCDLFQRIQHLD  340 (361)
Q Consensus       316 v~~~~~s~s--~~~v--~~dg~i~iW~~d  340 (361)
                      ...+.+...  .+++  ...+.|..+++|
T Consensus       205 PnGla~d~~~~~lY~aD~~~~~I~~~~~d  233 (349)
T 3v64_C          205 PNGLTIDYAGRRMYWVDAKHHVIERANLD  233 (349)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             cceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence            233444422  2222  255677777444

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=96.21  E-value=0.65  Score=45.50  Aligned_cols=121  Identities=10%  Similarity=-0.054  Sum_probs=78.1

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe----CCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccc
Q psy8430         161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS----GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW  236 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~----~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~  236 (361)
                      ...|.++..+++|..|..|+.++-+..||..+++......    .....|.++...+++.+.+.. . +-+.+||..++.
T Consensus       405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~  482 (795)
T 4a2l_A          405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRS  482 (795)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTE
T ss_pred             CccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCe
Confidence            3679999999988856667777779999998776433221    134678999988887765544 4 458888876542


Q ss_pred             cccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE
Q psy8430         237 ECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI  305 (361)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~  305 (361)
                      ....                    ......-......|.++...++|...+.+.  +-+..||..+++.
T Consensus       483 ~~~~--------------------~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~  529 (795)
T 4a2l_A          483 FTTI--------------------EKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI  529 (795)
T ss_dssp             EEEC--------------------CBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE
T ss_pred             EEEc--------------------cccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE
Confidence            1100                    000000011235788999998887666554  4588899887765

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=96.20  E-value=0.1  Score=44.97  Aligned_cols=119  Identities=8%  Similarity=0.005  Sum_probs=79.8

Q ss_pred             eEEEEE---cCCCCEEEEEe-------------CCCcEEEEeCC---CCeEEEEEe--C-----------CCCCeEEEEE
Q psy8430         164 VWDVAV---RPGQPVLGSAS-------------ADRTVRLWSTQ---TGKCVLQYS--G-----------HSGSVNSVRF  211 (361)
Q Consensus       164 V~~l~~---~~~~~~l~s~s-------------~d~~i~~wd~~---~~~~~~~~~--~-----------h~~~v~~v~~  211 (361)
                      +..|.|   +|++.++++..             .+..+..+|+.   +++.+....  .           -......++.
T Consensus        65 ~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvav  144 (334)
T 2p9w_A           65 MSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQ  144 (334)
T ss_dssp             EEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEE
T ss_pred             eeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEE
Confidence            578999   68877777544             26789999998   776654443  1           1135889999


Q ss_pred             ecCCCEEEEEECC-CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe
Q psy8430         212 LPNKDLVLSASGD-KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS  290 (361)
Q Consensus       212 ~~~~~~l~s~~~d-~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~  290 (361)
                      .++|+..++++.- +.|...+.......                  .+....+   ........+.++++|+|..|++..
T Consensus       145 D~~GnaYVt~s~~~~~I~rV~pdG~~~~------------------~~~~~~~---~~~~~~G~nGIv~~pdg~~Liv~~  203 (334)
T 2p9w_A          145 DRDGNSYVAFALGMPAIARVSADGKTVS------------------TFAWESG---NGGQRPGYSGITFDPHSNKLIAFG  203 (334)
T ss_dssp             CTTSCEEEEEEESSCEEEEECTTSCCEE------------------EEEECCC---CSSSCCSCSEEEEETTTTEEEEES
T ss_pred             CCCCCEEEeCCCCCCeEEEEeCCCCEEe------------------eeeecCC---CcccccCcceEEEeCCCCEEEEEc
Confidence            9999999998887 77666665322000                  0000000   011123466889999999999887


Q ss_pred             CCCcEEEeeCCCC
Q psy8430         291 WDRVANLFDVETG  303 (361)
Q Consensus       291 ~d~~v~iwd~~~~  303 (361)
                      ..|.+..+|+.+.
T Consensus       204 ~~g~L~~fD~~~p  216 (334)
T 2p9w_A          204 GPRALTAFDVSKP  216 (334)
T ss_dssp             SSSSEEEEECSSS
T ss_pred             CCCeEEEEcCCCC
Confidence            7999999998753

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=96.16  E-value=0.54  Score=40.30  Aligned_cols=153  Identities=8%  Similarity=-0.101  Sum_probs=86.6

Q ss_pred             CCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCC----CeEEEEEeCCCCCeEEEEEecCC-CEEEEEECCCcEEEEeccc
Q psy8430         161 RDGVWDVAVRPGQP-VLGSASADRTVRLWSTQT----GKCVLQYSGHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVI  234 (361)
Q Consensus       161 ~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~----~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~i~lwd~~~  234 (361)
                      ...+..++|++.+. ++++-...+.|..+++..    ......+.........+++.+.+ +++++-...+.|.+.++..
T Consensus        29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g  108 (316)
T 1ijq_A           29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG  108 (316)
T ss_dssp             CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence            45578999998655 555555668999999875    22222233233456889998754 4555656778899998753


Q ss_pred             cccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC--CcEEEeeCCCCeEEEEeecC
Q psy8430         235 NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD--RVANLFDVETGTILQSLTGH  312 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--~~v~iwd~~~~~~~~~~~~h  312 (361)
                      ..                          ..............++++|.+.+|+.+...  +.|..+++. |.....+...
T Consensus       109 ~~--------------------------~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~  161 (316)
T 1ijq_A          109 VK--------------------------RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTE  161 (316)
T ss_dssp             SS--------------------------EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECS
T ss_pred             Cc--------------------------eEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEEC
Confidence            21                          111122233567889999977766666543  678888875 4433333221


Q ss_pred             C-CCCeEEEEEcC--CCcc--cCCCeEEEEcCC
Q psy8430         313 D-EEPHILCVSSY--YSKV--SCDLFQRIQHLD  340 (361)
Q Consensus       313 ~-~~v~~~~~s~s--~~~v--~~dg~i~iW~~d  340 (361)
                      . .....+.+...  .+++  ...+.|..+++|
T Consensus       162 ~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d  194 (316)
T 1ijq_A          162 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN  194 (316)
T ss_dssp             SCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             CCCCceEEEEeccCCEEEEEECCCCeEEEEecC
Confidence            1 22223444422  2222  156677777444

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=96.02  E-value=0.52  Score=42.52  Aligned_cols=153  Identities=12%  Similarity=0.114  Sum_probs=86.6

Q ss_pred             CCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECC---Cc-EEEEecccc
Q psy8430         162 DGVWDVAVRPG--QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD---KS-VHIWQAVIN  235 (361)
Q Consensus       162 ~~V~~l~~~~~--~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d---~~-i~lwd~~~~  235 (361)
                      .....++|+|+  ...|..+...+.|+.+|..++.... +.........++|+++++++++....   .. +...+....
T Consensus       139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~-~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~  217 (433)
T 4hw6_A          139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI-KTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG  217 (433)
T ss_dssp             SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEE-ECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred             CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEE-eecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC
Confidence            34678999984  3344444444899999998776543 44455678999999999955554322   12 222222111


Q ss_pred             ccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEeeCCCCeEEEEee-cCC
Q psy8430         236 WECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSLT-GHD  313 (361)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~-~h~  313 (361)
                                            ..   ....+. .......++++| +|.++++-..++.|+.+|..++.....+. ...
T Consensus       218 ----------------------~~---~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~  271 (433)
T 4hw6_A          218 ----------------------FT---ERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT  271 (433)
T ss_dssp             ----------------------TC---CEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC
T ss_pred             ----------------------ee---cccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC
Confidence                                  00   001111 233456688999 67666666677889999998777633332 111


Q ss_pred             CC-CeEEEEEcCC--Ccc--cCCCeEEEEcCCC
Q psy8430         314 EE-PHILCVSSYY--SKV--SCDLFQRIQHLDC  341 (361)
Q Consensus       314 ~~-v~~~~~s~s~--~~v--~~dg~i~iW~~d~  341 (361)
                      .. ...+.+++..  +++  ...+.|+.+++|.
T Consensus       272 ~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~  304 (433)
T 4hw6_A          272 KGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNR  304 (433)
T ss_dssp             CSSCEEEEECTTSSEEEEEETTTTEEEEEEBCT
T ss_pred             CCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCC
Confidence            11 2234454442  233  2566777774443

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=95.96  E-value=0.15  Score=46.04  Aligned_cols=116  Identities=9%  Similarity=0.074  Sum_probs=70.8

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeC-CC----cEEEEeCCCCeE--EEEEeCCCCCeEEEEEec-CCCEEEEEECCCcEEEE
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASA-DR----TVRLWSTQTGKC--VLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIW  230 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~-d~----~i~~wd~~~~~~--~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~lw  230 (361)
                      ........++|+++|+.|+.+.. ++    .+.+++. .+..  ...+. .......++++| ++.++++-..++.|..+
T Consensus       176 ~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~  253 (430)
T 3tc9_A          176 SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRY  253 (430)
T ss_dssp             CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEE
T ss_pred             cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEE
Confidence            34566889999999995555544 22    2333443 2311  12232 234457788999 67777776678899999


Q ss_pred             eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEE-eCCCcEEEeeCC
Q psy8430         231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA-SWDRVANLFDVE  301 (361)
Q Consensus       231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~d~~v~iwd~~  301 (361)
                      +...+..                        ..+.. .+.......++|+|+|++|+.+ ...+.|..++..
T Consensus       254 ~~~~~~~------------------------~~~~~-~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d  300 (430)
T 3tc9_A          254 DFTTQET------------------------TPLFT-IQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD  300 (430)
T ss_dssp             ETTTTEE------------------------EEEEE-CSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred             ECCCCcE------------------------EEEEE-cCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence            8764311                        01111 1122456789999999965555 456788888765

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=95.93  E-value=0.63  Score=40.46  Aligned_cols=137  Identities=11%  Similarity=0.180  Sum_probs=82.7

Q ss_pred             CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC----CC---EEEEEEC---CCcEEEEecc--cccccc
Q psy8430         172 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN----KD---LVLSASG---DKSVHIWQAV--INWECL  239 (361)
Q Consensus       172 ~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~----~~---~l~s~~~---d~~i~lwd~~--~~~~~~  239 (361)
                      ...+++.....+-+.+||+ +|+.+..+..  +.++.|..-|+    ++   ++++...   +.+|.+|++.  ++    
T Consensus        39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~----  111 (355)
T 3amr_A           39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG----  111 (355)
T ss_dssp             GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC----
T ss_pred             CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC----
Confidence            4457777778889999999 8888888763  67888888773    22   2333343   5789999763  22    


Q ss_pred             CCCCCCCCCCCCCCCCCceecccccEEE-------eCCCCcEEEEEE--cCC-CC-EEEEEeCCCcEEEeeCC-------
Q psy8430         240 NNDNDSDLDESKEPDESSITLRTPVKEL-------LGHSNVVIAADW--LSD-GE-QVITASWDRVANLFDVE-------  301 (361)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~--~~~-~~-~l~s~~~d~~v~iwd~~-------  301 (361)
                                             ++..+       ...-..++.+++  +|. +. +++....+|.+..|++.       
T Consensus       112 -----------------------~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~  168 (355)
T 3amr_A          112 -----------------------TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYI  168 (355)
T ss_dssp             -----------------------CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCE
T ss_pred             -----------------------ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcc
Confidence                                   11111       011145566666  674 44 68888888999999882       


Q ss_pred             CCeEEEEeecCCCCCeEEEEEc--CCCccc-CCCeEEEEcCCC
Q psy8430         302 TGTILQSLTGHDEEPHILCVSS--YYSKVS-CDLFQRIQHLDC  341 (361)
Q Consensus       302 ~~~~~~~~~~h~~~v~~~~~s~--s~~~v~-~dg~i~iW~~d~  341 (361)
                      +++.++++...+ .+..+++-.  +.++++ .|..  ||.+|.
T Consensus       169 ~~~lVR~f~lgs-q~EgcvvDd~~g~Lyv~eEd~G--Iw~~da  208 (355)
T 3amr_A          169 SGKKVRAFKMNS-QTEGMAADDEYGRLYIAEEDEA--IWKFSA  208 (355)
T ss_dssp             EEEEEEEEECSS-CEEEEEEETTTTEEEEEETTTE--EEEEEC
T ss_pred             cceEEEEecCCC-CcceEEEcCCCCeEEEecccce--EEEEeC
Confidence            446677776543 333333321  123333 4433  665564

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=95.91  E-value=0.87  Score=40.54  Aligned_cols=118  Identities=7%  Similarity=-0.133  Sum_probs=74.4

Q ss_pred             ccCCCeEEEEEcCCCCE-EEEEeCCCcEEEEeCCCC----eEEEEEeCCCCCeEEEEEec-CCCEEEEEECCCcEEEEec
Q psy8430         159 GHRDGVWDVAVRPGQPV-LGSASADRTVRLWSTQTG----KCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~-l~s~s~d~~i~~wd~~~~----~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~lwd~  232 (361)
                      .....+..++|++.+.. +.+-...+.|..+++...    .....+.........+++.+ .++++++-...+.|.+.++
T Consensus       109 ~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~  188 (400)
T 3p5b_L          109 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT  188 (400)
T ss_dssp             CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred             cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeC
Confidence            34567889999986554 444455688998988652    22333333456778899998 4555556566788888887


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC--CCcEEEeeCCC
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW--DRVANLFDVET  302 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--d~~v~iwd~~~  302 (361)
                      ....                          ....+.........++++|.+.+|+.+..  .+.|...++..
T Consensus       189 ~g~~--------------------------~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG  234 (400)
T 3p5b_L          189 KGVK--------------------------RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG  234 (400)
T ss_dssp             TTCS--------------------------EEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS
T ss_pred             CCCc--------------------------eEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC
Confidence            5331                          11122223445788999997777766653  36788888763

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=95.80  E-value=0.94  Score=40.09  Aligned_cols=149  Identities=7%  Similarity=-0.069  Sum_probs=84.4

Q ss_pred             CCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEE-EEECC-CcEEEEeccccccc
Q psy8430         162 DGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGD-KSVHIWQAVINWEC  238 (361)
Q Consensus       162 ~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d-~~i~lwd~~~~~~~  238 (361)
                      .....+++++. +.++++-...+.|.+.++........+.........++++|.+..++ +-..+ +.|..+++...   
T Consensus       159 ~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~---  235 (386)
T 3v65_B          159 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS---  235 (386)
T ss_dssp             SCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---
T ss_pred             CCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC---
Confidence            34567888874 44555556677888888865443333333446789999998665544 44444 66777766432   


Q ss_pred             cCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEeeCCCCeEEEEeecCCCCC
Q psy8430         239 LNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTGHDEEP  316 (361)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~h~~~v  316 (361)
                                              ....+ ...-.....++|+|++..|+.+. ..+.|..+|+........+...-...
T Consensus       236 ------------------------~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P  291 (386)
T 3v65_B          236 ------------------------GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHP  291 (386)
T ss_dssp             ------------------------SCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSE
T ss_pred             ------------------------CcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCc
Confidence                                    11222 22334678999998777776655 45678899876432222222222222


Q ss_pred             eEEEEEcCCCccc--CCCeEEEE
Q psy8430         317 HILCVSSYYSKVS--CDLFQRIQ  337 (361)
Q Consensus       317 ~~~~~s~s~~~v~--~dg~i~iW  337 (361)
                      ..+.+....++++  ..+.|..+
T Consensus       292 ~giav~~~~ly~td~~~~~V~~~  314 (386)
T 3v65_B          292 FAITVFEDSLYWTDWHTKSINSA  314 (386)
T ss_dssp             EEEEEETTEEEEEETTTTEEEEE
T ss_pred             eEEEEECCEEEEeeCCCCeEEEE
Confidence            3333333222221  56777777

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=95.68  E-value=0.17  Score=48.42  Aligned_cols=116  Identities=16%  Similarity=0.216  Sum_probs=73.4

Q ss_pred             EEEEcC-CCCEEEEEeCCC-----------cEEEEeCCCCe--EEEEEe-CCCCCeEEEEEecCCCEEEEEEC-CCcEEE
Q psy8430         166 DVAVRP-GQPVLGSASADR-----------TVRLWSTQTGK--CVLQYS-GHSGSVNSVRFLPNKDLVLSASG-DKSVHI  229 (361)
Q Consensus       166 ~l~~~~-~~~~l~s~s~d~-----------~i~~wd~~~~~--~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~-d~~i~l  229 (361)
                      ++++.+ ++.+++.|+.+.           .+.+||..+++  .+..+. .+.....++++.+++.+++.|+. +..+.+
T Consensus       190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~  269 (656)
T 1k3i_A          190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL  269 (656)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred             eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence            556667 888888887653           58899988764  222332 23333445777889999999884 458999


Q ss_pred             EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe-CC-----CcEEEeeCCCC
Q psy8430         230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WD-----RVANLFDVETG  303 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d-----~~v~iwd~~~~  303 (361)
                      ||..+..                     +.   .+..+...... .++++.++|+.++.|+ .+     ..+.+||..+.
T Consensus       270 yd~~t~~---------------------W~---~~~~~~~~R~~-~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~  324 (656)
T 1k3i_A          270 YDSSSDS---------------------WI---PGPDMQVARGY-QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK  324 (656)
T ss_dssp             EEGGGTE---------------------EE---ECCCCSSCCSS-CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred             ecCcCCc---------------------ee---ECCCCCccccc-cceEEecCCeEEEEeCcccCCcccccceEeCCCCC
Confidence            9987541                     11   11111111111 2344567899999988 44     56899999876


Q ss_pred             eEE
Q psy8430         304 TIL  306 (361)
Q Consensus       304 ~~~  306 (361)
                      +..
T Consensus       325 ~W~  327 (656)
T 1k3i_A          325 TWT  327 (656)
T ss_dssp             EEE
T ss_pred             cce
Confidence            543

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=95.67  E-value=1.8  Score=42.36  Aligned_cols=122  Identities=11%  Similarity=-0.061  Sum_probs=75.4

Q ss_pred             cCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCC----eEEEEEeCCCCCeEEEEEecCCC-EEEEEECCCcEEEEecc
Q psy8430         160 HRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTG----KCVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAV  233 (361)
Q Consensus       160 h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~----~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~lwd~~  233 (361)
                      ....+..|+|++... ++++-...+.|+.+++...    .....+.........|++.+.+. ++++-...+.|.+.++.
T Consensus       422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld  501 (791)
T 3m0c_C          422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK  501 (791)
T ss_dssp             SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence            345677899998544 5555556678888888642    22333333455677899988665 45555567889998875


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEeCC--CcEEEeeCCCCeEEEEe
Q psy8430         234 INWECLNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASWD--RVANLFDVETGTILQSL  309 (361)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d--~~v~iwd~~~~~~~~~~  309 (361)
                      ..                           ....+ .........|+++|.+.+|+.+...  +.|.+.++. |.....+
T Consensus       502 G~---------------------------~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d-G~~~~~l  552 (791)
T 3m0c_C          502 GV---------------------------KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSL  552 (791)
T ss_dssp             SS---------------------------SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEE
T ss_pred             CC---------------------------eEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC-CCceEEE
Confidence            33                           11222 2334567899999987777666542  568888876 3333333

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=95.64  E-value=0.88  Score=38.63  Aligned_cols=84  Identities=12%  Similarity=0.056  Sum_probs=56.4

Q ss_pred             eEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCc
Q psy8430         194 KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNV  273 (361)
Q Consensus       194 ~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (361)
                      +.+..+.. ......++|+++++++++-..++.|..||....                           ....+ .....
T Consensus        23 ~~~~~~p~-~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~---------------------------~~~~~-~~~~~   73 (306)
T 2p4o_A           23 KIITSFPV-NTFLENLASAPDGTIFVTNHEVGEIVSITPDGN---------------------------QQIHA-TVEGK   73 (306)
T ss_dssp             EEEEEECT-TCCEEEEEECTTSCEEEEETTTTEEEEECTTCC---------------------------EEEEE-ECSSE
T ss_pred             eEeEeCCC-CCCcceEEECCCCCEEEEeCCCCeEEEECCCCc---------------------------eEEEE-eCCCC
Confidence            44555543 356789999999987777768889999986532                           11111 12346


Q ss_pred             EEEEEEcCCCCEEEEEeCCC--cEEEeeCCCCeEE
Q psy8430         274 VIAADWLSDGEQVITASWDR--VANLFDVETGTIL  306 (361)
Q Consensus       274 v~~~~~~~~~~~l~s~~~d~--~v~iwd~~~~~~~  306 (361)
                      ...++++++|+++++.....  .|..+|..+++..
T Consensus        74 p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~  108 (306)
T 2p4o_A           74 VSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE  108 (306)
T ss_dssp             EEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred             ceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence            88899999999766654432  4777787777754

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=95.47  E-value=0.58  Score=38.78  Aligned_cols=113  Identities=10%  Similarity=0.033  Sum_probs=68.2

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC---CCeEEEEEe-------CCCCCeEEEEEecCCCEEEE-EECCCcEEE
Q psy8430         161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQ---TGKCVLQYS-------GHSGSVNSVRFLPNKDLVLS-ASGDKSVHI  229 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~---~~~~~~~~~-------~h~~~v~~v~~~~~~~~l~s-~~~d~~i~l  229 (361)
                      ......|+|+|.++.|.++.......+|.++   .+..+..+.       .+...+..++++|....++. ...++.+..
T Consensus       120 N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~  199 (255)
T 3qqz_A          120 NCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQE  199 (255)
T ss_dssp             SSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred             cCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEE
Confidence            4557899999988766666555445555543   111122221       13345789999996555444 445567888


Q ss_pred             EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCC---------CCcEEEEEEcCCCCEEEEEeCCCcEEEeeC
Q psy8430         230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGH---------SNVVIAADWLSDGEQVITASWDRVANLFDV  300 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~  300 (361)
                      +|....                           .+..+.-.         ......++|.++|+ |+..+..+.++.|.-
T Consensus       200 ~d~~g~---------------------------~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~f~~  251 (255)
T 3qqz_A          200 VTLVGE---------------------------VIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYRFTP  251 (255)
T ss_dssp             ECTTCC---------------------------EEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEEEEC
T ss_pred             EcCCCC---------------------------EEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceEEEEEe
Confidence            886532                           22222111         23678899999997 555577787777754


Q ss_pred             C
Q psy8430         301 E  301 (361)
Q Consensus       301 ~  301 (361)
                      .
T Consensus       252 ~  252 (255)
T 3qqz_A          252 Q  252 (255)
T ss_dssp             -
T ss_pred             c
Confidence            3

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=95.11  E-value=1.3  Score=43.31  Aligned_cols=120  Identities=10%  Similarity=-0.015  Sum_probs=73.8

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe--CCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccc
Q psy8430         161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC  238 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~  238 (361)
                      ...|.++..+++|.+.+ |+.++-+..+|..+++......  .....|.++...+++.+.+ |+. +-+..+|..++.-.
T Consensus       406 ~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~  482 (781)
T 3v9f_A          406 SNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVI  482 (781)
T ss_dssp             CSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCC
T ss_pred             CcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEE
Confidence            46799999988886555 6666678889987775432211  1346789998887776544 455 55888887654210


Q ss_pred             cCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE
Q psy8430         239 LNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI  305 (361)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~  305 (361)
                      ..                  .   ...........|.++...++|...+.. .++-+..||..+++.
T Consensus       483 ~~------------------~---~~~~~~~~~~~i~~i~~d~~g~lWigt-~~~Gl~~~~~~~~~~  527 (781)
T 3v9f_A          483 HH------------------Y---DTSNSQLLENFVRSIAQDSEGRFWIGT-FGGGVGIYTPDMQLV  527 (781)
T ss_dssp             EE------------------E---CTTTSSCSCSCEEEEEECTTCCEEEEE-SSSCEEEECTTCCEE
T ss_pred             ec------------------c---cCcccccccceeEEEEEcCCCCEEEEE-cCCCEEEEeCCCCeE
Confidence            00                  0   000000113578899999888766554 434477899876654

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=95.08  E-value=1.7  Score=38.60  Aligned_cols=116  Identities=10%  Similarity=-0.066  Sum_probs=76.4

Q ss_pred             cCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE-C-CCcEEEEeccccc
Q psy8430         160 HRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-G-DKSVHIWQAVINW  236 (361)
Q Consensus       160 h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~-d~~i~lwd~~~~~  236 (361)
                      .......+++++ .+++.++-...+.|.+.+++.......+.........|+++|.+..|+-+. . .+.|...++... 
T Consensus       157 ~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~-  235 (400)
T 3p5b_L          157 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-  235 (400)
T ss_dssp             SCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC-
T ss_pred             CCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC-
Confidence            345677899998 455566666678999999876544444444455688999999655544433 3 367777776432 


Q ss_pred             cccCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEeeCCC
Q psy8430         237 ECLNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASW-DRVANLFDVET  302 (361)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd~~~  302 (361)
                                                ....+ ...-.....+++++++..|+.+.. .+.|..+|+..
T Consensus       236 --------------------------~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG  277 (400)
T 3p5b_L          236 --------------------------DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG  277 (400)
T ss_dssp             --------------------------SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             --------------------------ccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence                                      11222 223357789999988887777654 56799999864

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=95.02  E-value=1.6  Score=37.91  Aligned_cols=172  Identities=13%  Similarity=0.129  Sum_probs=102.4

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCC----CC---E-EEEEeC--CCcEEEEeCC--CCeEEEEEeC------CC-CCeEEEE
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPG----QP---V-LGSASA--DRTVRLWSTQ--TGKCVLQYSG------HS-GSVNSVR  210 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~----~~---~-l~s~s~--d~~i~~wd~~--~~~~~~~~~~------h~-~~v~~v~  210 (361)
                      .++.++.+..  +.++.+..-|+    |.   + +++.-.  +++|.+|++.  ++. +..+..      .. ..+..++
T Consensus        58 ~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlc  134 (355)
T 3amr_A           58 DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFT  134 (355)
T ss_dssp             TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEE
T ss_pred             CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEE
Confidence            5667777654  56777776663    22   2 333333  5799999773  333 444421      11 5566677


Q ss_pred             E--ecC-CC-EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEE
Q psy8430         211 F--LPN-KD-LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV  286 (361)
Q Consensus       211 ~--~~~-~~-~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  286 (361)
                      +  +|. +. +++....+|.+..|++.....                   .....+.++++.. .+.+..|...+...+|
T Consensus       135 ly~~~~~g~~yafV~~k~G~~~q~~l~~~~~-------------------g~~~~~lVR~f~l-gsq~EgcvvDd~~g~L  194 (355)
T 3amr_A          135 LYHSQKTGKYYAMVTGKEGEFEQYELKADKN-------------------GYISGKKVRAFKM-NSQTEGMAADDEYGRL  194 (355)
T ss_dssp             EEECTTTCCEEEEEECSSSEEEEEEEEECTT-------------------SCEEEEEEEEEEC-SSCEEEEEEETTTTEE
T ss_pred             EEecCCCCcEEEEEECCCCeEEEEEEEeCCC-------------------CcccceEEEEecC-CCCcceEEEcCCCCeE
Confidence            7  664 43 577778889999998842100                   0112234555543 4578899999989999


Q ss_pred             EEEeCCCcEEEeeCC-----CCeEEEEee-cCC-CCCeE------------EEEEcCCCcccCCCeEEEEcCCCCCCCCc
Q psy8430         287 ITASWDRVANLFDVE-----TGTILQSLT-GHD-EEPHI------------LCVSSYYSKVSCDLFQRIQHLDCGTSENP  347 (361)
Q Consensus       287 ~s~~~d~~v~iwd~~-----~~~~~~~~~-~h~-~~v~~------------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~  347 (361)
                      +.+-.+.-|..+|.+     +++.+..+. ++- ..+..            +++|+-     .+..+.+|  |.   +.+
T Consensus       195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQ-----G~~s~~Vy--dr---~~~  264 (355)
T 3amr_A          195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQ-----GNSSYAIY--DR---QGK  264 (355)
T ss_dssp             EEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEG-----GGTEEEEE--ES---STT
T ss_pred             EEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcC-----CCCEEEEE--EC---CCC
Confidence            999999777667754     355665542 111 12332            344443     57899999  76   323


Q ss_pred             ceeeeee
Q psy8430         348 IHSVCVF  354 (361)
Q Consensus       348 ~~~v~~~  354 (361)
                      ...+..|
T Consensus       265 ~~~vg~f  271 (355)
T 3amr_A          265 NKYVADF  271 (355)
T ss_dssp             CCEEEEE
T ss_pred             CcEEEEE
Confidence            4445555

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=94.88  E-value=1.8  Score=42.17  Aligned_cols=114  Identities=11%  Similarity=0.026  Sum_probs=73.8

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCC-----CCCeEEEEEecCCCEEEEEECCCcEEEEecccc
Q psy8430         161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGH-----SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN  235 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h-----~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~  235 (361)
                      ...|.++..+++|.+.+. +. +-+..||..+++........     ...|.++...++|.+.+ |+.++-+..||..++
T Consensus       449 ~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~  525 (781)
T 3v9f_A          449 LLDVRVFYEDKNKKIWIG-TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQ  525 (781)
T ss_dssp             CCCEEEEEECTTSEEEEE-ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCC
T ss_pred             CCeEEEEEECCCCCEEEE-EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCC
Confidence            467999999988865554 44 56888998776543332222     46789999888887655 444344777876543


Q ss_pred             ccccCCCCCCCCCCCCCCCCCceecccccEEEe----CCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE
Q psy8430         236 WECLNNDNDSDLDESKEPDESSITLRTPVKELL----GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI  305 (361)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~  305 (361)
                      .                           ...+.    .....|.++...++|...++. .+|.+..||..+++.
T Consensus       526 ~---------------------------~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~~  571 (781)
T 3v9f_A          526 L---------------------------VRKFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARNFDY  571 (781)
T ss_dssp             E---------------------------EEEECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTTCCC
T ss_pred             e---------------------------EEEccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEECCCCCcE
Confidence            1                           11111    124578899998888766554 467658999887653

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=94.82  E-value=1.7  Score=37.35  Aligned_cols=165  Identities=8%  Similarity=0.031  Sum_probs=93.2

Q ss_pred             eeccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCeEEEEEeCC-------CCCeEEEEE---ecCCCEEEEEE---
Q psy8430         157 FSGHRDGVWDVAVRPGQPVLGSAS-ADRTVRLWSTQTGKCVLQYSGH-------SGSVNSVRF---LPNKDLVLSAS---  222 (361)
Q Consensus       157 l~~h~~~V~~l~~~~~~~~l~s~s-~d~~i~~wd~~~~~~~~~~~~h-------~~~v~~v~~---~~~~~~l~s~~---  222 (361)
                      +.....--.++.|++....|..++ ..++|..||...+.........       ...+..|.|   .|+++++++..   
T Consensus         8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~   87 (334)
T 2p9w_A            8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK   87 (334)
T ss_dssp             ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred             ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence            334445556789988555555554 7899999999766433332211       114579999   68877776543   


Q ss_pred             ----------CCCcEEEEecc---ccccccCCCCCCCCCCCCCCCCCceeccccc---EEEeC-CCCcEEEEEEcCCCCE
Q psy8430         223 ----------GDKSVHIWQAV---INWECLNNDNDSDLDESKEPDESSITLRTPV---KELLG-HSNVVIAADWLSDGEQ  285 (361)
Q Consensus       223 ----------~d~~i~lwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~v~~~~~~~~~~~  285 (361)
                                .+..+..+|+.   ++..+..                 .......   ....+ -......++..++|+.
T Consensus        88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~-----------------~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gna  150 (334)
T 2p9w_A           88 SFNFADQSSHGASSFHSFNLPLSENSKPVWS-----------------VNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNS  150 (334)
T ss_dssp             TTCTTSCCSSSCCEEEEEESSCCTTCCCSEE-----------------EESHHHHHHHHHHHSSCCEEEEEEEECTTSCE
T ss_pred             cccccccccCCCCEEEEEcCCcCCCCCEEEE-----------------ecCccccccccccccccccCCceeEECCCCCE
Confidence                      25778899987   4432110                 0000000   00001 1134788999999999


Q ss_pred             EEEEeCC-CcEEEeeCCCCeEEEEeecCC------CCCeEEEEEcCCC--cc-cCCCeEEEEcCCC
Q psy8430         286 VITASWD-RVANLFDVETGTILQSLTGHD------EEPHILCVSSYYS--KV-SCDLFQRIQHLDC  341 (361)
Q Consensus       286 l~s~~~d-~~v~iwd~~~~~~~~~~~~h~------~~v~~~~~s~s~~--~v-~~dg~i~iW~~d~  341 (361)
                      .++++.. +.|..++.. |+.+..+....      .....+++++...  .| ..+|.+.-+  |+
T Consensus       151 YVt~s~~~~~I~rV~pd-G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~f--D~  213 (334)
T 2p9w_A          151 YVAFALGMPAIARVSAD-GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAF--DV  213 (334)
T ss_dssp             EEEEEESSCEEEEECTT-SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEE--EC
T ss_pred             EEeCCCCCCeEEEEeCC-CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEE--cC
Confidence            9999888 887777765 33333332111      1123455554421  11 136777777  66

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=94.80  E-value=0.94  Score=43.29  Aligned_cols=93  Identities=6%  Similarity=0.018  Sum_probs=57.9

Q ss_pred             eeecCccceeeeEEeec-cCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCeEEEEEeCCCC-CeEEEEEecCCCEEE
Q psy8430         143 SFKTSLLSCYKIRSFSG-HRDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQTGKCVLQYSGHSG-SVNSVRFLPNKDLVL  219 (361)
Q Consensus       143 ~~~~~~~~~~~~~~l~~-h~~~V~~l~~~~~~~~l~s~s~-d~~i~~wd~~~~~~~~~~~~h~~-~v~~v~~~~~~~~l~  219 (361)
                      .+.........+..+.. +.....++++.+++.+++.||. +..+.+||..+.+-...-..+.. .-.+++..+++++++
T Consensus       223 ~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv  302 (656)
T 1k3i_A          223 SWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFT  302 (656)
T ss_dssp             EECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEE
T ss_pred             EEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEE
Confidence            34444455544444432 3333445778889999999984 46899999887643322111111 223455667899999


Q ss_pred             EEE-CC-----CcEEEEecccc
Q psy8430         220 SAS-GD-----KSVHIWQAVIN  235 (361)
Q Consensus       220 s~~-~d-----~~i~lwd~~~~  235 (361)
                      .|+ .+     ..+.+||+.+.
T Consensus       303 ~GG~~~~~~~~~~~e~yd~~t~  324 (656)
T 1k3i_A          303 IGGSWSGGVFEKNGEVYSPSSK  324 (656)
T ss_dssp             ECCCCCSSSCCCCEEEEETTTT
T ss_pred             EeCcccCCcccccceEeCCCCC
Confidence            888 44     46899998764

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=94.78  E-value=1.6  Score=38.02  Aligned_cols=71  Identities=15%  Similarity=0.220  Sum_probs=45.3

Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE--EEEEe---CCCCCeEEEEEecC---CCEE-EEEECC-----C
Q psy8430         160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYS---GHSGSVNSVRFLPN---KDLV-LSASGD-----K  225 (361)
Q Consensus       160 h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~--~~~~~---~h~~~v~~v~~~~~---~~~l-~s~~~d-----~  225 (361)
                      .-..-+.++|.|+|.++++ ..++.|.+++  .+..  +..+.   .-......|+|+|+   +..| ++-..+     .
T Consensus        29 ~l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~  105 (352)
T 2ism_A           29 GLEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN  105 (352)
T ss_dssp             CCSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred             CCCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence            3455779999999985555 5669999998  4542  22111   12457889999998   4444 443332     5


Q ss_pred             cEEEEecc
Q psy8430         226 SVHIWQAV  233 (361)
Q Consensus       226 ~i~lwd~~  233 (361)
                      .|..|+..
T Consensus       106 ~v~r~~~~  113 (352)
T 2ism_A          106 QVVRLRHL  113 (352)
T ss_dssp             EEEEEEEC
T ss_pred             EEEEEEeC
Confidence            66667654

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=94.38  E-value=4.2  Score=39.77  Aligned_cols=116  Identities=10%  Similarity=-0.068  Sum_probs=75.5

Q ss_pred             cCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEE-EEEECC-CcEEEEeccccc
Q psy8430         160 HRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV-LSASGD-KSVHIWQAVINW  236 (361)
Q Consensus       160 h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~~~d-~~i~lwd~~~~~  236 (361)
                      .......|++++.+. ++++-...+.|.+.++........+.........|+++|....| ++-..+ +.|...++... 
T Consensus       469 ~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~-  547 (791)
T 3m0c_C          469 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-  547 (791)
T ss_dssp             SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-
T ss_pred             CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC-
Confidence            445567899998664 55555667899999987554333334445678999999975544 443333 67777776432 


Q ss_pred             cccCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEeeCCC
Q psy8430         237 ECLNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASW-DRVANLFDVET  302 (361)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd~~~  302 (361)
                                                ....+ ...-.....|++++.+..|+.+.. .+.|..+|+..
T Consensus       548 --------------------------~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG  589 (791)
T 3m0c_C          548 --------------------------DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG  589 (791)
T ss_dssp             --------------------------CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             --------------------------ceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence                                      12222 223357889999987777777654 46788888864

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=94.26  E-value=2.1  Score=38.85  Aligned_cols=55  Identities=11%  Similarity=0.153  Sum_probs=37.2

Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEE--EEEeC------CCCCeEEEEEecC
Q psy8430         160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV--LQYSG------HSGSVNSVRFLPN  214 (361)
Q Consensus       160 h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~--~~~~~------h~~~v~~v~~~~~  214 (361)
                      .-...+.++|.|+|+++++-...+.|++++..++...  ..+..      -......|+|+|+
T Consensus        25 ~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd   87 (454)
T 1cru_A           25 NLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (454)
T ss_dssp             CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence            3456789999999987777554457888886556432  22221      2356779999995

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=94.22  E-value=0.16  Score=40.93  Aligned_cols=112  Identities=10%  Similarity=-0.058  Sum_probs=64.3

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEE------EEEe--CCCCCeEEEEEecCCCEEEEEECCCcEEEEecc
Q psy8430         162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV------LQYS--GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV  233 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~------~~~~--~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~  233 (361)
                      ..+.+++|+|+|.+.+.  .+|.+.-.+..++...      ..+-  +-.. -.++.|.|+|.+.++  .||.|.-++..
T Consensus        41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP  115 (236)
T 1tl2_A           41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPP  115 (236)
T ss_dssp             TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred             ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence            36779999999986666  6676655555432110      1110  1111 478899999988877  56888777642


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEee
Q psy8430         234 INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD  299 (361)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd  299 (361)
                      +...                   ..........-.+--..+..+.+.|+|...+..  |+.++-+.
T Consensus       116 ~~~~-------------------~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~  160 (236)
T 1tl2_A          116 QSDT-------------------DNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKAL  160 (236)
T ss_dssp             CSTT-------------------CCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEEC
T ss_pred             cCCC-------------------CceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecC
Confidence            2100                   001111111112222467899999999766666  77765443

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=94.17  E-value=2.4  Score=36.19  Aligned_cols=154  Identities=10%  Similarity=-0.086  Sum_probs=89.4

Q ss_pred             CCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE-CC-CcEEEEeccccccc
Q psy8430         162 DGVWDVAVRPGQ-PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GD-KSVHIWQAVINWEC  238 (361)
Q Consensus       162 ~~V~~l~~~~~~-~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d-~~i~lwd~~~~~~~  238 (361)
                      .....+++++.+ ++.++-...+.|.+++.........+.........++++|.+..++.+. .. +.|...++...   
T Consensus        77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~---  153 (316)
T 1ijq_A           77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV---  153 (316)
T ss_dssp             SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---
T ss_pred             CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC---
Confidence            456789998744 4555556778999999875433333333446788999998655544443 33 67777766422   


Q ss_pred             cCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEeeCCCCeEEEEeec-C--C
Q psy8430         239 LNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTG-H--D  313 (361)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~-h--~  313 (361)
                                              ....+ ...-.....++++|++..|+.+. ..+.|..+|+.. .....+.. .  -
T Consensus       154 ------------------------~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg-~~~~~~~~~~~~~  208 (316)
T 1ijq_A          154 ------------------------DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRL  208 (316)
T ss_dssp             ------------------------CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTT
T ss_pred             ------------------------CeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC-CceEEEeecCCcc
Confidence                                    11122 12345678999999877776665 456899999873 33333321 1  1


Q ss_pred             CCCeEEEEEcCCCccc--CCCeEEEEcCCCCCCC
Q psy8430         314 EEPHILCVSSYYSKVS--CDLFQRIQHLDCGTSE  345 (361)
Q Consensus       314 ~~v~~~~~s~s~~~v~--~dg~i~iW~~d~~~~~  345 (361)
                      .....+.+..+.++++  ..+.|..+  |..+++
T Consensus       209 ~~P~giav~~~~ly~~d~~~~~V~~~--~~~~g~  240 (316)
T 1ijq_A          209 AHPFSLAVFEDKVFWTDIINEAIFSA--NRLTGS  240 (316)
T ss_dssp             SSEEEEEEETTEEEEEETTTTEEEEE--ETTTCC
T ss_pred             CCcEEEEEECCEEEEEECCCCeEEEE--eCCCCc
Confidence            1122333333333321  56777777  654443

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=94.16  E-value=2.5  Score=36.32  Aligned_cols=151  Identities=9%  Similarity=-0.036  Sum_probs=83.7

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeC--CCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccc
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWST--QTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW  236 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~--~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~  236 (361)
                      ++...+..+.+.+++.+++.+...+..+-+|-  .+.+.+.  ......+..+.+.+++..+ .++.+|.+.+++...+.
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~  236 (327)
T 2xbg_A          160 EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSE  236 (327)
T ss_dssp             SCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEE
T ss_pred             CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCC
Confidence            45667899999999887776654444444552  2333332  2456788999999887655 45567877776422111


Q ss_pred             cccCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec---C
Q psy8430         237 ECLNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG---H  312 (361)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~---h  312 (361)
                      .                       +..+..- ..+...+.++.+.+++..++++. ++.+ ++....|+.-..+..   .
T Consensus       237 t-----------------------W~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~  291 (327)
T 2xbg_A          237 N-----------------------WGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKV  291 (327)
T ss_dssp             E-----------------------ECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTS
T ss_pred             e-----------------------eEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCC
Confidence            0                       0011000 01223578888988777666654 6766 344444544333331   2


Q ss_pred             CCCCeEEEEEcC--CCcccCCCeEEEE
Q psy8430         313 DEEPHILCVSSY--YSKVSCDLFQRIQ  337 (361)
Q Consensus       313 ~~~v~~~~~s~s--~~~v~~dg~i~iW  337 (361)
                      ...+..+.+...  ...++.+|.|.-+
T Consensus       292 ~~~~~~v~~~~~~~~~~~G~~G~i~~~  318 (327)
T 2xbg_A          292 PSNFYKILFFSPDQGFILGQKGILLRY  318 (327)
T ss_dssp             SSCCCEEEEEETTEEEEECSTTEEEEE
T ss_pred             CCCeEEEEEECCCceEEEcCCceEEEE
Confidence            234455444322  2234578877666

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=93.93  E-value=2.2  Score=38.06  Aligned_cols=116  Identities=11%  Similarity=0.102  Sum_probs=69.7

Q ss_pred             CCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCC----CCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCC
Q psy8430         171 PGQPVLGSASADRTVRLWSTQTGKCVLQYSGH----SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSD  246 (361)
Q Consensus       171 ~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h----~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~  246 (361)
                      .+|.-++.+- ++.||.-++..+..-+.+...    -..|..+..+|+|++||..+ +..|.|-.+..+.....      
T Consensus        30 ~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~------  101 (452)
T 3pbp_A           30 QNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVE------  101 (452)
T ss_dssp             TTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCC------
T ss_pred             cCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCc------
Confidence            3454444432 467887777643222233321    23578899999999988774 66888887752211000      


Q ss_pred             CCCCCCCCCCceecccccEEEe------CCCCcEEEEEEcC---CCCEEEEEeCCCcEEEeeCCC
Q psy8430         247 LDESKEPDESSITLRTPVKELL------GHSNVVIAADWLS---DGEQVITASWDRVANLFDVET  302 (361)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~---~~~~l~s~~~d~~v~iwd~~~  302 (361)
                              .......-..+.+.      ....+|..+.|||   .+..|++-..|+.|++||+..
T Consensus       102 --------~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~  158 (452)
T 3pbp_A          102 --------DVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN  158 (452)
T ss_dssp             --------CHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred             --------ccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence                    00000000111221      1357899999999   466899999999999999985

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=93.92  E-value=0.91  Score=40.93  Aligned_cols=140  Identities=9%  Similarity=0.004  Sum_probs=76.6

Q ss_pred             CCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEE-e-CCCCCeEEEEEecCCCEE-EEEECCCcEEEEecccccc
Q psy8430         162 DGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQY-S-GHSGSVNSVRFLPNKDLV-LSASGDKSVHIWQAVINWE  237 (361)
Q Consensus       162 ~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~-~-~h~~~v~~v~~~~~~~~l-~s~~~d~~i~lwd~~~~~~  237 (361)
                      .....++++| +|.++++-..++.|+.+|..++.....+ . +....-..++|+|+++.| ++-...+.|..++......
T Consensus       228 ~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~  307 (433)
T 4hw6_A          228 RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETG  307 (433)
T ss_dssp             SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTC
T ss_pred             CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCc
Confidence            3346688999 7777767667789999999877652332 2 122334579999999854 4555567899887642110


Q ss_pred             ccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEE---------cCCCCEEEEEeCCCcEEEeeCCCCeEEEE
Q psy8430         238 CLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADW---------LSDGEQVITASWDRVANLFDVETGTILQS  308 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---------~~~~~~l~s~~~d~~v~iwd~~~~~~~~~  308 (361)
                      ......  ....  ..........   ......-.....+++         .++|.++++-...+.|+.++. +|. +.+
T Consensus       308 ~~~~~~--~~ag--~~g~~g~~dg---~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~-v~t  378 (433)
T 4hw6_A          308 KLAVPY--IVCG--QHSSPGWVDG---MGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGR-VTT  378 (433)
T ss_dssp             CBCCCE--EEEE--CTTCCCCBCE---EGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSE-EEE
T ss_pred             ccCcEE--EEEe--cCCCCccCCC---cccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCC-EEE
Confidence            000000  0000  0000000000   000011234667888         677777777667788999985 564 444


Q ss_pred             ee
Q psy8430         309 LT  310 (361)
Q Consensus       309 ~~  310 (361)
                      +.
T Consensus       379 ~~  380 (433)
T 4hw6_A          379 YA  380 (433)
T ss_dssp             EE
T ss_pred             EE
Confidence            44

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=93.79  E-value=0.57  Score=45.21  Aligned_cols=143  Identities=10%  Similarity=-0.060  Sum_probs=79.8

Q ss_pred             eEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC-EEEEEECC-CcEEEEeccccccccC
Q psy8430         164 VWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSASGD-KSVHIWQAVINWECLN  240 (361)
Q Consensus       164 V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d-~~i~lwd~~~~~~~~~  240 (361)
                      ...|++++ .+.++++-...+.|.++++........+.........|+++|.+. ++++-... +.|..+++...     
T Consensus       455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~-----  529 (699)
T 1n7d_A          455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-----  529 (699)
T ss_dssp             CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC-----
T ss_pred             cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC-----
Confidence            45678875 444555555678899999865443333332334567888988544 44443222 56666655321     


Q ss_pred             CCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEE-eCCCcEEEeeCCCCeEEEEee------cC
Q psy8430         241 NDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITA-SWDRVANLFDVETGTILQSLT------GH  312 (361)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~-~~d~~v~iwd~~~~~~~~~~~------~h  312 (361)
                                            ....+ ...-.....|+|+|++..|+.+ ...+.|.++|+... ....+.      .|
T Consensus       530 ----------------------~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~-~~~~~~~~~~~~~~  586 (699)
T 1n7d_A          530 ----------------------DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAH  586 (699)
T ss_dssp             ----------------------CCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS-CCEEECCCSSSCSS
T ss_pred             ----------------------CeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC-ceEEEEecCCcCCC
Confidence                                  11111 1122355678999876655554 45677999998643 222222      12


Q ss_pred             CCCCeE----EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         313 DEEPHI----LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       313 ~~~v~~----~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      ...+..    ++++..     ..+.|..+  |.
T Consensus       587 P~glavd~~~lywtd~-----~~~~V~~~--d~  612 (699)
T 1n7d_A          587 PFSLAVFEDKVFWTDI-----INEAIFSA--NR  612 (699)
T ss_dssp             CCCCEEETTEEEEECS-----TTTCEEEE--ET
T ss_pred             ceEeEEECCEEEEEeC-----CCCeEEEE--Ec
Confidence            222221    555555     67788888  55

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=93.44  E-value=0.95  Score=45.34  Aligned_cols=39  Identities=21%  Similarity=0.327  Sum_probs=34.5

Q ss_pred             CcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430         272 NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       272 ~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~  310 (361)
                      ..+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus       236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d  274 (950)
T 4gq2_M          236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE  274 (950)
T ss_dssp             TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred             ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence            357778888899999999999999999999999998764

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=93.17  E-value=3.7  Score=35.14  Aligned_cols=154  Identities=8%  Similarity=-0.087  Sum_probs=88.2

Q ss_pred             CCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE-C-CCcEEEEeccccccc
Q psy8430         162 DGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-G-DKSVHIWQAVINWEC  238 (361)
Q Consensus       162 ~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~-d~~i~lwd~~~~~~~  238 (361)
                      .....+++++ .+.++++-...+.|.++++........+.........+++.|.+..++.+. . .+.|...++...   
T Consensus        79 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~---  155 (318)
T 3sov_A           79 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS---  155 (318)
T ss_dssp             SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC---
T ss_pred             CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC---
Confidence            4566789987 455556656678999999865433333334456788999998655544444 2 467777765422   


Q ss_pred             cCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEeeCCCCeEEEEeec-CCCC
Q psy8430         239 LNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTG-HDEE  315 (361)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~-h~~~  315 (361)
                                              ....+ ...-.....++|+|++..|+.+. ..+.|..+|+.. .....+.. .-..
T Consensus       156 ------------------------~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~  210 (318)
T 3sov_A          156 ------------------------SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG-TNRQAVVKGSLPH  210 (318)
T ss_dssp             ------------------------SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEECSCCSC
T ss_pred             ------------------------CeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC-CceEEEecCCCCC
Confidence                                    11122 12234678999999777776665 457799999863 32233321 2222


Q ss_pred             CeEEEEEcCCCccc--CCCeEEEEcCCCCCCC
Q psy8430         316 PHILCVSSYYSKVS--CDLFQRIQHLDCGTSE  345 (361)
Q Consensus       316 v~~~~~s~s~~~v~--~dg~i~iW~~d~~~~~  345 (361)
                      ...+.+....++++  ..+.|..+  |..+++
T Consensus       211 P~glav~~~~lywtd~~~~~V~~~--~~~~G~  240 (318)
T 3sov_A          211 PFALTLFEDILYWTDWSTHSILAC--NKYTGE  240 (318)
T ss_dssp             EEEEEEETTEEEEEETTTTEEEEE--ETTTCC
T ss_pred             ceEEEEeCCEEEEEecCCCeEEEE--ECCCCC
Confidence            22222222222221  66777777  654443

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=92.64  E-value=4  Score=37.38  Aligned_cols=115  Identities=10%  Similarity=0.028  Sum_probs=68.0

Q ss_pred             CeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCC---CCCeEEEEE-------ecCCCEEEEEECCC-c---
Q psy8430         163 GVWDVAVRPG--QPVLGSASADRTVRLWSTQTGKCVLQYSGH---SGSVNSVRF-------LPNKDLVLSASGDK-S---  226 (361)
Q Consensus       163 ~V~~l~~~~~--~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h---~~~v~~v~~-------~~~~~~l~s~~~d~-~---  226 (361)
                      ....|+|+|.  ++++++-...+.|++.|...+........-   ......|+|       ++++..++.+...+ .   
T Consensus       140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~  219 (496)
T 3kya_A          140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE  219 (496)
T ss_dssp             SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred             CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence            3568999983  445555555577999998877654433321   235899999       99999666665543 2   


Q ss_pred             ---EEEEeccccccccCCCCCCCCCCCCCCCCCceec---ccccEEEeCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEee
Q psy8430         227 ---VHIWQAVINWECLNNDNDSDLDESKEPDESSITL---RTPVKELLGHSNVVIAADWLSD-GEQVITASWDRVANLFD  299 (361)
Q Consensus       227 ---i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~v~iwd  299 (361)
                         |.+++......                    +..   ...+..+    .....++++|+ +.++++-..++.|..+|
T Consensus       220 ~~~V~~i~r~~~G~--------------------~~~~~~~~~v~~~----~~p~giavdp~~g~LYvtd~~~g~V~r~d  275 (496)
T 3kya_A          220 SPSVYIIKRNADGT--------------------FDDRSDIQLIAAY----KQCNGATIHPINGELYFNSYEKGQVFRLD  275 (496)
T ss_dssp             EEEEEEEECCTTSC--------------------CSTTSCEEEEEEE----SCCCCEEECTTTCCEEEEETTTTEEEEEC
T ss_pred             CceEEEEecCCCCc--------------------eeecccceeeccC----CCceEEEEcCCCCeEEEEECCCCEEEEEe
Confidence               55554322000                    000   0111121    23456788995 44455566778899999


Q ss_pred             CC
Q psy8430         300 VE  301 (361)
Q Consensus       300 ~~  301 (361)
                      +.
T Consensus       276 ~~  277 (496)
T 3kya_A          276 LV  277 (496)
T ss_dssp             HH
T ss_pred             cc
Confidence            87

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=92.50  E-value=2.8  Score=36.51  Aligned_cols=72  Identities=19%  Similarity=0.147  Sum_probs=44.7

Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe-EEEEEe---CCCCCeEEEEEecC----CCEEEEEEC---C----
Q psy8430         160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-CVLQYS---GHSGSVNSVRFLPN----KDLVLSASG---D----  224 (361)
Q Consensus       160 h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~-~~~~~~---~h~~~v~~v~~~~~----~~~l~s~~~---d----  224 (361)
                      .-...+.++|.|+|.+++ +..++.|++++ ..++ .+..+.   .-......|+|+|+    +.+.++-+.   +    
T Consensus        27 ~l~~P~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~  104 (354)
T 3a9g_A           27 DLEVPWSIAPLGGGRYLV-TERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR  104 (354)
T ss_dssp             SCSCEEEEEEEETTEEEE-EETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred             CCCCCeEEEEcCCCeEEE-EeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence            345678999999997555 45669999997 3554 222211   12356889999997    444444332   3    


Q ss_pred             CcEEEEecc
Q psy8430         225 KSVHIWQAV  233 (361)
Q Consensus       225 ~~i~lwd~~  233 (361)
                      ..|..|+..
T Consensus       105 ~~v~r~~~~  113 (354)
T 3a9g_A          105 NRVIRGRLD  113 (354)
T ss_dssp             EEEEEEEEC
T ss_pred             eEEEEEEEC
Confidence            456666653

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=92.45  E-value=5  Score=34.83  Aligned_cols=80  Identities=16%  Similarity=0.249  Sum_probs=51.5

Q ss_pred             eeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEE--EEE----eCCCCCeEEEEEecC----CCEEEEEE
Q psy8430         153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV--LQY----SGHSGSVNSVRFLPN----KDLVLSAS  222 (361)
Q Consensus       153 ~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~--~~~----~~h~~~v~~v~~~~~----~~~l~s~~  222 (361)
                      .+..+...-..-+.++|.|+|.++++--..|.|++++...++..  ..+    ..-......|+|+|+    +.+.++-+
T Consensus        23 ~~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt  102 (347)
T 3das_A           23 VLRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFT  102 (347)
T ss_dssp             EEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred             eeEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEe
Confidence            34445556677899999999988777766899999987666432  212    123457889999995    44444333


Q ss_pred             --CCCcEEEEec
Q psy8430         223 --GDKSVHIWQA  232 (361)
Q Consensus       223 --~d~~i~lwd~  232 (361)
                        .+..|.-|.+
T Consensus       103 ~~~~~~v~R~~~  114 (347)
T 3das_A          103 SASDNRIVRMLY  114 (347)
T ss_dssp             CSSSEEEEEEEB
T ss_pred             cCCCCEEEEEEe
Confidence              3344444444

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=91.97  E-value=9.1  Score=38.32  Aligned_cols=36  Identities=17%  Similarity=0.161  Sum_probs=30.8

Q ss_pred             CeEEEEEecCCCEEEEEECCCcEEEEeccccccccC
Q psy8430         205 SVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLN  240 (361)
Q Consensus       205 ~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~  240 (361)
                      .+.+++..++..++++.+.|+++|+|++.++..+..
T Consensus       237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t  272 (950)
T 4gq2_M          237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET  272 (950)
T ss_dssp             CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred             eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence            567778888888999999999999999999876554

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=91.79  E-value=6.1  Score=34.41  Aligned_cols=135  Identities=15%  Similarity=0.213  Sum_probs=81.2

Q ss_pred             cceeeeEEeeccC-CCeEEEEEcCCCCEEEEEeC-----------------CCcEEEEeCCCCeEEEEEeCCCCCeEEEE
Q psy8430         149 LSCYKIRSFSGHR-DGVWDVAVRPGQPVLGSASA-----------------DRTVRLWSTQTGKCVLQYSGHSGSVNSVR  210 (361)
Q Consensus       149 ~~~~~~~~l~~h~-~~V~~l~~~~~~~~l~s~s~-----------------d~~i~~wd~~~~~~~~~~~~h~~~v~~v~  210 (361)
                      .....+.++.+.. ...+++.+.++|.+.++...                 .|.|.-+|.  ++...... .-...+.++
T Consensus       151 ~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~-~l~~pNGia  227 (355)
T 3sre_A          151 KSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAE-GFDFANGIN  227 (355)
T ss_dssp             TEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEE-EESSEEEEE
T ss_pred             CEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeec-CCcccCcce
Confidence            4445666666543 45789999999987777541                 233444443  43322222 345678999


Q ss_pred             EecCCCEEEEEE-CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEE
Q psy8430         211 FLPNKDLVLSAS-GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVIT  288 (361)
Q Consensus       211 ~~~~~~~l~s~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s  288 (361)
                      |+|+++.++.+. ..+.|..|++.....                    ..   ....+ ...+....+++.+ +|.+.++
T Consensus       228 ~spDg~~lYvadt~~~~I~~~~~~~~g~--------------------l~---~~~~~-~~~g~PDGi~vD~e~G~lwva  283 (355)
T 3sre_A          228 ISPDGKYVYIAELLAHKIHVYEKHANWT--------------------LT---PLRVL-SFDTLVDNISVDPVTGDLWVG  283 (355)
T ss_dssp             ECTTSSEEEEEEGGGTEEEEEEECTTSC--------------------EE---EEEEE-ECSSEEEEEEECTTTCCEEEE
T ss_pred             ECCCCCEEEEEeCCCCeEEEEEECCCCc--------------------Ee---cCEEE-eCCCCCceEEEeCCCCcEEEE
Confidence            999998776654 567899998753211                    00   11122 2246678899999 5998887


Q ss_pred             EeCC-CcEEEeeCC--CCeEEEEee
Q psy8430         289 ASWD-RVANLFDVE--TGTILQSLT  310 (361)
Q Consensus       289 ~~~d-~~v~iwd~~--~~~~~~~~~  310 (361)
                      +..+ +.|..||..  .+..+.++.
T Consensus       284 ~~~~g~~v~~~~P~~~~~s~v~rI~  308 (355)
T 3sre_A          284 CHPNGMRIFFYDAENPPGSEVLRIQ  308 (355)
T ss_dssp             EESCHHHHHSCCTTSCCCEEEEEEE
T ss_pred             ecCCceEEEEECCCCCCCCEEEEEE
Confidence            7654 345555544  244555554

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=91.29  E-value=0.38  Score=41.72  Aligned_cols=116  Identities=13%  Similarity=0.136  Sum_probs=68.8

Q ss_pred             CEEEEEeCCCcEEEEeCCCCeEEEEEeCC-CCCeEEEEEe--cCCCEEEEE--ECCCcEEEEeccccccccCCCCCCCCC
Q psy8430         174 PVLGSASADRTVRLWSTQTGKCVLQYSGH-SGSVNSVRFL--PNKDLVLSA--SGDKSVHIWQAVINWECLNNDNDSDLD  248 (361)
Q Consensus       174 ~~l~s~s~d~~i~~wd~~~~~~~~~~~~h-~~~v~~v~~~--~~~~~l~s~--~~d~~i~lwd~~~~~~~~~~~~~~~~~  248 (361)
                      ..++.++.||.|...|..+|+.+-.+... ..++....-.  +.+..++.+  ..||.+..++..++...          
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~----------   80 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK----------   80 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE----------
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE----------
Confidence            37889999999999999999988887643 1222221100  012233333  57899988887655211          


Q ss_pred             CCCCCCCCceecccccEEEeCCCCcEEE---EEE-c----CCCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430         249 ESKEPDESSITLRTPVKELLGHSNVVIA---ADW-L----SDGEQVITASWDRVANLFDVETGTILQSLTG  311 (361)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~-~----~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~  311 (361)
                                 ....+..+. ...++..   ..+ .    ..+..+++|+.+|.+...|+++|+.+..+..
T Consensus        81 -----------~~~~~~~lv-~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~  139 (339)
T 2be1_A           81 -----------LPLSIRQLV-STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP  139 (339)
T ss_dssp             -----------EEEEHHHHH-TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred             -----------eeeccccce-eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence                       000000111 1112221   000 0    1456889999999999999999999887753

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=91.20  E-value=10  Score=35.85  Aligned_cols=115  Identities=7%  Similarity=-0.075  Sum_probs=67.8

Q ss_pred             cCCCeEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCeE-EEEEeCCCCCeEEEEEecCCC-EEEEEECCCcEEEEeccccc
Q psy8430         160 HRDGVWDVAVRPGQPVLGSA-SADRTVRLWSTQTGKC-VLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAVINW  236 (361)
Q Consensus       160 h~~~V~~l~~~~~~~~l~s~-s~d~~i~~wd~~~~~~-~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~lwd~~~~~  236 (361)
                      .-+....++|++.+..|+-+ ...+.|..+++..... ...+..--.....+++.+.+. ++++-...+.|.+.++....
T Consensus        38 ~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~  117 (619)
T 3s94_A           38 GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL  117 (619)
T ss_dssp             CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred             CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC
Confidence            34557799999966655544 4467888888865432 223333336789999998555 45555567889999876431


Q ss_pred             cccCCCCCCCCCCCCCCCCCceecccccEEEe-CCCCcEEEEEEcCCCCEEEEEeC--CCcEEEeeCC
Q psy8430         237 ECLNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITASW--DRVANLFDVE  301 (361)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~--d~~v~iwd~~  301 (361)
                                                 ...+. ..-.....++++|.+.+|+.+..  .+.|...++.
T Consensus       118 ---------------------------~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d  158 (619)
T 3s94_A          118 ---------------------------RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD  158 (619)
T ss_dssp             ---------------------------CEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred             ---------------------------EEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECC
Confidence                                       11221 23344567778886666655553  2455555554

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=90.63  E-value=4.6  Score=36.98  Aligned_cols=122  Identities=10%  Similarity=-0.027  Sum_probs=67.9

Q ss_pred             CeEEEEE-------cCCCCEEEEEeCCC-------cEEEEeCCC-CeEE-----EEEeCCCCCeEEEEEec-CCCEEEEE
Q psy8430         163 GVWDVAV-------RPGQPVLGSASADR-------TVRLWSTQT-GKCV-----LQYSGHSGSVNSVRFLP-NKDLVLSA  221 (361)
Q Consensus       163 ~V~~l~~-------~~~~~~l~s~s~d~-------~i~~wd~~~-~~~~-----~~~~~h~~~v~~v~~~~-~~~~l~s~  221 (361)
                      ....++|       +++|..|+.+...+       .|.+++... +...     ..+.. -.....++++| ++.++++-
T Consensus       187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd  265 (496)
T 3kya_A          187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNS  265 (496)
T ss_dssp             BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEE
T ss_pred             CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEE
Confidence            5789999       99999666665543       255665433 1111     12211 12345778899 45556666


Q ss_pred             ECCCcEEEEecc-------ccccccCCCCCCCCCCCCCCCCCceec--ccccEEEeCCCCcEEEEEEcCCCCEEEEE-eC
Q psy8430         222 SGDKSVHIWQAV-------INWECLNNDNDSDLDESKEPDESSITL--RTPVKELLGHSNVVIAADWLSDGEQVITA-SW  291 (361)
Q Consensus       222 ~~d~~i~lwd~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~  291 (361)
                      ..++.|..+|+.       ++... ....             ....  ...+.. .+.....+.++|+|+|++|+.+ +.
T Consensus       266 ~~~g~V~r~d~~~~~~~~~tg~~~-tp~~-------------~~~~g~~~~l~~-~~~~~~p~~ia~~p~G~~lYvaD~~  330 (496)
T 3kya_A          266 YEKGQVFRLDLVDYFKTIKNGGSW-DPIV-------------KNNPNTFKQLFT-IADPSWEFQIFIHPTGKYAYFGVIN  330 (496)
T ss_dssp             TTTTEEEEECHHHHHHHHHTTCCC-CCBG-------------GGCTTTEEEEEE-CSSSSCCEEEEECTTSSEEEEEETT
T ss_pred             CCCCEEEEEecccccccccCceee-cccc-------------cccccccceeEe-cCCCCCceEEEEcCCCCEEEEEeCC
Confidence            678889999986       23110 0000             0000  001111 1234456889999999965555 45


Q ss_pred             CCcEEEeeC
Q psy8430         292 DRVANLFDV  300 (361)
Q Consensus       292 d~~v~iwd~  300 (361)
                      .+.|+.+|.
T Consensus       331 ~h~I~kid~  339 (496)
T 3kya_A          331 NHYFMRSDY  339 (496)
T ss_dssp             TTEEEEEEE
T ss_pred             CCEEEEEec
Confidence            677888554

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=90.62  E-value=3.3  Score=36.02  Aligned_cols=53  Identities=19%  Similarity=0.273  Sum_probs=34.6

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe-------CCCCCeEEEEEecC
Q psy8430         161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-------GHSGSVNSVRFLPN  214 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~-------~h~~~v~~v~~~~~  214 (361)
                      -...+.++|.|+|+.|+.+...|.|++++.. +.....+.       ........|+|+|+
T Consensus        17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pd   76 (353)
T 2g8s_A           17 LDHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPD   76 (353)
T ss_dssp             ESSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTT
T ss_pred             CCCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCC
Confidence            3457899999999834445567999999853 43211111       12346789999995

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=90.61  E-value=4.2  Score=37.72  Aligned_cols=153  Identities=13%  Similarity=0.025  Sum_probs=91.2

Q ss_pred             CeEEEEEcCCCCEEEEEeC-CCcEEEEeCCC------Ce-------EEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEE
Q psy8430         163 GVWDVAVRPGQPVLGSASA-DRTVRLWSTQT------GK-------CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  228 (361)
Q Consensus       163 ~V~~l~~~~~~~~l~s~s~-d~~i~~wd~~~------~~-------~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~  228 (361)
                      ....+.++|||.+++.++. +.++.++|+..      ++       ...... -.-.....+|.++|....|.--|..|.
T Consensus       324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvv  402 (638)
T 3sbq_A          324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVV  402 (638)
T ss_dssp             SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred             CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEE
Confidence            3456889999997777654 78999999873      11       122233 456678899999995555666899999


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEE-----EEcCCCCEEEEEe---CCCcE-----
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAA-----DWLSDGEQVITAS---WDRVA-----  295 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-----~~~~~~~~l~s~~---~d~~v-----  295 (361)
                      -|++......-.                .......+..+..|-.+-.-.     .-.|+|+||++..   .|+.+     
T Consensus       403 kWni~~a~~~~~----------------g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl  466 (638)
T 3sbq_A          403 KWNMEEAVRAYK----------------GEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPL  466 (638)
T ss_dssp             EEEHHHHHHHHT----------------TCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSS
T ss_pred             EEeccHHHHHhc----------------CccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCC
Confidence            999864311000                000112334444443332211     1256899998875   35444     


Q ss_pred             -----EEeeCCC--CeEEEEeecCCCCCeEEEEEcCCCcccCCCeEEEE
Q psy8430         296 -----NLFDVET--GTILQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQ  337 (361)
Q Consensus       296 -----~iwd~~~--~~~~~~~~~h~~~v~~~~~s~s~~~v~~dg~i~iW  337 (361)
                           .+.|+.-  .+.+.-......+-.++++-.+     .=....+|
T Consensus       467 ~pen~QlidIsGdkM~lv~D~P~~~EPHda~~v~~~-----~i~p~~vy  510 (638)
T 3sbq_A          467 HPENDQLIDISGDEMKLVHDGPTFAEPHDCIMARRD-----QIKTKKIW  510 (638)
T ss_dssp             CCEEEEEEECSSSSCEEEEEEEESSCCCCEEEEEGG-----GCCCCSSC
T ss_pred             CCCcceeEecCCCceEEEecCCCCCCCcceEEecHH-----HcCCccee
Confidence                 6778752  3444444445566666777776     33345567

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=90.48  E-value=7.6  Score=33.13  Aligned_cols=125  Identities=10%  Similarity=-0.049  Sum_probs=76.7

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEe--CCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEE-ECCCcEEEEecccc
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSAS--ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA-SGDKSVHIWQAVIN  235 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s--~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~-~~d~~i~lwd~~~~  235 (361)
                      ........++++|.+..|+-+.  ..+.|...++............-...+.++|+|++..|..+ +..+.|..+|+...
T Consensus       119 ~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~  198 (318)
T 3sov_A          119 QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT  198 (318)
T ss_dssp             SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC
Confidence            3445678999998655555554  25778888875332222222334567899999966655544 55678999887532


Q ss_pred             ccccCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430         236 WECLNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG  311 (361)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~  311 (361)
                                                 ....+ .+......++++. .+..+++-...+.|..+|..+|+....+..
T Consensus       199 ---------------------------~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~  247 (318)
T 3sov_A          199 ---------------------------NRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSILACNKYTGEGLREIHS  247 (318)
T ss_dssp             ---------------------------SCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred             ---------------------------ceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEEEEECCCCCceEEEeC
Confidence                                       11111 2234456677775 334445555567899999888876666654

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=90.36  E-value=12  Score=35.36  Aligned_cols=155  Identities=14%  Similarity=0.026  Sum_probs=91.7

Q ss_pred             CCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEE-eCCCCCeEEEEEec-CCCEEEEEECCC--cEEEEecccc
Q psy8430         161 RDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQY-SGHSGSVNSVRFLP-NKDLVLSASGDK--SVHIWQAVIN  235 (361)
Q Consensus       161 ~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~-~~h~~~v~~v~~~~-~~~~l~s~~~d~--~i~lwd~~~~  235 (361)
                      ...+..++++..+. +..+-+..+.|.+.++. |+....+ .........|+++| .|.++++-....  .|...++...
T Consensus       388 ~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~-G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~  466 (628)
T 4a0p_A          388 EIQPYDLSIDIYSRYIYWTCEATNVINVTRLD-GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGT  466 (628)
T ss_dssp             CCCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSC
T ss_pred             cCCcceEEeeccCCeEEEEcCCCCEEEEEECC-CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCC
Confidence            34678999999765 55566677889999985 5444343 33456789999999 666666654333  4444444311


Q ss_pred             ccccCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEeeCCCCeEEEEee-cC
Q psy8430         236 WECLNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASW-DRVANLFDVETGTILQSLT-GH  312 (361)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd~~~~~~~~~~~-~h  312 (361)
                                                 ....+ ...-.....+++++.+..|+.+.. .+.|...|+. |.....+. ..
T Consensus       467 ---------------------------~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~d-G~~r~~~~~~~  518 (628)
T 4a0p_A          467 ---------------------------EREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLS-GANRIVLEDSN  518 (628)
T ss_dssp             ---------------------------SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEECSS
T ss_pred             ---------------------------CcEEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCC-CCceEEEEcCC
Confidence                                       11222 223446789999998777777655 5778889985 44444443 22


Q ss_pred             CCCCeEEEEEcCCCccc--CCCeEEEEcCCCCCCCC
Q psy8430         313 DEEPHILCVSSYYSKVS--CDLFQRIQHLDCGTSEN  346 (361)
Q Consensus       313 ~~~v~~~~~s~s~~~v~--~dg~i~iW~~d~~~~~~  346 (361)
                      -.....+.+..+.++++  ..+.|...  |..+++.
T Consensus       519 ~~~P~glav~~~~ly~tD~~~~~i~~~--~k~~G~~  552 (628)
T 4a0p_A          519 ILQPVGLTVFENWLYWIDKQQQMIEKI--DMTGREG  552 (628)
T ss_dssp             CSCEEEEEEETTEEEEEETTTTEEEEE--ETTSSSC
T ss_pred             CCCcEEEEEECCEEEEEECCCCeEEEE--ECcCCCC
Confidence            22233444444434432  44555555  6655443

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=89.67  E-value=8.1  Score=32.28  Aligned_cols=24  Identities=13%  Similarity=0.213  Sum_probs=17.3

Q ss_pred             CCCEEEEEeCC-----CcEEEeeCCCCeE
Q psy8430         282 DGEQVITASWD-----RVANLFDVETGTI  305 (361)
Q Consensus       282 ~~~~l~s~~~d-----~~v~iwd~~~~~~  305 (361)
                      ++..++.|+.+     ..+.+||+.+.+-
T Consensus       204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W  232 (302)
T 2xn4_A          204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAW  232 (302)
T ss_dssp             TTEEEEECCBSSSSBCCCEEEEETTTTEE
T ss_pred             CCEEEEECCCCCCcccceEEEEeCCCCCE
Confidence            56777777654     3688999987654

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=89.10  E-value=0.83  Score=44.06  Aligned_cols=121  Identities=11%  Similarity=-0.019  Sum_probs=69.8

Q ss_pred             CCeEEEEEcCCCCEEEEEe-CC-CcEEEEeCCCCeEEEEE-eCCCCCeEEEEEecCCC-EEEEEECCCcEEEEecccccc
Q psy8430         162 DGVWDVAVRPGQPVLGSAS-AD-RTVRLWSTQTGKCVLQY-SGHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAVINWE  237 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s-~d-~~i~~wd~~~~~~~~~~-~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~lwd~~~~~~  237 (361)
                      .....|+++|.+.+|+.+. .. +.|..+++.... ...+ ...-...+.|+|+|++. ++++-+..+.|..+++.... 
T Consensus       496 ~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~-  573 (699)
T 1n7d_A          496 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-  573 (699)
T ss_dssp             CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC-
T ss_pred             CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc-
Confidence            4467788998655444433 22 678777765332 2222 22234567899998655 45555566789999875321 


Q ss_pred             ccCCCCCCCCCCCCCCCCCceecccccEEEe---CCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430         238 CLNNDNDSDLDESKEPDESSITLRTPVKELL---GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG  311 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~  311 (361)
                                                ...+.   .......+|++..+ ..+++....+.|..+|..+|+.+..+..
T Consensus       574 --------------------------~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~  623 (699)
T 1n7d_A          574 --------------------------RKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLAE  623 (699)
T ss_dssp             --------------------------CEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCCT
T ss_pred             --------------------------eEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEeec
Confidence                                      11111   11123344555433 3444445567899999888888777753

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=88.71  E-value=6.7  Score=32.76  Aligned_cols=89  Identities=12%  Similarity=0.165  Sum_probs=44.8

Q ss_pred             eeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCeEEEE--EeCCCCCeEEEEEecCC
Q psy8430         143 SFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD-----RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNK  215 (361)
Q Consensus       143 ~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d-----~~i~~wd~~~~~~~~~--~~~h~~~v~~v~~~~~~  215 (361)
                      .+.....+...+..+......-.++.+  ++.+++.|+.+     ..+.+||+.+.+-...  +......-..+.+  ++
T Consensus       132 ~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~  207 (301)
T 2vpj_A          132 RYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--ND  207 (301)
T ss_dssp             EEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT
T ss_pred             EEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CC
Confidence            344444455544444322222222223  56677777654     4588899877643322  1111111122222  56


Q ss_pred             CEEEEEECC-----CcEEEEecccc
Q psy8430         216 DLVLSASGD-----KSVHIWQAVIN  235 (361)
Q Consensus       216 ~~l~s~~~d-----~~i~lwd~~~~  235 (361)
                      .+++.|+.+     ..+.+||+.+.
T Consensus       208 ~i~v~GG~~~~~~~~~v~~yd~~~~  232 (301)
T 2vpj_A          208 HIYVVGGFDGTAHLSSVEAYNIRTD  232 (301)
T ss_dssp             EEEEECCBCSSSBCCCEEEEETTTT
T ss_pred             EEEEEeCCCCCcccceEEEEeCCCC
Confidence            677777654     35788887654

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=88.02  E-value=26  Score=35.94  Aligned_cols=132  Identities=14%  Similarity=0.073  Sum_probs=74.8

Q ss_pred             cEEEEeCCCCeEEEEEeCC-CCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceeccc
Q psy8430         184 TVRLWSTQTGKCVLQYSGH-SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRT  262 (361)
Q Consensus       184 ~i~~wd~~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (361)
                      .|++.+...+..+..|... ...|...+.+  +.+++.++ ++.+.++++..+..                     .   
T Consensus       493 ~Irli~~~~~~~~~~w~~p~~~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L---------------------~---  545 (1158)
T 3ei3_A          493 SVRLVSQEPKALVSEWKEPQAKNISVASCN--SSQVVVAV-GRALYYLQIHPQEL---------------------R---  545 (1158)
T ss_dssp             CEEEEESSSCCEEEEECCTTCCCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEE---------------------E---
T ss_pred             EEEEEECCCCeEEEEEECCCCCEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCce---------------------e---
Confidence            4666666555566667643 3356666654  34555555 67788887653210                     0   


Q ss_pred             ccEEEeCCCCcEEEEEEcCC------CCEEEEEeC-CCcEEEeeCCCCeEEEEeecCC-CCCeEEEEE--cC--CCcc-c
Q psy8430         263 PVKELLGHSNVVIAADWLSD------GEQVITASW-DRVANLFDVETGTILQSLTGHD-EEPHILCVS--SY--YSKV-S  329 (361)
Q Consensus       263 ~~~~~~~~~~~v~~~~~~~~------~~~l~s~~~-d~~v~iwd~~~~~~~~~~~~h~-~~v~~~~~s--~s--~~~v-~  329 (361)
                      ..... .-...|.++++.|.      +.+++.|.. |++++|+++.+.+.+....-.. ....++++.  .+  +..+ -
T Consensus       546 ~~~~~-~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl  624 (1158)
T 3ei3_A          546 QISHT-EMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCAL  624 (1158)
T ss_dssp             EEEEE-ECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEE
T ss_pred             eeccc-CCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEe
Confidence            11111 12457899998763      479999997 9999999999876664433211 222222221  11  1111 1


Q ss_pred             CCCeEEEEcCCCCC
Q psy8430         330 CDLFQRIQHLDCGT  343 (361)
Q Consensus       330 ~dg~i~iW~~d~~~  343 (361)
                      .||.+--+.+|..+
T Consensus       625 ~dG~l~~~~~d~~t  638 (1158)
T 3ei3_A          625 GDGALFYFGLNIET  638 (1158)
T ss_dssp             TTSEEEEEEECTTT
T ss_pred             CCCeEEEEEEcCCC
Confidence            68887666556543

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=87.88  E-value=19  Score=34.14  Aligned_cols=155  Identities=7%  Similarity=-0.068  Sum_probs=89.6

Q ss_pred             CCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE-C-CCcEEEEeccccccc
Q psy8430         162 DGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-G-DKSVHIWQAVINWEC  238 (361)
Q Consensus       162 ~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~-d~~i~lwd~~~~~~~  238 (361)
                      .....+++++.+. +.++-...+.|.+.++........+...-.....|+++|....|.-.. . .+.|...++...   
T Consensus        80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~---  156 (628)
T 4a0p_A           80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGS---  156 (628)
T ss_dssp             SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---
T ss_pred             CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCC---
Confidence            4567899987555 555555668899999865433222334456678999998544444333 2 456666665422   


Q ss_pred             cCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEeeCCCCeEEEEeecCCCCCe
Q psy8430         239 LNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-DRVANLFDVETGTILQSLTGHDEEPH  317 (361)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd~~~~~~~~~~~~h~~~v~  317 (361)
                                              ....+...-.....+++++++..|+.+.. .+.|..+|+..... ..+...-....
T Consensus       157 ------------------------~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~  211 (628)
T 4a0p_A          157 ------------------------ERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPF  211 (628)
T ss_dssp             ------------------------SCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEE
T ss_pred             ------------------------ceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCce
Confidence                                    12222234557889999998777776654 56788899864332 33332222223


Q ss_pred             EEEEEcCCCccc--CCCeEEEEcCCCCCCCC
Q psy8430         318 ILCVSSYYSKVS--CDLFQRIQHLDCGTSEN  346 (361)
Q Consensus       318 ~~~~s~s~~~v~--~dg~i~iW~~d~~~~~~  346 (361)
                      .+.+..+.++++  ..+.|...  |..++..
T Consensus       212 glav~~~~ly~tD~~~~~I~~~--dk~tg~~  240 (628)
T 4a0p_A          212 GLTQYQDYIYWTDWSRRSIERA--NKTSGQN  240 (628)
T ss_dssp             EEEEETTEEEEEETTTTEEEEE--ETTTCCS
T ss_pred             EEEEECCEEEEecCCCCEEEEE--ECCCCCc
Confidence            333333333332  56777777  6545443

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=87.38  E-value=16  Score=32.85  Aligned_cols=149  Identities=15%  Similarity=0.128  Sum_probs=90.5

Q ss_pred             ceeeeEEeeccC----CCeEEEEEcCCCCEEEEEeC-------CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC---C
Q psy8430         150 SCYKIRSFSGHR----DGVWDVAVRPGQPVLGSASA-------DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN---K  215 (361)
Q Consensus       150 ~~~~~~~l~~h~----~~V~~l~~~~~~~~l~s~s~-------d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~---~  215 (361)
                      +..+++.+.-|.    ..|..-..++++++++..|-       .|.+.+|..+.+. .+.+.||...-..+...-+   .
T Consensus       135 ~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~  213 (494)
T 1bpo_A          135 ESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEES  213 (494)
T ss_dssp             SCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCSEEEEEEEECTTCSSEE
T ss_pred             CCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheeeeeeeEEEecCCCCCCc
Confidence            335555555553    44666667888887664432       4678899986543 4567777655444433211   1


Q ss_pred             CEEEEEECC---CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEE-E---eCCCCcEEEEEEcCCCCEEEE
Q psy8430         216 DLVLSASGD---KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKE-L---LGHSNVVIAADWLSDGEQVIT  288 (361)
Q Consensus       216 ~~l~s~~~d---~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~v~~~~~~~~~~~l~s  288 (361)
                      ++|+-+...   +.++|-++.....-                  .......... +   ..-.+...++..++....++.
T Consensus       214 ~lf~fa~r~~~g~kLhi~Ei~~~~~~------------------~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyv  275 (494)
T 1bpo_A          214 TLFCFAVRGQAGGKLHIIEVGTPPTG------------------NQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL  275 (494)
T ss_dssp             EEEEEEECSTTCCEEEEEECSCCCTT------------------CCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEE
T ss_pred             eEEEEEEecCCCcEEEEEEcCCCccC------------------CCCccceeeeeeCCcccccCceeEEEecccCCEEEE
Confidence            234444443   68899888532000                  0000000111 1   122456678899999999999


Q ss_pred             EeCCCcEEEeeCCCCeEEEEeecCCCCCe
Q psy8430         289 ASWDRVANLFDVETGTILQSLTGHDEEPH  317 (361)
Q Consensus       289 ~~~d~~v~iwd~~~~~~~~~~~~h~~~v~  317 (361)
                      -+.-|.+++||++||.++..-.-....|.
T Consensus       276 iTK~G~i~lyDleTgt~i~~nrIs~~~iF  304 (494)
T 1bpo_A          276 ITKYGYIHLYDLETGTCIYMNRISGETIF  304 (494)
T ss_dssp             EETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred             EecCceEEEEecccceeeeeecccCCceE
Confidence            99999999999999999887665555553

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=87.29  E-value=12  Score=31.21  Aligned_cols=107  Identities=11%  Similarity=0.091  Sum_probs=54.7

Q ss_pred             CCCEEEEEeCC-----CcEEEEeCCCCeEE--EEEeCCCCCeEEEEEecCCCEEEEEECC-----CcEEEEecccccccc
Q psy8430         172 GQPVLGSASAD-----RTVRLWSTQTGKCV--LQYSGHSGSVNSVRFLPNKDLVLSASGD-----KSVHIWQAVINWECL  239 (361)
Q Consensus       172 ~~~~l~s~s~d-----~~i~~wd~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~~~d-----~~i~lwd~~~~~~~~  239 (361)
                      ++.+++.|+.+     ..+.+||..+.+-.  .........-..+.  .++.+++.|+.+     ..+.+||+.+..   
T Consensus       112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~---  186 (301)
T 2vpj_A          112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGH---  186 (301)
T ss_dssp             TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTE---
T ss_pred             CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCc---
Confidence            46667777654     35888998776432  22221111112222  256677777654     347778875441   


Q ss_pred             CCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEeeCCCCeEE
Q psy8430         240 NNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-----RVANLFDVETGTIL  306 (361)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~  306 (361)
                                        +..   +..+.........+.+  ++..++.|+.+     ..+.+||+.+.+-.
T Consensus       187 ------------------W~~---~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~  235 (301)
T 2vpj_A          187 ------------------WTN---VTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWT  235 (301)
T ss_dssp             ------------------EEE---ECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred             ------------------EEe---CCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEE
Confidence                              111   1011111111222333  56677777654     46899999877543

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=87.14  E-value=6.7  Score=32.83  Aligned_cols=88  Identities=17%  Similarity=0.199  Sum_probs=42.8

Q ss_pred             eecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCC-------CcEEEEeCCCCeEEEE--EeCCCCCeEEEEEecC
Q psy8430         144 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD-------RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPN  214 (361)
Q Consensus       144 ~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d-------~~i~~wd~~~~~~~~~--~~~h~~~v~~v~~~~~  214 (361)
                      +.........+..+........++.+  ++.+++.|+.+       ..+.+||+.+.+-...  +.........+.+  +
T Consensus       129 ~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~  204 (302)
T 2xn4_A          129 YNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--N  204 (302)
T ss_dssp             EETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--T
T ss_pred             EeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--C
Confidence            44444444444433322222222223  45566666543       3588899877643222  1111111122222  5


Q ss_pred             CCEEEEEECCC-----cEEEEecccc
Q psy8430         215 KDLVLSASGDK-----SVHIWQAVIN  235 (361)
Q Consensus       215 ~~~l~s~~~d~-----~i~lwd~~~~  235 (361)
                      +.+++.|+.++     .+.+||+.+.
T Consensus       205 ~~iyv~GG~~~~~~~~~~~~yd~~~~  230 (302)
T 2xn4_A          205 NLLYAVGGHDGPLVRKSVEVYDPTTN  230 (302)
T ss_dssp             TEEEEECCBSSSSBCCCEEEEETTTT
T ss_pred             CEEEEECCCCCCcccceEEEEeCCCC
Confidence            66777776543     5778887654

>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A

Probab=86.63  E-value=3  Score=39.89  Aligned_cols=37  Identities=14%  Similarity=0.187  Sum_probs=30.8

Q ss_pred             cEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430         273 VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG  311 (361)
Q Consensus       273 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~  311 (361)
                      .|.++.+  +..++++-+.|..+|+|++.+++++.+..-
T Consensus       223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL  259 (729)
T 3f7f_A          223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM  259 (729)
T ss_dssp             EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred             eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence            4555555  578999999999999999999999887764

>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1

Probab=85.46  E-value=2.6  Score=25.38  Aligned_cols=37  Identities=16%  Similarity=0.218  Sum_probs=31.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhc
Q psy8430          50 VKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKL   86 (361)
Q Consensus        50 ~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~   86 (361)
                      .+.+...+.++||..+..|..+|..|...+..|.+..
T Consensus        16 SR~RKk~~~~~LE~~v~~L~~eN~~L~~~~~~L~~~~   52 (55)
T 1dh3_A           16 SRRKKKEYVKSLENRVAVLENQNKTLIEELKALKDLY   52 (55)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4566778899999999999999999999999888664

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=85.29  E-value=15  Score=30.69  Aligned_cols=106  Identities=13%  Similarity=0.081  Sum_probs=53.5

Q ss_pred             CCCEEEEEeCC-----CcEEEEeCCCCeEEEE--EeCCCCCeEEEEEecCCCEEEEEECC-----CcEEEEecccccccc
Q psy8430         172 GQPVLGSASAD-----RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNKDLVLSASGD-----KSVHIWQAVINWECL  239 (361)
Q Consensus       172 ~~~~l~s~s~d-----~~i~~wd~~~~~~~~~--~~~h~~~v~~v~~~~~~~~l~s~~~d-----~~i~lwd~~~~~~~~  239 (361)
                      ++.+++.|+.+     ..+.+||..+.+-...  +......-..+.+  ++.+++.|+.+     ..+.+||+.+..   
T Consensus       121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~---  195 (308)
T 1zgk_A          121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNE---  195 (308)
T ss_dssp             TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTE---
T ss_pred             CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCe---
Confidence            45666666643     3578888877643221  1111111122222  56666666654     347778775441   


Q ss_pred             CCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEeeCCCCeE
Q psy8430         240 NNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-----RVANLFDVETGTI  305 (361)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~  305 (361)
                                        +..   +..+........++.+  ++..++.|+.+     ..+.+||+.+.+-
T Consensus       196 ------------------W~~---~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W  243 (308)
T 1zgk_A          196 ------------------WRM---ITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETW  243 (308)
T ss_dssp             ------------------EEE---CCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred             ------------------Eee---CCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence                              111   0011111111222333  66677777654     5589999987654

>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*

Probab=84.66  E-value=2.4  Score=22.17  Aligned_cols=29  Identities=21%  Similarity=0.363  Sum_probs=24.0

Q ss_pred             HHHHHHHHHHHHHHhhhhHHHHHHHHhhc
Q psy8430          58 FSQIEREFELLYLENLNLQDKIDMLMEKL   86 (361)
Q Consensus        58 ~~~~e~~~~~l~~e~~~l~~~~~~l~~~~   86 (361)
                      ..|+|..++.|..++.+|+..+..|++.+
T Consensus         3 MnQLE~kVEeLl~~n~~Le~eV~rLk~ll   31 (34)
T 2oxj_A            3 MXQLEXKVXELLXKNXHLEXEVXRLKXLV   31 (34)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            45788899999999999999888887654

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=84.39  E-value=13  Score=31.11  Aligned_cols=62  Identities=5%  Similarity=0.043  Sum_probs=34.5

Q ss_pred             CCCEEEEEeCC----CcEEEEeCCCCeEEEE--EeCCCCCeEEEEEecCCCEEEEEECC------CcEEEEecccc
Q psy8430         172 GQPVLGSASAD----RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNKDLVLSASGD------KSVHIWQAVIN  235 (361)
Q Consensus       172 ~~~~l~s~s~d----~~i~~wd~~~~~~~~~--~~~h~~~v~~v~~~~~~~~l~s~~~d------~~i~lwd~~~~  235 (361)
                      ++.+++.|+.+    ..+.+||..+.+-...  +......-..+.  -++.+++.|+.+      ..+.+||+.+.
T Consensus        55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~  128 (306)
T 3ii7_A           55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTE  128 (306)
T ss_dssp             TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTT
T ss_pred             CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCC
Confidence            45577777654    5688899887643222  211111112222  256677777655      35778887654

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=84.22  E-value=17  Score=30.30  Aligned_cols=88  Identities=14%  Similarity=0.113  Sum_probs=42.5

Q ss_pred             eecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCC------CcEEEEeCCCCeEEEE--EeCCCCCeEEEEEecCC
Q psy8430         144 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD------RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNK  215 (361)
Q Consensus       144 ~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d------~~i~~wd~~~~~~~~~--~~~h~~~v~~v~~~~~~  215 (361)
                      +.........+..+......-..+.+  ++.+++.|+.+      ..+.+||..+.+-...  +......-..+.  -++
T Consensus        75 ~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~  150 (306)
T 3ii7_A           75 YNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANG  150 (306)
T ss_dssp             EETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETT
T ss_pred             EeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECC
Confidence            44444444444443322222222333  46677777765      4688899887643222  111111111222  256


Q ss_pred             CEEEEEEC---------CCcEEEEecccc
Q psy8430         216 DLVLSASG---------DKSVHIWQAVIN  235 (361)
Q Consensus       216 ~~l~s~~~---------d~~i~lwd~~~~  235 (361)
                      .+++.|+.         -..+.+||+.+.
T Consensus       151 ~iyv~GG~~~~~~~~~~~~~~~~yd~~~~  179 (306)
T 3ii7_A          151 LIYVCGGSLGNNVSGRVLNSCEVYDPATE  179 (306)
T ss_dssp             EEEEECCEESCTTTCEECCCEEEEETTTT
T ss_pred             EEEEECCCCCCCCcccccceEEEeCCCCC
Confidence            66666553         234777887654

>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}

Probab=84.01  E-value=1.8  Score=44.25  Aligned_cols=38  Identities=18%  Similarity=0.302  Sum_probs=32.8

Q ss_pred             cEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430         273 VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       273 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~  310 (361)
                      .+.+++..++..++++-+.|++++||++.+++|+.+..
T Consensus       239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D  276 (1139)
T 4fhn_B          239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE  276 (1139)
T ss_dssp             CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred             eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence            45556677788999999999999999999999998864

>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D

Probab=83.48  E-value=3.4  Score=25.70  Aligned_cols=37  Identities=19%  Similarity=0.266  Sum_probs=31.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhc
Q psy8430          50 VKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKL   86 (361)
Q Consensus        50 ~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~   86 (361)
                      .+.|......+|+.+++.|..+|..|...+..|.+..
T Consensus        24 sR~RK~~~~~~Le~~v~~L~~eN~~L~~ev~~Lr~~l   60 (63)
T 2dgc_A           24 SRARKLQRMKQLEDKVEELLSKNYHLENEVARLKKLV   60 (63)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4667778888999999999999999999999888764

>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A

Probab=83.46  E-value=2.1  Score=22.34  Aligned_cols=28  Identities=29%  Similarity=0.423  Sum_probs=23.2

Q ss_pred             HHHHHHHHHHHHHhhhhHHHHHHHHhhc
Q psy8430          59 SQIEREFELLYLENLNLQDKIDMLMEKL   86 (361)
Q Consensus        59 ~~~e~~~~~l~~e~~~l~~~~~~l~~~~   86 (361)
                      .|+|..++.|..++.+|+..+..|.+-+
T Consensus         3 ~QLE~kVEeLl~~n~~Le~EV~RLk~Ll   30 (33)
T 3m48_A            3 AQLEAKVEELLSKNWNLENEVARLKKLV   30 (33)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence            4688899999999999998888877653

>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A

Probab=83.32  E-value=3.2  Score=25.72  Aligned_cols=41  Identities=17%  Similarity=0.233  Sum_probs=35.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhccccc
Q psy8430          50 VKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRES   90 (361)
Q Consensus        50 ~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~~~~~   90 (361)
                      .+.+......+++.+++.|..+|..|..++..|+.+.....
T Consensus        16 ~R~rKk~~~~~Le~~v~~L~~~n~~L~~~v~~L~~e~~~Lk   56 (62)
T 1jnm_A           16 SRKRKLERIARLEEKVKTLKAQNSELASTANMLREQVAQLK   56 (62)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46677788899999999999999999999999988865554

>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1

Probab=82.69  E-value=2.3  Score=26.23  Aligned_cols=40  Identities=20%  Similarity=0.198  Sum_probs=33.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhcccc
Q psy8430          50 VKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRE   89 (361)
Q Consensus        50 ~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~~~~   89 (361)
                      .+.+......+++.+++.+..+|..|..++..|+.+....
T Consensus        16 ~R~rKk~~~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~L   55 (61)
T 1t2k_D           16 SRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQL   55 (61)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4566777888999999999999999999999998876554

>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1

Probab=82.69  E-value=2.2  Score=26.58  Aligned_cols=41  Identities=17%  Similarity=0.152  Sum_probs=34.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhccccc
Q psy8430          50 VKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRES   90 (361)
Q Consensus        50 ~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~~~~~   90 (361)
                      .+.+.......++.+.+.|..+|.+|..++..|+.+.....
T Consensus        17 ~R~KKk~~~~~le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk   57 (63)
T 1ci6_A           17 YRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLK   57 (63)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56677778888999999999999999999999988766554

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=82.38  E-value=15  Score=38.37  Aligned_cols=130  Identities=15%  Similarity=0.128  Sum_probs=75.5

Q ss_pred             CCeEEEEEcCCCCEEEEEe-------CCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEe--cC-CCEEEEEEC---CCcEE
Q psy8430         162 DGVWDVAVRPGQPVLGSAS-------ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL--PN-KDLVLSASG---DKSVH  228 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s-------~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~--~~-~~~l~s~~~---d~~i~  228 (361)
                      ..|..-..++++.+++..|       ..|.+.+|..+.+. .+.+.||.+.-..+...  +. ..+|+-+..   .+.++
T Consensus       151 ~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLh  229 (1630)
T 1xi4_A          151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH  229 (1630)
T ss_pred             CeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEE
Confidence            4466666788888766443       35788888886443 34456665544443332  11 223332222   36888


Q ss_pred             EEecccc-ccccCCCCCCCCCCCCCCCCCceecccccEEE---eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCe
Q psy8430         229 IWQAVIN-WECLNNDNDSDLDESKEPDESSITLRTPVKEL---LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT  304 (361)
Q Consensus       229 lwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~  304 (361)
                      |-++... .....                 .. ...+..+   ..-.....++..++....++..+.-|.++++|+.||.
T Consensus       230 i~Ei~~~~~~~~~-----------------f~-kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~  291 (1630)
T 1xi4_A          230 IIEVGTPPTGNQP-----------------FP-KKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT  291 (1630)
T ss_pred             EEecCCCccCCCC-----------------Cc-cccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccch
Confidence            8887543 10000                 00 0000001   1123455678888888899999999999999999999


Q ss_pred             EEEEee
Q psy8430         305 ILQSLT  310 (361)
Q Consensus       305 ~~~~~~  310 (361)
                      ++..-.
T Consensus       292 ~i~~~r  297 (1630)
T 1xi4_A          292 CIYMNR  297 (1630)
T ss_pred             hhhhcc
Confidence            876444

>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D

Probab=81.83  E-value=2.6  Score=26.22  Aligned_cols=40  Identities=20%  Similarity=0.233  Sum_probs=33.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhcccc
Q psy8430          50 VKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRE   89 (361)
Q Consensus        50 ~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~~~~   89 (361)
                      .+.+.......++.+++.|..+|..|+..+..|+++....
T Consensus        17 cR~rKk~~~~~Le~~v~~L~~~n~~L~~ei~~L~~e~~~L   56 (63)
T 2wt7_A           17 CRNRRRELTDTLQAETDQLEDEKSALQTEIANLLKEKEKL   56 (63)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4567778888999999999999999999999888775544

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=81.65  E-value=36  Score=32.11  Aligned_cols=115  Identities=4%  Similarity=-0.138  Sum_probs=71.9

Q ss_pred             CCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCE-EEEEEC-CCcEEEEecccccc
Q psy8430         161 RDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL-VLSASG-DKSVHIWQAVINWE  237 (361)
Q Consensus       161 ~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~~~-d~~i~lwd~~~~~~  237 (361)
                      ......+++++.+. ++++-...+.|.+.++........+...-.....|++.|.+.. +++-.. .+.|...++...  
T Consensus        83 ~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~--  160 (619)
T 3s94_A           83 LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS--  160 (619)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSC--
T ss_pred             CCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCC--
Confidence            35688999999555 5555566789999998754333333344566789999996554 444322 345555554321  


Q ss_pred             ccCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEeeCCC
Q psy8430         238 CLNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVET  302 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~  302 (361)
                                               ....+ ...-.....+++++++..|+.+. ..+.|..+|+..
T Consensus       161 -------------------------~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG  202 (619)
T 3s94_A          161 -------------------------SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG  202 (619)
T ss_dssp             -------------------------SCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSC
T ss_pred             -------------------------ceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCC
Confidence                                     11122 12345678999999777766664 456788888864

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=81.54  E-value=17  Score=30.49  Aligned_cols=62  Identities=6%  Similarity=0.034  Sum_probs=33.6

Q ss_pred             CCCEEEEEeC-C-----CcEEEEeCCCCeEEEE--EeCCCCCeEEEEEecCCCEEEEEECCC-----cEEEEecccc
Q psy8430         172 GQPVLGSASA-D-----RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNKDLVLSASGDK-----SVHIWQAVIN  235 (361)
Q Consensus       172 ~~~~l~s~s~-d-----~~i~~wd~~~~~~~~~--~~~h~~~v~~v~~~~~~~~l~s~~~d~-----~i~lwd~~~~  235 (361)
                      ++.+++.|+. +     ..+.+||..+.+-...  +......-.++.+  ++.+++.|+.++     .+.+||+.+.
T Consensus       148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~  222 (315)
T 4asc_A          148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDN  222 (315)
T ss_dssp             TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred             CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCC
Confidence            4556677765 2     4688899877642221  1111111122222  667777777654     4777887654

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=81.45  E-value=17  Score=30.50  Aligned_cols=62  Identities=6%  Similarity=0.087  Sum_probs=33.9

Q ss_pred             CCCEEEEEeCC-----CcEEEEeCCCCeEEEE--EeCCCCCeEEEEEecCCCEEEEEECC-----CcEEEEecccc
Q psy8430         172 GQPVLGSASAD-----RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNKDLVLSASGD-----KSVHIWQAVIN  235 (361)
Q Consensus       172 ~~~~l~s~s~d-----~~i~~wd~~~~~~~~~--~~~h~~~v~~v~~~~~~~~l~s~~~d-----~~i~lwd~~~~  235 (361)
                      ++.+++.|+.+     ..+.+||+.+.+-...  +......-..+.+  ++.+++.|+.+     ..+.+||+.+.
T Consensus       168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~  241 (308)
T 1zgk_A          168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETE  241 (308)
T ss_dssp             TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred             CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCC
Confidence            46677777654     4588899876643211  1111111122222  56677777654     45788887654

>2xz2_A CSTF-50, isoform B; RNA-binding protein, 3' END mRNA maturation, transcription; 1.40A {Drosophila melanogaster}

Probab=80.42  E-value=0.05  Score=33.73  Aligned_cols=35  Identities=11%  Similarity=-0.064  Sum_probs=31.0

Q ss_pred             ccccccccccceeecccchhhhHHHhhcCCcCCcc
Q psy8430          10 KSTKHKRTASGKLSNLGDQDLSMLRTHLNSEYDDV   44 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~~~~~L~~e~~~~   44 (361)
                      .+.+|+.+.|+||++|-.+|++..+..|.......
T Consensus        12 ~iK~Re~LYrLIISQL~YDG~~~iA~~L~~~v~~~   46 (66)
T 2xz2_A           12 LVKNREILYRLMISQLMYDGLEKFAMELSMLVKAD   46 (66)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhHHHHHHHHHhhcCCC
Confidence            47788999999999999999999999999888833

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=80.07  E-value=34  Score=30.90  Aligned_cols=55  Identities=15%  Similarity=0.091  Sum_probs=36.2

Q ss_pred             cCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCC---eEEEEEe-----C----CCCCeEEEEEecC
Q psy8430         160 HRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTG---KCVLQYS-----G----HSGSVNSVRFLPN  214 (361)
Q Consensus       160 h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~---~~~~~~~-----~----h~~~v~~v~~~~~  214 (361)
                      .-..-+.|+|.|+|. .|+.+...|.|++++....   ..+..+.     +    .......|+|+|+
T Consensus        12 gL~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~   79 (463)
T 2wg3_C           12 GLRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN   79 (463)
T ss_dssp             EESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred             CCCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence            345678999999996 4555677899999975422   1222221     1    1356789999995

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	361
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-18
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	5e-18
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	4e-17
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	3e-11
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-07
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	6e-05
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	5e-17
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-15
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	6e-15
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	3e-10
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-05
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-04
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	0.002
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	2e-14
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	4e-08
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	2e-07
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	0.003
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	0.003
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	4e-14
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	1e-13
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	8e-13
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	2e-06
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	1e-05
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	1e-12
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	2e-09
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	8e-08
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	5e-07
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	7e-06
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	2e-12
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	3e-06
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	7e-06
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	2e-04
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	8e-12
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	3e-10
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	8e-07
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	8e-04
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	8e-04
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	2e-11
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	1e-09
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	8e-07
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	5e-11
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	9e-09
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	4e-04
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	0.003
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-10
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	1e-08
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	8e-05
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	2e-10
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	0.001
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	3e-10
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	5e-08
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	1e-06
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	3e-06
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	3e-10
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	1e-09
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	0.002
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	2e-09
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	7e-08
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	4e-07
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	2e-05
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	7e-09
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	7e-09
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	3e-05
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	8e-04
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	0.002
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	3e-07
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	2e-04
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	2e-06
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	5e-04
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	2e-06
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	1e-05
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	5e-04
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	2e-05
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	9e-05
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	0.001
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	6e-04
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	9e-04
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	0.001
d2p4oa1	302	b.68.6.3 (A:4-305) Hypothetical protein All0351 ho	8e-04

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 82.5 bits (202), Expect = 2e-18
 Identities = 44/213 (20%), Positives = 69/213 (32%), Gaps = 16/213 (7%)

Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
             + SGHR  V  V   P   V+ SAS D T+++W  +TG       GH+ SV  + F  
Sbjct: 10  KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 69

Query: 214 NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRT----------- 262
           +  L+ S S D ++ +W                   S     +   + +           
Sbjct: 70  SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWE 129

Query: 263 -----PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPH 317
                 VK   GH   V       DG  + + S D+   ++ V T      L  H     
Sbjct: 130 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVE 189

Query: 318 ILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHS 350
            +  +   S  S       +    G     + S
Sbjct: 190 CISWAPESSYSSISEATGSETKKSGKPGPFLLS 222

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 81.3 bits (199), Expect = 5e-18
 Identities = 32/149 (21%), Positives = 53/149 (35%), Gaps = 26/149 (17%)

Query: 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 210
                S      G          P L S S D+T+++W   TG C++   GH   V  V 
Sbjct: 195 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL 254

Query: 211 FLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGH 270
           F      +LS + DK++ +W               D    +            +K L  H
Sbjct: 255 FHSGGKFILSCADDKTLRVW---------------DYKNKR-----------CMKTLNAH 288

Query: 271 SNVVIAADWLSDGEQVITASWDRVANLFD 299
            + V + D+      V+T S D+   +++
Sbjct: 289 EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 79.0 bits (193), Expect = 4e-17
 Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 6/173 (3%)

Query: 150 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 209
           + Y +++F+GHR+ V  V       ++ S S D+TVR+W   T +C  +   H   V  +
Sbjct: 132 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECI 191

Query: 210 RFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG 269
            + P       +    S            L+   D  +   K  D S+      +  L+G
Sbjct: 192 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI---KMWDVST---GMCLMTLVG 245

Query: 270 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
           H N V    + S G+ +++ + D+   ++D +    +++L  H+     L   
Sbjct: 246 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH 298

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 61.3 bits (147), Expect = 3e-11
 Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 6/173 (3%)

Query: 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 210
              IR+  GH   V  V++ P    + SAS D+T+++W  QTG CV  ++GH   V  VR
Sbjct: 91  FECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 150

Query: 211 FLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGH 270
              +  L+ S S D++V +W  V   EC      ++L E +   E            +  
Sbjct: 151 PNQDGTLIASCSNDQTVRVWV-VATKECK-----AELREHRHVVECISWAPESSYSSISE 204

Query: 271 SNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSS 323
           +           G  +++ S D+   ++DV TG  L +L GHD     +   S
Sbjct: 205 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS 257

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.7 bits (117), Expect = 2e-07
 Identities = 16/90 (17%), Positives = 31/90 (34%)

Query: 263 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
               L GH + V    +      +++AS D    ++D ETG   ++L GH +    +   
Sbjct: 9   EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 68

Query: 323 SYYSKVSCDLFQRIQHLDCGTSENPIHSVC 352
                ++         L        I ++ 
Sbjct: 69  HSGKLLASCSADMTIKLWDFQGFECIRTMH 98

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.0 bits (97), Expect = 6e-05
 Identities = 8/42 (19%), Positives = 19/42 (45%)

Query: 147 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLW 188
              +   +++ + H   V  +      P + + S D+TV++W
Sbjct: 275 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 79.0 bits (193), Expect = 5e-17
 Identities = 31/172 (18%), Positives = 64/172 (37%), Gaps = 24/172 (13%)

Query: 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 210
             +  +F+GH   V  +++ P   +  S + D + +LW  + G C   ++GH   +N++ 
Sbjct: 174 GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC 233

Query: 211 FLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGH 270
           F PN +   + S D +  ++    + E +   +D+                         
Sbjct: 234 FFPNGNAFATGSDDATCRLFDLRADQELMTYSHDN------------------------I 269

Query: 271 SNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
              + +  +   G  ++    D   N++D         L GHD     L V+
Sbjct: 270 ICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVT 321

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 74.0 bits (180), Expect = 2e-15
 Identities = 14/80 (17%), Positives = 25/80 (31%)

Query: 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 210
                S      G+  V+      +L +   D    +W           +GH   V+ + 
Sbjct: 260 ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLG 319

Query: 211 FLPNKDLVLSASGDKSVHIW 230
              +   V + S D  + IW
Sbjct: 320 VTDDGMAVATGSWDSFLKIW 339

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 72.5 bits (176), Expect = 6e-15
 Identities = 29/148 (19%), Positives = 48/148 (32%), Gaps = 28/148 (18%)

Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRL--WSTQTGKCVLQYSGHSGSVNSVRF 211
            ++F+GH   +  +   P      + S D T RL             +      + SV F
Sbjct: 219 RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSF 278

Query: 212 LPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHS 271
             +  L+L+   D + ++W               D  ++                L GH 
Sbjct: 279 SKSGRLLLAGYDDFNCNVW---------------DALKAD-----------RAGVLAGHD 312

Query: 272 NVVIAADWLSDGEQVITASWDRVANLFD 299
           N V       DG  V T SWD    +++
Sbjct: 313 NRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 58.6 bits (140), Expect = 3e-10
 Identities = 40/227 (17%), Positives = 73/227 (32%), Gaps = 22/227 (9%)

Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
           R+  GH   ++ +       +L SAS D  + +W + T   V      S  V +  + P+
Sbjct: 49  RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108

Query: 215 KDLVLSASGDKSVHIWQAV-------------------INWECLNNDNDSDLDESKEPDE 255
            + V     D    I+                           L+++             
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCAL 168

Query: 256 SSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
             I          GH+  V++     D    ++ + D  A L+DV  G   Q+ TGH+ +
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD 228

Query: 316 PHILCVS---SYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQS 359
            + +C     + ++  S D   R+  L             +   I S
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITS 275

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 44.0 bits (102), Expect = 2e-05
 Identities = 8/43 (18%), Positives = 18/43 (41%)

Query: 147 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWS 189
             L   +    +GH + V  + V      + + S D  +++W+
Sbjct: 298 DALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 40.9 bits (94), Expect = 1e-04
 Identities = 15/96 (15%), Positives = 32/96 (33%)

Query: 243 NDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET 302
           + +    +   D          + L GH   + A  W +D   +++AS D    ++D  T
Sbjct: 27  DATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYT 86

Query: 303 GTILQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQH 338
              + ++            +   + V+C     I  
Sbjct: 87  TNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICS 122

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 37.0 bits (84), Expect = 0.002
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 194 KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA 232
           +      GH   + ++ +  +  L++SAS D  + IW +
Sbjct: 46  RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDS 84

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.0 bits (172), Expect = 2e-14
 Identities = 16/81 (19%), Positives = 26/81 (32%), Gaps = 1/81 (1%)

Query: 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 210
                    H   V  +          S   D  +  W T  G  + Q    S SV S  
Sbjct: 255 KPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCD 313

Query: 211 FLPNKDLVLSASGDKSVHIWQ 231
              +   +++ SGDK   +++
Sbjct: 314 ISVDDKYIVTGSGDKKATVYE 334

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (123), Expect = 4e-08
 Identities = 11/85 (12%), Positives = 24/85 (28%), Gaps = 6/85 (7%)

Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC-----VLQYSGHSGSVNSVRFLP 213
            H + V  V +      + +      V++W             L        + S + LP
Sbjct: 49  NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP 107

Query: 214 NKDLVLSASGDKSVHIWQAVINWEC 238
           +   ++      ++ IW        
Sbjct: 108 DGCTLIVGGEASTLSIWDLAAPTPR 132

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (117), Expect = 2e-07
 Identities = 20/150 (13%), Positives = 42/150 (28%), Gaps = 28/150 (18%)

Query: 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 210
             +          ++ +   P    L        V +          Q   H   V S++
Sbjct: 214 EGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLK 272

Query: 211 FLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGH 270
           F       +S   D  ++ W+       +                               
Sbjct: 273 FAYCGKWFVSTGKDNLLNAWR-TPYGASI--------------------------FQSKE 305

Query: 271 SNVVIAADWLSDGEQVITASWDRVANLFDV 300
           S+ V++ D   D + ++T S D+ A +++V
Sbjct: 306 SSSVLSCDISVDDKYIVTGSGDKKATVYEV 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (84), Expect = 0.003
 Identities = 10/56 (17%), Positives = 17/56 (30%), Gaps = 1/56 (1%)

Query: 268 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSS 323
           L H  VV A    +    V T        ++D+        ++  D       + S
Sbjct: 48  LNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRS 102

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (83), Expect = 0.003
 Identities = 7/53 (13%), Positives = 18/53 (33%), Gaps = 3/53 (5%)

Query: 270 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
           H + V++  +   G+  ++   D + N +    G  +           +L   
Sbjct: 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSS---VLSCD 313

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 70.6 bits (171), Expect = 4e-14
 Identities = 40/174 (22%), Positives = 69/174 (39%), Gaps = 21/174 (12%)

Query: 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-------SGHSGSVNSVRFL 212
                           + + S DR VR+W ++TG  V +        +GH  SV SV F 
Sbjct: 204 EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFT 263

Query: 213 PNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSN 272
            +   V+S S D+SV +W                 + + + D  +    T     +GH +
Sbjct: 264 RDGQSVVSGSLDRSVKLWNLQ--------------NANNKSDSKTPNSGTCEVTYIGHKD 309

Query: 273 VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
            V++     + E +++ S DR    +D ++G  L  L GH      + V++  S
Sbjct: 310 FVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSS 363

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 69.4 bits (168), Expect = 1e-13
 Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 6/88 (6%)

Query: 150 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 209
           S     ++ GH+D V  VA       + S S DR V  W  ++G  +L   GH  SV SV
Sbjct: 297 SGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISV 356

Query: 210 ------RFLPNKDLVLSASGDKSVHIWQ 231
                    P  ++  + SGD    IW+
Sbjct: 357 AVANGSSLGPEYNVFATGSGDCKARIWK 384

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 66.7 bits (161), Expect = 8e-13
 Identities = 40/167 (23%), Positives = 59/167 (35%), Gaps = 44/167 (26%)

Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK------------CVLQYS 200
           +  S +GH+D V+ V        + S S DR+V+LW+ Q               C + Y 
Sbjct: 246 ENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI 305

Query: 201 GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITL 260
           GH   V SV    N + +LS S D+ V  W               D              
Sbjct: 306 GHKDFVLSVATTQNDEYILSGSKDRGVLFW---------------DKKSGN--------- 341

Query: 261 RTPVKELLGHSNVVIAADWLS------DGEQVITASWDRVANLFDVE 301
             P+  L GH N VI+    +      +     T S D  A ++  +
Sbjct: 342 --PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.1 bits (110), Expect = 2e-06
 Identities = 12/124 (9%), Positives = 42/124 (33%), Gaps = 13/124 (10%)

Query: 172 GQPVLGSASADRTVRLWSTQTGKC----VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSV 227
             P       +    L++    +     + +   H+  V  V+F  + + + +   +K+ 
Sbjct: 27  SVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTT 85

Query: 228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI 287
            +++ V +   +   +D         + ++ +              + +  +  DG+ + 
Sbjct: 86  QVYR-VSDGSLVARLSDDSAANKDPENLNTSSSP-------SSDLYIRSVCFSPDGKFLA 137

Query: 288 TASW 291
           T + 
Sbjct: 138 TGAE 141

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.4 bits (103), Expect = 1e-05
 Identities = 38/221 (17%), Positives = 78/221 (35%), Gaps = 20/221 (9%)

Query: 130 TNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWS 189
             K     ++        + +   +    GH   ++ +   P    L S S DRTVR+W 
Sbjct: 132 DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWD 191

Query: 190 TQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDE 249
            +TG+C L  S   G         +   + + S D++V +W +   +             
Sbjct: 192 LRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV----------- 240

Query: 250 SKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 309
                     L +  +   GH + V +  +  DG+ V++ S DR   L++++        
Sbjct: 241 --------ERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDS 292

Query: 310 TGHDEEPHILCVSSYYSKV-SCDLFQRIQHLDCGTSENPIH 349
              +     +    +   V S    Q  +++  G+ +  + 
Sbjct: 293 KTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVL 333

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (159), Expect = 1e-12
 Identities = 39/182 (21%), Positives = 62/182 (34%), Gaps = 11/182 (6%)

Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
            +   GH D V       G   + S S D T+++WS  TGKC+    GH+G V S +   
Sbjct: 9   PKVLKGHDDHVITCLQFCGN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD 67

Query: 214 NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSN- 272
           N  +  S      V   +       L     +               R     +      
Sbjct: 68  NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETG 127

Query: 273 ---------VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSS 323
                    V        DG +V++ ++D +  ++D ET T L +L GH    + L    
Sbjct: 128 QCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG 187

Query: 324 YY 325
            +
Sbjct: 188 IH 189

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (134), Expect = 2e-09
 Identities = 30/173 (17%), Positives = 60/173 (34%), Gaps = 29/173 (16%)

Query: 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 210
              + +  GH + V+ +       V  S S D ++R+W  +TG C+   +GH    + + 
Sbjct: 167 ETCLHTLQGHTNRVYSLQFDGIHVV--SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 224

Query: 211 FLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGH 270
                ++++S + D +V IW                                       +
Sbjct: 225 L--KDNILVSGNADSTVKIWDIKTGQCLQTLQGP-------------------------N 257

Query: 271 SNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSS 323
            +         +   VIT+S D    L+D++TG  +++L   +       V  
Sbjct: 258 KHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWR 310

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (120), Expect = 8e-08
 Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 11/89 (12%)

Query: 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV-----LQYSGHSGS 205
              ++  + H+  V  +       +  ++S D TV+LW  +TG+ +     L+  G  G 
Sbjct: 250 LQTLQGPNKHQSAVTCLQFNKNFVI--TSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGV 307

Query: 206 VNSVRFLPNKDLVLSASGDKS----VHIW 230
           V  +R    K +    S + +    + + 
Sbjct: 308 VWRIRASNTKLVCAVGSRNGTEETKLLVL 336

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (114), Expect = 5e-07
 Identities = 15/91 (16%), Positives = 25/91 (27%), Gaps = 1/91 (1%)

Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCV 321
              K L GH + VI       G ++++ S D    ++   TG  L++L GH        +
Sbjct: 7   KSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM 65

Query: 322 SSYYSKVSCDLFQRIQHLDCGTSENPIHSVC 352
                                          
Sbjct: 66  RDNIIISGSTDRTLKVWNAETGECIHTLYGH 96

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (105), Expect = 7e-06
 Identities = 11/52 (21%), Positives = 20/52 (38%), Gaps = 2/52 (3%)

Query: 188 WSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECL 239
           W     K      GH   V +       + ++S S D ++ +W   +  +CL
Sbjct: 1   WRRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWS-AVTGKCL 50

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 65.6 bits (158), Expect = 2e-12
 Identities = 12/83 (14%), Positives = 31/83 (37%), Gaps = 2/83 (2%)

Query: 158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL--QYSGHSGSVNSVRFLPNK 215
           S   + +   A    +  +     +  V ++     K V   +   H+G V  V + P+ 
Sbjct: 4   SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS 63

Query: 216 DLVLSASGDKSVHIWQAVINWEC 238
           + +++   D++ ++W        
Sbjct: 64  NRIVTCGTDRNAYVWTLKGRTWK 86

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 46.4 bits (108), Expect = 3e-06
 Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 24/101 (23%)

Query: 199 YSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSI 258
           +S     ++   +  ++  +     +  VHI+               +   +K       
Sbjct: 3   HSFLVEPISCHAWNKDRTQIAICPNNHEVHIY---------------EKSGNK------- 40

Query: 259 TLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
                V EL  H+  V   DW  D  +++T   DR A ++ 
Sbjct: 41  --WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWT 79

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 45.2 bits (105), Expect = 7e-06
 Identities = 29/234 (12%), Positives = 64/234 (27%), Gaps = 18/234 (7%)

Query: 88  RESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTS 147
            +  + +   +      ++      +      S     ++ +    +V+     + + + 
Sbjct: 128 NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSK 187

Query: 148 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 207
           +     +   S     V  V        +   S D TV L        V   +  +  + 
Sbjct: 188 MPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLL 247

Query: 208 SVRFLPNKDLVLSASGDKSVHIWQAVINWECL-----------NNDNDSDLDESKEPD-- 254
           +V F+    LV +      V         +             +    +  +  +  D  
Sbjct: 248 AVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKK 307

Query: 255 -ESSITLRTPVKELLGHSNVVIAADWLSDGE----QVITASWDRVANLFDVETG 303
             S  +          H N V     LS G+    Q  T   D   +++DV + 
Sbjct: 308 ASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL 361

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 40.6 bits (93), Expect = 2e-04
 Identities = 9/65 (13%), Positives = 19/65 (29%)

Query: 138 SKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL 197
           +  V  ++ S     ++     H   V  V   P    + +   DR   +W+ +      
Sbjct: 28  NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP 87

Query: 198 QYSGH 202
                
Sbjct: 88  TLVIL 92

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 63.3 bits (152), Expect = 8e-12
 Identities = 13/88 (14%), Positives = 33/88 (37%), Gaps = 3/88 (3%)

Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC---VLQYSGHSGSVNSVR 210
           ++     +D + D+ + P + +L   S D ++ ++          +LQ   +   +    
Sbjct: 4   VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCN 63

Query: 211 FLPNKDLVLSASGDKSVHIWQAVINWEC 238
           F+ N DL +     +   +   +I    
Sbjct: 64  FIDNTDLQIYVGTVQGEILKVDLIGSPS 91

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.3 bits (139), Expect = 3e-10
 Identities = 22/159 (13%), Positives = 52/159 (32%), Gaps = 1/159 (0%)

Query: 95  KYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKI 154
              E + ++          K++   +  S            Q     SS + +       
Sbjct: 185 GTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLN 244

Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
              +     V  +   P    L +A +D  +  W+ QT K +  ++      + V+   +
Sbjct: 245 LKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDSVVKIACS 303

Query: 215 KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEP 253
            +++  A+ D +     A+     LN  +   + + + P
Sbjct: 304 DNILCLATSDDTFKTNAAIDQTIELNASSIYIIFDYENP 342

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.9 bits (112), Expect = 8e-07
 Identities = 9/93 (9%), Positives = 30/93 (32%), Gaps = 23/93 (24%)

Query: 200 SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSIT 259
                 ++ ++ +P+K L+L  S D S+ ++                             
Sbjct: 8   QAPKDYISDIKIIPSKSLLLITSWDGSLTVY-----------------------KFDIQA 44

Query: 260 LRTPVKELLGHSNVVIAADWLSDGEQVITASWD 292
               + + L + + ++  +++ + +  I     
Sbjct: 45  KNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV 77

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.7 bits (88), Expect = 8e-04
 Identities = 7/55 (12%), Positives = 17/55 (30%), Gaps = 1/55 (1%)

Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPH-ILCVS 322
              + +     +     ++  SWD    ++  +       L       H +LC +
Sbjct: 9   APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCN 63

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.7 bits (88), Expect = 8e-04
 Identities = 13/146 (8%), Positives = 48/146 (32%), Gaps = 16/146 (10%)

Query: 181 ADRTVRLWSTQTGKCVLQYSGHSGS----VNSVRFLPNKDLVLSASGDKSVHIWQAVINW 236
            +  V+ +     +        SG      +       ++    +S D  V +       
Sbjct: 168 NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQG 227

Query: 237 ECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVAN 296
           +  N+         +   + +             +  V + ++    + + TA  D + +
Sbjct: 228 DDYNSSKRFAFRCHRLNLKDT-----------NLAYPVNSIEFSPRHKFLYTAGSDGIIS 276

Query: 297 LFDVETGTILQSLTGHDEEPHILCVS 322
            ++++T   +++    +E+  ++ ++
Sbjct: 277 CWNLQTRKKIKNFAKFNEDS-VVKIA 301

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.6 bits (150), Expect = 2e-11
 Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 1/86 (1%)

Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
           +  +  GH   V           + + + D+ +R++ +   K +LQ SGH G V ++++ 
Sbjct: 4   QRTTLRGHMTSVITCLQFEDN-YVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYA 62

Query: 213 PNKDLVLSASGDKSVHIWQAVINWEC 238
               LV  ++                
Sbjct: 63  HGGILVSGSTDRTVRVWDIKKGCCTH 88

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.8 bits (135), Expect = 1e-09
 Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 2/81 (2%)

Query: 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ-YSGHSGSVNSV 209
               R FS H   +  +        +  + ++    +++ ++GK V       +  + SV
Sbjct: 271 NDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSV 330

Query: 210 RFLPNKDLVLSASGDKSVHIW 230
            F     LV +   D    + 
Sbjct: 331 NFKGKT-LVAAVEKDGQSFLE 350

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.0 bits (112), Expect = 8e-07
 Identities = 19/89 (21%), Positives = 30/89 (33%), Gaps = 1/89 (1%)

Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
           L GH   VI      +   VIT + D++  ++D      L  L+GHD     L  +    
Sbjct: 8   LRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGI 66

Query: 327 KVSCDLFQRIQHLDCGTSENPIHSVCVFQ 355
            VS    + ++  D               
Sbjct: 67  LVSGSTDRTVRVWDIKKGCCTHVFEGHNS 95

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 60.7 bits (145), Expect = 5e-11
 Identities = 15/81 (18%), Positives = 31/81 (38%), Gaps = 1/81 (1%)

Query: 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG-SVNSV 209
                    H   V+ +   P    + SASAD+T+++W+  T K        +      +
Sbjct: 228 EDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQL 287

Query: 210 RFLPNKDLVLSASGDKSVHIW 230
             +  K  ++S S +  ++  
Sbjct: 288 GIIWTKQALVSISANGFINFV 308

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 53.8 bits (127), Expect = 9e-09
 Identities = 11/78 (14%), Positives = 20/78 (25%), Gaps = 1/78 (1%)

Query: 161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLS 220
           R     +   P    +   +   +V      +      Y+ HS      +  P+     S
Sbjct: 17  RGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCAS 75

Query: 221 ASGDKSVHIWQAVINWEC 238
                +V IW        
Sbjct: 76  GDVHGNVRIWDTTQTTHI 93

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 39.5 bits (90), Expect = 4e-04
 Identities = 10/87 (11%), Positives = 20/87 (22%), Gaps = 2/87 (2%)

Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVNSVRF 211
              ++ H          P      S      VR+W T              SG V  + +
Sbjct: 51  TEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISW 110

Query: 212 LPNKDLVLSASGDKSVHIWQAVINWEC 238
                 + +    +       + +   
Sbjct: 111 DSESKRIAAVGEGRERFGHVFLFDTGT 137

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 36.8 bits (83), Expect = 0.003
 Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 278 DWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE-EPHILCVS 322
            W  DG ++ +AS D+   +++V T  + +++      E   L + 
Sbjct: 245 TWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGII 290

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.7 bits (140), Expect = 2e-10
 Identities = 36/188 (19%), Positives = 68/188 (36%), Gaps = 19/188 (10%)

Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
           +I   S    GV+   ++     + S   D T+++W   T +C    +GH+GSV  +++ 
Sbjct: 7   RIHCRSETSKGVY--CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD 64

Query: 213 PNKDLVLSASGD---------------KSVHIWQAVINWECLNNDNDSDLDESKEPDESS 257
               +  S+                           + +        S        D +S
Sbjct: 65  ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMAS 124

Query: 258 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPH 317
            T  T  + L+GH   V   D+  D + +++AS DR   +++  T   +++L GH     
Sbjct: 125 PTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA 182

Query: 318 ILCVSSYY 325
            L      
Sbjct: 183 CLQYRDRL 190

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (127), Expect = 1e-08
 Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 23/150 (15%)

Query: 150 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 209
           +C  +R+ +GH+ G+  +  R     + S S+D T+RLW  + G C+    GH   V  +
Sbjct: 167 TCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 224

Query: 210 RFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG 269
           RF   +  ++S + D  + +W                 D     D  +      ++ L+ 
Sbjct: 225 RFDNKR--IVSGAYDGKIKVW-----------------DLVAALDPRAPAGTLCLRTLVE 265

Query: 270 HSNVVIAADWLSDGEQVITASWDRVANLFD 299
           HS  V    +  D  Q++++S D    ++D
Sbjct: 266 HSGRVFRLQF--DEFQIVSSSHDDTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (95), Expect = 8e-05
 Identities = 12/79 (15%), Positives = 23/79 (29%), Gaps = 1/79 (1%)

Query: 261 RTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHIL 319
           R  ++ +   S        L  D +++++   D    ++D  T    + LTGH      L
Sbjct: 2   RHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCL 61

Query: 320 CVSSYYSKVSCDLFQRIQH 338
                              
Sbjct: 62  QYDERVIITGSSDSTVRVW 80

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 59.0 bits (141), Expect = 2e-10
 Identities = 15/171 (8%), Positives = 42/171 (24%), Gaps = 11/171 (6%)

Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL--QYSGHSGSVNSVRFLPN 214
                  +   A       L   +    +      +G           + +  +  + P 
Sbjct: 190 HPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPG 249

Query: 215 KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVV 274
               ++             I       D       S+            + +      + 
Sbjct: 250 GWQQVAYHRALDR------IYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEID 303

Query: 275 IAADWLSDGEQ--VITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSS 323
            + +   D +      ++ D+   + D E+G  L+S+      P ++  + 
Sbjct: 304 -SINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD 353

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 38.2 bits (87), Expect = 0.001
 Identities = 6/57 (10%), Positives = 21/57 (36%), Gaps = 2/57 (3%)

Query: 160 HRDGVWDVAVRP-GQPVL-GSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
               +  + V    +P+L   ++ D+T+ +   ++G+ +   +        +     
Sbjct: 298 MGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADM 354

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 58.5 bits (139), Expect = 3e-10
 Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 1/78 (1%)

Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFL 212
            +   GH   +  ++       L SA A+  +  W   TG     +   H+  +  ++  
Sbjct: 5   DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 64

Query: 213 PNKDLVLSASGDKSVHIW 230
              DL   +  D    + 
Sbjct: 65  SKGDLFTVSWDDHLKVVP 82

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 51.5 bits (121), Expect = 5e-08
 Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 2/82 (2%)

Query: 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYSGHSGSVNS 208
                S++ H   V  V+  P    L + S D +V +W+        ++    H+ S  +
Sbjct: 214 LAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVN 273

Query: 209 VRFLPNKDLVLSASGDKSVHIW 230
                N+  ++SA  D ++  W
Sbjct: 274 SVIWLNETTIVSAGQDSNIKFW 295

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 47.3 bits (110), Expect = 1e-06
 Identities = 14/93 (15%), Positives = 32/93 (34%), Gaps = 1/93 (1%)

Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT-GHDEEPHILCVS 322
            +   GH+  + A    +DG+ + +A  +   N +D+ TG   +     H      +  +
Sbjct: 5   DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 64

Query: 323 SYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQ 355
           S     +      ++ +  G S          +
Sbjct: 65  SKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANK 97

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 46.1 bits (107), Expect = 3e-06
 Identities = 6/40 (15%), Positives = 16/40 (40%)

Query: 193 GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA 232
           G       GH+ ++ ++    +   + SA  +  ++ W  
Sbjct: 2   GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDI 41

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.0 bits (138), Expect = 3e-10
 Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSV 209
             KI + S              + ++ + S D  + ++S +   K +   + H   VN++
Sbjct: 205 TSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNL 264

Query: 210 RFLPNKDLVLSASGDKSVHIWQAV 233
            +     LV S+  D  +  W  V
Sbjct: 265 LWETPSTLV-SSGADACIKRWNVV 287

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.5 bits (134), Expect = 1e-09
 Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 9/85 (10%)

Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
           +++ SGH  G+  + V P    L S S D  +  WS+ +         HS  + S+    
Sbjct: 6   LKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQ-----DHSNLIVSLDNSK 56

Query: 214 NKDLVLSASGDKSVHIWQAVINWEC 238
            ++    +  D           +  
Sbjct: 57  AQEYSSISWDDTLKVNGITKHEFGS 81

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.2 bits (84), Expect = 0.002
 Identities = 8/39 (20%), Positives = 17/39 (43%), Gaps = 4/39 (10%)

Query: 192 TGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
             + +   SGH+  + ++   P    ++S S D  +  W
Sbjct: 2   HDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEW 36

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.4 bits (134), Expect = 2e-09
 Identities = 20/219 (9%), Positives = 55/219 (25%), Gaps = 32/219 (14%)

Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC------VLQYSGHSGSVNSVRFL 212
            H   ++ V+      V  S S D  +++W  +             +  H   ++ V  L
Sbjct: 12  AHDADIFSVSACNSFTV--SCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 69

Query: 213 -------PNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVK 265
                      LV + S    +  +               + +  K   E    L + +K
Sbjct: 70  QAIERDAFELCLVATTSFSGDLLFY-----------RITREDETKKVIFEKLDLLDSDMK 118

Query: 266 ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPH------IL 319
           +    +    A++      +++         ++         +    +  P       + 
Sbjct: 119 KHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVE 178

Query: 320 CVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQ 358
              +     +         +  G +   +    +     
Sbjct: 179 SPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRP 217

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.4 bits (121), Expect = 7e-08
 Identities = 17/111 (15%), Positives = 34/111 (30%), Gaps = 5/111 (4%)

Query: 139 KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ 198
           + + S      S         H   V  ++       L SA  D  +R W  +T + +  
Sbjct: 267 ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITT 326

Query: 199 YSGHSGSV----NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDS 245
            + H   +    + +    + D +    G   V   +         + N+S
Sbjct: 327 LNMHCDDIEIEEDILAVDEHGDSLAEP-GVFDVKFLKKGWRSGMGADLNES 376

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.1 bits (115), Expect = 4e-07
 Identities = 32/250 (12%), Positives = 82/250 (32%), Gaps = 17/250 (6%)

Query: 72  NLNLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTN 131
            +  +D+   ++ +       + K      ++   + ++  + + V         +   +
Sbjct: 95  RITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFH 154

Query: 132 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWS-- 189
               +++ +  ++  +L     + S          V +     ++ +   + TV++    
Sbjct: 155 PFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELS 213

Query: 190 ----TQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDS 245
                   +       +S S+ SV+F P   L+  A    S                + S
Sbjct: 214 TLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLS 273

Query: 246 DLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI 305
               S +                 HS+ V++  +   GE + +A WD     +DV+T   
Sbjct: 274 VPTHSSQA----------SLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER 323

Query: 306 LQSLTGHDEE 315
           + +L  H ++
Sbjct: 324 ITTLNMHCDD 333

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.7 bits (101), Expect = 2e-05
 Identities = 22/228 (9%), Positives = 63/228 (27%), Gaps = 37/228 (16%)

Query: 153 KIRSFSGHRDGVWDVAVRPGQP-------VLGSASADRTVRLWSTQTGKC---------- 195
           K  S   H+ G+  V V            ++ + S    +  +                 
Sbjct: 52  KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLD 111

Query: 196 VLQYSGHSGSVNSVRFLPNKD-----LVLSASGDKSVHIWQAVINWECLNNDNDSDLDES 250
           +L       S  ++++  + D      +++     + +IW+     +  N+   +     
Sbjct: 112 LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN----- 166

Query: 251 KEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 310
                 ++ L+  V+  +  S    + D    G  + T   +    + ++ T        
Sbjct: 167 ---WSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRP----- 217

Query: 311 GHDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQ 358
                     + +  + +    F     L     ++         + +
Sbjct: 218 -LYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETE 264

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 54.5 bits (129), Expect = 7e-09
 Identities = 16/187 (8%), Positives = 44/187 (23%), Gaps = 26/187 (13%)

Query: 149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC-------VLQYSG 201
           +   KI + +      +  A       L   S                            
Sbjct: 166 MEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPL 225

Query: 202 HSGSVNSVRFLPNKDLVLSASGDKSVHIWQ-------------------AVINWECLNND 242
             GS N  + +P      +   D +    +                   +++ +    + 
Sbjct: 226 IPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHG 285

Query: 243 NDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET 302
             +   +        +      +++    N +      +D + V+    D     F +E 
Sbjct: 286 EFAAYYQGAPEKGVLLKYDVKTRKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEK 345

Query: 303 GTILQSL 309
               +++
Sbjct: 346 PEDERTV 352

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.2 bits (128), Expect = 7e-09
 Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 3/58 (5%)

Query: 176 LGSASADRTVRLWSTQTGKCVLQYSGHSGSV--NSVRFLPNKD-LVLSASGDKSVHIW 230
             +  AD T+R+W   T KCV +++     +    V  +   +  ++S S D +++ +
Sbjct: 266 FATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFY 323

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.0 bits (99), Expect = 3e-05
 Identities = 19/87 (21%), Positives = 31/87 (35%), Gaps = 6/87 (6%)

Query: 158 SGHRDGVWDVAVRPGQPVLGSASADRT-VRLW--STQTGKCVLQYSGHSGS-VNSVRFLP 213
           S  R+    ++  P    +         VR           V+Q++GH  S V +V+F P
Sbjct: 14  STQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSP 73

Query: 214 NKD--LVLSASGDKSVHIWQAVINWEC 238
            K    + S      V +W    + E 
Sbjct: 74  IKGSQYLCSGDESGKVIVWGWTFDKES 100

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.4 bits (87), Expect = 8e-04
 Identities = 9/49 (18%), Positives = 17/49 (34%)

Query: 279 WLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSK 327
              D ++  T   D    ++DV T   +Q  T   ++     V    + 
Sbjct: 259 SWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATG 307

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.6 bits (85), Expect = 0.002
 Identities = 16/132 (12%), Positives = 33/132 (25%), Gaps = 15/132 (11%)

Query: 118 LASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHR-DGVWDVAVRPGQP-- 174
           L+ +P+   +          S  V            +  F+GH    V  V   P +   
Sbjct: 23  LSYDPTTNAIAYPC----GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQ 78

Query: 175 VLGSASADRTVRLWSTQTGKCVLQ--------YSGHSGSVNSVRFLPNKDLVLSASGDKS 226
            L S      V +W     K            +   +G ++ + +      +      + 
Sbjct: 79  YLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRD 138

Query: 227 VHIWQAVINWEC 238
                   +   
Sbjct: 139 NFGVFISWDSGN 150

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 49.2 bits (116), Expect = 3e-07
 Identities = 15/190 (7%), Positives = 48/190 (25%), Gaps = 11/190 (5%)

Query: 136 QTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC 195
             +    +   +       +                   ++ + ++              
Sbjct: 186 SLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATM 245

Query: 196 VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDE 255
                G+     +  F      +++   +    +             + S L  ++    
Sbjct: 246 KAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMI-------LTVEHSRSCLAAAENTSS 298

Query: 256 SSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW--DRVANLFDVETGTILQSLTGHD 313
            + ++      +  + +   A     DG     A+     V +++D  +     S+   D
Sbjct: 299 VTASVGQTSGPI-SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVEL-D 356

Query: 314 EEPHILCVSS 323
           + P  L V +
Sbjct: 357 KGPESLSVQN 366

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 40.3 bits (93), Expect = 2e-04
 Identities = 15/178 (8%), Positives = 32/178 (17%), Gaps = 27/178 (15%)

Query: 162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP-------- 213
            G                     V ++   T   +           SV            
Sbjct: 75  SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCAS 134

Query: 214 NKDLVLSASGDKSVHIW-------QAVINWEC------------LNNDNDSDLDESKEPD 254
           +  L+    G  +             +                       + L  S    
Sbjct: 135 SACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAA 194

Query: 255 ESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
             +       +     +    AA     G  V   +   +         T+  ++ G+
Sbjct: 195 APAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGN 252

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 46.7 bits (110), Expect = 2e-06
 Identities = 21/166 (12%), Positives = 40/166 (24%), Gaps = 36/166 (21%)

Query: 165 WDVAV----RPGQPVLG---------SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 211
           W V V    RP Q +           +      + L    T +           V+  R 
Sbjct: 11  WKVHVAPEDRPTQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYA-VHISRL 69

Query: 212 LPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHS 271
             +   +     D  V++                DL       E +      +       
Sbjct: 70  SASGRYLFVIGRDGKVNMI---------------DLW----MKEPTTVAEIKI--GSEAR 108

Query: 272 NVVIAADWLSDGEQVI-TASWDRVANLFDVETGTILQSLTGHDEEP 316
           ++  +     + +  I  A W     + D ET    +  +      
Sbjct: 109 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTY 154

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 39.4 bits (91), Expect = 5e-04
 Identities = 14/188 (7%), Positives = 35/188 (18%), Gaps = 10/188 (5%)

Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC-----VLQYSGHSGSVNS 208
                     V    +      L     D  V +      +      +   S       S
Sbjct: 55  KTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETS 113

Query: 209 VRFLPN-KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL 267
                  K  +  A       I                   + +E        R      
Sbjct: 114 KMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEP---RVAAILA 170

Query: 268 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSK 327
             +    I     +    ++  +        ++     L          + +  ++  +K
Sbjct: 171 SHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNK 230

Query: 328 VSCDLFQR 335
           +     + 
Sbjct: 231 LVVIDTKE 238

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 46.7 bits (109), Expect = 2e-06
 Identities = 10/161 (6%), Positives = 37/161 (22%), Gaps = 10/161 (6%)

Query: 167 VAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPN-KDLVLSASGD 224
            A++ G   +   +    + +    +                +    P+ +   +  +  
Sbjct: 2   PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61

Query: 225 KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE 284
             ++      + +   N   ++L         S+        +      V A    +   
Sbjct: 62  GDIYGI----DLDTCKNTFHANLSSVPGEVGRSMYSFA----ISPDGKEVYATVNPTQRL 113

Query: 285 QVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYY 325
                       +F    G   + +        +  + +  
Sbjct: 114 NDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAAD 154

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 44.3 bits (103), Expect = 1e-05
 Identities = 13/150 (8%), Positives = 35/150 (23%), Gaps = 27/150 (18%)

Query: 164 VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG 223
                 +  +    +A           +TGK   Q       +        KD       
Sbjct: 211 YTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV 270

Query: 224 DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG 283
              +  +               DL + K            + +     +      +   G
Sbjct: 271 LNRLAKY---------------DLKQRK------------LIKAANLDHTYYCVAFDKKG 303

Query: 284 EQVITASWDRVANLFDVETGTILQSLTGHD 313
           +++          +F+ +T   ++++    
Sbjct: 304 DKLYLGGTFNDLAVFNPDTLEKVKNIKLPG 333

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 39.0 bits (89), Expect = 5e-04
 Identities = 8/64 (12%), Positives = 20/64 (31%), Gaps = 2/64 (3%)

Query: 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV--LQYSGHSGSVNSV 209
            K+   +      + VA       L        + +++  T + V  ++  G   S  + 
Sbjct: 282 RKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGDMSTTTP 341

Query: 210 RFLP 213
           +   
Sbjct: 342 QVFI 345

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 43.8 bits (102), Expect = 2e-05
 Identities = 12/133 (9%), Positives = 29/133 (21%), Gaps = 22/133 (16%)

Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 218
             R       +        +      + L    + K V         V+  R   +   +
Sbjct: 18  EDRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYL 76

Query: 219 LSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAAD 278
           L    D  + +                      +      T    +K  +   +V  +  
Sbjct: 77  LVIGRDARIDMI---------------------DLWAKEPTKVAEIKIGIEARSVESSKF 115

Query: 279 WLSDGEQVITASW 291
              +    I  ++
Sbjct: 116 KGYEDRYTIAGAY 128

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 41.4 bits (95), Expect = 9e-05
 Identities = 8/70 (11%), Positives = 17/70 (24%), Gaps = 2/70 (2%)

Query: 178 SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN-KDLVLSASGDKSVHIWQAVINW 236
           + S    + +    + K        S         P+   + ++ +    V I     N 
Sbjct: 7   ANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNN 65

Query: 237 ECLNNDNDSD 246
                   S 
Sbjct: 66  VIATVPAGSS 75

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 38.3 bits (87), Expect = 0.001
 Identities = 11/44 (25%), Positives = 15/44 (34%), Gaps = 2/44 (4%)

Query: 154 IRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCV 196
                   D    +AV P G+ V  + S   TV +  T T    
Sbjct: 237 TARIPVGPD-PAGIAVTPDGKKVYVALSFCNTVSVIDTATNTIT 279

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 39.0 bits (89), Expect = 6e-04
 Identities = 20/190 (10%), Positives = 50/190 (26%), Gaps = 16/190 (8%)

Query: 178 SASADRTVRLWSTQTGKCV--LQYSGHSGSVNSVRFLPN-KDLVLSASGDKSVHIWQAVI 234
           + +    + +  T+       +  +    +       P  +    + +  +S+     V 
Sbjct: 6   APARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT 65

Query: 235 NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRV 294
                  D  +  +  K    ++++              +   +     E          
Sbjct: 66  GETLGRIDLSTPEERVKSLFGAALS---------PDGKTLAIYESPVRLELTHFEVQPTR 116

Query: 295 ANLFDVETGTILQSLTGHDEEPHILCVSSYYSKV---SCDLFQRIQHLDCGTSENPIHSV 351
             L+D ET +  ++      +  +L  +   SK+     DL            + PI S 
Sbjct: 117 VALYDAETLSRRKAFEAPR-QITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSW 175

Query: 352 CVFQDIQSTG 361
                 Q   
Sbjct: 176 EAETYAQPDV 185

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 38.6 bits (88), Expect = 9e-04
 Identities = 6/59 (10%), Positives = 14/59 (23%), Gaps = 4/59 (6%)

Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV----LQYSGHSGSVNSVRFLP 213
                 + V V      +    A   +  +  +T +      L  +      +   F  
Sbjct: 277 PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASVRLFTR 335

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 38.2 bits (87), Expect = 0.001
 Identities = 11/151 (7%), Positives = 31/151 (20%), Gaps = 28/151 (18%)

Query: 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL 219
                     R         +    +     +TG+  ++             +       
Sbjct: 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRA 255

Query: 220 SASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADW 279
                  +  +               DL+++               + +   +   + + 
Sbjct: 256 -FGAYNVLESF---------------DLEKNA------------SIKRVPLPHSYYSVNV 287

Query: 280 LSDGEQVITASWDRVANLFDVETGTILQSLT 310
            +DG  V           +D ET      + 
Sbjct: 288 STDGSTVWLGGALGDLAAYDAETLEKKGQVD 318

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} Length = 302

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

 Score = 38.5 bits (88), Expect = 8e-04
 Identities = 11/75 (14%), Positives = 26/75 (34%), Gaps = 2/75 (2%)

Query: 164 VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG 223
           + ++A  P   +  +      +   +         ++   G V+ + F  N DLV +   
Sbjct: 30  LENLASAPDGTIFVTNHEVGEIVSITPDGN--QQIHATVEGKVSGLAFTSNGDLVATGWN 87

Query: 224 DKSVHIWQAVINWEC 238
             S+ +   V +   
Sbjct: 88  ADSIPVVSLVKSDGT 102

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	361
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.96
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.95
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.94
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.94
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.94
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.93
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.92
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.92
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.92
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.92
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.91
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.91
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.9
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.9
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.9
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.9
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.9
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.9
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.9
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.89
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.88
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.87
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.85
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.85
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.83
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.82
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.81
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.72
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.71
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.71
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.7
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.61
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.56
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.54
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.47
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.47
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.42
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.37
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.36
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.36
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.25
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.24
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.17
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.15
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.14
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	98.99
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	98.98
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	98.84
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	98.82
d1uuja_	76	Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-te	98.77
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	98.72
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.41
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	98.34
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	98.24
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	98.02
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.01
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	97.85
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	97.83
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	97.66
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	97.61
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	97.54
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	97.41
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	97.41
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	97.4
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	97.36
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	97.34
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	97.15
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	96.97
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	96.93
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	96.92
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	96.78
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	96.58
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	94.67
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	94.1
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	93.66
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	93.3
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	93.02
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	92.5
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	91.97
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	90.05
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	89.03
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	88.63
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	88.61
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	88.58
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	87.66
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	87.4
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	86.81
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	86.65
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	82.54
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	81.43
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	81.18
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	80.55

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.96  E-value=7.2e-28  Score=210.99  Aligned_cols=198  Identities=18%  Similarity=0.198  Sum_probs=153.9

Q ss_pred             eeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430         153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       153 ~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~  232 (361)
                      ..++|+||.++|++++|+|++.+|++|+.||+|++||+.+++.+..+..|...|.+++|+|++.++++|+.|+.+.+|+.
T Consensus        47 ~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~  126 (340)
T d1tbga_          47 TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL  126 (340)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEES
T ss_pred             eeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeecccc
Confidence            45678999999999999999999999999999999999999999999999999999999999999999999999999997


Q ss_pred             cccccccCCCC----CCCCC------------------------------------------C-CCCCCCC---------
Q psy8430         233 VINWECLNNDN----DSDLD------------------------------------------E-SKEPDES---------  256 (361)
Q Consensus       233 ~~~~~~~~~~~----~~~~~------------------------------------------~-~~~~~~~---------  256 (361)
                      ...........    .....                                          . .......         
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  206 (340)
T d1tbga_         127 KTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDA  206 (340)
T ss_dssp             SSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTT
T ss_pred             cccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecCc
Confidence            65432111000    00000                                          0 0000000         


Q ss_pred             ---c--eecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee--cCCCCCeE--------EEE
Q psy8430         257 ---S--ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT--GHDEEPHI--------LCV  321 (361)
Q Consensus       257 ---~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~--~h~~~v~~--------~~~  321 (361)
                         .  .....+...+.+|...|++++|+|++.+|++|+.|+.|++||++....+..+.  .+...+..        +++
T Consensus       207 ~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  286 (340)
T d1tbga_         207 SAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLL  286 (340)
T ss_dssp             EEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEE
T ss_pred             eEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCCCEEE
Confidence               0  01223456778899999999999999999999999999999999988887764  34555666        455


Q ss_pred             EcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         322 SSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       322 s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      +++     .||.|+||  |+   +. ..++..+.||.++|
T Consensus       287 ~g~-----~dg~i~iw--d~---~~-~~~~~~~~~H~~~V  315 (340)
T d1tbga_         287 AGY-----DDFNCNVW--DA---LK-ADRAGVLAGHDNRV  315 (340)
T ss_dssp             EEE-----TTSCEEEE--ET---TT-CCEEEEECCCSSCE
T ss_pred             EEE-----CCCEEEEE--EC---CC-CcEEEEEcCCCCCE
Confidence            555     89999999  77   33 56788999998764

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.95  E-value=6e-26  Score=202.56  Aligned_cols=199  Identities=17%  Similarity=0.176  Sum_probs=159.3

Q ss_pred             eccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE--EEEEeCCCCCeEEEEEe
Q psy8430         135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYSGHSGSVNSVRFL  212 (361)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~--~~~~~~h~~~v~~v~~~  212 (361)
                      +..+..+..|.....+...+..+++|.++|++++|+|++++|++|+.|++|++||+.++..  ...+.+|...|.+++|+
T Consensus        25 ~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~  104 (371)
T d1k8kc_          25 CPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWA  104 (371)
T ss_dssp             ECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEEC
T ss_pred             EeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccccccccccccccccccccccc
Confidence            4445667778777777788999999999999999999999999999999999999987753  44556889999999999


Q ss_pred             cCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy8430         213 PNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD  292 (361)
Q Consensus       213 ~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d  292 (361)
                      |+++.|++++.|+++++|++.....                      .........+|...|.+++|+|++.+|++|+.|
T Consensus       105 p~~~~l~~~s~d~~i~i~~~~~~~~----------------------~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D  162 (371)
T d1k8kc_         105 PNEKKFAVGSGSRVISICYFEQEND----------------------WWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD  162 (371)
T ss_dssp             TTSSEEEEEETTSSEEEEEEETTTT----------------------EEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred             cccccceeecccCcceeeeeecccc----------------------cccccccccccccccccccccccccceeccccC
Confidence            9999999999999999998765421                      111233455788999999999999999999999


Q ss_pred             CcEEEeeCCC------------------CeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceee
Q psy8430         293 RVANLFDVET------------------GTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSV  351 (361)
Q Consensus       293 ~~v~iwd~~~------------------~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v  351 (361)
                      +.|++||...                  +..+....+|...+.++.++++..   ..+.||.|++|  |.   +. ..++
T Consensus       163 ~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iw--d~---~~-~~~~  236 (371)
T d1k8kc_         163 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLA--DA---DK-KMAV  236 (371)
T ss_dssp             SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEE--EG---GG-TTEE
T ss_pred             cEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEE--ee---ec-ccce
Confidence            9999999764                  245666778888888765555422   23489999999  77   33 4567


Q ss_pred             eeecccccCC
Q psy8430         352 CVFQDIQSTG  361 (361)
Q Consensus       352 ~~~~~h~~~~  361 (361)
                      ..+.+|..+|
T Consensus       237 ~~~~~~~~~v  246 (371)
T d1k8kc_         237 ATLASETLPL  246 (371)
T ss_dssp             EEEECSSCCE
T ss_pred             eeeecccccc
Confidence            7888887653

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.94  E-value=1e-25  Score=196.20  Aligned_cols=167  Identities=14%  Similarity=0.119  Sum_probs=141.5

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE--EEEEeCCCCCeEEEEEecCCCEEEEEECC--
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYSGHSGSVNSVRFLPNKDLVLSASGD--  224 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~~~d--  224 (361)
                      .+....+.+.+|.+.|++++|+|+|++|++|+.||+|++||+.++..  ...+.+|...|.+++|+|+++++++++.+  
T Consensus        46 ~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~  125 (311)
T d1nr0a1          46 GSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRE  125 (311)
T ss_dssp             TCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSS
T ss_pred             CCCceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeeccccccccccccccCcccccccccccccccccccccc
Confidence            45567777899999999999999999999999999999999988753  45678899999999999999999998864  


Q ss_pred             CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCE-EEEEeCCCcEEEeeCCCC
Q psy8430         225 KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQ-VITASWDRVANLFDVETG  303 (361)
Q Consensus       225 ~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~d~~v~iwd~~~~  303 (361)
                      +.+++|++.++.                          +...+.+|...|.+++|+|++++ +++|+.|+.|++||++++
T Consensus       126 ~~~~v~~~~~~~--------------------------~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~  179 (311)
T d1nr0a1         126 RFGHVFLFDTGT--------------------------SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF  179 (311)
T ss_dssp             CSEEEEETTTCC--------------------------BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB
T ss_pred             cccccccccccc--------------------------ccccccccccccccccccccceeeeccccccccccccccccc
Confidence            569999987652                          45567789999999999999985 788999999999999999


Q ss_pred             eEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCC
Q psy8430         304 TILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGT  343 (361)
Q Consensus       304 ~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~  343 (361)
                      ++...+.+|...|.++.+++.+.   ..+.||.|++|  |..+
T Consensus       180 ~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~--d~~~  220 (311)
T d1nr0a1         180 KFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLY--NGVD  220 (311)
T ss_dssp             EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE--ETTT
T ss_pred             ccccccccccccccccccCcccccccccccccccccc--cccc
Confidence            99999999999999855544422   12389999999  7643

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.94  E-value=2.5e-25  Score=193.71  Aligned_cols=193  Identities=17%  Similarity=0.160  Sum_probs=158.2

Q ss_pred             eeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCCeEEEEEeCCCCCeEEEEE
Q psy8430         134 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASA--DRTVRLWSTQTGKCVLQYSGHSGSVNSVRF  211 (361)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~--d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~  211 (361)
                      .+..+..+..|............+.+|.++|.+++|+|++.+|++++.  +..+++|++++++....+.+|...|.+++|
T Consensus        75 tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~  154 (311)
T d1nr0a1          75 SGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDF  154 (311)
T ss_dssp             EEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEE
T ss_pred             ccccCceEeeeeeeccccccccccccccCccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            444555666777766666677788999999999999999999999986  456999999999988899999999999999


Q ss_pred             ecCCCE-EEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe
Q psy8430         212 LPNKDL-VLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS  290 (361)
Q Consensus       212 ~~~~~~-l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~  290 (361)
                      +|++++ |++|+.|+.|++||+++.                          .....+.+|...|.++.|+|+++++++++
T Consensus       155 ~~~~~~~l~sgs~d~~i~i~d~~~~--------------------------~~~~~~~~~~~~i~~v~~~p~~~~l~~~~  208 (311)
T d1nr0a1         155 KPSRPFRIISGSDDNTVAIFEGPPF--------------------------KFKSTFGEHTKFVHSVRYNPDGSLFASTG  208 (311)
T ss_dssp             CSSSSCEEEEEETTSCEEEEETTTB--------------------------EEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred             cccceeeeccccccccccccccccc--------------------------ccccccccccccccccccCcccccccccc
Confidence            998885 888999999999998765                          25667788999999999999999999999


Q ss_pred             CCCcEEEeeCCCCeEEEEee-------cCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeeeecccc
Q psy8430         291 WDRVANLFDVETGTILQSLT-------GHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQ  358 (361)
Q Consensus       291 ~d~~v~iwd~~~~~~~~~~~-------~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~  358 (361)
                      .|+.|++||..++..+..+.       +|...|.++.+++...   ..+.||.|+||  |+   +. ..++..+..|.
T Consensus       209 ~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iw--d~---~t-~~~~~~l~~~~  280 (311)
T d1nr0a1         209 GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIW--NV---AT-LKVEKTIPVGT  280 (311)
T ss_dssp             TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEE--ET---TT-TEEEEEEECCS
T ss_pred             ccccccccccccccccccccccccccccccccccccccCCCCCEEEEEeCCCeEEEE--EC---CC-CcEEEEEECCC
Confidence            99999999999988877764       5777888854443311   12389999999  87   33 45677777664

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.94  E-value=7e-25  Score=191.70  Aligned_cols=165  Identities=18%  Similarity=0.259  Sum_probs=135.8

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC-------------------------------------
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ-------------------------------------  191 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~-------------------------------------  191 (361)
                      .+++.+..+.+|.++|.+++|+|++.++++|+.|+.+++|+..                                     
T Consensus        85 ~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (340)
T d1tbga_          85 YTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDT  164 (340)
T ss_dssp             TTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTT
T ss_pred             ccceeEEEEecccccEEeeEeeccceeeeeecccceeecccccccccccccceecccccccccccccccccccccccccc
Confidence            4567788899999999999999999999998888888877643                                     


Q ss_pred             --------------------------------------------------CCeEEEEEeCCCCCeEEEEEecCCCEEEEE
Q psy8430         192 --------------------------------------------------TGKCVLQYSGHSGSVNSVRFLPNKDLVLSA  221 (361)
Q Consensus       192 --------------------------------------------------~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~  221 (361)
                                                                        +++++..+.+|...|.+++|+|++++|++|
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~  244 (340)
T d1tbga_         165 TCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATG  244 (340)
T ss_dssp             EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred             cccccccccccccccccccceeEeeeccccccceeEEeecCceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEE
Confidence                                                              233445567899999999999999999999


Q ss_pred             ECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCC
Q psy8430         222 SGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  301 (361)
Q Consensus       222 ~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~  301 (361)
                      +.||.|++||++.....                        .......+...+.+++|+|++++|++|+.||.|++||+.
T Consensus       245 s~d~~i~~~~~~~~~~~------------------------~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~  300 (340)
T d1tbga_         245 SDDATCRLFDLRADQEL------------------------MTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL  300 (340)
T ss_dssp             ETTSCEEEEETTTTEEE------------------------EEECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETT
T ss_pred             eCCCeEEEEeecccccc------------------------cccccccccCceEEEEECCCCCEEEEEECCCEEEEEECC
Confidence            99999999998755221                        111223566789999999999999999999999999999


Q ss_pred             CCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEE
Q psy8430         302 TGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQ  337 (361)
Q Consensus       302 ~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW  337 (361)
                      +++++.++.+|.+.|.++.++.+..   ..+.||.|+||
T Consensus       301 ~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iW  339 (340)
T d1tbga_         301 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW  339 (340)
T ss_dssp             TCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred             CCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEe
Confidence            9999999999999999966555422   22499999999

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=1.5e-24  Score=186.99  Aligned_cols=170  Identities=26%  Similarity=0.424  Sum_probs=149.6

Q ss_pred             eeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430         153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       153 ~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~  232 (361)
                      ..++|+||.++|++++|+|++++|+||+.||+|++||+.+++.+.++.+|...|.+++|+|++..+++++.++.+.+|+.
T Consensus         9 ~~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (317)
T d1vyhc1           9 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF   88 (317)
T ss_dssp             CSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred             ccEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeecccccccccccccccccccc
Confidence            34678999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecC
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH  312 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h  312 (361)
                      ...                          .....+.+|...+.++.|+|++.++++++.|+.+++||+++++.+..+.+|
T Consensus        89 ~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  142 (317)
T d1vyhc1          89 QGF--------------------------ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH  142 (317)
T ss_dssp             TSS--------------------------CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred             ccc--------------------------ccccccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccC
Confidence            644                          234455678999999999999999999999999999999999999999999


Q ss_pred             CCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeeccccc
Q psy8430         313 DEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQS  359 (361)
Q Consensus       313 ~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~  359 (361)
                      ...+.+        ++++++     .||.|++|  +.   +. ..++..+.+|..
T Consensus       143 ~~~~~~~~~~~~~~~l~~~~-----~d~~v~~~--~~---~~-~~~~~~~~~~~~  186 (317)
T d1vyhc1         143 REWVRMVRPNQDGTLIASCS-----NDQTVRVW--VV---AT-KECKAELREHRH  186 (317)
T ss_dssp             SSCEEEEEECTTSSEEEEEE-----TTSCEEEE--ET---TT-CCEEEEECCCSS
T ss_pred             CCcceeeecccCCCEEEEEe-----CCCeEEEE--ee---cc-ceeeEEEecCCC
Confidence            988877        455566     99999999  77   33 445666776654

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.92  E-value=6.3e-24  Score=183.07  Aligned_cols=206  Identities=11%  Similarity=0.051  Sum_probs=142.5

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe-CCCCCeEEEEEecCCCEEEEEECCCcEEE
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNKDLVLSASGDKSVHI  229 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d~~i~l  229 (361)
                      |.+.+.++||.++|++++|+|+|++|++|+.||+|++||+.+++.+..+. +|...|.+++|+|++. +++++.|+.+++
T Consensus         2 g~~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~~~~~~d~~v~~   80 (299)
T d1nr0a2           2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGD-LFTVSWDDHLKV   80 (299)
T ss_dssp             TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSC-EEEEETTTEEEE
T ss_pred             CccceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccce-eecccceeeEEE
Confidence            46778999999999999999999999999999999999999999888874 6899999999999986 556778999999


Q ss_pred             EeccccccccCCCCCCCCCC-----CCCCCCCce--------eccc-ccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcE
Q psy8430         230 WQAVINWECLNNDNDSDLDE-----SKEPDESSI--------TLRT-PVKELLGHSNVVIAADWLSDGEQVITASWDRVA  295 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~-----~~~~~~~~~--------~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v  295 (361)
                      |+..................     ...++....        .... ...........+.+++|+|+++++++|+.|+.|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i  160 (299)
T d1nr0a2          81 VPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKV  160 (299)
T ss_dssp             ECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEE
T ss_pred             eccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99765432111100000000     000111000        0000 001111234567889999999999999999999


Q ss_pred             EEeeCCCCeEEE-EeecCCCCCeEEEEEcCCCc---ccCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430         296 NLFDVETGTILQ-SLTGHDEEPHILCVSSYYSK---VSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST  360 (361)
Q Consensus       296 ~iwd~~~~~~~~-~~~~h~~~v~~~~~s~s~~~---v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~  360 (361)
                      ++||+++++... ....|...|.++.+++....   .+.||.|++|  |..++.. ......+.+|...
T Consensus       161 ~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~--~~~~~~~-~~~~~~~~~h~~~  226 (299)
T d1nr0a2         161 HVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPY--SVANNFE-LAHTNSWTFHTAK  226 (299)
T ss_dssp             EEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEE--EGGGTTE-ESCCCCCCCCSSC
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccc--ccccccc-ccccccccccccc
Confidence            999999887654 34568888888444433111   1389999999  7643322 4445667777764

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=1.8e-23  Score=180.09  Aligned_cols=163  Identities=24%  Similarity=0.412  Sum_probs=145.7

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC--------------
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN--------------  214 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~--------------  214 (361)
                      .+++.+..+.+|...+.+++|+|++.+|++|+.|+.|++|++.+++.+..+.+|...+.++.|+|+              
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  210 (317)
T d1vyhc1         131 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSET  210 (317)
T ss_dssp             TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-
T ss_pred             ccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeeccceeeEEEecCCCCceEEEEeeccccceeecccccee
Confidence            455778889999999999999999999999999999999999999999999999999999999875              


Q ss_pred             ------CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEE
Q psy8430         215 ------KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT  288 (361)
Q Consensus       215 ------~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s  288 (361)
                            +..+++++.|+.|++||++++                          .++..+.+|...|.+++|+|++++|++
T Consensus       211 ~~~~~~~~~~~~~~~d~~i~~~~~~~~--------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~s  264 (317)
T d1vyhc1         211 KKSGKPGPFLLSGSRDKTIKMWDVSTG--------------------------MCLMTLVGHDNWVRGVLFHSGGKFILS  264 (317)
T ss_dssp             ------CCEEEEEETTSEEEEEETTTT--------------------------EEEEEEECCSSCEEEEEECSSSSCEEE
T ss_pred             eeeccCCceeEeccCCCEEEEEECCCC--------------------------cEEEEEeCCCCCEEEEEECCCCCEEEE
Confidence                  346899999999999998765                          367788899999999999999999999


Q ss_pred             EeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEE
Q psy8430         289 ASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQ  337 (361)
Q Consensus       289 ~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW  337 (361)
                      |+.||.|++||+++++++.++.+|.+.|.++.++....   ..+.||+|+||
T Consensus       265 ~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iW  316 (317)
T d1vyhc1         265 CADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW  316 (317)
T ss_dssp             EETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEE
T ss_pred             EECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEe
Confidence            99999999999999999999999999999855554321   22499999999

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=5.4e-24  Score=191.27  Aligned_cols=147  Identities=18%  Similarity=0.260  Sum_probs=119.9

Q ss_pred             eccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe------CCCCCeEEEEEecCCCEEEEEECCCc---EE
Q psy8430         158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS------GHSGSVNSVRFLPNKDLVLSASGDKS---VH  228 (361)
Q Consensus       158 ~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~------~h~~~v~~v~~~~~~~~l~s~~~d~~---i~  228 (361)
                      ..+...+++++|+|++ +|++|+.|++|++||+.+++.+..+.      +|..+|.+++|+|++++|++|+.|++   |+
T Consensus       181 ~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~  259 (393)
T d1sq9a_         181 MTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCIT  259 (393)
T ss_dssp             SSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEE
T ss_pred             cCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCcceee
Confidence            3466779999999998 99999999999999999998876553      68999999999999999999999874   89


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEE
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS  308 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~  308 (361)
                      +||+.++........             ..........+.+|.+.|++++|+|++++|++|+.|++|++||+++|+++.+
T Consensus       260 lwd~~~g~~~~~l~~-------------~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~  326 (393)
T d1sq9a_         260 LYETEFGERIGSLSV-------------PTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITT  326 (393)
T ss_dssp             EEETTTCCEEEEECB-------------C--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred             ecccccceeeeeecc-------------ccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEE
Confidence            999987644321100             0011123344568999999999999999999999999999999999999999


Q ss_pred             eecCCCCCeE
Q psy8430         309 LTGHDEEPHI  318 (361)
Q Consensus       309 ~~~h~~~v~~  318 (361)
                      +.+|.+.|..
T Consensus       327 l~gH~~~v~~  336 (393)
T d1sq9a_         327 LNMHCDDIEI  336 (393)
T ss_dssp             EECCGGGCSS
T ss_pred             ECCcCCcccC
Confidence            9999887764

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3e-23  Score=182.33  Aligned_cols=162  Identities=17%  Similarity=0.208  Sum_probs=140.1

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEE
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  228 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~  228 (361)
                      .+.++.....+|...|++++|++++..+++|+.|+.|++||+++++.+..+. |...|.+++|+|+++.+++++.|+.++
T Consensus       171 ~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~d~~i~  249 (337)
T d1gxra_         171 HNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVE  249 (337)
T ss_dssp             TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccceeecccc-cccceEEEEEcccccccceeccccccc
Confidence            4556778888999999999999999999999999999999999999888776 899999999999999999999999999


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEE
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS  308 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~  308 (361)
                      +||++++                           .......|...|.+++|+|++++|++++.||.|++||+.+++++..
T Consensus       250 i~d~~~~---------------------------~~~~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~  302 (337)
T d1gxra_         250 VLHVNKP---------------------------DKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ  302 (337)
T ss_dssp             EEETTSS---------------------------CEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred             ccccccc---------------------------ccccccccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEE
Confidence            9999765                           3345668999999999999999999999999999999999999887


Q ss_pred             eecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCC
Q psy8430         309 LTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDC  341 (361)
Q Consensus       309 ~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~  341 (361)
                      +. |...|.++.++++..   ..+.||.|+||  |+
T Consensus       303 ~~-~~~~v~~~~~s~d~~~l~t~s~D~~I~vW--dl  335 (337)
T d1gxra_         303 SK-ESSSVLSCDISVDDKYIVTGSGDKKATVY--EV  335 (337)
T ss_dssp             EE-CSSCEEEEEECTTSCEEEEEETTSCEEEE--EE
T ss_pred             cc-CCCCEEEEEEeCCCCEEEEEeCCCeEEEE--EE
Confidence            65 677787744443311   11399999999  64

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=1.1e-22  Score=177.77  Aligned_cols=191  Identities=18%  Similarity=0.144  Sum_probs=149.1

Q ss_pred             eccceeEEeeecCcc------ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCCeEEEEEeCCCCCe
Q psy8430         135 VQTSKIVSSFKTSLL------SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASA--DRTVRLWSTQTGKCVLQYSGHSGSV  206 (361)
Q Consensus       135 ~~~~~~~~~~~~~~~------~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~--d~~i~~wd~~~~~~~~~~~~h~~~v  206 (361)
                      +..+..+.+|.....      .......+..|.++|.+++|++++.+|++++.  ++.+++|+.++++.+..+.+|...|
T Consensus        83 gs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v  162 (325)
T d1pgua1          83 GDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRI  162 (325)
T ss_dssp             EETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCE
T ss_pred             EeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeeeeccccc
Confidence            444455555654331      22333456789999999999999999888765  6789999999999999999999999


Q ss_pred             EEEEEecCCCE-EEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC-CC
Q psy8430         207 NSVRFLPNKDL-VLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD-GE  284 (361)
Q Consensus       207 ~~v~~~~~~~~-l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~  284 (361)
                      .+++|+|++.. +++++.|+.+++||....+..                       .......+|...|.+++|+|+ +.
T Consensus       163 ~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~-----------------------~~~~~~~~~~~~v~~v~~~pd~~~  219 (325)
T d1pgua1         163 NACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFS-----------------------ASDRTHHKQGSFVRDVEFSPDSGE  219 (325)
T ss_dssp             EEEEECSSSSCEEEEEETTTEEEEEETTTBEEE-----------------------EEECSSSCTTCCEEEEEECSTTCC
T ss_pred             ccccccccccceEEEeecccccccccccccccc-----------------------eecccccCCCCccEEeeeccccce
Confidence            99999998775 778999999999998644211                       122233467888999999996 68


Q ss_pred             EEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE-----------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeee
Q psy8430         285 QVITASWDRVANLFDVETGTILQSLTGHDEEPHI-----------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCV  353 (361)
Q Consensus       285 ~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~-----------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~  353 (361)
                      ++++++.|+.|++||+++++++.++.+|...+..           ++++++     .|+.|+||  |+   +. .+++..
T Consensus       220 ~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s-----~D~~i~iw--d~---~~-~~~~~~  288 (325)
T d1pgua1         220 FVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVG-----ADATIRVW--DV---TT-SKCVQK  288 (325)
T ss_dssp             EEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEE-----TTSEEEEE--ET---TT-TEEEEE
T ss_pred             eccccccccceeeeeeccccccccccccccccccceeeeeccCCCEEEEEe-----CCCeEEEE--EC---CC-CCEEEE
Confidence            9999999999999999999999999988877654           455666     99999999  77   33 456676


Q ss_pred             eccccc
Q psy8430         354 FQDIQS  359 (361)
Q Consensus       354 ~~~h~~  359 (361)
                      +.+|..
T Consensus       289 ~~~~~~  294 (325)
T d1pgua1         289 WTLDKQ  294 (325)
T ss_dssp             EECCTT
T ss_pred             EEecCC
Confidence            766654

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=1.4e-22  Score=180.79  Aligned_cols=193  Identities=20%  Similarity=0.318  Sum_probs=142.8

Q ss_pred             eccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecccccc
Q psy8430         158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE  237 (361)
Q Consensus       158 ~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~  237 (361)
                      .+|...|++++|+|+|++|++|+.||+|++||...++.+..+.+|...|.+++|++++..+++++.++.+++||..+...
T Consensus       118 ~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~  197 (388)
T d1erja_         118 PSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC  197 (388)
T ss_dssp             -CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred             cCCCCCEEEEEECCCCCcceecccccccccccccccccccccccccccccccccccccccccccccceeeeeeecccccc
Confidence            46778899999999999999999999999999999999999999999999999999999999999999999999987654


Q ss_pred             ccCCCCCCCCCC-------------CCCCCCC-ce---------ecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc
Q psy8430         238 CLNNDNDSDLDE-------------SKEPDES-SI---------TLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRV  294 (361)
Q Consensus       238 ~~~~~~~~~~~~-------------~~~~~~~-~~---------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~  294 (361)
                      ............             ....... .+         ..........+|...|.+++|+|++++|++++.||.
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~  277 (388)
T d1erja_         198 SLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS  277 (388)
T ss_dssp             EEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred             ccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCc
Confidence            332111110000             0000000 00         001122234568899999999999999999999999


Q ss_pred             EEEeeCCCCe------------EEEEeecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeee
Q psy8430         295 ANLFDVETGT------------ILQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVF  354 (361)
Q Consensus       295 v~iwd~~~~~------------~~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~  354 (361)
                      |++||++++.            +......|...|.+        ++++++     .||.|++|  |+   +. ..++.+|
T Consensus       278 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~-----~dg~i~vw--d~---~~-~~~~~~l  346 (388)
T d1erja_         278 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGS-----KDRGVLFW--DK---KS-GNPLLML  346 (388)
T ss_dssp             EEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEE-----TTSEEEEE--ET---TT-CCEEEEE
T ss_pred             EEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEe-----CCCEEEEE--EC---CC-CcEEEEE
Confidence            9999997643            34555677888777        455555     99999999  77   33 5678899


Q ss_pred             cccccCC
Q psy8430         355 QDIQSTG  361 (361)
Q Consensus       355 ~~h~~~~  361 (361)
                      +||.+.|
T Consensus       347 ~~H~~~V  353 (388)
T d1erja_         347 QGHRNSV  353 (388)
T ss_dssp             ECCSSCE
T ss_pred             eCCCCCE
Confidence            9998754

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=1.1e-22  Score=177.95  Aligned_cols=157  Identities=17%  Similarity=0.183  Sum_probs=130.2

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEe---CCCCCeEEEEEecC-CCEEEEEECC
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYS---GHSGSVNSVRFLPN-KDLVLSASGD  224 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~---~h~~~v~~v~~~~~-~~~l~s~~~d  224 (361)
                      +++.+..+.+|...|.+++|+|++. ++++++.|+.|++||...++....+.   +|...|.+++|+|+ +.+|++++.|
T Consensus       148 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d  227 (325)
T d1pgua1         148 SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD  227 (325)
T ss_dssp             TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETT
T ss_pred             ccccceeeeecccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEEeeeccccceeccccccc
Confidence            4577888999999999999999887 47889999999999998887666653   57788999999996 6889999999


Q ss_pred             CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEc---CCCCEEEEEeCCCcEEEeeCC
Q psy8430         225 KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL---SDGEQVITASWDRVANLFDVE  301 (361)
Q Consensus       225 ~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~l~s~~~d~~v~iwd~~  301 (361)
                      +.|++||++++                          ..+..+.+|..++.++.|+   |+|++|++++.|+.|+|||++
T Consensus       228 ~~i~iwd~~~~--------------------------~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~  281 (325)
T d1pgua1         228 RKISCFDGKSG--------------------------EFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVT  281 (325)
T ss_dssp             CCEEEEETTTC--------------------------CEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETT
T ss_pred             cceeeeeeccc--------------------------cccccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECC
Confidence            99999998765                          2456667777665544444   689999999999999999999


Q ss_pred             CCeEEEEeecCCCCCeE-----------EEEEcCCCcccCCCeEEEE
Q psy8430         302 TGTILQSLTGHDEEPHI-----------LCVSSYYSKVSCDLFQRIQ  337 (361)
Q Consensus       302 ~~~~~~~~~~h~~~v~~-----------~~~s~s~~~v~~dg~i~iW  337 (361)
                      +++++..+..|...+..           .+++++     .||.|+||
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s-----~dg~i~vw  323 (325)
T d1pgua1         282 TSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLS-----LDGTLNFY  323 (325)
T ss_dssp             TTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEE-----TTSCEEEE
T ss_pred             CCCEEEEEEecCCcccCeEEEEEECCCCEEEEEE-----CCCEEEEE
Confidence            99999998877665331           556666     99999999

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.90  E-value=2.1e-22  Score=179.30  Aligned_cols=198  Identities=15%  Similarity=0.075  Sum_probs=153.8

Q ss_pred             ccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE----EEEEeCCCCCeEEEEE
Q psy8430         136 QTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC----VLQYSGHSGSVNSVRF  211 (361)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~----~~~~~~h~~~v~~v~~  211 (361)
                      ..+..+..|............+.+|...|++++|+|+++.|++|+.|++|++|++.....    ......|...|.+++|
T Consensus        70 s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~  149 (371)
T d1k8kc_          70 GTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDW  149 (371)
T ss_dssp             ETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEE
T ss_pred             ECCCeEEEEeecccccccccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccc
Confidence            344455666666666677777889999999999999999999999999999999876532    3334578999999999


Q ss_pred             ecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC
Q psy8430         212 LPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW  291 (361)
Q Consensus       212 ~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~  291 (361)
                      +|++.+|++|+.|+++++|++............        ................+|...|.+++|+|+|+++++++.
T Consensus       150 ~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~  221 (371)
T d1k8kc_         150 HPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPT--------PWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH  221 (371)
T ss_dssp             CTTSSEEEEEETTSCEEEEECCCTTTSCCCCCB--------TTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEET
T ss_pred             cccccceeccccCcEEEEEeeccCccccccccc--------cccccccceeeeeeccCccCcEEEEEeeccccccccccc
Confidence            999999999999999999998754321111000        000111222355667789999999999999999999999


Q ss_pred             CCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC--cccCCCeEEEEcCCC
Q psy8430         292 DRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS--KVSCDLFQRIQHLDC  341 (361)
Q Consensus       292 d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~--~v~~dg~i~iW~~d~  341 (361)
                      |+.|++||+.++..+..+..|..+|.++.++++..  ..+.|+.+++|.++.
T Consensus       222 d~~i~iwd~~~~~~~~~~~~~~~~v~s~~fs~d~~~la~g~d~~~~~~~~~~  273 (371)
T d1k8kc_         222 DSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDS  273 (371)
T ss_dssp             TTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred             CCcceEEeeecccceeeeecccccceeeeecCCCCEEEEEcCCceEEEEeeC
Confidence            99999999999999999999999999877766522  335788888884454

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=1.4e-22  Score=180.78  Aligned_cols=170  Identities=24%  Similarity=0.274  Sum_probs=131.7

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEE-------eCCCCCeEEEEEecCCCEEEEEEC
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-------SGHSGSVNSVRFLPNKDLVLSASG  223 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~-------~~h~~~v~~v~~~~~~~~l~s~~~  223 (361)
                      .........+...+..+.+.+++.+|++|+.|+.|++||..++.....+       .+|...|.+++|+|++++|++++.
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~  274 (388)
T d1erja_         195 GQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL  274 (388)
T ss_dssp             TEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEET
T ss_pred             cccccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEEC
Confidence            3444445555554444444458899999999999999999988766654       368899999999999999999999


Q ss_pred             CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC
Q psy8430         224 DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  303 (361)
Q Consensus       224 d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~  303 (361)
                      ||.|++||+.+........              .............|...|.+++|+|++++|++|+.||.|++||++++
T Consensus       275 d~~i~iwd~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~  340 (388)
T d1erja_         275 DRSVKLWNLQNANNKSDSK--------------TPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG  340 (388)
T ss_dssp             TSEEEEEEC-----------------------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC
T ss_pred             CCcEEEEeccCCccccccc--------------cccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence            9999999997664322110              01112345667789999999999999999999999999999999999


Q ss_pred             eEEEEeecCCCCCeE--------------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         304 TILQSLTGHDEEPHI--------------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       304 ~~~~~~~~h~~~v~~--------------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      +++.++.+|.+.|.+              +++|++     .||+|+||  |+
T Consensus       341 ~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s-----~Dg~I~iW--~~  385 (388)
T d1erja_         341 NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGS-----GDCKARIW--KY  385 (388)
T ss_dssp             CEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEE-----TTSEEEEE--EE
T ss_pred             cEEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEe-----CCCEEEEE--ee
Confidence            999999999999876              466777     99999999  76

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.5e-21  Score=171.41  Aligned_cols=180  Identities=12%  Similarity=0.143  Sum_probs=150.0

Q ss_pred             eeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec
Q psy8430         134 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP  213 (361)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~  213 (361)
                      .+..+..+..|.......+....+.+|...|.+++|+|++.++++++.|+.|++|++.+++......+|...|.+++|++
T Consensus       114 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~  193 (337)
T d1gxra_         114 VGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISN  193 (337)
T ss_dssp             EEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred             Eeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            34445566677777777788889999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC
Q psy8430         214 NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR  293 (361)
Q Consensus       214 ~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~  293 (361)
                      ++..+++++.|+.+++||++++.                          .+. ...|...|.+++|+|+++++++++.|+
T Consensus       194 ~~~~~~~~~~d~~v~i~d~~~~~--------------------------~~~-~~~~~~~i~~l~~~~~~~~l~~~~~d~  246 (337)
T d1gxra_         194 DGTKLWTGGLDNTVRSWDLREGR--------------------------QLQ-QHDFTSQIFSLGYCPTGEWLAVGMESS  246 (337)
T ss_dssp             TSSEEEEEETTSEEEEEETTTTE--------------------------EEE-EEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred             cccccccccccccccccccccce--------------------------eec-ccccccceEEEEEcccccccceecccc
Confidence            99999999999999999997652                          222 335788999999999999999999999


Q ss_pred             cEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCC
Q psy8430         294 VANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGT  343 (361)
Q Consensus       294 ~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~  343 (361)
                      .+++||++++... ....|...|.++.++..+.   ..+.||.|++|  |..+
T Consensus       247 ~i~i~d~~~~~~~-~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iw--d~~~  296 (337)
T d1gxra_         247 NVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAW--RTPY  296 (337)
T ss_dssp             CEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEE--ETTT
T ss_pred             ccccccccccccc-cccccccccceEEECCCCCEEEEEeCCCeEEEE--ECCC
Confidence            9999999988775 4556888888854444311   12399999999  7733

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=1.9e-22  Score=176.65  Aligned_cols=178  Identities=20%  Similarity=0.329  Sum_probs=136.1

Q ss_pred             eEEeeccCCCe-EEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430         154 IRSFSGHRDGV-WDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       154 ~~~l~~h~~~V-~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~  232 (361)
                      ..+|+||...| +|++|  ++++|++|+.||+|++||+.+++++.++.+|.+.|.+++|+|+ ..|++|+.|++|++|++
T Consensus         5 ~~tL~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~~   81 (355)
T d1nexb2           5 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDI   81 (355)
T ss_dssp             EEEEECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETT-TEEEEEETTCCEEEEET
T ss_pred             cEEECCcCCCcEEEEEE--CCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCC-CEEEEEecccccccccc
Confidence            45789999886 56655  5789999999999999999999999999999999999999985 68999999999999998


Q ss_pred             cccccccCCCCCCCC-----------------------------CC-----------------CCCCC------------
Q psy8430         233 VINWECLNNDNDSDL-----------------------------DE-----------------SKEPD------------  254 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~-----------------------------~~-----------------~~~~~------------  254 (361)
                      ...............                             ..                 .....            
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (355)
T d1nexb2          82 KKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM  161 (355)
T ss_dssp             TTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCS
T ss_pred             cccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeecc
Confidence            766432211100000                             00                 00000            


Q ss_pred             ---------CC------------c--eecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430         255 ---------ES------------S--ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG  311 (361)
Q Consensus       255 ---------~~------------~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~  311 (361)
                               ..            .  ...........++...+.++.|+|++.++++++.|+.|++||++++.++..+.+
T Consensus       162 ~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~  241 (355)
T d1nexb2         162 ASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQG  241 (355)
T ss_dssp             SCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred             ccccccccccceeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeecccccccccccc
Confidence                     00            0  001122334456777889999999999999999999999999999999999999


Q ss_pred             CCCCCeE------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         312 HDEEPHI------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       312 h~~~v~~------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      |...|.+      ++++++     .||.|++|  |+
T Consensus       242 h~~~v~~~~~~~~~l~~~~-----~dg~i~iw--d~  270 (355)
T d1nexb2         242 HTALVGLLRLSDKFLVSAA-----ADGSIRGW--DA  270 (355)
T ss_dssp             CSSCCCEEEECSSEEEEEC-----TTSEEEEE--ET
T ss_pred             ccccccccccccceeeeee-----cccccccc--cc
Confidence            9999988      455666     99999999  77

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.7e-22  Score=176.01  Aligned_cols=180  Identities=28%  Similarity=0.401  Sum_probs=135.6

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEE
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI  229 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~l  229 (361)
                      ..++.+.|+||.+.|.+ +++++|++|+|||.||+|++||+.+++++.++.+|.+.|.+++|+|+  +|++++.|+.+++
T Consensus         5 ~~~~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~~   81 (342)
T d2ovrb2           5 ELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKV   81 (342)
T ss_dssp             CCCCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--EEEEEETTSCEEE
T ss_pred             CCCcCEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCC--ccccceecccccc
Confidence            44667889999999865 36667899999999999999999999999999999999999999864  9999999999999


Q ss_pred             EeccccccccCCCCCCCCCC----------------------CC----------------------------CCCCC---
Q psy8430         230 WQAVINWECLNNDNDSDLDE----------------------SK----------------------------EPDES---  256 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~----------------------~~----------------------------~~~~~---  256 (361)
                      |+..................                      ..                            ..+..   
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~  161 (342)
T d2ovrb2          82 WNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKV  161 (342)
T ss_dssp             EETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEE
T ss_pred             cccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEEE
Confidence            99876543222111000000                      00                            00000   


Q ss_pred             -ceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE------EEEEcCCCccc
Q psy8430         257 -SITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI------LCVSSYYSKVS  329 (361)
Q Consensus       257 -~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~------~~~s~s~~~v~  329 (361)
                       ..........+.+|...+..+.+  ++.++++++.||.|++||+++++++..+.+|...+.+      ++++++     
T Consensus       162 ~d~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~s-----  234 (342)
T d2ovrb2         162 WDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGN-----  234 (342)
T ss_dssp             EEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEE-----
T ss_pred             eecccceeeEEEcCcccccccccC--CCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecCCCEEEEEc-----
Confidence             00111234555667766666555  7899999999999999999999999999999988887      556666     


Q ss_pred             CCCeEEEEcCCC
Q psy8430         330 CDLFQRIQHLDC  341 (361)
Q Consensus       330 ~dg~i~iW~~d~  341 (361)
                      .||.|++|  |.
T Consensus       235 ~d~~i~iw--d~  244 (342)
T d2ovrb2         235 ADSTVKIW--DI  244 (342)
T ss_dssp             TTSCEEEE--ET
T ss_pred             CCCEEEEE--ec
Confidence            99999999  66

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=9.1e-23  Score=183.13  Aligned_cols=176  Identities=14%  Similarity=0.096  Sum_probs=133.2

Q ss_pred             ccCCCeEEEEEcCC-----CCEEEEEeCCCcEEEEeCCCCe---------------EEE---EEeCCCCCeEEEEEecCC
Q psy8430         159 GHRDGVWDVAVRPG-----QPVLGSASADRTVRLWSTQTGK---------------CVL---QYSGHSGSVNSVRFLPNK  215 (361)
Q Consensus       159 ~h~~~V~~l~~~~~-----~~~l~s~s~d~~i~~wd~~~~~---------------~~~---~~~~h~~~v~~v~~~~~~  215 (361)
                      .+...++.++|.++     +.++++++.||++++|++....               ...   ....+...+.+++|+|++
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg  196 (393)
T d1sq9a_         117 MKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG  196 (393)
T ss_dssp             GGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS
T ss_pred             cCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCC
Confidence            35677888888775     4589999999999999974210               111   112456678999999987


Q ss_pred             CEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc-
Q psy8430         216 DLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRV-  294 (361)
Q Consensus       216 ~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~-  294 (361)
                       +|++|+.||+|++||+.++..+                    ........+.+|..+|.+++|+|+|++|++|+.|++ 
T Consensus       197 -~lasgs~Dg~i~iwd~~~~~~~--------------------~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~  255 (393)
T d1sq9a_         197 -LIATGFNNGTVQISELSTLRPL--------------------YNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSF  255 (393)
T ss_dssp             -EEEEECTTSEEEEEETTTTEEE--------------------EEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTE
T ss_pred             -EEEEEeCCCcEEEEeecccccc--------------------cccccccccccccceEEEcccccccceeeeecCCCCc
Confidence             8899999999999999876432                    112244566789999999999999999999999975 


Q ss_pred             --EEEeeCCCCeEEEEee-------------cCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeeeecc
Q psy8430         295 --ANLFDVETGTILQSLT-------------GHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQD  356 (361)
Q Consensus       295 --v~iwd~~~~~~~~~~~-------------~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~  356 (361)
                        |++||+++++++.++.             +|.+.|.++.+++...   +.+.|++|+||  |+   +. ++++.+|.|
T Consensus       256 ~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vW--d~---~~-g~~~~~l~g  329 (393)
T d1sq9a_         256 GCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFW--DV---KT-KERITTLNM  329 (393)
T ss_dssp             EEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEE--ET---TT-TEEEEEEEC
T ss_pred             ceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEE--EC---CC-CCEEEEECC
Confidence              8999999999888774             7999998844443311   12399999999  77   44 678999999


Q ss_pred             cccCC
Q psy8430         357 IQSTG  361 (361)
Q Consensus       357 h~~~~  361 (361)
                      |.+.|
T Consensus       330 H~~~v  334 (393)
T d1sq9a_         330 HCDDI  334 (393)
T ss_dssp             CGGGC
T ss_pred             cCCcc
Confidence            98754

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.6e-21  Score=166.02  Aligned_cols=191  Identities=23%  Similarity=0.323  Sum_probs=140.6

Q ss_pred             eeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430         153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       153 ~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~  232 (361)
                      .++...+|...|+|++|  +|++|+||+.||+|++||+.+++++.++.+|.+.|.+++|  ++++|++|+.|+.|++|++
T Consensus         7 ~i~~~~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~   82 (293)
T d1p22a2           7 RIHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDV   82 (293)
T ss_dssp             CEECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEES
T ss_pred             EEeccCCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeec--ccceeeccccccccccccc
Confidence            34555688899998765  6889999999999999999999999999999999999987  5789999999999999999


Q ss_pred             cccccccCCCCCCCCCCCCCCC---------CC--------ceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcE
Q psy8430         233 VINWECLNNDNDSDLDESKEPD---------ES--------SITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVA  295 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~---------~~--------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v  295 (361)
                      ..+...................         ..        ..........+..|...+..+.+.  ...+++++.|+.|
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~s~d~~i  160 (293)
T d1p22a2          83 NTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTI  160 (293)
T ss_dssp             SSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEE
T ss_pred             ccccccccccccccccccccccccceeecccccceeEeeccccccccccccccccccccccceec--ccccccccCCCce
Confidence            8775533322211111000000         00        000111234455677888877774  5678899999999


Q ss_pred             EEeeCCCCeEEEEeecCCCCCeE------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430         296 NLFDVETGTILQSLTGHDEEPHI------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST  360 (361)
Q Consensus       296 ~iwd~~~~~~~~~~~~h~~~v~~------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~  360 (361)
                      ++||+++++++..+.++...+..      .+++++     .||.|++|  |+   +. ...+..+.+|...
T Consensus       161 ~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-----~dg~i~i~--d~---~~-~~~~~~~~~~~~~  220 (293)
T d1p22a2         161 KVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGS-----SDNTIRLW--DI---EC-GACLRVLEGHEEL  220 (293)
T ss_dssp             EEEETTTCCEEEEEECCSSCEEEEEEETTEEEEEE-----TTSCEEEE--ET---TT-CCEEEEECCCSSC
T ss_pred             eeecCCCCcEEEEEcccccccccccCCCCeEEEec-----CCCEEEEE--ec---cc-ceeeeeeccccee
Confidence            99999999999999988887766      556666     99999999  77   33 4556677777653

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=1.6e-22  Score=173.12  Aligned_cols=192  Identities=15%  Similarity=0.106  Sum_probs=138.8

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEE
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI  229 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~l  229 (361)
                      ..+++++|+||.++|++++|+|    |+||+.||+|++||+.++     ..+|...|.+++|+++ ..+++++.|+++++
T Consensus         2 ~~~~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~-----~~~h~~~V~~~~~~~~-~~~~s~s~D~~v~~   71 (287)
T d1pgua2           2 HDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSM-----HQDHSNLIVSLDNSKA-QEYSSISWDDTLKV   71 (287)
T ss_dssp             EEEEEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEE-----ECCCCSCEEEEECCST-TCCEEEETTTEEEE
T ss_pred             CcceeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCCC-----CCCCCCCEEEEEecCC-CeEEEEeecccccc
Confidence            4578999999999999999987    999999999999998753     3579999999999865 56789999999999


Q ss_pred             EeccccccccC-----CCC---------CCCCCC-------------CC----------------CCCCCc---eeccc-
Q psy8430         230 WQAVINWECLN-----NDN---------DSDLDE-------------SK----------------EPDESS---ITLRT-  262 (361)
Q Consensus       230 wd~~~~~~~~~-----~~~---------~~~~~~-------------~~----------------~~~~~~---~~~~~-  262 (361)
                      |++........     ...         ......             ..                ......   +.... 
T Consensus        72 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~  151 (287)
T d1pgua2          72 NGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDL  151 (287)
T ss_dssp             TTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEE
T ss_pred             ccccccccccceeeeeeccCCceEEEeecccceeeeccceeeeeeccccceeeeeeccCcceeeeccccceeeeeecccc
Confidence            98765421100     000         000000             00                000000   00000 


Q ss_pred             -ccEEE-eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEE-EeecCCCCCeEE------------------EE
Q psy8430         263 -PVKEL-LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ-SLTGHDEEPHIL------------------CV  321 (361)
Q Consensus       263 -~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~-~~~~h~~~v~~~------------------~~  321 (361)
                       ....+ ..|...+++++|+|++.+|++|+.||.|++||+.++.... .+.+|...|.++                  ++
T Consensus       152 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~  231 (287)
T d1pgua2         152 EVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVA  231 (287)
T ss_dssp             EEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEE
T ss_pred             ceeeeeeeccCCceeEEEeccCccccccccccccccceeecccccccccccccccccceeeecccccccccccCCCCeeE
Confidence             11111 2367789999999999999999999999999999988765 467788887773                  55


Q ss_pred             EcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430         322 SSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG  361 (361)
Q Consensus       322 s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~  361 (361)
                      +++     .|+.|+||  |+   +.+..++..+.||.+.|
T Consensus       232 sgs-----~D~~i~iw--~~---~~~~~~~~~~~~h~~~V  261 (287)
T d1pgua2         232 TGS-----LDTNIFIY--SV---KRPMKIIKALNAHKDGV  261 (287)
T ss_dssp             EEE-----TTSCEEEE--ES---SCTTCCEEETTSSTTCE
T ss_pred             eec-----CCCeEEEE--EC---CCCCeEEEEeCCCCCCe
Confidence            666     99999999  87   55566788889998754

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.87  E-value=1.8e-21  Score=167.41  Aligned_cols=152  Identities=15%  Similarity=0.160  Sum_probs=122.9

Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE-EEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccc
Q psy8430         160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL-QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC  238 (361)
Q Consensus       160 h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~  238 (361)
                      ....+.+++|+|++.+|++|+.|+.|++||+.+++... ....|...|.+++|+|++.++++++.|+.|++||+.++...
T Consensus       135 ~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~  214 (299)
T d1nr0a2         135 ISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFEL  214 (299)
T ss_dssp             CSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            34568899999999999999999999999998876543 33468999999999999999999999999999998765332


Q ss_pred             cCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEE--EeecCC-CC
Q psy8430         239 LNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ--SLTGHD-EE  315 (361)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~--~~~~h~-~~  315 (361)
                                             .....+.+|...|++++|+|++++|++|+.||.|++||++++....  ....|. ..
T Consensus       215 -----------------------~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~  271 (299)
T d1nr0a2         215 -----------------------AHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSS  271 (299)
T ss_dssp             -----------------------SCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSC
T ss_pred             -----------------------cccccccccccccccccccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCc
Confidence                                   1234456799999999999999999999999999999998765433  233343 34


Q ss_pred             CeE-------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430         316 PHI-------LCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       316 v~~-------~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      +.+       .+++++     .||.|+||  |+
T Consensus       272 v~~~~~~~~~~l~s~s-----~D~~i~iW--dl  297 (299)
T d1nr0a2         272 VNSVIWLNETTIVSAG-----QDSNIKFW--NV  297 (299)
T ss_dssp             EEEEEEEETTEEEEEE-----TTSCEEEE--EC
T ss_pred             EEEEEECCCCEEEEEe-----CCCEEEEE--ec
Confidence            444       556666     99999999  65

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.3e-19  Score=157.39  Aligned_cols=171  Identities=23%  Similarity=0.454  Sum_probs=120.4

Q ss_pred             eeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEE--------------
Q psy8430         133 LKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ--------------  198 (361)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~--------------  198 (361)
                      +.+..+..+..|..  .++++++++.+|.+.|++++|+|+  +|++|+.|+++++|+.........              
T Consensus        31 ~sgs~Dg~i~vWd~--~~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (342)
T d2ovrb2          31 VSGSDDNTLKVWSA--VTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH  106 (342)
T ss_dssp             EEEETTSCEEEEET--TTCCEEEECCCCSSCEEEEEEETT--EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE
T ss_pred             EEEeCCCeEEEEEC--CCCCEEEEEeCCCCCEEEEEeCCC--ccccceecccccccccccccceecccccceeEeeeecc
Confidence            34455556666654  466789999999999999999975  999999999999998764322211              


Q ss_pred             ------------------------------------------------------------------EeCCCCCeEEEEEe
Q psy8430         199 ------------------------------------------------------------------YSGHSGSVNSVRFL  212 (361)
Q Consensus       199 ------------------------------------------------------------------~~~h~~~v~~v~~~  212 (361)
                                                                                        +.+|...+.  .+.
T Consensus       107 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~--~~~  184 (342)
T d2ovrb2         107 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY--SLQ  184 (342)
T ss_dssp             TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEE--EEE
T ss_pred             cccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEEEeecccceeeEEEcCcccccc--ccc
Confidence                                                                              112222222  222


Q ss_pred             cCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy8430         213 PNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD  292 (361)
Q Consensus       213 ~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d  292 (361)
                      +++..+++++.||.|++||++.+                          .++..+.+|...+.+++++  ++++++++.|
T Consensus       185 ~~~~~l~s~~~dg~i~~~d~~~~--------------------------~~~~~~~~~~~~v~~~~~~--~~~l~s~s~d  236 (342)
T d2ovrb2         185 FDGIHVVSGSLDTSIRVWDVETG--------------------------NCIHTLTGHQSLTSGMELK--DNILVSGNAD  236 (342)
T ss_dssp             ECSSEEEEEETTSCEEEEETTTC--------------------------CEEEEECCCCSCEEEEEEE--TTEEEEEETT
T ss_pred             CCCCEEEEEeCCCeEEEeecccc--------------------------eeeeEecccccceeEEecC--CCEEEEEcCC
Confidence            34455555555555555555433                          3567788899999988885  5699999999


Q ss_pred             CcEEEeeCCCCeEEEEeecC---CCCCeE------EEEEcCCCcccCCCeEEEEcCCCCCC
Q psy8430         293 RVANLFDVETGTILQSLTGH---DEEPHI------LCVSSYYSKVSCDLFQRIQHLDCGTS  344 (361)
Q Consensus       293 ~~v~iwd~~~~~~~~~~~~h---~~~v~~------~~~s~s~~~v~~dg~i~iW~~d~~~~  344 (361)
                      +.|++||+.+.+....+..+   ...+.+      ++++++     .||.|+||  |+.++
T Consensus       237 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s-----~Dg~i~iw--d~~tg  290 (342)
T d2ovrb2         237 STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSS-----DDGTVKLW--DLKTG  290 (342)
T ss_dssp             SCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEE-----TTSEEEEE--ETTTC
T ss_pred             CEEEEEecccccccccccccceeeeceeecccCCCeeEEEc-----CCCEEEEE--ECCCC
Confidence            99999999999888887654   344444      566677     99999999  77443

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.5e-19  Score=152.11  Aligned_cols=215  Identities=20%  Similarity=0.262  Sum_probs=141.3

Q ss_pred             eeeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEE
Q psy8430         132 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF  211 (361)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~  211 (361)
                      ...+..+..+..|..  .++++++++.+|.+.|++++|  ++++|++|+.|++|++|++..+........+.....  .+
T Consensus        28 l~sgs~Dg~i~vWd~--~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~~--~~  101 (293)
T d1p22a2          28 IVSGLRDNTIKIWDK--NTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVL--HL  101 (293)
T ss_dssp             EEEEESSSCEEEEES--SSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEE--EE
T ss_pred             EEEEeCCCeEEEEEC--CCCcEEEEEecCCCCEeeeec--ccceeecccccccccccccccccccccccccccccc--cc
Confidence            445666667777755  457788999999999999987  467999999999999999987765544432222222  23


Q ss_pred             ecCCCEEEEEECCCcEEEEeccccccccCCC----CCCCCCC---------CCCCCCC--c--eecccccEEEeCCCCcE
Q psy8430         212 LPNKDLVLSASGDKSVHIWQAVINWECLNND----NDSDLDE---------SKEPDES--S--ITLRTPVKELLGHSNVV  274 (361)
Q Consensus       212 ~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~----~~~~~~~---------~~~~~~~--~--~~~~~~~~~~~~~~~~v  274 (361)
                      .+....++++..++.+.+|+...........    .......         ....+..  .  .....++..+.++...+
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~v  181 (293)
T d1p22a2         102 RFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI  181 (293)
T ss_dssp             ECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred             cccccceeecccccceeEeeccccccccccccccccccccccceecccccccccCCCceeeecCCCCcEEEEEccccccc
Confidence            3334455555555555555544332211100    0000000         0000000  0  00113566778888888


Q ss_pred             EEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE------EEEEcCCCcccCCCeEEEEcCCCCCCCC--
Q psy8430         275 IAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI------LCVSSYYSKVSCDLFQRIQHLDCGTSEN--  346 (361)
Q Consensus       275 ~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~------~~~s~s~~~v~~dg~i~iW~~d~~~~~~--  346 (361)
                      ..+.++  +.++++++.|+.|++||++++..+..+.+|...+..      ++++++     .||.|++|  |+.+...  
T Consensus       182 ~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~-----~dg~i~iw--d~~~~~~~~  252 (293)
T d1p22a2         182 ACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGA-----YDGKIKVW--DLVAALDPR  252 (293)
T ss_dssp             EEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSSEEEEEE-----TTSCEEEE--EHHHHTSTT
T ss_pred             ccccCC--CCeEEEecCCCEEEEEecccceeeeeecccceeeeeccccceEEEEEc-----CCCEEEEE--ECCCCcccc
Confidence            888774  678999999999999999999999999998888776      677888     99999999  6533221  


Q ss_pred             ---cceeeeeecccccCC
Q psy8430         347 ---PIHSVCVFQDIQSTG  361 (361)
Q Consensus       347 ---~~~~v~~~~~h~~~~  361 (361)
                         ...++..+.+|++.|
T Consensus       253 ~~~~~~~~~~~~~H~~~V  270 (293)
T d1p22a2         253 APAGTLCLRTLVEHSGRV  270 (293)
T ss_dssp             SCTTTTEEEEECCCSSCC
T ss_pred             ccCCceeeEEecCCCCCE
Confidence               235788899998865

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.83  E-value=3.4e-20  Score=162.09  Aligned_cols=162  Identities=19%  Similarity=0.300  Sum_probs=130.7

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEE
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  228 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~  228 (361)
                      .+++.+..+.++...+.++.|+|++..+++++.|++|++||+.++..+..+.+|...|.+++|+  +++|++++.||.|+
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~--~~~l~~~~~dg~i~  266 (355)
T d1nexb2         189 AQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIR  266 (355)
T ss_dssp             TTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEEC--SSEEEEECTTSEEE
T ss_pred             ccccceeeeeccccccccccccccceeeecccccceEEeeeccccccccccccccccccccccc--cceeeeeecccccc
Confidence            4567778888999999999999999999999999999999999999999999999999999986  56999999999999


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEE-EEcCCCCEEEEEeCCCcEEEeeCCCCeEEE
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAA-DWLSDGEQVITASWDRVANLFDVETGTILQ  307 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~  307 (361)
                      +||+++.                            ...+..|...+.++ .+++++.++++| .|+.|++||+++|+++.
T Consensus       267 iwd~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~l~~g-~d~~i~vwd~~tg~~~~  317 (355)
T d1nexb2         267 GWDANDY----------------------------SRKFSYHHTNLSAITTFYVSDNILVSG-SENQFNIYNLRSGKLVH  317 (355)
T ss_dssp             EEETTTC----------------------------CEEEEEECTTCCCCCEEEECSSEEEEE-ETTEEEEEETTTCCBCC
T ss_pred             ccccccc----------------------------ceecccccCCceEEEEEcCCCCEEEEE-eCCEEEEEECCCCCEEE
Confidence            9998754                            23444566655555 456677766665 58999999999999886


Q ss_pred             -EeecCCCCCeEEEEEcCCC--cccCCCeEEEEcCCC
Q psy8430         308 -SLTGHDEEPHILCVSSYYS--KVSCDLFQRIQHLDC  341 (361)
Q Consensus       308 -~~~~h~~~v~~~~~s~s~~--~v~~dg~i~iW~~d~  341 (361)
                       .+.+|.+.|.++.+++...  +.+.||.++||.+|+
T Consensus       318 ~~~~~~~~~V~~v~~~~~~~~~~~s~dg~~~l~~~df  354 (355)
T d1nexb2         318 ANILKDADQIWSVNFKGKTLVAAVEKDGQSFLEILDF  354 (355)
T ss_dssp             SCTTTTCSEEEEEEEETTEEEEEEESSSCEEEEEEEC
T ss_pred             EEecCCCCCEEEEEEcCCeEEEEEECCCcEEEEEEeC
Confidence             4677888888855554411  234899988885564

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.82  E-value=5.6e-20  Score=159.48  Aligned_cols=160  Identities=13%  Similarity=0.111  Sum_probs=117.9

Q ss_pred             eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE---EEEEeCCCCCeEEEEEecCC-CEEEEEECCCcE
Q psy8430         152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC---VLQYSGHSGSVNSVRFLPNK-DLVLSASGDKSV  227 (361)
Q Consensus       152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~---~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~i  227 (361)
                      +++..+++|...|++|+|+|++++|++||.||+|++||+..+..   +....+|..+|.+++|+|++ .+|++|+.||.|
T Consensus         2 ~~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v   81 (342)
T d1yfqa_           2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEI   81 (342)
T ss_dssp             EEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCE
T ss_pred             CeEEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccce
Confidence            45677789999999999999999999999999999999976532   23334699999999999864 579999999999


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe-CCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEE
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  306 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~  306 (361)
                      ++|++.....                          ..... .+........+.+++..+++++.|+.+++||++++...
T Consensus        82 ~~w~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~  135 (342)
T d1yfqa_          82 LKVDLIGSPS--------------------------FQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDG  135 (342)
T ss_dssp             EEECSSSSSS--------------------------EEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTB
T ss_pred             eeeecccccc--------------------------cccccccccccccccccccccccccccccccccceeeccccccc
Confidence            9999875521                          22222 23334455566778899999999999999998754332


Q ss_pred             ----EEeecCCCCCe--E--------EEEEcCCCcccCCCeEEEEcCCCCCC
Q psy8430         307 ----QSLTGHDEEPH--I--------LCVSSYYSKVSCDLFQRIQHLDCGTS  344 (361)
Q Consensus       307 ----~~~~~h~~~v~--~--------~~~s~s~~~v~~dg~i~iW~~d~~~~  344 (361)
                          .....+.....  .        .+++++     .||.|++|  |+.+.
T Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~i~~~--~~~~~  180 (342)
T d1yfqa_         136 VIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGM-----NNSQVQWF--RLPLC  180 (342)
T ss_dssp             CEEEEESCSSSSSSCCCEEEEEECSSEEEEEE-----STTEEEEE--ESSCC
T ss_pred             eeeecccccccccceeeeeeeeccCCceeeec-----CCCcEEEE--ecccC
Confidence                22222222111  1        566667     99999999  66443

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.81  E-value=7.7e-19  Score=149.87  Aligned_cols=161  Identities=12%  Similarity=0.112  Sum_probs=123.7

Q ss_pred             cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCC-cEEEEeCCCCeEEEEEe-CCCCCeEEEEEecCCCEEEEEECCCc
Q psy8430         149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADR-TVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNKDLVLSASGDKS  226 (361)
Q Consensus       149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~-~i~~wd~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d~~  226 (361)
                      ..++.+..+..+ ..+  .++++++..++.++.|+ .+++|++........+. .|...|.+++|+|++.+|++|+.||.
T Consensus       109 ~~~~~~~~~~~~-~~~--~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~  185 (287)
T d1pgua2         109 FTGDIIKSVRLN-SPG--SAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGK  185 (287)
T ss_dssp             TTCCEEEEEECS-SCE--EEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred             cceeeeeecccc-cee--eeeeccCcceeeeccccceeeeeeccccceeeeeeeccCCceeEEEeccCcccccccccccc
Confidence            334455555543 333  45667788888888775 79999997666555544 47789999999999999999999999


Q ss_pred             EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC----------CCEEEEEeCCCcEE
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD----------GEQVITASWDRVAN  296 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----------~~~l~s~~~d~~v~  296 (361)
                      |++||+.++..                         ....+.+|...|.+++|+|.          +.++++|+.|+.|+
T Consensus       186 i~i~d~~~~~~-------------------------~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~  240 (287)
T d1pgua2         186 ILLYDLQSREV-------------------------KTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIF  240 (287)
T ss_dssp             EEEEETTTTEE-------------------------EECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEE
T ss_pred             ccceeeccccc-------------------------ccccccccccccceeeecccccccccccCCCCeeEeecCCCeEE
Confidence            99999876521                         12234578999999999874          46899999999999


Q ss_pred             EeeCCC-CeEEEEeecCCCCCeEEEEEcC--CCcccCCCeEEEE
Q psy8430         297 LFDVET-GTILQSLTGHDEEPHILCVSSY--YSKVSCDLFQRIQ  337 (361)
Q Consensus       297 iwd~~~-~~~~~~~~~h~~~v~~~~~s~s--~~~v~~dg~i~iW  337 (361)
                      +||+++ ++.+..+.+|...|.++.++..  +++.+.||.|++|
T Consensus       241 iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~~l~s~g~D~~v~iW  284 (287)
T d1pgua2         241 IYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGADACIKRW  284 (287)
T ss_dssp             EEESSCTTCCEEETTSSTTCEEEEEEEETTEEEEEETTSCEEEE
T ss_pred             EEECCCCCeEEEEeCCCCCCeEEEEECCCCEEEEEECCCeEEEE
Confidence            999976 5677788899999999655544  2234599999999

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.72  E-value=1.9e-16  Score=136.77  Aligned_cols=201  Identities=7%  Similarity=-0.002  Sum_probs=119.3

Q ss_pred             eeeccceeEEeeecCccce-eeeEEeeccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCeEEEEEeCCCC-CeEEE
Q psy8430         133 LKVQTSKIVSSFKTSLLSC-YKIRSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQTGKCVLQYSGHSG-SVNSV  209 (361)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~-~~~~~l~~h~~~V~~l~~~~~~-~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~-~v~~v  209 (361)
                      +.+..+..+.+|....... ..+....+|.++|++++|+|++ .+|++|+.|++|++|++..+........+.. .....
T Consensus        27 ~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~  106 (342)
T d1yfqa_          27 LITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICR  106 (342)
T ss_dssp             EEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEE
T ss_pred             EEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeeccccccccccccccccccccc
Confidence            3445566677776543322 2333444799999999999864 5899999999999999987755544443332 22333


Q ss_pred             EEecCCCEEEEEECCCcEEEEecccccccc------------------------------------------------CC
Q psy8430         210 RFLPNKDLVLSASGDKSVHIWQAVINWECL------------------------------------------------NN  241 (361)
Q Consensus       210 ~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~------------------------------------------------~~  241 (361)
                      .+.++...+++++.|+.+++||++......                                                ..
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~  186 (342)
T d1yfqa_         107 ICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGT  186 (342)
T ss_dssp             EEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCE
T ss_pred             ccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCceeeecCCCcEEEEecccCccccee
Confidence            344455556666666666666554332111                                                00


Q ss_pred             CCCCCCCC-----CCCC-CCCc-----------------------------eecccccEEEeCCCCcEEEEEEcCCCCEE
Q psy8430         242 DNDSDLDE-----SKEP-DESS-----------------------------ITLRTPVKELLGHSNVVIAADWLSDGEQV  286 (361)
Q Consensus       242 ~~~~~~~~-----~~~~-~~~~-----------------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  286 (361)
                      ........     ...+ ....                             ...........+|...+.+++|+|++.+|
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l  266 (342)
T d1yfqa_         187 IEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFL  266 (342)
T ss_dssp             EEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCE
T ss_pred             eeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCccEE
Confidence            00000000     0000 0000                             00000001112456678999999999999


Q ss_pred             EEEeCCCcEEEeeCCCCeEEEEeec-CCCCCeE------EEEEcCCCcccCCCeEEEEc
Q psy8430         287 ITASWDRVANLFDVETGTILQSLTG-HDEEPHI------LCVSSYYSKVSCDLFQRIQH  338 (361)
Q Consensus       287 ~s~~~d~~v~iwd~~~~~~~~~~~~-h~~~v~~------~~~s~s~~~v~~dg~i~iW~  338 (361)
                      ++|+.||.|++||+++++.+.++.. |...+.+      ++++++     .|+.+++|.
T Consensus       267 asg~~Dg~v~vWD~~~~~~l~~~~~~~~~~~~~~s~~~~~l~~a~-----sdd~~~~~~  320 (342)
T d1yfqa_         267 YTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLAT-----SDDTFKTNA  320 (342)
T ss_dssp             EEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEEECSSEEEEEE-----ECTHHHHCS
T ss_pred             EEECCCCEEEEEECCCCcEEEEecCCCCCEEEEEEeCCCEEEEEE-----cCCcEEEee
Confidence            9999999999999999999998864 4444444      334444     788888883

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.71  E-value=1.7e-16  Score=139.00  Aligned_cols=145  Identities=10%  Similarity=-0.009  Sum_probs=120.3

Q ss_pred             EEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCC--cEEEEeccccccccCCC
Q psy8430         166 DVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK--SVHIWQAVINWECLNND  242 (361)
Q Consensus       166 ~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~--~i~lwd~~~~~~~~~~~  242 (361)
                      .-.||| ||+++++++. |.|++||+..+..+..  +|...|.+++|+|+|+.|++++.+.  .|++||+.++       
T Consensus         7 ~~~fSP~dG~~~a~~~~-g~v~v~d~~~~~~~~~--~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~-------   76 (360)
T d1k32a3           7 AEDFSPLDGDLIAFVSR-GQAFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTG-------   76 (360)
T ss_dssp             EEEEEECGGGCEEEEET-TEEEEECTTSSBEEEC--SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTC-------
T ss_pred             cccccCCCCCEEEEEEC-CeEEEEECCCCcEEEc--cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCC-------
Confidence            356999 9999998874 7999999988876553  6999999999999999988776553  7999999766       


Q ss_pred             CCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEE
Q psy8430         243 NDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS  322 (361)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s  322 (361)
                                          ....+..|...+.+++|+|+|++|++++.++.+++|++.++++...+..|...+.++.++
T Consensus        77 --------------------~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  136 (360)
T d1k32a3          77 --------------------KAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTIS  136 (360)
T ss_dssp             --------------------CEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEEC
T ss_pred             --------------------cEEEeeCCCceEEeeeecccccccceeccccccccccccccceeeeeecccccccchhhc
Confidence                                456677899999999999999999999999999999999999999999888888775555


Q ss_pred             cCCC-------------cccCCCeEEEEcCCCC
Q psy8430         323 SYYS-------------KVSCDLFQRIQHLDCG  342 (361)
Q Consensus       323 ~s~~-------------~v~~dg~i~iW~~d~~  342 (361)
                      +++.             ....++.+++|  |..
T Consensus       137 pdg~~la~~~~~~~~~~~~~~~~~~~v~--d~~  167 (360)
T d1k32a3         137 DNSRFIAYGFPLKHGETDGYVMQAIHVY--DME  167 (360)
T ss_dssp             TTSCEEEEEEEECSSTTCSCCEEEEEEE--ETT
T ss_pred             cceeeeeeeccccccceeeccccceeee--ccc
Confidence            4421             12357789999  663

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.71  E-value=4.2e-17  Score=147.40  Aligned_cols=101  Identities=7%  Similarity=-0.115  Sum_probs=77.7

Q ss_pred             eeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEE--Ee---CCCCCeE
Q psy8430         133 LKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ--YS---GHSGSVN  207 (361)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~--~~---~h~~~v~  207 (361)
                      .....+..+..|.  ..+++.+.++..|. .+..++|+|||++|++++.|++|++||+.+++....  +.   +|.+.+.
T Consensus        36 V~~~~dg~v~vwD--~~t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~  112 (426)
T d1hzua2          36 VTLRDAGQIALVD--GDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVES  112 (426)
T ss_dssp             EEETTTTEEEEEE--TTTCSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEE
T ss_pred             EEEcCCCEEEEEE--CCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEE
Confidence            3344455555554  45678888998875 589999999999999999999999999998864433  32   4666777


Q ss_pred             EEEEecCCCEEEE-EECCCcEEEEeccccc
Q psy8430         208 SVRFLPNKDLVLS-ASGDKSVHIWQAVINW  236 (361)
Q Consensus       208 ~v~~~~~~~~l~s-~~~d~~i~lwd~~~~~  236 (361)
                      +++|+|+|+++++ +..++.+.+||..++.
T Consensus       113 s~~~spDG~~l~v~~~~~~~v~i~d~~~~~  142 (426)
T d1hzua2         113 SKFKGYEDRYTIAGAYWPPQFAIMDGETLE  142 (426)
T ss_dssp             CCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred             eeeecCCCCEEEEeecCCCeEEEEcCCccc
Confidence            8888899998654 5578999999987653

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.70  E-value=1.7e-16  Score=139.01  Aligned_cols=162  Identities=10%  Similarity=0.069  Sum_probs=125.1

Q ss_pred             ccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCC--cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCC
Q psy8430         148 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADR--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK  225 (361)
Q Consensus       148 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~--~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~  225 (361)
                      ...+..++ + +|.+.|.+++|+|||+.|++++.+.  .|++||..+++.. .+..|...|.+++|+|++++|++++.++
T Consensus        31 ~~~~~~~~-~-~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~~~~  107 (360)
T d1k32a3          31 VSGTYVLK-V-PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRF  107 (360)
T ss_dssp             TTSSBEEE-C-SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTS
T ss_pred             CCCCcEEE-c-cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEE-EeeCCCceEEeeeecccccccceecccc
Confidence            33444443 3 7999999999999999988776653  7999999887754 5667999999999999999999999999


Q ss_pred             cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe----------CCCcE
Q psy8430         226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS----------WDRVA  295 (361)
Q Consensus       226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~----------~d~~v  295 (361)
                      .+.+|++.++                          .....+..|...+.+++|+|+|++|+.++          .++.+
T Consensus       108 ~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~  161 (360)
T d1k32a3         108 EIMTVDLETG--------------------------KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAI  161 (360)
T ss_dssp             EEEEEETTTC--------------------------CEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEE
T ss_pred             cccccccccc--------------------------ceeeeeecccccccchhhccceeeeeeeccccccceeeccccce
Confidence            9999998765                          24556778888999999999999998654          34568


Q ss_pred             EEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCC
Q psy8430         296 NLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDC  341 (361)
Q Consensus       296 ~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~  341 (361)
                      ++||+.+++..... .|...+....+++.+.   +.+.|+.+++|  |.
T Consensus       162 ~v~d~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~s~~~~~~~~--d~  207 (360)
T d1k32a3         162 HVYDMEGRKIFAAT-TENSHDYAPAFDADSKNLYYLSYRSLDPSP--DR  207 (360)
T ss_dssp             EEEETTTTEEEECS-CSSSBEEEEEECTTSCEEEEEESCCCCCEE--CS
T ss_pred             eeeccccCceeeec-ccccccccccccCCCCEEEEEeCCCceEcc--cc
Confidence            99999988765543 3555555544444421   22389999999  65

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.61  E-value=1.3e-15  Score=137.72  Aligned_cols=150  Identities=11%  Similarity=-0.041  Sum_probs=110.7

Q ss_pred             cCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCC
Q psy8430         170 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDE  249 (361)
Q Consensus       170 ~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~  249 (361)
                      +++.-++++.+.||+|.+||..+++.+..+..+ ..+..++|+|||+++++++.|+++.+||+.++...           
T Consensus        29 ~~~~~~~v~~~d~g~v~v~D~~t~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~-----------   96 (432)
T d1qksa2          29 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT-----------   96 (432)
T ss_dssp             CGGGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC-----------
T ss_pred             CCCcEEEEEEcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCce-----------
Confidence            333335688999999999999999999999865 57999999999999999999999999998765321           


Q ss_pred             CCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEE-EEEeCCCcEEEeeCCCCeEEEEeecCCCCCe-----------
Q psy8430         250 SKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV-ITASWDRVANLFDVETGTILQSLTGHDEEPH-----------  317 (361)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~-----------  317 (361)
                                ....+....+|.+.+.+..|+|||+++ +++..++.|++||..+++++..+..|...+.           
T Consensus        97 ----------~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (432)
T d1qksa2          97 ----------TVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVA  166 (432)
T ss_dssp             ----------EEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEE
T ss_pred             ----------EEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCcee
Confidence                      001122223466677778889999986 6788899999999999999988876543322           


Q ss_pred             EEEEEcCCC----cccCCCeEEEEcCCCCC
Q psy8430         318 ILCVSSYYS----KVSCDLFQRIQHLDCGT  343 (361)
Q Consensus       318 ~~~~s~s~~----~v~~dg~i~iW~~d~~~  343 (361)
                      .++++....    .+..++.|.+|  |..+
T Consensus       167 ~v~~s~dg~~~~vs~~~~~~i~~~--d~~~  194 (432)
T d1qksa2         167 AILASHYRPEFIVNVKETGKILLV--DYTD  194 (432)
T ss_dssp             EEEECSSSSEEEEEETTTTEEEEE--ETTC
T ss_pred             EEEECCCCCEEEEEEccCCeEEEE--EccC
Confidence            123333211    12378899999  6633

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.56  E-value=1.3e-14  Score=130.82  Aligned_cols=122  Identities=12%  Similarity=0.005  Sum_probs=97.9

Q ss_pred             CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCC
Q psy8430         173 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKE  252 (361)
Q Consensus       173 ~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      ..++++.+.||+|++||+.+++.+.++..| ..+..++|+|||+++++++.|+++++||+.++...              
T Consensus        32 ~~~~V~~~~dg~v~vwD~~t~~~~~~l~~g-~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~--------------   96 (426)
T d1hzua2          32 NLFSVTLRDAGQIALVDGDSKKIVKVIDTG-YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPT--------------   96 (426)
T ss_dssp             GEEEEEETTTTEEEEEETTTCSEEEEEECC-SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCE--------------
T ss_pred             eEEEEEEcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCcee--------------
Confidence            336688889999999999999999999966 56999999999999999999999999999876321              


Q ss_pred             CCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEE-eCCCcEEEeeCCCCeEEEEeecCCCCC
Q psy8430         253 PDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA-SWDRVANLFDVETGTILQSLTGHDEEP  316 (361)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~d~~v~iwd~~~~~~~~~~~~h~~~v  316 (361)
                             ....+....+|.+.+.+++|+|||++++++ ..++.+.+||..++.++..+..|...+
T Consensus        97 -------~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~  154 (426)
T d1hzua2          97 -------KVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTV  154 (426)
T ss_dssp             -------EEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECS
T ss_pred             -------EEEEEeCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCc
Confidence                   001122223566778888999999987554 578999999999999998888766544

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.54  E-value=1.9e-13  Score=123.23  Aligned_cols=188  Identities=9%  Similarity=-0.153  Sum_probs=125.0

Q ss_pred             eeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE--EEEEe---CCCCCeEE
Q psy8430         134 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYS---GHSGSVNS  208 (361)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~--~~~~~---~h~~~v~~  208 (361)
                      ....+..+..|.  ..+++.++++..|. .+..++|+|||+++++++.|++|++||+.+++.  ...+.   +|.+.+.+
T Consensus        37 ~~~d~g~v~v~D--~~t~~v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s  113 (432)
T d1qksa2          37 TLRDAGQIALID--GSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETS  113 (432)
T ss_dssp             EETTTTEEEEEE--TTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEEC
T ss_pred             EEcCCCEEEEEE--CCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEe
Confidence            333444444444  46667788888774 699999999999999999999999999988753  33333   45666777


Q ss_pred             EEEecCCCEE-EEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEE-
Q psy8430         209 VRFLPNKDLV-LSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV-  286 (361)
Q Consensus       209 v~~~~~~~~l-~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-  286 (361)
                      ..|+|||+++ ++++.++++++||..++..+.......               .........+.....++.++|+|.++ 
T Consensus       114 ~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~v~~s~dg~~~~  178 (432)
T d1qksa2         114 KMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRG---------------MTYDEQEYHPEPRVAAILASHYRPEFI  178 (432)
T ss_dssp             CSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCE---------------ECTTTCCEESCCCEEEEEECSSSSEEE
T ss_pred             cccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCC---------------ccccceeccCCCceeEEEECCCCCEEE
Confidence            7788899975 678889999999998764321100000               00000011245567788999999876 


Q ss_pred             EEEeCCCcEEEeeCCCCeEEEEeec-CCCCCeEEEEEcCCC--cc--cCCCeEEEEcCCC
Q psy8430         287 ITASWDRVANLFDVETGTILQSLTG-HDEEPHILCVSSYYS--KV--SCDLFQRIQHLDC  341 (361)
Q Consensus       287 ~s~~~d~~v~iwd~~~~~~~~~~~~-h~~~v~~~~~s~s~~--~v--~~dg~i~iW~~d~  341 (361)
                      ++...++.|.+||..+++....... +...+..+.+++++.  ++  ..++.+.+|  |.
T Consensus       179 vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~--d~  236 (432)
T d1qksa2         179 VNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVI--DT  236 (432)
T ss_dssp             EEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEE--ET
T ss_pred             EEEccCCeEEEEEccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEe--ec
Confidence            4566779999999998876654443 334445544554422  11  257788888  65

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.47  E-value=2.2e-12  Score=111.11  Aligned_cols=97  Identities=10%  Similarity=0.026  Sum_probs=71.6

Q ss_pred             ceeEEeeecCccceeeeEEeec--cCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCeEEEEEeCCC-----CCeEEE
Q psy8430         138 SKIVSSFKTSLLSCYKIRSFSG--HRDGVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGHS-----GSVNSV  209 (361)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~l~~--h~~~V~~l~~~~~~~~l-~s~s~d~~i~~wd~~~~~~~~~~~~h~-----~~v~~v  209 (361)
                      +.-+.+|..  .+.+.++++..  +...+.+++|+|||+++ ++++.++.|.+||+.+++.+..+..+.     ..+..+
T Consensus        10 d~~v~v~D~--~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~v   87 (337)
T d1pbyb_          10 PDKLVVIDT--EKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGA   87 (337)
T ss_dssp             TTEEEEEET--TTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCE
T ss_pred             CCEEEEEEC--CCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccccceeeE
Confidence            334444444  34566666654  44668899999999976 566789999999999999988887554     345588


Q ss_pred             EEecCCCEEEEEE------------CCCcEEEEeccccc
Q psy8430         210 RFLPNKDLVLSAS------------GDKSVHIWQAVINW  236 (361)
Q Consensus       210 ~~~~~~~~l~s~~------------~d~~i~lwd~~~~~  236 (361)
                      +|+|+++.+++++            .+..+.+||..++.
T Consensus        88 ~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  126 (337)
T d1pbyb_          88 ALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS  126 (337)
T ss_dssp             EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE
T ss_pred             EEcCCCcEEEEeecCCcceeeeccccccceeeccccCCe
Confidence            9999999988775            45678888877653

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.47  E-value=1.4e-11  Score=104.20  Aligned_cols=142  Identities=11%  Similarity=0.137  Sum_probs=104.4

Q ss_pred             eEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEE
Q psy8430         140 IVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV  218 (361)
Q Consensus       140 ~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l-~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l  218 (361)
                      .+.+|..  .+++.++++... ..+..++|+|||++| ++++.++.|++||+.+++.+..+..+. .+..++|++++..+
T Consensus        13 ~v~v~D~--~t~~~~~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~-~~~~~~~~~~~~~~   88 (301)
T d1l0qa2          13 NISVIDV--TSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQV   88 (301)
T ss_dssp             EEEEEET--TTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEE
T ss_pred             EEEEEEC--CCCeEEEEEECC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeeccc-cccccccccccccc
Confidence            3444443  445667777654 457899999999977 566788999999999999999988654 57899999999875


Q ss_pred             EE-EECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEE-EeCCCcEE
Q psy8430         219 LS-ASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT-ASWDRVAN  296 (361)
Q Consensus       219 ~s-~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~~~d~~v~  296 (361)
                      +. +..++.+.+|+..++.                          ....+. +......+.|+|+|..++. +..++.+.
T Consensus        89 ~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~-~~~~~~~~~~~~dg~~~~~~~~~~~~~~  141 (301)
T d1l0qa2          89 YVTNMASSTLSVIDTTSNT--------------------------VAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVS  141 (301)
T ss_dssp             EEEETTTTEEEEEETTTTE--------------------------EEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred             cccccccceeeecccccce--------------------------eeeecc-ccccceEEEeecCCCeeeeeecccccee
Confidence            54 5567789999987652                          333333 4456677889999987754 44577788


Q ss_pred             EeeCCCCeEEEEeecC
Q psy8430         297 LFDVETGTILQSLTGH  312 (361)
Q Consensus       297 iwd~~~~~~~~~~~~h  312 (361)
                      +|+..++..+..+..+
T Consensus       142 ~~~~~~~~~~~~~~~~  157 (301)
T d1l0qa2         142 VINTVTKAVINTVSVG  157 (301)
T ss_dssp             EEETTTTEEEEEEECC
T ss_pred             eeeccccceeeecccC
Confidence            9998888777666543

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.42  E-value=1.4e-12  Score=112.78  Aligned_cols=159  Identities=7%  Similarity=-0.057  Sum_probs=109.3

Q ss_pred             EEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe-CCCCCeEEEEEecCCCEE-EEEECCCcEEEEeccccccccCCCCC
Q psy8430         167 VAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNKDLV-LSASGDKSVHIWQAVINWECLNNDND  244 (361)
Q Consensus       167 l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l-~s~~~d~~i~lwd~~~~~~~~~~~~~  244 (361)
                      ++|++++++|++++.|++|.+||+.+++.+.++. .|...+.+++|+|||+++ ++++.++.|.+||+.+++.+      
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~------   75 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNT------   75 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEE------
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeee------
Confidence            4689999999999999999999999999999887 456778999999999986 45567899999999877432      


Q ss_pred             CCCCCCCCCCCCceecccccEEEeCC------CCcEEEEEEcCCCCEEEEEe------------CCCcEEEeeCCCCeEE
Q psy8430         245 SDLDESKEPDESSITLRTPVKELLGH------SNVVIAADWLSDGEQVITAS------------WDRVANLFDVETGTIL  306 (361)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~s~~------------~d~~v~iwd~~~~~~~  306 (361)
                                          ..+...      ...+..++|+|+|+++++++            .++.+.+||..+++..
T Consensus        76 --------------------~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  135 (346)
T d1jmxb_          76 --------------------FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA  135 (346)
T ss_dssp             --------------------EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB
T ss_pred             --------------------eeecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceee
Confidence                                222111      12345689999999998775            4678899999887766


Q ss_pred             EEeecCCC--CCeEEEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeeccc
Q psy8430         307 QSLTGHDE--EPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDI  357 (361)
Q Consensus       307 ~~~~~h~~--~v~~~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h  357 (361)
                      ..+..+..  .+.....+........++.+.+|  |..+    ...+..+..|
T Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~  182 (346)
T d1jmxb_         136 KPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKM--DVKT----GKYTVALPLR  182 (346)
T ss_dssp             CCSEEEECCSSCCCEEECTTSCEEEESSSEEEE--CTTT----CCEEEEECST
T ss_pred             eEEEeeeccCceEEEEecCCCEEEEeCCcceEE--EccC----CCEEEEEecC
Confidence            55543322  22222222222112234567788  6632    3344555443

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.37  E-value=1.8e-10  Score=97.22  Aligned_cols=163  Identities=18%  Similarity=0.136  Sum_probs=118.3

Q ss_pred             ceeeeEEeeccCCCeEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECC-CcE
Q psy8430         150 SCYKIRSFSGHRDGVWDVAVRPGQPVLG-SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD-KSV  227 (361)
Q Consensus       150 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~-s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d-~~i  227 (361)
                      +.+....+..+ ..+.++.|+|++..++ ++..++.+.+|+..++..+..+. +...+.+++++|++..+++++.+ +.+
T Consensus       105 ~~~~~~~~~~~-~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (301)
T d1l0qa2         105 SNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS-VGRSPKGIAVTPDGTKVYVANFDSMSI  182 (301)
T ss_dssp             TTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CCSSEEEEEECTTSSEEEEEETTTTEE
T ss_pred             cceeeeecccc-ccceEEEeecCCCeeeeeeccccceeeeeccccceeeecc-cCCCceEEEeeccccceeeeccccccc
Confidence            34555655544 5678899999998665 55668899999999999888887 45678899999999998888776 456


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC---CCcEEEeeCCCCe
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW---DRVANLFDVETGT  304 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---d~~v~iwd~~~~~  304 (361)
                      .+|+....                           ...........+..++|++++..++.++.   ++.|.+||..+++
T Consensus       183 ~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~  235 (301)
T d1l0qa2         183 SVIDTVTN---------------------------SVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK  235 (301)
T ss_dssp             EEEETTTT---------------------------EEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE
T ss_pred             ccccccce---------------------------eeeecccccCCcceeeccccccccccccccceeeeeeeeecCCCe
Confidence            67765433                           22222234456778999999998876654   4679999999999


Q ss_pred             EEEEeecCCCCCeEEEEEcCCC--cc--cCCCeEEEEcCCCCCC
Q psy8430         305 ILQSLTGHDEEPHILCVSSYYS--KV--SCDLFQRIQHLDCGTS  344 (361)
Q Consensus       305 ~~~~~~~h~~~v~~~~~s~s~~--~v--~~dg~i~iW~~d~~~~  344 (361)
                      .+.++..+. .+..+.+++++.  +|  +.|+.|++|  |+.|+
T Consensus       236 ~~~~~~~~~-~~~~va~spdg~~l~va~~~~~~i~v~--D~~t~  276 (301)
T d1l0qa2         236 ITARIPVGP-DPAGIAVTPDGKKVYVALSFCNTVSVI--DTATN  276 (301)
T ss_dssp             EEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEE--ETTTT
T ss_pred             EEEEEcCCC-CEEEEEEeCCCCEEEEEECCCCeEEEE--ECCCC
Confidence            998887544 455656665522  22  379999999  87443

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.36  E-value=3.5e-11  Score=103.29  Aligned_cols=140  Identities=11%  Similarity=0.009  Sum_probs=105.1

Q ss_pred             CEEEEEeCCCcEEEEeCCCCeEEEEEeC--CCCCeEEEEEecCCCEE-EEEECCCcEEEEeccccccccCCCCCCCCCCC
Q psy8430         174 PVLGSASADRTVRLWSTQTGKCVLQYSG--HSGSVNSVRFLPNKDLV-LSASGDKSVHIWQAVINWECLNNDNDSDLDES  250 (361)
Q Consensus       174 ~~l~s~s~d~~i~~wd~~~~~~~~~~~~--h~~~v~~v~~~~~~~~l-~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~  250 (361)
                      .++++++.|++|.+||+.+++.+..+..  +...+.+++|+|+|+++ ++++.++.|.+||+.+++.             
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~-------------   68 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET-------------   68 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCE-------------
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcE-------------
Confidence            4899999999999999999999998874  34568899999999987 5667899999999987642             


Q ss_pred             CCCCCCceecccccEEEeCCC-----CcEEEEEEcCCCCEEEEEe------------CCCcEEEeeCCCCeEEEEeecCC
Q psy8430         251 KEPDESSITLRTPVKELLGHS-----NVVIAADWLSDGEQVITAS------------WDRVANLFDVETGTILQSLTGHD  313 (361)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~s~~------------~d~~v~iwd~~~~~~~~~~~~h~  313 (361)
                                   +..+..+.     ..+..++|+|+++++++++            .+..+.+||..+++....+..+.
T Consensus        69 -------------~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  135 (337)
T d1pbyb_          69 -------------LGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR  135 (337)
T ss_dssp             -------------EEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS
T ss_pred             -------------EEEEecCCCcccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccccC
Confidence                         33333322     2344689999999998876            46789999999999988887544


Q ss_pred             CCCeEEEEEcCCCc-ccCCCeEEEEcCCCC
Q psy8430         314 EEPHILCVSSYYSK-VSCDLFQRIQHLDCG  342 (361)
Q Consensus       314 ~~v~~~~~s~s~~~-v~~dg~i~iW~~d~~  342 (361)
                       .+..+.+++.+.+ ++.++.+.+|  |..
T Consensus       136 -~~~~~~~s~dg~~l~~~~~~~~~~--d~~  162 (337)
T d1pbyb_         136 -QITMLAWARDGSKLYGLGRDLHVM--DPE  162 (337)
T ss_dssp             -SCCCEEECTTSSCEEEESSSEEEE--ETT
T ss_pred             -CceEEEEcCCCCEEEEEcCCccee--eee
Confidence             4555666655332 1234567889  763

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.36  E-value=2.2e-10  Score=98.60  Aligned_cols=211  Identities=12%  Similarity=0.046  Sum_probs=134.0

Q ss_pred             eccceeEEeeecCccceeeeEEee-ccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCeEEEEEeCCC------CCe
Q psy8430         135 VQTSKIVSSFKTSLLSCYKIRSFS-GHRDGVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGHS------GSV  206 (361)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~l~-~h~~~V~~l~~~~~~~~l-~s~s~d~~i~~wd~~~~~~~~~~~~h~------~~v  206 (361)
                      +..+..+.+|+.  .+.+++++++ .|...+.+++|+|||+++ ++++.++.|.+||+.+++.+..+....      ..+
T Consensus        14 ~~~~~~v~v~D~--~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~   91 (346)
T d1jmxb_          14 TNYPNNLHVVDV--ASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSM   91 (346)
T ss_dssp             EETTTEEEEEET--TTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECS
T ss_pred             EcCCCEEEEEEC--CCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecccccccccCCce
Confidence            333444555544  4557777776 456678899999999976 556678999999999999887776332      245


Q ss_pred             EEEEEecCCCEEEEEE------------CCCcEEEEeccccccccCCCC--------------CC-------C-------
Q psy8430         207 NSVRFLPNKDLVLSAS------------GDKSVHIWQAVINWECLNNDN--------------DS-------D-------  246 (361)
Q Consensus       207 ~~v~~~~~~~~l~s~~------------~d~~i~lwd~~~~~~~~~~~~--------------~~-------~-------  246 (361)
                      ..++|+|+|+++++++            .++.+.+|+..++........              ..       .       
T Consensus        92 ~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (346)
T d1jmxb_          92 YSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVK  171 (346)
T ss_dssp             SCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEESSSEEEECTT
T ss_pred             EEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEEeCCcceEEEcc
Confidence            6889999999887664            467788888876644321000              00       0       


Q ss_pred             -------CCC-------CCCCCCCc----------e----------------------------ecc---cccEEEeCCC
Q psy8430         247 -------LDE-------SKEPDESS----------I----------------------------TLR---TPVKELLGHS  271 (361)
Q Consensus       247 -------~~~-------~~~~~~~~----------~----------------------------~~~---~~~~~~~~~~  271 (361)
                             ...       ...+....          .                            ...   ........|.
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (346)
T d1jmxb_         172 TGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLT  251 (346)
T ss_dssp             TCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECS
T ss_pred             CCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCceEEEEeeccc
Confidence                   000       00000000          0                            000   0011223456


Q ss_pred             CcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC--cc-cCCCeEEEEcCCCCCCCCcc
Q psy8430         272 NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS--KV-SCDLFQRIQHLDCGTSENPI  348 (361)
Q Consensus       272 ~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~--~v-~~dg~i~iW~~d~~~~~~~~  348 (361)
                      ..+..+.+++++.+++.+.. +.|.+||..+++.+..+. +...+.++.+++++.  ++ +.||.|+||  |..|    .
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~~~~~~~~-~~~~~~~va~s~DG~~l~v~~~d~~v~v~--D~~t----~  323 (346)
T d1jmxb_         252 ELYFTGLRSPKDPNQIYGVL-NRLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVF--NPDT----L  323 (346)
T ss_dssp             SCEEEEEECSSCTTEEEEEE-SEEEEEETTTTEEEEEEE-CSSCCCEEEECSSSSCEEEESBSSEEEEE--ETTT----T
T ss_pred             ceeEEEEEeCCCCEEEEecC-CeEEEEECCCCcEEEEEc-CCCCEEEEEEcCCCCEEEEEeCCCcEEEE--ECcc----C
Confidence            67788889988888877664 679999999999998886 344577766666533  22 489999999  8733    4


Q ss_pred             eeeeeec
Q psy8430         349 HSVCVFQ  355 (361)
Q Consensus       349 ~~v~~~~  355 (361)
                      +++..+.
T Consensus       324 ~~i~~i~  330 (346)
T d1jmxb_         324 EKVKNIK  330 (346)
T ss_dssp             EEEEEEE
T ss_pred             CEEEEEE
Confidence            4555555

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.25  E-value=3.7e-10  Score=96.75  Aligned_cols=145  Identities=13%  Similarity=0.099  Sum_probs=101.1

Q ss_pred             eccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCeEEEE---EeCCCCCeEEEE
Q psy8430         135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSA-SADRTVRLWSTQTGKCVLQ---YSGHSGSVNSVR  210 (361)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~-s~d~~i~~wd~~~~~~~~~---~~~h~~~v~~v~  210 (361)
                      ...+..+.+|.......-.+.....|.+.|.+|+|+|||++|+++ ..|+.|++|++........   ...+...+..++
T Consensus        10 ~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~   89 (333)
T d1ri6a_          10 SPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHIS   89 (333)
T ss_dssp             EGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEE
T ss_pred             CCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCceEEE
Confidence            344555666665443332223334588999999999999988555 4589999999976532222   223556788899


Q ss_pred             EecCCCEEEEEEC-CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy8430         211 FLPNKDLVLSASG-DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA  289 (361)
Q Consensus       211 ~~~~~~~l~s~~~-d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~  289 (361)
                      |+|+|+++++++. ++.+.+|+......                        ........+...+.++.++|++++++++
T Consensus        90 ~spDg~~l~v~~~~~~~v~~~~~~~~~~------------------------~~~~~~~~~~~~~~~v~~s~d~~~~~~~  145 (333)
T d1ri6a_          90 TDHQGQFVFVGSYNAGNVSVTRLEDGLP------------------------VGVVDVVEGLDGCHSANISPDNRTLWVP  145 (333)
T ss_dssp             ECTTSSEEEEEETTTTEEEEEEEETTEE------------------------EEEEEEECCCTTBCCCEECTTSSEEEEE
T ss_pred             EcCCCCEEeecccCCCceeeeccccccc------------------------eecccccCCCccceEEEeeecceeeecc
Confidence            9999999998885 66899998654311                        1233344566778889999999998888


Q ss_pred             eCC-CcEEEeeCCCC
Q psy8430         290 SWD-RVANLFDVETG  303 (361)
Q Consensus       290 ~~d-~~v~iwd~~~~  303 (361)
                      +.+ ..+.+|+..+.
T Consensus       146 ~~~~~~i~~~~~~~~  160 (333)
T d1ri6a_         146 ALKQDRICLFTVSDD  160 (333)
T ss_dssp             EGGGTEEEEEEECTT
T ss_pred             ccccceeeEEEeccC
Confidence            754 56899998754

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.24  E-value=8.4e-10  Score=96.36  Aligned_cols=92  Identities=11%  Similarity=-0.073  Sum_probs=68.6

Q ss_pred             EeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeC----------CCcEEEEeCCCCeEEEEEeCCCCCe-----
Q psy8430         142 SSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASA----------DRTVRLWSTQTGKCVLQYSGHSGSV-----  206 (361)
Q Consensus       142 ~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~----------d~~i~~wd~~~~~~~~~~~~h~~~v-----  206 (361)
                      ..|..+..+++.+.++.++..+  .++|+|||.+|++++.          ++.|.+||..+++.+..+..+....     
T Consensus        48 ~v~v~D~~tg~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~  125 (373)
T d2madh_          48 QQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGP  125 (373)
T ss_pred             eEEEEECCCCCEEEEEeCCCCc--cEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCCcEEEEEecCCcceeEecc
Confidence            3455566778888888877655  7999999999988753          5789999999999888877665443     


Q ss_pred             --EEEEEecCCCEEEEEE--CCCcEEEEecccc
Q psy8430         207 --NSVRFLPNKDLVLSAS--GDKSVHIWQAVIN  235 (361)
Q Consensus       207 --~~v~~~~~~~~l~s~~--~d~~i~lwd~~~~  235 (361)
                        ..+.|+++++.++...  .++.+.+|+....
T Consensus       126 ~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~  158 (373)
T d2madh_         126 YSWMNANTPNNADLLFFQFAAGPAVGLVVQGGS  158 (373)
T ss_pred             CCCcEEEEeCCCcEEEEEEcCCCceEEeeccCC
Confidence              4567888888765544  4567888887544

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.17  E-value=9.2e-10  Score=96.09  Aligned_cols=148  Identities=9%  Similarity=-0.133  Sum_probs=101.3

Q ss_pred             ccCCCeEEEEEcCCCCEEEEE-----eCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE----------C
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSA-----SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS----------G  223 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~-----s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~----------~  223 (361)
                      .+.+++.+++++|||..++..     +.++.|.+||..+++.+..+..+...  .++|+|+|+++++++          .
T Consensus        18 ~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~~~   95 (373)
T d2madh_          18 AADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKR   95 (373)
T ss_pred             cCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCCc--cEEEcCCCCEEEEEeecCCccccccc
Confidence            688999999999999987664     23467999999999999988765543  799999999998875          4


Q ss_pred             CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCc-------EEEEEEcCCCCEEEEEe--CCCc
Q psy8430         224 DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNV-------VIAADWLSDGEQVITAS--WDRV  294 (361)
Q Consensus       224 d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------v~~~~~~~~~~~l~s~~--~d~~  294 (361)
                      ++.|.+||+.+++..                          ..+..+...       ...+.|+++++.++...  .++.
T Consensus        96 ~~~v~v~D~~t~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~  149 (373)
T d2madh_          96 TDYVEVFDPVTFLPI--------------------------ADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA  149 (373)
T ss_pred             ceEEEEEECCCCcEE--------------------------EEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCc
Confidence            578999999877432                          222222221       23467888888765554  3567


Q ss_pred             EEEeeCCCCeEEEEeecCCCCCe-----EEEEEcCCCcccCCCeEEEEcCCC
Q psy8430         295 ANLFDVETGTILQSLTGHDEEPH-----ILCVSSYYSKVSCDLFQRIQHLDC  341 (361)
Q Consensus       295 v~iwd~~~~~~~~~~~~h~~~v~-----~~~~s~s~~~v~~dg~i~iW~~d~  341 (361)
                      +.+|+..+++.............     .++++.+     .||.+.+|  |.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~v~~~-----~dg~~~~~--~~  194 (373)
T d2madh_         150 VGLVVQGGSSDDQLLSSPTCYHIHPGAPSTFYLLC-----AQGGLAKT--DH  194 (373)
T ss_pred             eEEeeccCCeEEEEeccceeEEEecCCCcEEEEEc-----CCCeEEEE--Ec
Confidence            88888877665544432211110     1334455     78888888  55

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.15  E-value=3.1e-10  Score=97.31  Aligned_cols=142  Identities=11%  Similarity=0.063  Sum_probs=94.6

Q ss_pred             EEEEEeCCCcEEEEeCCCCe---EEEEEeCCCCCeEEEEEecCCCEEEEEE-CCCcEEEEeccccccccCCCCCCCCCCC
Q psy8430         175 VLGSASADRTVRLWSTQTGK---CVLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKSVHIWQAVINWECLNNDNDSDLDES  250 (361)
Q Consensus       175 ~l~s~s~d~~i~~wd~~~~~---~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+++++.|++|++|++....   .+..+ .|.+.|.+++|+|+|++|++++ .|+.|.+|++......            
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~-~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~------------   72 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA------------   72 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC------------
T ss_pred             EEEECCCCCcEEEEEEcCCCCeEEEEEE-cCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCc------------
Confidence            56788899999999987543   23333 4889999999999999986555 5899999998644211            


Q ss_pred             CCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEeeCCCCeEEEEe--ecCCCCCeEEEEEcCCCc
Q psy8430         251 KEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-DRVANLFDVETGTILQSL--TGHDEEPHILCVSSYYSK  327 (361)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd~~~~~~~~~~--~~h~~~v~~~~~s~s~~~  327 (361)
                                 ........+...+..++|+|+|++|++++. ++.|.+|+..........  ..+...+.++.++.+..+
T Consensus        73 -----------~~~~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~  141 (333)
T d1ri6a_          73 -----------LTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRT  141 (333)
T ss_dssp             -----------EEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSE
T ss_pred             -----------EEEeeecccCCCceEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeeccee
Confidence                       011112224445677999999999999885 667999988766544333  334444544444443111


Q ss_pred             --c--cCCCeEEEEcCCCC
Q psy8430         328 --V--SCDLFQRIQHLDCG  342 (361)
Q Consensus       328 --v--~~dg~i~iW~~d~~  342 (361)
                        +  ..+..|.+|  +..
T Consensus       142 ~~~~~~~~~~i~~~--~~~  158 (333)
T d1ri6a_         142 LWVPALKQDRICLF--TVS  158 (333)
T ss_dssp             EEEEEGGGTEEEEE--EEC
T ss_pred             eeccccccceeeEE--Eec
Confidence              1  156678888  653

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.14  E-value=7.4e-09  Score=89.39  Aligned_cols=93  Identities=11%  Similarity=-0.065  Sum_probs=69.4

Q ss_pred             eeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEE----------eCCCcEEEEeCCCCeEEEEEeCCC-------CC
Q psy8430         143 SFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSA----------SADRTVRLWSTQTGKCVLQYSGHS-------GS  205 (361)
Q Consensus       143 ~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~----------s~d~~i~~wd~~~~~~~~~~~~h~-------~~  205 (361)
                      +|.++..+++.+.++..+..+  .++|+|||++|+.+          +.|+.|++||..+++.+..+..+.       ..
T Consensus        30 v~v~D~~tg~~~~~~~~g~~~--~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~  107 (355)
T d2bbkh_          30 QFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTY  107 (355)
T ss_dssp             EEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCC
T ss_pred             EEEEECCCCcEEEEEECCCCC--ceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCC
Confidence            344455677788888776555  79999999987764          347899999999999888775433       23


Q ss_pred             eEEEEEecCCCEEEEEE--CCCcEEEEecccccc
Q psy8430         206 VNSVRFLPNKDLVLSAS--GDKSVHIWQAVINWE  237 (361)
Q Consensus       206 v~~v~~~~~~~~l~s~~--~d~~i~lwd~~~~~~  237 (361)
                      ...++|+|+++.++.++  .+..+.+|+..++..
T Consensus       108 ~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~  141 (355)
T d2bbkh_         108 PWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAF  141 (355)
T ss_dssp             GGGEEECTTSSEEEEEECSSSCEEEEEETTTTEE
T ss_pred             CceEEEecCCCeeEEecCCCCceeeeeecCCCcE
Confidence            45688999999887765  456789998877644

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.99  E-value=4.1e-08  Score=85.47  Aligned_cols=95  Identities=8%  Similarity=-0.078  Sum_probs=73.3

Q ss_pred             EEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEEeCCCC------
Q psy8430         141 VSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS----------ADRTVRLWSTQTGKCVLQYSGHSG------  204 (361)
Q Consensus       141 ~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s----------~d~~i~~wd~~~~~~~~~~~~h~~------  204 (361)
                      ...|..+..+++.+.++.++..+  .++|+|||..|+.++          .|++|.+||..+++.+..+..+..      
T Consensus        46 ~~~~~~d~~~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g  123 (368)
T d1mdah_          46 TENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG  123 (368)
T ss_dssp             EEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred             ceEEEEeCCCCcEEEEEeCCCCC--cceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceeccc
Confidence            34555566777788888877765  589999999888765          367899999999998888764332      


Q ss_pred             -CeEEEEEecCCCEEEEEE-CCCcEEEEecccccc
Q psy8430         205 -SVNSVRFLPNKDLVLSAS-GDKSVHIWQAVINWE  237 (361)
Q Consensus       205 -~v~~v~~~~~~~~l~s~~-~d~~i~lwd~~~~~~  237 (361)
                       ....++|+|+|++++.+. .++.+.+||+.+++.
T Consensus       124 ~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~  158 (368)
T d1mdah_         124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD  158 (368)
T ss_dssp             CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred             CCccceEECCCCCEEEEEeCCCCeEEEEECCCCcE
Confidence             234689999999988776 578999999887754

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.98  E-value=4.9e-09  Score=90.57  Aligned_cols=118  Identities=11%  Similarity=0.048  Sum_probs=86.0

Q ss_pred             EEEEcCCCCEEEEEe-----CCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEE----------ECCCcEEEE
Q psy8430         166 DVAVRPGQPVLGSAS-----ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA----------SGDKSVHIW  230 (361)
Q Consensus       166 ~l~~~~~~~~l~s~s-----~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~----------~~d~~i~lw  230 (361)
                      -.+.+|||..++...     .+.+|.+||..+++.+.++..+..  ..++|+|+|+.|+.+          +.|+.|++|
T Consensus         6 ~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~--~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~   83 (355)
T d2bbkh_           6 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL--PNPVVADDGSFIAHASTVFSRIARGERTDYVEVF   83 (355)
T ss_dssp             CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSS--CEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             eEeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCC--CceEEcCCCCEEEEEeCCCccccccCCCCEEEEE
Confidence            345689999887653     456799999999999988875544  479999999988754          357899999


Q ss_pred             eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCC-------CCcEEEEEEcCCCCEEEEEe--CCCcEEEeeCC
Q psy8430         231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGH-------SNVVIAADWLSDGEQVITAS--WDRVANLFDVE  301 (361)
Q Consensus       231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~s~~--~d~~v~iwd~~  301 (361)
                      |+.++..                          ...+..+       ......++|+|+|++++.++  .+..+.+||..
T Consensus        84 D~~t~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~  137 (355)
T d2bbkh_          84 DPVTLLP--------------------------TADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE  137 (355)
T ss_dssp             CTTTCCE--------------------------EEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETT
T ss_pred             ECCCCCE--------------------------EEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecC
Confidence            9987632                          2222211       12234578999999888765  45678999999


Q ss_pred             CCeEEEEeec
Q psy8430         302 TGTILQSLTG  311 (361)
Q Consensus       302 ~~~~~~~~~~  311 (361)
                      +++.+..+..
T Consensus       138 ~~~~~~~~~~  147 (355)
T d2bbkh_         138 GKAFKRMLDV  147 (355)
T ss_dssp             TTEEEEEEEC
T ss_pred             CCcEeeEEec
Confidence            9887776654

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.84  E-value=2.1e-08  Score=87.37  Aligned_cols=147  Identities=11%  Similarity=-0.119  Sum_probs=103.2

Q ss_pred             cCCCeEEEEEcCCCCEE--E-EEeCCCc--EEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE----------CC
Q psy8430         160 HRDGVWDVAVRPGQPVL--G-SASADRT--VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS----------GD  224 (361)
Q Consensus       160 h~~~V~~l~~~~~~~~l--~-s~s~d~~--i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~----------~d  224 (361)
                      +.++...++..+++...  + .+..+++  +.+||..+++.+..+.++...  .++|+|+|+.++.++          .|
T Consensus        18 ~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d   95 (368)
T d1mdah_          18 SDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRT   95 (368)
T ss_dssp             CCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEE
T ss_pred             cCCCccccccCCCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEeCCCCC--cceECCCCCEEEEEcccCccccccccC
Confidence            45555666677777742  2 2344444  667799999998888866654  589999999888754          36


Q ss_pred             CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCC-------CcEEEEEEcCCCCEEEEEe-CCCcEE
Q psy8430         225 KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHS-------NVVIAADWLSDGEQVITAS-WDRVAN  296 (361)
Q Consensus       225 ~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~s~~-~d~~v~  296 (361)
                      +.|.+||..+++.                          ...+..+.       .....++|+|||++++.+. .++.+.
T Consensus        96 ~~v~v~D~~t~~~--------------------------~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~  149 (368)
T d1mdah_          96 DYVEVFDPVTFLP--------------------------IADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAA  149 (368)
T ss_dssp             EEEEEECTTTCCE--------------------------EEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEE
T ss_pred             CeEEEEECCCCcE--------------------------eeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEE
Confidence            7899999877632                          22222211       1223578999999998876 569999


Q ss_pred             EeeCCCCeEEEEeecCCCCCeE-----EEEEcCCCcccCCCeEEEEcC
Q psy8430         297 LFDVETGTILQSLTGHDEEPHI-----LCVSSYYSKVSCDLFQRIQHL  339 (361)
Q Consensus       297 iwd~~~~~~~~~~~~h~~~v~~-----~~~s~s~~~v~~dg~i~iW~~  339 (361)
                      +||+.+++.+..+..+......     ..+..+     .||.+.+|++
T Consensus       150 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-----~Dg~~~~~~~  192 (368)
T d1mdah_         150 GLSVPGASDDQLTKSASCFHIHPGAAATHYLGS-----CPASLAASDL  192 (368)
T ss_dssp             EEEETTTEEEEEEECSSCCCCEEEETTEEECCC-----CTTSCEEEEC
T ss_pred             EEECCCCcEeEEeeccCcceEccCCCceEEEEc-----CCCCEEEEEe
Confidence            9999999999988776544322     444555     8999999833

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.82  E-value=1e-08  Score=92.64  Aligned_cols=115  Identities=10%  Similarity=0.061  Sum_probs=92.0

Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeC-----CCCCeEEEEEecCCCEEEEEEC---------CCcEEEEe
Q psy8430         166 DVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG-----HSGSVNSVRFLPNKDLVLSASG---------DKSVHIWQ  231 (361)
Q Consensus       166 ~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~-----h~~~v~~v~~~~~~~~l~s~~~---------d~~i~lwd  231 (361)
                      .+.|.+++.++..  .|+.+.+||+.+++....+..     |...|.++.|+||++.|+.++.         ++.+.+||
T Consensus        21 ~~~W~~d~~~~~~--~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d   98 (470)
T d2bgra1          21 SLRWISDHEYLYK--QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD   98 (470)
T ss_dssp             CCEECSSSEEEEE--SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred             CCEeCCCCEEEEE--cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEE
Confidence            4779999987753  578899999999987665543     4578999999999999988753         56788999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430         232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~  310 (361)
                      +.++                           ....+..+...+..+.|||||++++... ++.+++|+..++...+...
T Consensus        99 ~~~~---------------------------~~~~l~~~~~~~~~~~~SPDG~~ia~~~-~~~l~~~~~~~g~~~~~t~  149 (470)
T d2bgra1          99 LNKR---------------------------QLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITW  149 (470)
T ss_dssp             TTTT---------------------------EECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCS
T ss_pred             CCCC---------------------------cccccccCCccccccccccCcceeeEee-cccceEEECCCCceeeeee
Confidence            9876                           3344566788899999999999999965 6789999999887765443

>d1uuja_ a.221.1.1 (A:) Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
superfamily: Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
family: Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
domain: Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.77  E-value=3.9e-10  Score=71.39  Aligned_cols=72  Identities=14%  Similarity=0.095  Sum_probs=63.1

Q ss_pred             ccccc--cccccceeecccchhhhHHHhhcCCcCCcccCChhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhcc
Q psy8430          10 KSTKH--KRTASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLD   87 (361)
Q Consensus        10 ~~~~~--~~~~~~~~~~l~~~~~~~~~~~L~~e~~~~~~~~~~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~~   87 (361)
                      +||+|  +|+++.|++||..+|+++++++|++|.+.. ++++..++       ++.-+++.|..+.+||+++.+|+.+..
T Consensus         1 iLt~rQ~eeL~kaI~~Yl~~~~~~~~~~~l~~e~~l~-~~~~~~~k-------y~glLEKKWtSViRLQkKImdLE~~~~   72 (76)
T d1uuja_           1 VLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELD-MNEELDKK-------YAGLLEKKWTSVIRLQKKVMELESKLN   72 (76)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTTCC-CCHHHHHH-------HTTHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHCCC-CChhhhhh-------hcCcchhHHHHHHHHHHHHHHHHHHHH
Confidence            57888  999999999999999999999999988744 66666666       788899999999999999999998866


Q ss_pred             cc
Q psy8430          88 RE   89 (361)
Q Consensus        88 ~~   89 (361)
                      ..
T Consensus        73 ~l   74 (76)
T d1uuja_          73 EA   74 (76)
T ss_dssp             HT
T ss_pred             Hh
Confidence            54

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.72  E-value=8.9e-09  Score=92.98  Aligned_cols=133  Identities=8%  Similarity=0.005  Sum_probs=88.2

Q ss_pred             EeeccCCCeEEEEEcCCCCEEEEEeC---------CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCc
Q psy8430         156 SFSGHRDGVWDVAVRPGQPVLGSASA---------DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS  226 (361)
Q Consensus       156 ~l~~h~~~V~~l~~~~~~~~l~s~s~---------d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~  226 (361)
                      ++..|...|.++.|+|||++|+.++.         ++.+.+||+.+++ +..+..+...+..+.|+|+|+.+|.. .++.
T Consensus        56 ~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~-~~~l~~~~~~~~~~~~SPDG~~ia~~-~~~~  133 (470)
T d2bgra1          56 TFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ-LITEERIPNNTQWVTWSPVGHKLAYV-WNND  133 (470)
T ss_dssp             TTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE-ECCSSCCCTTEEEEEECSSTTCEEEE-ETTE
T ss_pred             hhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCc-ccccccCCccccccccccCcceeeEe-eccc
Confidence            44566788999999999999988753         5678899999887 45577789999999999999999985 4778


Q ss_pred             EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc-EEEe
Q psy8430         227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRV-ANLF  298 (361)
Q Consensus       227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~-v~iw  298 (361)
                      +.+|+..++..............       .......+. .....+....+.|+|||++|+....|.+ +..|
T Consensus       134 l~~~~~~~g~~~~~t~~~~~~~~-------~~g~~d~~~-~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~  198 (470)
T d2bgra1         134 IYVKIEPNLPSYRITWTGKEDII-------YNGITDWVY-EEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLI  198 (470)
T ss_dssp             EEEESSTTSCCEECCSCCBTTTE-------EESBCCHHH-HHHTSSSSBCEEECTTSSEEEEEEEECTTCCEE
T ss_pred             ceEEECCCCceeeeeeccCCCcc-------cccccceee-eeeecCCccccEECCCCCccceeEecCCcCceE
Confidence            99999887754322111000000       000000000 0012234456789999999999876544 4433

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.41  E-value=4.1e-05  Score=64.05  Aligned_cols=119  Identities=17%  Similarity=0.102  Sum_probs=90.0

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCC
Q psy8430         163 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNND  242 (361)
Q Consensus       163 ~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~  242 (361)
                      .+..++++|||+++++...+++|..|+.. +.. ..+......+.+++|+|+|+++++...++.+..|+.......    
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~-g~~-~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~----  102 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPD-GNQ-QIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT----  102 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-EEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC----
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCC-CCE-EEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccc----
Confidence            57889999999999999999999998865 432 334446788999999999999999888888888876432110    


Q ss_pred             CCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEE
Q psy8430         243 NDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  306 (361)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~  306 (361)
                                         ...............+.+.++|.++++.+.++.+..+|...+...
T Consensus       103 -------------------~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~  147 (302)
T d2p4oa1         103 -------------------VETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGS  147 (302)
T ss_dssp             -------------------EEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred             -------------------eeeccccCCccccceeEEccCCCEEeeccccccceeeeccCCcce
Confidence                               001111234556889999999999999888999999998876543

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=98.34  E-value=6.5e-05  Score=64.70  Aligned_cols=134  Identities=10%  Similarity=0.012  Sum_probs=77.9

Q ss_pred             CCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCC-CeE--EEEEe--CCCCCeEEEEEecCCCEEEEEE-CCCcEEEEecc
Q psy8430         161 RDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQT-GKC--VLQYS--GHSGSVNSVRFLPNKDLVLSAS-GDKSVHIWQAV  233 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~s~-d~~i~~wd~~~-~~~--~~~~~--~h~~~v~~v~~~~~~~~l~s~~-~d~~i~lwd~~  233 (361)
                      ...+.++.|+|+|+++++++. ...|.+|+... +..  .....  ........++|+|+++++.... .+++|.+|++.
T Consensus       144 ~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~  223 (365)
T d1jofa_         144 NTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVID  223 (365)
T ss_dssp             TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred             CCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEec
Confidence            345889999999998887764 34788887653 322  12222  3456789999999999876554 67899999986


Q ss_pred             ccccccCCCCC-CCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC------CCcEEEeeCCC
Q psy8430         234 INWECLNNDND-SDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW------DRVANLFDVET  302 (361)
Q Consensus       234 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~------d~~v~iwd~~~  302 (361)
                      ........... ........        .........+......+.++|+|++|+++..      .+.|..|++..
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~  291 (365)
T d1jofa_         224 PATHMPVYTHHSFPLIPPGI--------PDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRD  291 (365)
T ss_dssp             TTTCCEEEEEEEEESSCTTC--------CCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECT
T ss_pred             CCCceEEEEeeeeccccccc--------cccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecC
Confidence            54221000000 00000000        0000000122335667899999999988743      12376777653

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=98.24  E-value=1.4e-05  Score=70.08  Aligned_cols=59  Identities=12%  Similarity=-0.056  Sum_probs=47.1

Q ss_pred             ccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCeEEEEEe-CCCCCeEEEEEecCCCE
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSA-SADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNKDL  217 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~-s~d~~i~~wd~~~~~~~~~~~-~h~~~v~~v~~~~~~~~  217 (361)
                      .|...+....+.|||++|+.. ..+++|.++|+.+++....+. .+...+..++|+|+++.
T Consensus        69 ~hhP~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t  129 (441)
T d1qnia2          69 CHHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKT  129 (441)
T ss_dssp             BCCCEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBC
T ss_pred             ccCCCcceecccCCCCEEEEEcCCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCE
Confidence            455666677778999988655 567899999999998877665 46788999999999884

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=98.02  E-value=4.2e-05  Score=66.95  Aligned_cols=148  Identities=6%  Similarity=-0.030  Sum_probs=85.1

Q ss_pred             ceeeeEEee-ccCCCeEEEEEcCCCC--EEEEEeCCC-----------------cEEEEeCCCCeEEEEEeCCCCCeEEE
Q psy8430         150 SCYKIRSFS-GHRDGVWDVAVRPGQP--VLGSASADR-----------------TVRLWSTQTGKCVLQYSGHSGSVNSV  209 (361)
Q Consensus       150 ~~~~~~~l~-~h~~~V~~l~~~~~~~--~l~s~s~d~-----------------~i~~wd~~~~~~~~~~~~h~~~v~~v  209 (361)
                      +.+....+. .+...+..++|+|+|+  +++..+.+.                 .+..+|..+.+...++.. .+....+
T Consensus       103 t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~v-~~~p~~v  181 (441)
T d1qnia2         103 IMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIV-DGNLDNT  181 (441)
T ss_dssp             TTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEEEE-SSCCCCE
T ss_pred             CCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeEEEec-CCCccce
Confidence            334444433 3567899999999998  555555442                 234578887777766663 4567889


Q ss_pred             EEecCCCEEEEEECCC---------------cEEEEeccccccccCCCCCCCCCCCCCCCCCcee---cccccEEEeCCC
Q psy8430         210 RFLPNKDLVLSASGDK---------------SVHIWQAVINWECLNNDNDSDLDESKEPDESSIT---LRTPVKELLGHS  271 (361)
Q Consensus       210 ~~~~~~~~l~s~~~d~---------------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  271 (361)
                      .|+|+|+++++.+.+.               .|.+.+................   .........   ....+..+....
T Consensus       182 ~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v---~~~~v~vvd~~~~~~v~~~IPvgk  258 (441)
T d1qnia2         182 DADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTI---GDSKVPVVDGRGESEFTRYIPVPK  258 (441)
T ss_dssp             EECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCC---TTCCCCEEECSSSCSSEEEECCBS
T ss_pred             EECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEe---CCCCcEEEEcccCCceEEEEeCCC
Confidence            9999999988887653               2223332211111100000000   000111111   111233444433


Q ss_pred             CcEEEEEEcCCCCEEEE-EeCCCcEEEeeCCC
Q psy8430         272 NVVIAADWLSDGEQVIT-ASWDRVANLFDVET  302 (361)
Q Consensus       272 ~~v~~~~~~~~~~~l~s-~~~d~~v~iwd~~~  302 (361)
                       ....+.++|||+++++ +..+++|.+||+.+
T Consensus       259 -sPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k  289 (441)
T d1qnia2         259 -NPHGLNTSPDGKYFIANGKLSPTVSVIAIDK  289 (441)
T ss_dssp             -SCCCEEECTTSCEEEEECTTSSBEEEEEGGG
T ss_pred             -CccCceECCCCCEEEEeCCcCCcEEEEEeeh
Confidence             3467899999998754 67789999999875

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.01  E-value=0.00048  Score=56.54  Aligned_cols=158  Identities=15%  Similarity=0.164  Sum_probs=105.7

Q ss_pred             eeeeEEee-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe--CCCCCeEEEEEecCCCEEEEEECCCcE
Q psy8430         151 CYKIRSFS-GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKSV  227 (361)
Q Consensus       151 ~~~~~~l~-~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~~~d~~i  227 (361)
                      +.....+. ........+++.++|.++++....+.+.+++. +++.+..+.  .+......+++.++++.+++....+.|
T Consensus       102 g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~-~g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V  180 (279)
T d1q7fa_         102 GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCV  180 (279)
T ss_dssp             SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEE
T ss_pred             ccceeecCCCcccccceeccccCCcEEEEeeccceeeEecc-CCceeecccccccccccceeeeccceeEEeeeccccce
Confidence            34444443 24466788999999998888887788888886 466666653  456678899999999988888888999


Q ss_pred             EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE--eCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEeeCCCCe
Q psy8430         228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL--LGHSNVVIAADWLSDGEQVITASW-DRVANLFDVETGT  304 (361)
Q Consensus       228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd~~~~~  304 (361)
                      .+||....                           .+..+  .+.......++++++|+.+++-+. ++.|.+|+. +|+
T Consensus       181 ~~~d~~G~---------------------------~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~-~G~  232 (279)
T d1q7fa_         181 KVFNYEGQ---------------------------YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQ  232 (279)
T ss_dssp             EEEETTCC---------------------------EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSC
T ss_pred             eeeecCCc---------------------------eeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECC-CCC
Confidence            99986432                           22222  234456788999999997777554 456999984 588


Q ss_pred             EEEEeecCCC--CCeEEEEEcCC-Ccc-cCCCeEEEE
Q psy8430         305 ILQSLTGHDE--EPHILCVSSYY-SKV-SCDLFQRIQ  337 (361)
Q Consensus       305 ~~~~~~~h~~--~v~~~~~s~s~-~~v-~~dg~i~iW  337 (361)
                      .+.++.....  ....+.+...+ ++| ..++.|++|
T Consensus       233 ~~~~~~~~~~~~~p~~vav~~dG~l~V~~~n~~v~~f  269 (279)
T d1q7fa_         233 LISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIY  269 (279)
T ss_dssp             EEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEE
T ss_pred             EEEEEeCCCCCCCEeEEEEeCCCcEEEEeCCCeEEEE
Confidence            8877754332  23333333331 111 256667777

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.85  E-value=0.00039  Score=57.11  Aligned_cols=125  Identities=17%  Similarity=0.166  Sum_probs=90.0

Q ss_pred             eeeeEEe--eccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe--CCCCCeEEEEEecCCCEEEEEEC-CC
Q psy8430         151 CYKIRSF--SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASG-DK  225 (361)
Q Consensus       151 ~~~~~~l--~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~~~-d~  225 (361)
                      ++.+.++  ..+......++++++++++++....+.|.+||. +|+.+.++.  +.......|++.++|+++++-.. ++
T Consensus       144 g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~-~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~  222 (279)
T d1q7fa_         144 GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNF  222 (279)
T ss_dssp             SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSC
T ss_pred             CceeecccccccccccceeeeccceeEEeeeccccceeeeec-CCceeeeecccccccCCcccccccCCeEEEEECCCCc
Confidence            3444544  345677889999999999999888999999997 567777763  34556889999999998877554 45


Q ss_pred             cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe--CCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC
Q psy8430         226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  303 (361)
Q Consensus       226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~  303 (361)
                      .|.+|+....                           .+..+.  ........+++.|+|.++ .++.++.|++|...+.
T Consensus       223 ~v~~f~~~G~---------------------------~~~~~~~~~~~~~p~~vav~~dG~l~-V~~~n~~v~~fr~~~~  274 (279)
T d1q7fa_         223 NLTIFTQDGQ---------------------------LISALESKVKHAQCFDVALMDDGSVV-LASKDYRLYIYRYVQL  274 (279)
T ss_dssp             EEEEECTTSC---------------------------EEEEEEESSCCSCEEEEEEETTTEEE-EEETTTEEEEEECSCC
T ss_pred             EEEEECCCCC---------------------------EEEEEeCCCCCCCEeEEEEeCCCcEE-EEeCCCeEEEEEeeee
Confidence            7999974311                           222232  223467889999999654 5567899999998765


Q ss_pred             e
Q psy8430         304 T  304 (361)
Q Consensus       304 ~  304 (361)
                      .
T Consensus       275 ~  275 (279)
T d1q7fa_         275 A  275 (279)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=97.83  E-value=0.0028  Score=50.98  Aligned_cols=188  Identities=13%  Similarity=0.071  Sum_probs=98.8

Q ss_pred             eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCC---cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC-CCc
Q psy8430         151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADR---TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DKS  226 (361)
Q Consensus       151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~---~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~~  226 (361)
                      +.-.+.+..+...+...+|||||+.||-.....   .+.+.+...+... .+..+........|+|+|..++.... ++.
T Consensus        28 G~~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~i~~~~~~~~~  106 (269)
T d2hqsa1          28 GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGS  106 (269)
T ss_dssp             SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSS
T ss_pred             CCCcEEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCcee-EEeeeecccccceecCCCCeeeEeeecCCc
Confidence            334445556778899999999999998765543   4666676665543 44457888899999999998887654 333


Q ss_pred             EEEE--eccccccccCCCCCCCCCC-CCCCCCCc----------------eecccccEEEeCCCCcEEEEEEcCCCCEEE
Q psy8430         227 VHIW--QAVINWECLNNDNDSDLDE-SKEPDESS----------------ITLRTPVKELLGHSNVVIAADWLSDGEQVI  287 (361)
Q Consensus       227 i~lw--d~~~~~~~~~~~~~~~~~~-~~~~~~~~----------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  287 (361)
                      ..++  ................... ........                .........+..+........|+|+++.++
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~  186 (269)
T d2hqsa1         107 LNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMV  186 (269)
T ss_dssp             CEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEE
T ss_pred             cceeecccccccceeeeeccccccccccccccccceecccccCCceEeeeecccccceeeecccccccccccccccceeE
Confidence            2222  2222111111110000000 00000000                000011222334455677789999999988


Q ss_pred             EEeCCC-c--EEEeeCCCCeEEEEeecCCCCCeEEEEEcCCCc---c---cCCCeEEEEcCCC
Q psy8430         288 TASWDR-V--ANLFDVETGTILQSLTGHDEEPHILCVSSYYSK---V---SCDLFQRIQHLDC  341 (361)
Q Consensus       288 s~~~d~-~--v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~~---v---~~dg~i~iW~~d~  341 (361)
                      ..+.++ .  +.+.|...+..  .+..+........+|+++-.   +   .....|.+|++|.
T Consensus       187 ~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg  247 (269)
T d2hqsa1         187 MVSSNGGQQHIAKQDLATGGV--QVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDG  247 (269)
T ss_dssp             EEEECSSCEEEEEEETTTCCE--EECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTS
T ss_pred             EEeecCCceeeeEeecccccc--eEeecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCC
Confidence            776654 3  44556555543  23233444444344444211   1   1345677884444

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.66  E-value=0.0015  Score=52.84  Aligned_cols=115  Identities=10%  Similarity=-0.035  Sum_probs=81.4

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCC
Q psy8430         162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNN  241 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~  241 (361)
                      ....+++++++++++++-.....+..++............-......++++|+++++++...++.|..++......    
T Consensus        98 ~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~----  173 (260)
T d1rwia_          98 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ----  173 (260)
T ss_dssp             CSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCE----
T ss_pred             eecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeecccccccccccccccee----
Confidence            5578999999999888776777787777654432221112234567899999999888888888999998754311    


Q ss_pred             CCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC
Q psy8430         242 DNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  303 (361)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~  303 (361)
                                             ..+ .........++++++|.++++....+.|..++....
T Consensus       174 -----------------------~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~  213 (260)
T d1rwia_         174 -----------------------VVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST  213 (260)
T ss_dssp             -----------------------EECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCS
T ss_pred             -----------------------eeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCC
Confidence                                   111 133456788999999998888888888888876644

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=97.61  E-value=0.0024  Score=54.50  Aligned_cols=123  Identities=8%  Similarity=-0.026  Sum_probs=76.6

Q ss_pred             CCCeEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCeE--EE---EEe--------------CCCCCeEEEEEecCCCEEEE
Q psy8430         161 RDGVWDVAVRPGQPVLGSA-SADRTVRLWSTQTGKC--VL---QYS--------------GHSGSVNSVRFLPNKDLVLS  220 (361)
Q Consensus       161 ~~~V~~l~~~~~~~~l~s~-s~d~~i~~wd~~~~~~--~~---~~~--------------~h~~~v~~v~~~~~~~~l~s  220 (361)
                      ......++|+|+++++... -.+++|.+|++..+..  +.   ...              .+......+.++|+|+++++
T Consensus       192 g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyv  271 (365)
T d1jofa_         192 GDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFA  271 (365)
T ss_dssp             TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEE
T ss_pred             CCceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEE
Confidence            4567889999999977554 5688999999876532  21   111              11223567899999999887


Q ss_pred             EEC-C-----CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEe-CC
Q psy8430         221 ASG-D-----KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITAS-WD  292 (361)
Q Consensus       221 ~~~-d-----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~-~d  292 (361)
                      +.. +     +.|..|++.....+                    ..................++++| +|++|+++. .+
T Consensus       272 snr~~~~~~~~~i~~~~~~~~g~~--------------------~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s  331 (365)
T d1jofa_         272 SSRANKFELQGYIAGFKLRDCGSI--------------------EKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQE  331 (365)
T ss_dssp             EEEESSTTSCCEEEEEEECTTSCE--------------------EEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSS
T ss_pred             EcccCCCccceEEEEEEecCCCce--------------------eeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCC
Confidence            643 2     23666665432110                    00011112222344567789998 899887775 56


Q ss_pred             CcEEEeeCCCC
Q psy8430         293 RVANLFDVETG  303 (361)
Q Consensus       293 ~~v~iwd~~~~  303 (361)
                      +.|.+|+++..
T Consensus       332 ~~v~v~~~~~~  342 (365)
T d1jofa_         332 GWLEIYRWKDE  342 (365)
T ss_dssp             CEEEEEEEETT
T ss_pred             CeEEEEEEeCC
Confidence            88999987543

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.54  E-value=0.015  Score=47.63  Aligned_cols=142  Identities=8%  Similarity=-0.002  Sum_probs=94.5

Q ss_pred             CeEEEEEcCCCCEEEEEeCC----CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEE-EEECCCcEEEEecccccc
Q psy8430         163 GVWDVAVRPGQPVLGSASAD----RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIWQAVINWE  237 (361)
Q Consensus       163 ~V~~l~~~~~~~~l~s~s~d----~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~~i~lwd~~~~~~  237 (361)
                      .++++.+.|+|++.++...+    +.-.+|.+..++...... .-...+.++|+++++.++ +-+..+.|..+++.....
T Consensus       104 ~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~-~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~  182 (295)
T d2ghsa1         104 RSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFA-DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTG  182 (295)
T ss_dssp             EEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEE-EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTC
T ss_pred             cceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEee-ccCCcceeeecCCCceEEEeecccceeeEeeeccccc
Confidence            47889999999877765432    345667776776554444 334567899999998654 555677888888643211


Q ss_pred             ccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCe
Q psy8430         238 CLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPH  317 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~  317 (361)
                      ...                  ..........+..+....+++..+|.+.++.-..+.|..||. .|+.+..+.-....++
T Consensus       183 ~~~------------------~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~i~lP~~~~T  243 (295)
T d2ghsa1         183 LPT------------------GKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTT  243 (295)
T ss_dssp             CBS------------------SCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEE
T ss_pred             ccc------------------cceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEeeEecCCCCceE
Confidence            100                  000111222344556888999999998888777889999995 5888888877666677


Q ss_pred             EEEEEcC
Q psy8430         318 ILCVSSY  324 (361)
Q Consensus       318 ~~~~s~s  324 (361)
                      ++++-|.
T Consensus       244 ~~~FGG~  250 (295)
T d2ghsa1         244 CPAFIGP  250 (295)
T ss_dssp             EEEEEST
T ss_pred             EEEEeCC
Confidence            7666553

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=97.41  E-value=0.007  Score=50.28  Aligned_cols=152  Identities=13%  Similarity=0.041  Sum_probs=93.8

Q ss_pred             eEEEEEcCCCCEEEEEeC---------------CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC-----EEEEEEC
Q psy8430         164 VWDVAVRPGQPVLGSASA---------------DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-----LVLSASG  223 (361)
Q Consensus       164 V~~l~~~~~~~~l~s~s~---------------d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-----~l~s~~~  223 (361)
                      .+.++++++|++.++-..               +|.|..++. .++...... .-...+.++|+|++.     ++++-+.
T Consensus       119 pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~-dg~~~~~~~-~~~~pNGi~~~~d~d~~~~~lyv~d~~  196 (314)
T d1pjxa_         119 CNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTT-DGQMIQVDT-AFQFPNGIAVRHMNDGRPYQLIVAETP  196 (314)
T ss_dssp             CCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECT-TSCEEEEEE-EESSEEEEEEEECTTSCEEEEEEEETT
T ss_pred             CcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEee-cCceeEeeC-CcceeeeeEECCCCCcceeEEEEEeec
Confidence            578999999988877432               233444443 344333222 334557899999765     4555567


Q ss_pred             CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC-CCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC
Q psy8430         224 DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGEQVITASWDRVANLFDVET  302 (361)
Q Consensus       224 d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~  302 (361)
                      .+.|..||+.....+                    ........+.+ .......+++.++|+..++....+.|.+||.+.
T Consensus       197 ~~~i~~~d~~~~g~~--------------------~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~  256 (314)
T d1pjxa_         197 TKKLWSYDIKGPAKI--------------------ENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDG  256 (314)
T ss_dssp             TTEEEEEEEEETTEE--------------------EEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTC
T ss_pred             ccceEEeeccCcccc--------------------ceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCCC
Confidence            788888887533111                    01111122222 223456899999999988888889999999998


Q ss_pred             CeEEEEeecCCCCCeEEEEEcCC--Ccc--cCCCeEEEE
Q psy8430         303 GTILQSLTGHDEEPHILCVSSYY--SKV--SCDLFQRIQ  337 (361)
Q Consensus       303 ~~~~~~~~~h~~~v~~~~~s~s~--~~v--~~dg~i~iW  337 (361)
                      ++.+..+..+.....++++.+..  ++|  +.+|.|.-.
T Consensus       257 g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~  295 (314)
T d1pjxa_         257 GQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKF  295 (314)
T ss_dssp             BSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             CEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEE
Confidence            88777777666666666665432  223  245554444

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.41  E-value=0.0015  Score=52.82  Aligned_cols=112  Identities=12%  Similarity=-0.028  Sum_probs=79.8

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCC
Q psy8430         162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNN  241 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~  241 (361)
                      .....++++++|+++++...++.|..++.............-.....|++.++++++++....+.|..++.....     
T Consensus       140 ~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~-----  214 (260)
T d1rwia_         140 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT-----  214 (260)
T ss_dssp             CSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSC-----
T ss_pred             CCcceeeecCCCCEeeeccccccccccccccceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCe-----
Confidence            445789999999988888888899999987554333223455677899999999988888888888888754321     


Q ss_pred             CCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeC
Q psy8430         242 DNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASWDRVANLFDV  300 (361)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~  300 (361)
                                            ...+ ...-.....|+++++|..+++-..++.|+.++.
T Consensus       215 ----------------------~~~~~~~~~~~P~~i~~d~~g~l~vad~~~~rI~~i~~  252 (260)
T d1rwia_         215 ----------------------STVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTS  252 (260)
T ss_dssp             ----------------------CEECCCCSCCCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred             ----------------------EEEEccCCCCCeEEEEEeCCCCEEEEECCCCEEEEEeC
Confidence                                  1111 112245678999999988777666776765554

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.40  E-value=0.025  Score=46.78  Aligned_cols=65  Identities=6%  Similarity=0.032  Sum_probs=51.8

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG  223 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~  223 (361)
                      ...-.+..++|+++|++.++-...+.|..|+..++.....+.........++++++|+++++...
T Consensus        37 ~~~~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~  101 (319)
T d2dg1a1          37 KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLG  101 (319)
T ss_dssp             SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECT
T ss_pred             cCCcCcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecC
Confidence            34445678999999998888888899999998877666666556678899999999998877654

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.36  E-value=0.016  Score=48.11  Aligned_cols=130  Identities=8%  Similarity=-0.043  Sum_probs=82.1

Q ss_pred             CCeEEEEEcCCCCEEEEEeCC------CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEE-EEEECCCcEEEEeccc
Q psy8430         162 DGVWDVAVRPGQPVLGSASAD------RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV-LSASGDKSVHIWQAVI  234 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s~d------~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~~~d~~i~lwd~~~  234 (361)
                      .....+++.++|++.++....      +.+..++...+ .+..+...-...+.++|+|+++.| ++-+..+.|..|++..
T Consensus       130 ~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~-~~~~~~~~~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~  208 (319)
T d2dg1a1         130 YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFR-TVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALED  208 (319)
T ss_dssp             CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSC-CEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred             cCCcceeEEeccceeecccccccccCcceeEEEecccc-eeEEEeeccceeeeeeeccccceEEEecccCCceEEEEEcC
Confidence            347789999999877664321      23544554333 233333234456889999999865 4556678899998753


Q ss_pred             cccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430         235 NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG  311 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~  311 (361)
                      ....                  ....................+++.++|++.++....+.|.+||. .|+.+..+..
T Consensus       209 ~g~~------------------~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~  266 (319)
T d2dg1a1         209 DGVT------------------IQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILI  266 (319)
T ss_dssp             TSSS------------------EEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEEC
T ss_pred             CCce------------------eccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEEeC
Confidence            3110                  00000111111222334678999999999888888999999995 6888887753

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=97.34  E-value=0.0056  Score=50.88  Aligned_cols=114  Identities=11%  Similarity=0.165  Sum_probs=78.6

Q ss_pred             CCeEEEEEcCCCC-----EEEEEeCCCcEEEEeCCCCeEEE------EEeC-CCCCeEEEEEecCCCEEEEEECCCcEEE
Q psy8430         162 DGVWDVAVRPGQP-----VLGSASADRTVRLWSTQTGKCVL------QYSG-HSGSVNSVRFLPNKDLVLSASGDKSVHI  229 (361)
Q Consensus       162 ~~V~~l~~~~~~~-----~l~s~s~d~~i~~wd~~~~~~~~------~~~~-h~~~v~~v~~~~~~~~l~s~~~d~~i~l  229 (361)
                      ..-+.++|+|++.     ++++-+..+.|..|++.....+.      .+.+ .....-.+++..+|++.++....+.|.+
T Consensus       172 ~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~  251 (314)
T d1pjxa_         172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEV  251 (314)
T ss_dssp             SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred             ceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEE
Confidence            3346788988764     55555677889888875432211      1222 2234568999999999888888899999


Q ss_pred             EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEE-EEEeCCCcEEEeeCC
Q psy8430         230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV-ITASWDRVANLFDVE  301 (361)
Q Consensus       230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~d~~v~iwd~~  301 (361)
                      ||...+.                          ....+.......++++|.|+++.| ++.+.++.|..+++.
T Consensus       252 ~dp~~g~--------------------------~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~  298 (314)
T d1pjxa_         252 FGPDGGQ--------------------------PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ  298 (314)
T ss_dssp             ECTTCBS--------------------------CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred             EeCCCCE--------------------------EEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECC
Confidence            9876541                          344455556778899999999755 556667878777764

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=97.15  E-value=0.0068  Score=49.92  Aligned_cols=81  Identities=10%  Similarity=0.055  Sum_probs=61.4

Q ss_pred             CeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCC
Q psy8430         193 GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSN  272 (361)
Q Consensus       193 ~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (361)
                      .+.+..+. -...+..+++.|+|+++++...+++|..|+....                            ...+.....
T Consensus        18 ~~v~~~~p-~~~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~----------------------------~~~~~~~~~   68 (302)
T d2p4oa1          18 AKIITSFP-VNTFLENLASAPDGTIFVTNHEVGEIVSITPDGN----------------------------QQIHATVEG   68 (302)
T ss_dssp             EEEEEEEC-TTCCEEEEEECTTSCEEEEETTTTEEEEECTTCC----------------------------EEEEEECSS
T ss_pred             ccEEEECC-CCCCcCCEEECCCCCEEEEeCCCCEEEEEeCCCC----------------------------EEEEEcCCC
Confidence            34455555 2346889999999999999999999988875432                            223344556


Q ss_pred             cEEEEEEcCCCCEEEEEeCCCcEEEeeCCC
Q psy8430         273 VVIAADWLSDGEQVITASWDRVANLFDVET  302 (361)
Q Consensus       273 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~  302 (361)
                      .+.+++|+++|+++++...++.+..|+...
T Consensus        69 ~~~gla~~~dG~l~v~~~~~~~~~~~~~~~   98 (302)
T d2p4oa1          69 KVSGLAFTSNGDLVATGWNADSIPVVSLVK   98 (302)
T ss_dssp             EEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             CcceEEEcCCCCeEEEecCCceEEEEEecc
Confidence            789999999999999998888888887643

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.0084  Score=52.81  Aligned_cols=152  Identities=13%  Similarity=0.086  Sum_probs=80.4

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe-CCCC-----------------CeEEEEEecCCCEEEE
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSG-----------------SVNSVRFLPNKDLVLS  220 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~-~h~~-----------------~v~~v~~~~~~~~l~s  220 (361)
                      ...+.+....|+|||+.||-.. ++.|.+.+...+..++... +..+                 .-..+-|+|+|+.||.
T Consensus       111 ~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf  189 (465)
T d1xfda1         111 VSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAY  189 (465)
T ss_dssp             CCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEE
T ss_pred             CCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEE
Confidence            3345566688999999888765 5678888887765544332 2111                 1246779999999988


Q ss_pred             EECC-CcEEEEeccccccccCCC-CCCCCCCCCCCCCC----ceec--c------cccEEEeCCCCcEEEEEEcCCCCEE
Q psy8430         221 ASGD-KSVHIWQAVINWECLNND-NDSDLDESKEPDES----SITL--R------TPVKELLGHSNVVIAADWLSDGEQV  286 (361)
Q Consensus       221 ~~~d-~~i~lwd~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~--~------~~~~~~~~~~~~v~~~~~~~~~~~l  286 (361)
                      ...| ..+..+.+.......... ..............    ....  .      .+..........+..+.|+|+++++
T Consensus       190 ~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~  269 (465)
T d1xfda1         190 AAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVA  269 (465)
T ss_dssp             EEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEE
T ss_pred             EEecccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeEE
Confidence            7643 456665543211000000 00000000000000    0000  0      0000011122346788999999876


Q ss_pred             EEEeC-C---CcEEEeeCCCCeEEEEeec
Q psy8430         287 ITASW-D---RVANLFDVETGTILQSLTG  311 (361)
Q Consensus       287 ~s~~~-d---~~v~iwd~~~~~~~~~~~~  311 (361)
                      +.... +   ..+.++|..+|++...+..
T Consensus       270 ~~~~nR~q~~~~i~~~d~~tg~~~~~~~e  298 (465)
T d1xfda1         270 VTWLNRAQNVSILTLCDATTGVCTKKHED  298 (465)
T ss_dssp             EEEEETTSCEEEEEEEETTTCCEEEEEEE
T ss_pred             EEEEccccccceEEEEcCCCCcEEEEEEE
Confidence            66433 2   2478899999988766543

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=96.93  E-value=0.004  Score=50.05  Aligned_cols=96  Identities=14%  Similarity=0.083  Sum_probs=64.4

Q ss_pred             eeccCCCeEEEEEcCCCCEEEEEeCCC-c--EEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC---CCcEEEE
Q psy8430         157 FSGHRDGVWDVAVRPGQPVLGSASADR-T--VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG---DKSVHIW  230 (361)
Q Consensus       157 l~~h~~~V~~l~~~~~~~~l~s~s~d~-~--i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~---d~~i~lw  230 (361)
                      +..+........|+|++..++..+.++ .  +.+.+...+..  ....+........|+|+|+.|+-.+.   ...+.++
T Consensus       166 ~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~  243 (269)
T d2hqsa1         166 ITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV--QVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLV  243 (269)
T ss_dssp             CCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE--EECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEE
T ss_pred             eecccccccccccccccceeEEEeecCCceeeeEeecccccc--eEeecCccccceEECCCCCEEEEEEcCCCCcEEEEE
Confidence            445566677788999999877766554 3  44455554443  33345667788899999998775443   3367888


Q ss_pred             eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC
Q psy8430         231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS  281 (361)
Q Consensus       231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  281 (361)
                      ++..+                           ....+....+.+...+|+|
T Consensus       244 ~~dg~---------------------------~~~~lt~~~g~~~~p~WSP  267 (269)
T d2hqsa1         244 STDGR---------------------------FKARLPATDGQVKFPAWSP  267 (269)
T ss_dssp             ETTSC---------------------------CEEECCCSSSEEEEEEECC
T ss_pred             ECCCC---------------------------CEEEEeCCCCcEEeEEeCC
Confidence            87654                           3445555666777888988

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.92  E-value=0.0055  Score=49.37  Aligned_cols=101  Identities=12%  Similarity=0.099  Sum_probs=62.6

Q ss_pred             EEcCC--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC-CC-----cEEEEecccccccc
Q psy8430         168 AVRPG--QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DK-----SVHIWQAVINWECL  239 (361)
Q Consensus       168 ~~~~~--~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~-----~i~lwd~~~~~~~~  239 (361)
                      ..+|+  |+.++-.+ ++.|.+.|+.+++.. .+..+.+.+...+|+|||+.|+-... ++     .|.+++..++....
T Consensus         5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~~-~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~   82 (281)
T d1k32a2           5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGSTR-KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKR   82 (281)
T ss_dssp             CEEEEEETTEEEEEE-TTEEEEEETTTCCEE-EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEE
T ss_pred             ccCCCCCCCEEEEEe-CCcEEEEECCCCCEE-EEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEE
Confidence            35788  88777654 456888899888764 45557788899999999998875432 22     35555655442211


Q ss_pred             CCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe
Q psy8430         240 NNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS  290 (361)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~  290 (361)
                      -                    ..................|+|+|+.++...
T Consensus        83 l--------------------t~~~~~~~~~~~~~~~~~~spdg~~l~~~~  113 (281)
T d1k32a2          83 I--------------------TYFSGKSTGRRMFTDVAGFDPDGNLIISTD  113 (281)
T ss_dssp             C--------------------CCCCEEEETTEECSEEEEECTTCCEEEEEC
T ss_pred             e--------------------eecCCCccCccccccccccCCCCCEEEEEE
Confidence            0                    001111122233456678999999887653

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.78  E-value=0.071  Score=42.34  Aligned_cols=69  Identities=12%  Similarity=0.169  Sum_probs=47.8

Q ss_pred             eEEeeccCCCeEEEEEcCCCCEEEEEeC-C-----CcEEEEeCCCCeEEEEEe------CCCCCeEEEEEecCCCEEEEE
Q psy8430         154 IRSFSGHRDGVWDVAVRPGQPVLGSASA-D-----RTVRLWSTQTGKCVLQYS------GHSGSVNSVRFLPNKDLVLSA  221 (361)
Q Consensus       154 ~~~l~~h~~~V~~l~~~~~~~~l~s~s~-d-----~~i~~wd~~~~~~~~~~~------~h~~~v~~v~~~~~~~~l~s~  221 (361)
                      .+.|..+.+.+...+|||||+.|+-.+. +     ..|.+++..+++......      ..........|+|+|+.++..
T Consensus        33 ~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~  112 (281)
T d1k32a2          33 TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIIST  112 (281)
T ss_dssp             EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEE
T ss_pred             EEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEeeecCCCccCccccccccccCCCCCEEEEE
Confidence            3457778888999999999998876532 2     247777887776543221      122355788899999988765


Q ss_pred             E
Q psy8430         222 S  222 (361)
Q Consensus       222 ~  222 (361)
                      .
T Consensus       113 ~  113 (281)
T d1k32a2         113 D  113 (281)
T ss_dssp             C
T ss_pred             E
Confidence            3

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.0029  Score=55.85  Aligned_cols=73  Identities=7%  Similarity=-0.065  Sum_probs=52.1

Q ss_pred             CCeEEEEEcCCCCEEEEEe---------CCCcEEEEeCCCCeEEEEEe--CCCCCeEEEEEecCCCEEEEEECCCcEEEE
Q psy8430         162 DGVWDVAVRPGQPVLGSAS---------ADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKSVHIW  230 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l~s~s---------~d~~i~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~~~d~~i~lw  230 (361)
                      -.+....|+|||++++.+.         ..+.+.++|+.++.......  .....+....|+|+|+.+|-.. ++.|.+.
T Consensus        61 ~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~  139 (465)
T d1xfda1          61 LRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYC  139 (465)
T ss_dssp             TTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEE
T ss_pred             cccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEe-cceEEEE
Confidence            4567788999999877663         35678899998886433222  2344566788999999988765 5677777


Q ss_pred             ecccc
Q psy8430         231 QAVIN  235 (361)
Q Consensus       231 d~~~~  235 (361)
                      +...+
T Consensus       140 ~~~~~  144 (465)
T d1xfda1         140 AHVGK  144 (465)
T ss_dssp             SSSSS
T ss_pred             ecCCC
Confidence            76554

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.67  E-value=0.82  Score=36.68  Aligned_cols=102  Identities=9%  Similarity=0.074  Sum_probs=69.7

Q ss_pred             CCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCC------eE--EEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430         162 DGVWDVAVRPGQPVL-GSASADRTVRLWSTQTG------KC--VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  232 (361)
Q Consensus       162 ~~V~~l~~~~~~~~l-~s~s~d~~i~~wd~~~~------~~--~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~  232 (361)
                      ..-+.++|++++..+ ++-+..+.|..++++..      +.  ...+.+..+....+++..+|++.++.-..+.|..||.
T Consensus       148 ~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp  227 (295)
T d2ghsa1         148 SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT  227 (295)
T ss_dssp             SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred             CCcceeeecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC
Confidence            446788999999854 55566788988887421      11  1222344566788999999998888778889999986


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEc-CCCCEEEEEe
Q psy8430         233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL-SDGEQVITAS  290 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~s~~  290 (361)
                      ...                           .+..+......+++++|- |+.+.|+..+
T Consensus       228 ~G~---------------------------~~~~i~lP~~~~T~~~FGG~d~~~LyvTt  259 (295)
T d2ghsa1         228 DGN---------------------------HIARYEVPGKQTTCPAFIGPDASRLLVTS  259 (295)
T ss_dssp             TCC---------------------------EEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred             CCc---------------------------EeeEecCCCCceEEEEEeCCCCCEEEEEE
Confidence            422                           455555555678999995 5666665443

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.10  E-value=0.27  Score=42.18  Aligned_cols=101  Identities=9%  Similarity=0.010  Sum_probs=61.1

Q ss_pred             eEEEEEcCCCCEEEEE-eCCC----cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECC--------------
Q psy8430         164 VWDVAVRPGQPVLGSA-SADR----TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD--------------  224 (361)
Q Consensus       164 V~~l~~~~~~~~l~s~-s~d~----~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d--------------  224 (361)
                      +..++++|++++++-+ +.+|    +++++|+.+|+.+..-. .......++|.++++.|+-...|              
T Consensus       127 ~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i-~~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~~  205 (430)
T d1qfma1         127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTN  205 (430)
T ss_dssp             EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-EEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCC
T ss_pred             ecceEecCCCCEEEEEeccccCchheeEEeccCcceeccccc-ccccccceEEcCCCCEEEEEEeccccCcccccccccC
Confidence            4456789999987744 3333    69999999998654221 11122567899999887654332              


Q ss_pred             --CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC--CCCcEEEEEEcCCCCEEEEE
Q psy8430         225 --KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG--HSNVVIAADWLSDGEQVITA  289 (361)
Q Consensus       225 --~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~  289 (361)
                        ..+..|.+.+...                        .....+..  ....+..+..++++++++..
T Consensus       206 ~~~~v~~h~lgt~~~------------------------~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~  250 (430)
T d1qfma1         206 LHQKLYYHVLGTDQS------------------------EDILCAEFPDEPKWMGGAELSDDGRYVLLS  250 (430)
T ss_dssp             CCCEEEEEETTSCGG------------------------GCEEEECCTTCTTCEEEEEECTTSCEEEEE
T ss_pred             CcceEEEEECCCCcc------------------------ccccccccccCCceEEeeeccCCcceeeEE
Confidence              2466666644311                        12222222  22356677889999988653

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=93.66  E-value=0.49  Score=39.33  Aligned_cols=117  Identities=14%  Similarity=0.117  Sum_probs=72.4

Q ss_pred             eEEEEEcCCCCEEEEEeCCC-----------cEEEEeCCCCeE--EEEE-eCCCCCeEEEEEecCCCEEEEEECC-CcEE
Q psy8430         164 VWDVAVRPGQPVLGSASADR-----------TVRLWSTQTGKC--VLQY-SGHSGSVNSVRFLPNKDLVLSASGD-KSVH  228 (361)
Q Consensus       164 V~~l~~~~~~~~l~s~s~d~-----------~i~~wd~~~~~~--~~~~-~~h~~~v~~v~~~~~~~~l~s~~~d-~~i~  228 (361)
                      +.......+|++++.|+.+.           .+.+||..++.-  .... ..+.......++.+++.+++.|+.+ ..+.
T Consensus        22 ~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~  101 (387)
T d1k3ia3          22 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS  101 (387)
T ss_dssp             SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred             cEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCccee
Confidence            33444566788888777531           367899987642  2222 2344444566788999999988766 5799


Q ss_pred             EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC------CcEEEeeCCC
Q psy8430         229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD------RVANLFDVET  302 (361)
Q Consensus       229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d------~~v~iwd~~~  302 (361)
                      +||..+..-                        .....+..... -.+++..++|+.++.|+.+      ..+.+||..+
T Consensus       102 ~yd~~~~~w------------------------~~~~~~~~~r~-~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~  156 (387)
T d1k3ia3         102 LYDSSSDSW------------------------IPGPDMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS  156 (387)
T ss_dssp             EEEGGGTEE------------------------EECCCCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred             EecCccCcc------------------------ccccccccccc-ccceeeecCCceeeeccccccccccceeeeecCCC
Confidence            999876521                        11111111111 1245567799999988753      3588999987


Q ss_pred             CeE
Q psy8430         303 GTI  305 (361)
Q Consensus       303 ~~~  305 (361)
                      .+-
T Consensus       157 ~~W  159 (387)
T d1k3ia3         157 KTW  159 (387)
T ss_dssp             TEE
T ss_pred             Cce
Confidence            653

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=93.30  E-value=0.88  Score=40.36  Aligned_cols=30  Identities=13%  Similarity=0.257  Sum_probs=26.4

Q ss_pred             CCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430         282 DGEQVITASWDRVANLFDVETGTILQSLTG  311 (361)
Q Consensus       282 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~  311 (361)
                      .+.+++.|+.||.++.+|.++|+.+-++.-
T Consensus       468 agglVF~G~~dg~l~A~Da~tGe~LW~~~l  497 (560)
T d1kv9a2         468 AGNLVFQGTAAGQMHAYSADKGEALWQFEA  497 (560)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             CCCEEEEECCCCcEEEEECCCCcEeEEEEC
Confidence            567888999999999999999999977753

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=93.02  E-value=0.74  Score=40.97  Aligned_cols=30  Identities=20%  Similarity=0.195  Sum_probs=26.6

Q ss_pred             CCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430         282 DGEQVITASWDRVANLFDVETGTILQSLTG  311 (361)
Q Consensus       282 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~  311 (361)
                      .|..+++|+.||.++.+|.++|+.+-.+.-
T Consensus       487 agglVF~G~~dg~l~A~Da~TGe~LW~~~~  516 (573)
T d1kb0a2         487 AGNVVFQGTADGRLVAYHAATGEKLWEAPT  516 (573)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             cCCEEEEECCCCeEEEEECCCCcEeEEEEC
Confidence            677889999999999999999999977753

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=92.50  E-value=2.6  Score=35.52  Aligned_cols=140  Identities=11%  Similarity=0.078  Sum_probs=74.3

Q ss_pred             CCCeEEEEEcC--CCCEEEEEeCCC------------------cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEE
Q psy8430         161 RDGVWDVAVRP--GQPVLGSASADR------------------TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLS  220 (361)
Q Consensus       161 ~~~V~~l~~~~--~~~~l~s~s~d~------------------~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s  220 (361)
                      ...+..+...+  +-.+++.++.+.                  .+.++|..+.+....+. -.+....+.++++|+++++
T Consensus       131 ~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t~ID~~tm~V~~QV~-V~g~ld~~~~s~dGK~af~  209 (459)
T d1fwxa2         131 AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVL-VSGNLDNCDADYEGKWAFS  209 (459)
T ss_dssp             CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEEEEETTTTEEEEEEE-ESSCCCCEEECSSSSEEEE
T ss_pred             CCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEEEEecCCceEEEEee-eCCChhccccCCCCCEEEE
Confidence            34456666544  445777776643                  35678888887776665 3445678899999999888


Q ss_pred             EECCC---------------cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCE
Q psy8430         221 ASGDK---------------SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQ  285 (361)
Q Consensus       221 ~~~d~---------------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  285 (361)
                      .+.+.               .+.++++.....................+............+. -......+.++|||++
T Consensus       210 TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eingV~VVD~~~~~~~~v~~yIP-VpKsPHGV~vSPDGKy  288 (459)
T d1fwxa2         210 TSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIP-IANNPHGCNMAPDKKH  288 (459)
T ss_dssp             EESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGG--CSSEEEEE-EESSCCCEEECTTSSE
T ss_pred             EeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCCceeecccccCCcceeEEEe-cCCCCCceEECCCCCE
Confidence            76542               2445554322221110000000000000000000000111111 1122446789999999


Q ss_pred             EEEEe-CCCcEEEeeCCC
Q psy8430         286 VITAS-WDRVANLFDVET  302 (361)
Q Consensus       286 l~s~~-~d~~v~iwd~~~  302 (361)
                      +++++ -+.++.|+|++.
T Consensus       289 i~VaGKLs~tVSViD~~K  306 (459)
T d1fwxa2         289 LCVAGKLSPTVTVLDVTR  306 (459)
T ss_dssp             EEEECTTSSBEEEEEGGG
T ss_pred             EEEeCCcCCcEEEEEehh
Confidence            87765 478899999964

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.97  E-value=0.78  Score=40.82  Aligned_cols=29  Identities=24%  Similarity=0.262  Sum_probs=25.7

Q ss_pred             CCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430         282 DGEQVITASWDRVANLFDVETGTILQSLT  310 (361)
Q Consensus       282 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~  310 (361)
                      .+..+++|+.|+.++.+|.++|+.+-.+.
T Consensus       474 agglVf~G~~dg~l~A~Da~tGe~lW~~~  502 (571)
T d2ad6a1         474 KGGLVWYATLDGYLKALDNKDGKELWNFK  502 (571)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             cCCEEEEECCCCeEEEEECCCCcEEEEEE
Confidence            56788889999999999999999997775

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=90.05  E-value=3.4  Score=34.80  Aligned_cols=83  Identities=11%  Similarity=0.072  Sum_probs=51.0

Q ss_pred             CCeEEEEEecCCCEEEEEE-CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC
Q psy8430         204 GSVNSVRFLPNKDLVLSAS-GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD  282 (361)
Q Consensus       204 ~~v~~v~~~~~~~~l~s~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  282 (361)
                      .....+..+|||+++++++ .+.++.+.|+.+-.......               ...+..+..-....-.-...+|+..
T Consensus       275 KsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~---------------~~~~~~~~~e~elglgPLht~fd~~  339 (459)
T d1fwxa2         275 NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYEN---------------ADPRSAVVAEPELGLGPLHTAFDGR  339 (459)
T ss_dssp             SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSC---------------C-GGGGEEECCBCCSCEEEEEECTT
T ss_pred             CCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhccc---------------CCccccEEeecccCcCccccccCCC
Confidence            4456788999999977665 58899999987543321100               0111122221222334455678888


Q ss_pred             CCEEEEEeCCCcEEEeeCC
Q psy8430         283 GEQVITASWDRVANLFDVE  301 (361)
Q Consensus       283 ~~~l~s~~~d~~v~iwd~~  301 (361)
                      |.-..+---|..|.-|++.
T Consensus       340 g~aytslfids~v~kw~~~  358 (459)
T d1fwxa2         340 GNAYTSLFLDSQVVKWNIE  358 (459)
T ss_dssp             SEEEEEETTTTEEEEEEHH
T ss_pred             ceEEEEeeccceEEEEecc
Confidence            8555555679999999985

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.03  E-value=6.9  Score=34.35  Aligned_cols=72  Identities=13%  Similarity=-0.042  Sum_probs=45.8

Q ss_pred             EEEcCCCCEEEEEeC----------------CCcEEEEeCCCCeEEEEEeCCCCCe---------EEEEEecCCC---EE
Q psy8430         167 VAVRPGQPVLGSASA----------------DRTVRLWSTQTGKCVLQYSGHSGSV---------NSVRFLPNKD---LV  218 (361)
Q Consensus       167 l~~~~~~~~l~s~s~----------------d~~i~~wd~~~~~~~~~~~~h~~~v---------~~v~~~~~~~---~l  218 (361)
                      .++++...++..+..                ...+...|.++|+.+-.++.+...+         .......++.   .+
T Consensus       240 ~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s~svvAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v  319 (571)
T d2ad6a1         240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLL  319 (571)
T ss_dssp             CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEE
T ss_pred             cccchhcCeeeeecccccCccccccccccccccceeeeeccchhheecccccCccccccccccccceeeeeccCccccce
Confidence            456676665554443                2457778999999887776432211         1122222443   46


Q ss_pred             EEEECCCcEEEEeccccccc
Q psy8430         219 LSASGDKSVHIWQAVINWEC  238 (361)
Q Consensus       219 ~s~~~d~~i~lwd~~~~~~~  238 (361)
                      +.++.+|.+.++|..+++.+
T Consensus       320 ~~~~k~G~l~vlDr~tG~~i  339 (571)
T d2ad6a1         320 SHIDRNGILYTLNRENGNLI  339 (571)
T ss_dssp             EEECTTSEEEEEETTTCCEE
T ss_pred             eeccccceEEEEecCCCcEe
Confidence            67889999999999988764

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.63  E-value=4.4  Score=31.55  Aligned_cols=157  Identities=8%  Similarity=-0.067  Sum_probs=89.9

Q ss_pred             cCCCeEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE-CCCcEEEEecccccc
Q psy8430         160 HRDGVWDVAVRPGQPVLG-SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKSVHIWQAVINWE  237 (361)
Q Consensus       160 h~~~V~~l~~~~~~~~l~-s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~~i~lwd~~~~~~  237 (361)
                      ....+.+++++.-+..|. +-...+.|.+.++........+......+..++++|...++.-.. ..+..+||...... 
T Consensus        77 ~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG-  155 (263)
T d1npea_          77 DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-  155 (263)
T ss_dssp             TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-
T ss_pred             ccccccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCC-
Confidence            345688999987555554 555677999999876544333333446789999999766655333 32344455332110 


Q ss_pred             ccCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEE-eCCCcEEEeeCCCCeEEEEeecCCCC
Q psy8430         238 CLNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITA-SWDRVANLFDVETGTILQSLTGHDEE  315 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~-~~d~~v~iwd~~~~~~~~~~~~h~~~  315 (361)
                                              .....+ ...-....++++++.++.|+-+ ...+.|...|+........+.+... 
T Consensus       156 ------------------------~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~~~~~~-  210 (263)
T d1npea_         156 ------------------------TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQY-  210 (263)
T ss_dssp             ------------------------CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCS-
T ss_pred             ------------------------CCceeeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEECCCCC-
Confidence                                    011122 2233466889999888877665 4567898899875444333333222 


Q ss_pred             CeEEEEEcCCCccc--CCCeEEEEcCCCCCC
Q psy8430         316 PHILCVSSYYSKVS--CDLFQRIQHLDCGTS  344 (361)
Q Consensus       316 v~~~~~s~s~~~v~--~dg~i~iW~~d~~~~  344 (361)
                      ...+.+-++.++++  ..+.|...  |..++
T Consensus       211 P~~lav~~~~lYwtd~~~~~I~~~--~~~~g  239 (263)
T d1npea_         211 PFAVTSYGKNLYYTDWKTNSVIAM--DLAIS  239 (263)
T ss_dssp             EEEEEEETTEEEEEETTTTEEEEE--ETTTT
T ss_pred             cEEEEEECCEEEEEECCCCEEEEE--ECCCC
Confidence            23444444444443  45555555  66443

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.61  E-value=1.7  Score=38.64  Aligned_cols=31  Identities=26%  Similarity=0.353  Sum_probs=27.1

Q ss_pred             CCCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430         281 SDGEQVITASWDRVANLFDVETGTILQSLTG  311 (361)
Q Consensus       281 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~  311 (361)
                      ..|..+++|+.||.++.+|.+||+.+-++.-
T Consensus       495 tagglVF~Gt~dg~l~A~Da~TGe~LW~~~~  525 (582)
T d1flga_         495 TAGNLVFTGTGDGYFKAFDAKSGKELWKFQT  525 (582)
T ss_dssp             ETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             EcCCeEEEeCCCCeEEEEECCCCcEeEEEEC
Confidence            3677888999999999999999999987763

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=88.58  E-value=2.6  Score=37.47  Aligned_cols=30  Identities=23%  Similarity=0.294  Sum_probs=26.5

Q ss_pred             CCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430         282 DGEQVITASWDRVANLFDVETGTILQSLTG  311 (361)
Q Consensus       282 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~  311 (361)
                      .|..++.|+.||.++.+|.+||+.+-++.-
T Consensus       483 agglVF~G~~Dg~l~A~Da~TGe~LW~~~~  512 (596)
T d1w6sa_         483 AGDLVFYGTLDGYLKARDSDTGDLLWKFKI  512 (596)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             cCCEEEEECCCCeEEEEECCCCcEeeEEEC
Confidence            577888999999999999999999977753

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=87.66  E-value=7.3  Score=33.00  Aligned_cols=56  Identities=11%  Similarity=0.138  Sum_probs=40.6

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE--EEe------CCCCCeEEEEEecC
Q psy8430         159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL--QYS------GHSGSVNSVRFLPN  214 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~--~~~------~h~~~v~~v~~~~~  214 (361)
                      ..-..-++|+|.|+|++|++--..|.|++++..++....  .+.      .-.+....|+|+|+
T Consensus        24 ~~L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          24 SNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             CCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CCCCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence            344678899999999988887668999999987775432  221      11256789999994

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.40  E-value=6.4  Score=32.53  Aligned_cols=104  Identities=9%  Similarity=-0.064  Sum_probs=66.4

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCC
Q psy8430         163 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNND  242 (361)
Q Consensus       163 ~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~  242 (361)
                      .|..++|+.+  .|+.. .++.+..++...-........-..++..+.++|.  .++....++.+.++++..+..     
T Consensus        88 ~v~~vafs~d--~l~v~-~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~-----  157 (381)
T d1xipa_          88 DVIFVCFHGD--QVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKST-----  157 (381)
T ss_dssp             TEEEEEEETT--EEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCE-----
T ss_pred             CeEEEEeeCC--EEEEE-eCCCEEEEEeeccccccccccccccccceecCCc--eeEEEecCCCEEEEEeccCcc-----
Confidence            5888999865  44444 4456778887654433343334567888888764  677778899999998865521     


Q ss_pred             CCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy8430         243 NDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD  292 (361)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d  292 (361)
                                     ......+..+.. .+.+.+++|++.|..++++..+
T Consensus       158 ---------------~~~~~~v~~~~~-~~~~~~v~ws~kgkq~v~~~g~  191 (381)
T d1xipa_         158 ---------------KQLAQNVTSFDV-TNSQLAVLLKDRSFQSFAWRNG  191 (381)
T ss_dssp             ---------------EEEEESEEEEEE-CSSEEEEEETTSCEEEEEEETT
T ss_pred             ---------------ccccCCcceEEe-cCCceEEEEeCCcEEEEEeCCC
Confidence                           001111111221 3568889999999999888543

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.81  E-value=5.7  Score=30.87  Aligned_cols=159  Identities=11%  Similarity=-0.066  Sum_probs=91.4

Q ss_pred             ccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEE-EEEE-CCCcEEEEecccc
Q psy8430         159 GHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV-LSAS-GDKSVHIWQAVIN  235 (361)
Q Consensus       159 ~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~~-~d~~i~lwd~~~~  235 (361)
                      .....+..+++++.+. +..+-...+.|.+.++........+.........++.+|...++ ++-. ..+.|.-.++...
T Consensus        74 ~~~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs  153 (266)
T d1ijqa1          74 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV  153 (266)
T ss_dssp             SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred             CCCCCcceEEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCC
Confidence            3345677899987555 44444566789999997666555555566778999999855444 4432 2234444444221


Q ss_pred             ccccCCCCCCCCCCCCCCCCCceecccccEEEe-CCCCcEEEEEEcCCCCEEEEE-eCCCcEEEeeCCCCeEEEEeecCC
Q psy8430         236 WECLNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITA-SWDRVANLFDVETGTILQSLTGHD  313 (361)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~-~~d~~v~iwd~~~~~~~~~~~~h~  313 (361)
                                                 ....+. ..-....++++++.++.|+-+ ...+.|...|+.............
T Consensus       154 ---------------------------~~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~  206 (266)
T d1ijqa1         154 ---------------------------DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK  206 (266)
T ss_dssp             ---------------------------CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTT
T ss_pred             ---------------------------ceecccccccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCCC
Confidence                                       122222 233567889999888777666 456788888886544333333222


Q ss_pred             --CCCeEEEEEcCCCccc--CCCeEEEEcCCCCCCCC
Q psy8430         314 --EEPHILCVSSYYSKVS--CDLFQRIQHLDCGTSEN  346 (361)
Q Consensus       314 --~~v~~~~~s~s~~~v~--~dg~i~iW~~d~~~~~~  346 (361)
                        .....+.+-++.++++  .++.|.-.  +..++..
T Consensus       207 ~~~~p~~lav~~~~ly~td~~~~~I~~~--~~~~g~~  241 (266)
T d1ijqa1         207 RLAHPFSLAVFEDKVFWTDIINEAIFSA--NRLTGSD  241 (266)
T ss_dssp             TTSSEEEEEEETTEEEEEETTTTEEEEE--ETTTCCC
T ss_pred             cccccEEEEEECCEEEEEECCCCeEEEE--ECCCCcc
Confidence              1223333334433332  56676666  6544433

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=86.65  E-value=7.2  Score=34.12  Aligned_cols=57  Identities=11%  Similarity=0.063  Sum_probs=36.0

Q ss_pred             CcEEEEeCCCCeEEEEEeCCCCCeE---------EEEEecCCC---EEEEEECCCcEEEEecccccccc
Q psy8430         183 RTVRLWSTQTGKCVLQYSGHSGSVN---------SVRFLPNKD---LVLSASGDKSVHIWQAVINWECL  239 (361)
Q Consensus       183 ~~i~~wd~~~~~~~~~~~~h~~~v~---------~v~~~~~~~---~l~s~~~d~~i~lwd~~~~~~~~  239 (361)
                      ..|...|+++|+.+-.++.....+.         -+....++.   .++.++.+|.+.++|..+++.+.
T Consensus       270 ~sivAld~~tG~~~W~~Q~~~~D~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i~  338 (560)
T d1kv9a2         270 SSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLIS  338 (560)
T ss_dssp             TEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEE
T ss_pred             eeeEEecCCccceeEEEeccccccccccccceeeeeeeecCCceeeeeeecCccceEEEEecCCCcccc
Confidence            3566778899988776653222221         112222333   56778899999999998886643

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.54  E-value=10  Score=30.16  Aligned_cols=147  Identities=16%  Similarity=0.130  Sum_probs=88.4

Q ss_pred             eeeEEeeccC----CCeEEEEEcCCCCEEEEEe-------CCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC--C-CE
Q psy8430         152 YKIRSFSGHR----DGVWDVAVRPGQPVLGSAS-------ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN--K-DL  217 (361)
Q Consensus       152 ~~~~~l~~h~----~~V~~l~~~~~~~~l~s~s-------~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~--~-~~  217 (361)
                      .+.+.+.-|.    ..|..-..++++++++..|       -.|.+.+|..+.+. .+.+.||.+.-..+...-+  . ++
T Consensus       134 ~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~l  212 (327)
T d1utca2         134 QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTL  212 (327)
T ss_dssp             CCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEEEEEEECCTTCSSCEEE
T ss_pred             CchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCc-CccccceeeeeEEEEcCCCCCCceE
Confidence            4566665554    3466667788888665543       23678899986543 4567777554444433211  1 12


Q ss_pred             EEEE---ECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE----eCCCCcEEEEEEcCCCCEEEEEe
Q psy8430         218 VLSA---SGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL----LGHSNVVIAADWLSDGEQVITAS  290 (361)
Q Consensus       218 l~s~---~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~s~~  290 (361)
                      |+-+   ...+++++-++.....-.                  ....+....+    ..-.+...++.+++....++.-+
T Consensus       213 f~fa~r~~~~~kLhIiEig~~~~g~------------------~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviT  274 (327)
T d1utca2         213 FCFAVRGQAGGKLHIIEVGTPPTGN------------------QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT  274 (327)
T ss_dssp             EEEEEEETTEEEEEEEECSCCCTTC------------------CCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEE
T ss_pred             EEEEECCCCCcEEEEEEcCCCccCC------------------CCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEe
Confidence            3222   233678888876531100                  0000011111    11235567889999999999999


Q ss_pred             CCCcEEEeeCCCCeEEEEeecCCCCCe
Q psy8430         291 WDRVANLFDVETGTILQSLTGHDEEPH  317 (361)
Q Consensus       291 ~d~~v~iwd~~~~~~~~~~~~h~~~v~  317 (361)
                      .-|.+++||++|+.++..-.-....|.
T Consensus       275 K~G~i~lyDleTgt~i~~nRIs~~~iF  301 (327)
T d1utca2         275 KYGYIHLYDLETGTCIYMNRISGETIF  301 (327)
T ss_dssp             TTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred             cCcEEEEEEcccccEEEEeecCCCceE
Confidence            999999999999999887665555554

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.43  E-value=4.1  Score=36.01  Aligned_cols=55  Identities=20%  Similarity=0.232  Sum_probs=39.6

Q ss_pred             CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccc
Q psy8430         183 RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC  238 (361)
Q Consensus       183 ~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~  238 (361)
                      |.|.-+|+.+|+.+-....+ .++..-..+..+.++++|+.||.++-+|..+++++
T Consensus       466 G~l~AiD~~TG~i~W~~~~~-~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~L  520 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKEL  520 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred             CeEEEEcCCCCcEEeecCCC-CCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEe
Confidence            57888899999887776632 22222223346778888999999999999998653

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=81.18  E-value=8.6  Score=31.12  Aligned_cols=37  Identities=19%  Similarity=0.331  Sum_probs=27.2

Q ss_pred             CCCcEEEEEEcCCCCEEEEEeCC-CcEEEeeCCCCeEE
Q psy8430         270 HSNVVIAADWLSDGEQVITASWD-RVANLFDVETGTIL  306 (361)
Q Consensus       270 ~~~~v~~~~~~~~~~~l~s~~~d-~~v~iwd~~~~~~~  306 (361)
                      +.....+.++.++|.+++.|+.+ ..+.+||..+....
T Consensus        74 ~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w~  111 (387)
T d1k3ia3          74 HDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWI  111 (387)
T ss_dssp             CCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEE
T ss_pred             cccceeEEEEecCCcEEEeecCCCcceeEecCccCccc
Confidence            33334456788999999998766 57999999876543

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.55  E-value=11  Score=29.15  Aligned_cols=108  Identities=8%  Similarity=-0.082  Sum_probs=70.1

Q ss_pred             eeccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEE-EEECCCcEEEEeccc
Q psy8430         157 FSGHRDGVWDVAVRPGQPVLGSA-SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIWQAVI  234 (361)
Q Consensus       157 l~~h~~~V~~l~~~~~~~~l~s~-s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~~i~lwd~~~  234 (361)
                      +..+...+..++|++..+.|.-+ ..++.|...++..+.....+..-...+.++++..-+..|. +-...+.|.+.++..
T Consensus        31 ~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg  110 (263)
T d1npea_          31 LHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG  110 (263)
T ss_dssp             EEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             cccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEecCC
Confidence            34455568889999876655554 5567898888876654444444446789999987566555 445567899988754


Q ss_pred             cccccCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEeC
Q psy8430         235 NWECLNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASW  291 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~  291 (361)
                      ..                           ...+ ...-.....++++|...+++-...
T Consensus       111 ~~---------------------------~~~l~~~~l~~p~~l~vdp~~g~ly~t~~  141 (263)
T d1npea_         111 TQ---------------------------RRVLFDTGLVNPRGIVTDPVRGNLYWTDW  141 (263)
T ss_dssp             CS---------------------------CEEEECSSCSSEEEEEEETTTTEEEEEEC
T ss_pred             ce---------------------------EEEEecccccCCcEEEEecccCcEEEeec
Confidence            31                           1122 222356788899987777765543